Lsi08G016350 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi08G016350
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr08 : 24238777 .. 24239668 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAATTCAGCACATGTAGTTTCGTAGCATCAGATTATTTCTCGAAGAGATCTATTCCTCTCCAACTTCTGCTCCTGGCATTGTTCTTCTTCTGAGTTTCTGCGTCGCGTTTTTTCGATCATTCTGCCGAATTATATTCTGTAGAAGAGACGAGCTTCTCAAGTTGTAGAGAAGAAGATGGTGAAAGTAGCGACGTTCTTTGCAATGTCGTTGGGGGCCTTCATGTTCTGGCAGTCAATGGATAAACTCCATGTTTGGATCGCTCTCCGTCAAGACGAAAAGGTTCTCTTTCAATTCCCCCCTTCAGATTTCTCTAATTGTATCGTATTTTTCATTTCACTCTCCTTATAGTTATTTCTTCAATTGATGCCTACTTCTTCATAGAAGAGTGGGAAAAAAGAAAACCCTAGGTGGCAACGTTTCCCCAGCTTATTCCTTGATATCTTTAGCTTTGAATGCGATATCTTATATAACTTTTGGAATGTAAATTGTAAATGTTTATAAGTCATCTCTGTGTTCCGCTTTGCTGTTTCAGAAAGAGAGGTTGGAAAGGGAAGCAGAGATCAGAAGAGTTAGAGAAGAGCTACTGCAACAAGCGAAACAGAACGACTCTCTTGCTTGACTCTTCCCTTTTCTTCACCGGTGGCCTTCCCTCCTCTTTTTATTTTTCCTTCCTTTCTGTTGCTGCTATCGGTATTGAATCGATAAGTTTAGATTGACATTTTATAAGTATCGTTTGTCTGTTCTAGAACAATGATAATAGGGTGGCCTATAAATGGTTGATTACTCATTTCTATAATTGTTATGGTTATCAATTGGTAAACAATGCTCATTTCAGTTTGGAGCTTTGCTTTTGAATAATTGAATTTGCATCATGATTCAGTTTGCCAAAA

mRNA sequence

CAAATTCAGCACATGTAGTTTCGTAGCATCAGATTATTTCTCGAAGAGATCTATTCCTCTCCAACTTCTGCTCCTGGCATTGTTCTTCTTCTGAGTTTCTGCGTCGCGTTTTTTCGATCATTCTGCCGAATTATATTCTGTAGAAGAGACGAGCTTCTCAAGTTGTAGAGAAGAAGATGGTGAAAGTAGCGACGTTCTTTGCAATGTCGTTGGGGGCCTTCATGTTCTGGCAGTCAATGGATAAACTCCATGTTTGGATCGCTCTCCGTCAAGACGAAAAGAAAGAGAGGTTGGAAAGGGAAGCAGAGATCAGAAGAGTTAGAGAAGAGCTACTGCAACAAGCGAAACAGAACGACTCTCTTGCTTGACTCTTCCCTTTTCTTCACCGGTGGCCTTCCCTCCTCTTTTTATTTTTCCTTCCTTTCTGTTGCTGCTATCGGTATTGAATCGATAAGTTTAGATTGACATTTTATAAGTATCGTTTGTCTGTTCTAGAACAATGATAATAGGGTGGCCTATAAATGGTTGATTACTCATTTCTATAATTGTTATGGTTATCAATTGGTAAACAATGCTCATTTCAGTTTGGAGCTTTGCTTTTGAATAATTGAATTTGCATCATGATTCAGTTTGCCAAAA

Coding sequence (CDS)

ATGTTTGGATCGCTCTCCGTCAAGACGAAAAGAAAGAGAGGTTGGAAAGGGAAGCAGAGATCAGAAGAGTTAGAGAAGAGCTACTGCAACAAGCGAAACAGAACGACTCTCTTGCTTGACTCTTCCCTTTTCTTCACCGGTGGCCTTCCCTCCTCTTTTTATTTTTCCTTCCTTTCTGTTGCTGCTATCGGTATTGAATCGATAAGTTTAGATTGA

Protein sequence

MFGSLSVKTKRKRGWKGKQRSEELEKSYCNKRNRTTLLLDSSLFFTGGLPSSFYFSFLSVAAIGIESISLD
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0005747 mitochondrial respiratory chain complex I
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G016350.1Lsi08G016350.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi08G016350CmaCh12G000410Cucurbita maxima (Rimu)cmalsiB188
Lsi08G016350Cp4.1LG07g00270Cucurbita pepo (Zucchini)cpelsiB691
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi08G016350Cucumber (Gy14) v1cgylsiB637
Lsi08G016350Cucurbita maxima (Rimu)cmalsiB394
Lsi08G016350Cucurbita maxima (Rimu)cmalsiB397
Lsi08G016350Cucurbita maxima (Rimu)cmalsiB704
Lsi08G016350Cucurbita maxima (Rimu)cmalsiB739
Lsi08G016350Cucurbita moschata (Rifu)cmolsiB178
Lsi08G016350Cucurbita moschata (Rifu)cmolsiB698
Lsi08G016350Cucurbita moschata (Rifu)cmolsiB731
Lsi08G016350Cucurbita pepo (Zucchini)cpelsiB045
Lsi08G016350Cucurbita pepo (Zucchini)cpelsiB100
Lsi08G016350Cucurbita pepo (Zucchini)cpelsiB383
Lsi08G016350Wild cucumber (PI 183967)cpilsiB083
Lsi08G016350Wild cucumber (PI 183967)cpilsiB141
Lsi08G016350Wild cucumber (PI 183967)cpilsiB392
Lsi08G016350Cucumber (Chinese Long) v2culsiB085
Lsi08G016350Cucumber (Chinese Long) v2culsiB142
Lsi08G016350Cucumber (Chinese Long) v2culsiB388
Lsi08G016350Melon (DHL92) v3.5.1lsimeB462
Lsi08G016350Melon (DHL92) v3.5.1lsimeB465
Lsi08G016350Melon (DHL92) v3.5.1lsimeB469
Lsi08G016350Watermelon (Charleston Gray)lsiwcgB433
Lsi08G016350Watermelon (Charleston Gray)lsiwcgB436
Lsi08G016350Watermelon (Charleston Gray)lsiwcgB438
Lsi08G016350Watermelon (97103) v1lsiwmB465
Lsi08G016350Watermelon (97103) v1lsiwmB483
Lsi08G016350Watermelon (97103) v1lsiwmB498
Lsi08G016350Cucumber (Gy14) v2cgyblsiB129
Lsi08G016350Melon (DHL92) v3.6.1lsimedB481
Lsi08G016350Melon (DHL92) v3.6.1lsimedB484
Lsi08G016350Melon (DHL92) v3.6.1lsimedB489
Lsi08G016350Silver-seed gourdcarlsiB219
Lsi08G016350Silver-seed gourdcarlsiB454
Lsi08G016350Silver-seed gourdcarlsiB568
Lsi08G016350Cucumber (Chinese Long) v3cuclsiB096
Lsi08G016350Cucumber (Chinese Long) v3cuclsiB155
Lsi08G016350Watermelon (97103) v2lsiwmbB438
Lsi08G016350Watermelon (97103) v2lsiwmbB444
Lsi08G016350Bottle gourd (USVL1VR-Ls)lsilsiB149