Lsi08G015970 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi08G015970
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr08 : 23942585 .. 23944379 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGTCTACTCTTCAAGTTCATGCATGATTGCCCACATGGCTGCATCAACAGAAAGTAAGACATGTCTCATGCTCAAATTGCACTCTTTTTTTTTCATTTTTTCCCTCTCTTTTCAAGATTTGTTTGTTAATTATTAGTGTTATCTTACCAAACCCAGCTTTTAATCTTTTGATATTTGGTGCAGATTTGTGTAGAGAAGTCATTTGATTGAATGATAATGCTATGATTTGTAGGCGTTAAAACTACAGTTTTGCTTTGCTTTGCTTCCTTAAATCCCACAAATTTTGGTTTTTTTCTAAACTTTTTTTGGTTGGTGTCTTCTTCTTTGAAGCTCTAATCCTTGTGTTCTGTTGCATAATCATTAGCTAAATCTAAATCTTTTGTGAAATCAATAATCCACCCTCCTTGATAATTGGGAGTTCATTTAGTATGATTATGTTGTTGAGTTTAAATTAAGCATGTTCTAATTTATAAACAGTGAATATGATAAAAAAATAAGAAAAAATTTTAGTAATGCAATTTGAATAATTCTGATGGTTTTTGAGATGGAGTGTGGAATGAAAAATGAATAGACCCTTCATCATGAAGCCCAAAACTTCGCTGACTAATTTGCTAAGTTCTCGTTTGATAATCATATGATTTTTAATATTTGAAAATTAAGTTTATACTAGCTACTTCGACCATAAATTTTGACATTTTGTCATCCACTTTCTACTCGTTTCAAAAAACCTAGTCAAGTTTAATTTTTTTTTTTTTTTAAAAAAGTAGTTTTCGAAAACTTATTAATATTTTTAGAATTTGATCAAGAATTCAAATGCTTCCTTAAGATAGGTGAAAACCAGAATAAAAAAGTTGAAAGGAAACAAACATAAATTTCAAAGACAGAAAACTAAAAACGAAATTGTTATTAAACGGGACTCAAATAATCTAATCTTCCCACCATTTTAACTAGTATGAGAAATCGACCAAATCAATCCAATTGAATCGATTTATTTAAACTTCATATTTGATAAGTATTTGGTATTTTAGTTTTCAAAAATTTTATTTATTTTCTTACCATTTCTTTACAATAGTTTTTATTTCACTCCAGAAAACATTTAAATTTATAGCGTAATTCTAAAAAATAGAAAATATATTTTTAAGTAGTGGATTACATAAAACAAAAAAAGTGTATAAATGAAAGTAATGTATGTAAGCTTAATTTTCAATTAAATGATTATCAAATGAAGTATTTGCTAAGATAGTGACAAATATTAATAAAAGATGTTATTTTGATGATATGATTAATATTTATTCTAATTATTTCGAACATGATTCTTTTCTAGTTGATATTTGTTAACCTTTCTTGATGTGATGTAATACTCTAAAAACAGCCAAAATTCCCAAGCAAGAACTTATAGTAAATAACTAGAATATTATTATAAACAAATAATGAACTTTTTACTTTACAAATATTCAACTTGTATGAATAACCAAAGCATAGTTCAACGGAATTCAAGTAGATATAAAAAAGAATTCTTCAAAATTTAGGTTGGTTAGTCGATAATTGTAAGGTGATCGGCCGCCCTCTTCCGCCACCACCACAACTTCTGCACGACATCCGACCCGACCCGGAACATGATCGGCACCCAACATCTCCATCCGACCACCGGGCACATAGGCATGTGACCCGACCCGTGCCATTACAAGCCGGACACCTCGGCATCATCCCGGCCGTCGGTAGTTTCTGTTCGATGACGGACTTCACCACCACGGCGCCGGCCAGCACGCTCAGGCCGGTGGCAAGCTGA

mRNA sequence

ATGAAAAGTTGGTTAGTCGATAATTGTAAGGTGATCGGCCGCCCTCTTCCGCCACCACCACAACTTCTGCACGACATCCGACCCGACCCGGAACATGATCGGCACCCAACATCTCCATCCGACCACCGGGCACATAGGCATGTGACCCGACCCGTGCCATTACAAGCCGGACACCTCGGCATCATCCCGGCCGTCGGTAGTTTCTGTTCGATGACGGACTTCACCACCACGGCGCCGGCCAGCACGCTCAGGCCGGTGGCAAGCTGA

Coding sequence (CDS)

ATGAAAAGTTGGTTAGTCGATAATTGTAAGGTGATCGGCCGCCCTCTTCCGCCACCACCACAACTTCTGCACGACATCCGACCCGACCCGGAACATGATCGGCACCCAACATCTCCATCCGACCACCGGGCACATAGGCATGTGACCCGACCCGTGCCATTACAAGCCGGACACCTCGGCATCATCCCGGCCGTCGGTAGTTTCTGTTCGATGACGGACTTCACCACCACGGCGCCGGCCAGCACGCTCAGGCCGGTGGCAAGCTGA

Protein sequence

MKSWLVDNCKVIGRPLPPPPQLLHDIRPDPEHDRHPTSPSDHRAHRHVTRPVPLQAGHLGIIPAVGSFCSMTDFTTTAPASTLRPVAS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G015970.1Lsi08G015970.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi08G015970CsGy2G017800Cucumber (Gy14) v2cgyblsiB129
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi08G015970Watermelon (97103) v2lsiwmbB444
Lsi08G015970Wax gourdlsiwgoB591
Lsi08G015970Wax gourdlsiwgoB620
Lsi08G015970Bottle gourd (USVL1VR-Ls)lsilsiB149
Lsi08G015970Cucumber (Gy14) v1cgylsiB077
Lsi08G015970Cucumber (Gy14) v1cgylsiB637
Lsi08G015970Cucurbita maxima (Rimu)cmalsiB188
Lsi08G015970Cucurbita maxima (Rimu)cmalsiB394
Lsi08G015970Cucurbita maxima (Rimu)cmalsiB704
Lsi08G015970Cucurbita maxima (Rimu)cmalsiB739
Lsi08G015970Cucurbita moschata (Rifu)cmolsiB178
Lsi08G015970Cucurbita moschata (Rifu)cmolsiB380
Lsi08G015970Cucurbita moschata (Rifu)cmolsiB698
Lsi08G015970Cucurbita moschata (Rifu)cmolsiB731
Lsi08G015970Cucurbita pepo (Zucchini)cpelsiB045
Lsi08G015970Cucurbita pepo (Zucchini)cpelsiB100
Lsi08G015970Cucurbita pepo (Zucchini)cpelsiB383
Lsi08G015970Cucurbita pepo (Zucchini)cpelsiB689
Lsi08G015970Cucurbita pepo (Zucchini)cpelsiB691
Lsi08G015970Wild cucumber (PI 183967)cpilsiB141
Lsi08G015970Wild cucumber (PI 183967)cpilsiB392
Lsi08G015970Cucumber (Chinese Long) v2culsiB142
Lsi08G015970Cucumber (Chinese Long) v2culsiB388
Lsi08G015970Melon (DHL92) v3.5.1lsimeB462
Lsi08G015970Melon (DHL92) v3.5.1lsimeB465
Lsi08G015970Melon (DHL92) v3.5.1lsimeB469
Lsi08G015970Watermelon (Charleston Gray)lsiwcgB436
Lsi08G015970Watermelon (Charleston Gray)lsiwcgB438
Lsi08G015970Watermelon (97103) v1lsiwmB465
Lsi08G015970Watermelon (97103) v1lsiwmB498
Lsi08G015970Cucumber (Gy14) v2cgyblsiB356
Lsi08G015970Melon (DHL92) v3.6.1lsimedB481
Lsi08G015970Melon (DHL92) v3.6.1lsimedB484
Lsi08G015970Melon (DHL92) v3.6.1lsimedB489
Lsi08G015970Silver-seed gourdcarlsiB164
Lsi08G015970Silver-seed gourdcarlsiB568
Lsi08G015970Silver-seed gourdcarlsiB630
Lsi08G015970Cucumber (Chinese Long) v3cuclsiB155
Lsi08G015970Cucumber (Chinese Long) v3cuclsiB413