Lsi08G015280 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi08G015280
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionHistone acetyltransferase type B subunit 2
Locationchr08 : 23332355 .. 23338008 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGGAGTTGGGCCAAACCGTCTCTGAAGTTTGGATCTGGTAGCCCTAATCACACGGAAGCCCAAAGCGATCGTCGTTCTTCTCTCCGAAGTCCCAATAATAATTGAGAGAGAGAGATAACGAAGAAGGAAGGATTAAGGAATAGAGCCAGCACCGGATCAAGAGGAAGGAACAGTGGGTGGGAGGAGAATAAACCTGAAGAAGCTTCAATTGGTGGCCTCCGAATTGGGGTTGCAGAGCGCCGTTCATATCCTTGGACTTCATAGCTTTCCAGCGCTGTGTCTGAAGGAATCAAGTGGGGAAGATACTGTTGCAGAAAATAGATAGAGACAGAGAGGAAGATACAGCGTTTTTGCATGAGGGCAAAGATGCTTGGAGAATGTGGAAGGATATTAGAGATAGAGAAGCGGGGAAACTCCGCCCAAATTCTTTCGCAAATCGTGTTAAATCCGATCGAACCAGCTCTCTGCAACTTTCCAATCACAAGGACATTGTCTCTCCCCATAGAGGTTCCGTCAACTCACTTCAGGTAATCATGGATCCCTTTCTTATTCCATTTTCAAACAATTTGGATTTTAATGGATTCAAGTGAATGAAGTTGGAAATTGTTCGATTATACTTTCTTTCTGGGTGGAATTTAGATCTTCTCGTCGCTAAACTATTATTTTTTTGGCCATGTCGAATTCTTTTGGGGGTGTTATTTATTTGCTGTTATTAGTGGATTGTAAATTGACTATTTCTGCCTGTAATCGCACGCTTCTCATGATTAATTACGCTCTTCGGGCTGCATTCTTTTTTGCTAATTTCAACGCGAAAAAGGAAAGGCGAAGTTTGGTTTGCGGATTTTCATTTAGTATTGTGACCTACAACAGAAACCTAAAAGCTTCAAACATGTGTAGCTGGAATTCTAGCTTCTAACAGTGTAGTTGGAATTTGATGTTGTCGGTTGACGGTGGAAGATCCAAAACCAGAAGGGAAAATAGCCACTGTTCTCTCTTTTTTTTCTTCTTATGAGAAGGAGCTAAGGATATGATACCACGAAGCTTGAGCCAGGAGAGGCAGAAGAGACTGAGAGAACAAAAGAAGTTAGAAAGCGGTGACTGAGTTAAGATGCCCGAGGACAAATTATATTTAAATAGACAAAGTTTATAACAAATCCACAAAAATGGCAGCATATGAAAGGTAAATTAACATAACAGAAAGTAAGGATCACAAGGGGCCGATATACATGAAGATAGAAAATATAAAATGAAATAGAAGTTGTAGTAAAATCTCCCTGAAATGGTTGTCGAACACTTCAACGTGTTAATAAGGTCTTGATAAGGTAGTTGTATGACTTTATGTTCTTCATTCTGTTCTCCTAAGCCAGTATCAGGAGTTGGGATACCCTCTATGGAACGTTGAATGTAAAGAATTTTTCATTTTGGAACTCTCTAAAGCTACTGAGTTTGTAATTGGATTTAGTTGTTTACTTTTGGAAAAAAAGAACAGAAAAAAAGGCTCTATCACGAACCAAATGGAGAACTACAAAGGATAAGTCTATGGAGGAACTTGAAATCCCTTCTGGTACTCCAATTGTCCAATGAAAATATGAACTGAATTTGTTGCATCATATAGATTACTGGAGTAATAATATTTTCTATTTTTCATTTACCCTGCAGAATTAGCTTAATGTTGTACTTTTTCTTAATCTTGGTTTCAGTATATGTCATGCATAGGAAGGAAAATTTTCGAACAGATGCCATAAAGAGCAATCTTTAGTAAGCATTTTATCTGATTGACATTCGTGTGTTTTTTTAAAAAAATATAATTATGGTTCTGTTCATAATTCTATTAATATATTTTATTTTTATTTTACCTCATTTGTTTCCTCTGAATTTCAACATTCTTCTAGGTCGAGTATGGTCTTGTAGCCCAACCACCATGGTTGGCCCAATGGTCAAAGAAGCAAAAATTGTAAAGCTAGATGGTCTTTGAGGTCATGGGTTTAAACCATGGTGGCTCGTGGGATATGAAATATTCTATGAGTTCTTGACATCAAATATTGTAGAGCCAAGCACATTGTGCCTGAGAGTAGTCAAGGCGCATGTAAGTTGGCTTGAACATTTGCGGTTATTAAAAAAAAGTTTGGTGTTGTAGAGCTAATTGAGCGTTTGAATGTTACTAGCTTGATTTTTGTTTGATTTCATTCTCTAGTAGGTATGTCTTGTTCAGATTTCATAACATGCTTATAAAACTAATAAGAACAACTAGCACCGACATTCTGGGTCATGAAATCAGGTTGATTTGACAGAGGGGAGATATTTGTTATCTGGAGCATCAGATGCATCGGCTGCTGTTTTTGATATTCAACGTGCAACTCATTCCGAGGGCCTTATTGCAAAGCACCAATGCATTTTTGCAGTTGATAAGCAGCATGAACATGGACATAAATATGCAATATCCTCAGCCATATGGTATCCCGTTGATACTGGACTGTTTGTCACTGGCTCATATGATCATCACATTAATGTCTGGGATACAAATACAACTCAGGTAGGTAACTTAAAGGTCATGTGGGTTTTACGCAGCAATTTTTGTTAAAAACTAATATCTCCATCTTGTAGGTGGTGGTGAATTTTAAATTGCCTGGAAAAGTTTATAGGACAGCCATGTCCTCTTTGGCAACATCACACATGCTGATTGCTGCTGGAACAGAAGATGTTCAAGTTCGCCTTTGTGATATTTCTTCTGGAGCATTTTCTCACACATTATCTGGACATCGTGGTATGGTTGTGATTTATGCATTAACTTCTAAGAGAGTTATCGCTCAAGTTGTACATGTACGTGTACCACAATTTTTTAGTTTCAAAATGTTACAACGATTGCAATCCTTTAAAATTTGTGGAAATGTCAATACCTTTATGACAGAACAGTTTAAGAGCTTTATAATAAATTTCCCCGTTCCCTAGTCCCCCCAAAGGAAAAATAATAATAATAAATAAAGGATCCGTGCTACCTGAATTAACATACCTAAATATATGACAAGATTTGCAACTAGCAACCACAATTCTTTCTTTCTAATTGTGACTAGCACGTGCCTGTGCCATATGCTGGGTTGACTTTGAAAAAGCATGCTGAGTTAGGCTTCAGATATAGAACTGAATACAAATTGTGACCCAGCTTTCCTCTGGTTTCCTGGATAACATAAGTAGAATGTAATGAAACAAAGATGATTTAGGCTTCAGAAATAGAACTGAATACAAATTGTGACCCAGCTTCACCCTACTTCTATGGAAGTGATAAAACTCGATATAGTACAGTGGTATTGAACAGTGATCTATGGCCTTTGCCTTCCAATATTTCTTTCCCATTATCTAGTAATATACTCGTTTTACAATTTGCGGCACCTGATTGTGTTATGAAATTTAATCAACCAGTTGACCTGTGTTTTCTGTTTTGCCTACTTATCTTTGTAAGCCTGTATTTACCGACATTAATGTTTATATTATCGTTTTATAGATGGTGTAATGAGTGTAGAATGGTCAGCTTCTAGCGAGTGGGTTTTGGTTACTGGAGGATGTGATGGAGCTATACGCTTTTGGGACATCAGACGAGCTGGATGCTTTCGTGTTCTAGATCAGTCTCAATCCCAGCTTGGGAGACGTCCCCCCATTTCAGGATGGACTGCAAATAAGGTCCTCCTTCTCTTAGTTTGGCTCTCACCGTATCCACCAGTTCATTTGTTTGTAGATTAACAGATTTCATGTTACTCTTTCTCAGCTCTCAACATCTAAGTCTCTCTTGGCCAGCCAAGGCTCAAATATGAAATCTCGCATACCTCATAAGAAACTAGCCAATGGAAATGCAACAAAGCCATCATCTACAGGTAAACTGCCAGCTAAGGGATCCACAAGGCAGAGGCTGCACCCAGGGCTTTTGTCCAGTCAGGATCGAGCAGTTTCTCACTATGGTGCTGTCACTGGATTAAAAGTAACTGGCGATGGCATGTACCTTCTCAGTGCAGGTTGAGTTACCCCTGTCAACTCTTTCCAATCCAATTAAATATAGTTTAATTGTATTATATTCATGTCTTTTTTTGGAATTAATGATCTATAAAAAGGCATGATTTCCTCAAGTATGCGGCTGCAGGACATCATGTCTAGATGGAGGAAAAAATTAGTGAATTGATTAAGCACGAGGGGAATTTAAAATGAGATTGCCACTAGTTTTTTATTAAAAAAGAAGATACCATTGTGATAAGAAAATGATCAGTATTTTGAAAATCCTTTTATATATGGTAGTCATGTACCCGACTTCTTGGTGATAATGGTGCTGTTAGGTATGTTGTAATATCAAATCAATAACAAGATCTGTGTTAATCTTTATTCTGTTCTGAAAAATTATGATGGTTGGAGAATTGAATTCTTTAATAGACCCTCTATCTGCTGTGATATAATTAAATCTATTGACGCCAATTAATCAGCAATGTCATTTTTTAATATTATTTTTATTTTATTTTTTCCACAATCGGTTGAGGTTGCCATGTTATACTGTGTGAGAGAGATTATGATCAGATGTAAAATCTGGATTTTTTTTTCAGGTTCTGATTCAAGGTTAAAGTTATGGGATGTTGAATCCGGGTGCAATACACTCGTGAATTATGAAACCATGCGGTTACAGACCAACAAACCATTGCAATTAGCCACATGTCAGGATTCAGCCCTTGTATTTGCCCCATGCATGACGACTGTTAAAGTACATCCTTCTACCTATATGTTTGAGTTTGTTTCTGTGCGTACAACTTACGTGTAGATCTAGCTGACTTCTTGAACTTTTAGGCATTTGATATGTGGACAGGGAAGACATCCCTGACATTCAGCGGCCACTATGAAGGTGTGAACTGTTGCTGGTATAATTTCCCAGATCAGGTACGGCCGTTTCCCCCTTCTCTTCTCTGCATTCATCAATCTTAAGCTCTCGCCATTCGGTTCGTTCAACTGAATCTTCAAAGTTTTGCAATGTACCTCAGGAACTGTACACTGGTGGCAACGATAGGCAAATTCTCGTCTGGTCACCATCCCGGAACTCTACCGAACTGGTACACCTTCTGAACTCATGCCCCATTCATGGAATTGAATTGACTCTCAATGCTGCATATTCTTCCAATAATACCATTGAAGTTGCCCTGGTAGCTTATTCCATTTCAGTGGACTTGCAGGATTGGGAATCGACTGCAGATAAAGATAACTGGAGCGACTGACTGTCATCGACAAGAAAGTTCGGTTTCAATGCTGATGCCATCCATCAGACTCTGCTCACCATGTACATAACTTTCCATACGTGTATCATCTTTCAATGATTCTGCCCTCTCTTTCAAATTGTCGATTAGGACGTGCACTATACTATAGCGTGGACTTGGAAAAAGTCCACACCTTGTTCATTTAGTAATAAACATGCTATGCTGCAAGCCTGCGGCATGTTGGGTTTGGCTGTGTTGCTTTTTTCATCGAGTTTGGTAACTTTGTTATAATGTCTTGGATTCGCCATCCATATGATTGAAAACTTTGGTTTGTTCTTGAATTTTACGTCATGATTTGGAAAAAGAGAACTATATGGATTATAATCTTGACCAGCTTTTTTGCGTACGATTTTCTTTAATAGAAATGTATTGAG

mRNA sequence

TAGGAGTTGGGCCAAACCGTCTCTGAAGTTTGGATCTGGTAGCCCTAATCACACGGAAGCCCAAAGCGATCGTCGTTCTTCTCTCCGAAGTCCCAATAATAATTGAGAGAGAGAGATAACGAAGAAGGAAGGATTAAGGAATAGAGCCAGCACCGGATCAAGAGGAAGGAACAGTGGGTGGGAGGAGAATAAACCTGAAGAAGCTTCAATTGGTGGCCTCCGAATTGGGGTTGCAGAGCGCCGTTCATATCCTTGGACTTCATAGCTTTCCAGCGCTGTGTCTGAAGGAATCAAGTGGGGAAGATACTGTTGCAGAAAATAGATAGAGACAGAGAGGAAGATACAGCGTTTTTGCATGAGGGCAAAGATGCTTGGAGAATGTGGAAGGATATTAGAGATAGAGAAGCGGGGAAACTCCGCCCAAATTCTTTCGCAAATCGTGTTAAATCCGATCGAACCAGCTCTCTGCAACTTTCCAATCACAAGGACATTGTCTCTCCCCATAGAGGTTCCGTCAACTCACTTCAGGTTGATTTGACAGAGGGGAGATATTTGTTATCTGGAGCATCAGATGCATCGGCTGCTGTTTTTGATATTCAACGTGCAACTCATTCCGAGGGCCTTATTGCAAAGCACCAATGCATTTTTGCAGTTGATAAGCAGCATGAACATGGACATAAATATGCAATATCCTCAGCCATATGGTATCCCGTTGATACTGGACTGTTTGTCACTGGCTCATATGATCATCACATTAATGTCTGGGATACAAATACAACTCAGGTGGTGGTGAATTTTAAATTGCCTGGAAAAGTTTATAGGACAGCCATGTCCTCTTTGGCAACATCACACATGCTGATTGCTGCTGGAACAGAAGATGTTCAAGTTCGCCTTTGTGATATTTCTTCTGGAGCATTTTCTCACACATTATCTGGACATCGTGATGGTGTAATGAGTGTAGAATGGTCAGCTTCTAGCGAGTGGGTTTTGGTTACTGGAGGATGTGATGGAGCTATACGCTTTTGGGACATCAGACGAGCTGGATGCTTTCGTGTTCTAGATCAGTCTCAATCCCAGCTTGGGAGACGTCCCCCCATTTCAGGATGGACTGCAAATAAGCTCTCAACATCTAAGTCTCTCTTGGCCAGCCAAGGCTCAAATATGAAATCTCGCATACCTCATAAGAAACTAGCCAATGGAAATGCAACAAAGCCATCATCTACAGGTAAACTGCCAGCTAAGGGATCCACAAGGCAGAGGCTGCACCCAGGGCTTTTGTCCAGTCAGGATCGAGCAGTTTCTCACTATGGTGCTGTCACTGGATTAAAAGTAACTGGCGATGGCATGTACCTTCTCAGTGCAGGTTCTGATTCAAGGTTAAAGTTATGGGATGTTGAATCCGGGTGCAATACACTCGTGAATTATGAAACCATGCGGTTACAGACCAACAAACCATTGCAATTAGCCACATGTCAGGATTCAGCCCTTGTATTTGCCCCATGCATGACGACTGTTAAAGCATTTGATATGTGGACAGGGAAGACATCCCTGACATTCAGCGGCCACTATGAAGGTGTGAACTGTTGCTGGTATAATTTCCCAGATCAGGAACTGTACACTGGTGGCAACGATAGGCAAATTCTCGTCTGGTCACCATCCCGGAACTCTACCGAACTGGTACACCTTCTGAACTCATGCCCCATTCATGGAATTGAATTGACTCTCAATGCTGCATATTCTTCCAATAATACCATTGAAGTTGCCCTGGTAGCTTATTCCATTTCAGTGGACTTGCAGGATTGGGAATCGACTGCAGATAAAGATAACTGGAGCGACTGACTGTCATCGACAAGAAAGTTCGGTTTCAATGCTGATGCCATCCATCAGACTCTGCTCACCATGTACATAACTTTCCATACGTGTATCATCTTTCAATGATTCTGCCCTCTCTTTCAAATTGTCGATTAGGACGTGCACTATACTATAGCGTGGACTTGGAAAAAGTCCACACCTTGTTCATTTAGTAATAAACATGCTATGCTGCAAGCCTGCGGCATGTTGGGTTTGGCTGTGTTGCTTTTTTCATCGAGTTTGGTAACTTTGTTATAATGTCTTGGATTCGCCATCCATATGATTGAAAACTTTGGTTTGTTCTTGAATTTTACGTCATGATTTGGAAAAAGAGAACTATATGGATTATAATCTTGACCAGCTTTTTTGCGTACGATTTTCTTTAATAGAAATGTATTGAG

Coding sequence (CDS)

ATGTGGAAGGATATTAGAGATAGAGAAGCGGGGAAACTCCGCCCAAATTCTTTCGCAAATCGTGTTAAATCCGATCGAACCAGCTCTCTGCAACTTTCCAATCACAAGGACATTGTCTCTCCCCATAGAGGTTCCGTCAACTCACTTCAGGTTGATTTGACAGAGGGGAGATATTTGTTATCTGGAGCATCAGATGCATCGGCTGCTGTTTTTGATATTCAACGTGCAACTCATTCCGAGGGCCTTATTGCAAAGCACCAATGCATTTTTGCAGTTGATAAGCAGCATGAACATGGACATAAATATGCAATATCCTCAGCCATATGGTATCCCGTTGATACTGGACTGTTTGTCACTGGCTCATATGATCATCACATTAATGTCTGGGATACAAATACAACTCAGGTGGTGGTGAATTTTAAATTGCCTGGAAAAGTTTATAGGACAGCCATGTCCTCTTTGGCAACATCACACATGCTGATTGCTGCTGGAACAGAAGATGTTCAAGTTCGCCTTTGTGATATTTCTTCTGGAGCATTTTCTCACACATTATCTGGACATCGTGATGGTGTAATGAGTGTAGAATGGTCAGCTTCTAGCGAGTGGGTTTTGGTTACTGGAGGATGTGATGGAGCTATACGCTTTTGGGACATCAGACGAGCTGGATGCTTTCGTGTTCTAGATCAGTCTCAATCCCAGCTTGGGAGACGTCCCCCCATTTCAGGATGGACTGCAAATAAGCTCTCAACATCTAAGTCTCTCTTGGCCAGCCAAGGCTCAAATATGAAATCTCGCATACCTCATAAGAAACTAGCCAATGGAAATGCAACAAAGCCATCATCTACAGGTAAACTGCCAGCTAAGGGATCCACAAGGCAGAGGCTGCACCCAGGGCTTTTGTCCAGTCAGGATCGAGCAGTTTCTCACTATGGTGCTGTCACTGGATTAAAAGTAACTGGCGATGGCATGTACCTTCTCAGTGCAGGTTCTGATTCAAGGTTAAAGTTATGGGATGTTGAATCCGGGTGCAATACACTCGTGAATTATGAAACCATGCGGTTACAGACCAACAAACCATTGCAATTAGCCACATGTCAGGATTCAGCCCTTGTATTTGCCCCATGCATGACGACTGTTAAAGCATTTGATATGTGGACAGGGAAGACATCCCTGACATTCAGCGGCCACTATGAAGGTGTGAACTGTTGCTGGTATAATTTCCCAGATCAGGAACTGTACACTGGTGGCAACGATAGGCAAATTCTCGTCTGGTCACCATCCCGGAACTCTACCGAACTGGTACACCTTCTGAACTCATGCCCCATTCATGGAATTGAATTGACTCTCAATGCTGCATATTCTTCCAATAATACCATTGAAGTTGCCCTGGTAGCTTATTCCATTTCAGTGGACTTGCAGGATTGGGAATCGACTGCAGATAAAGATAACTGGAGCGACTGA

Protein sequence

MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPISGWTANKLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSSTGKLPAKGSTRQRLHPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATCQDSALVFAPCMTTVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSPSRNSTELVHLLNSCPIHGIELTLNAAYSSNNTIEVALVAYSISVDLQDWESTADKDNWSD
Homology
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BLAST of Lsi08G015280 vs. Swiss-Prot
Match: ERCC8_MOUSE (DNA excision repair protein ERCC-8 OS=Mus musculus GN=Ercc8 PE=2 SV=2)

HSP 1 Score: 175.6 bits (444), Expect = 1.3e-42
Identity = 85/223 (38.12%), Postives = 124/223 (55.61%), Query Frame = 1 

Query: 8   REAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDAS 67
           R++G   P        + R   L+L+  +D+   H   VN+L ++  EGRY+LSG SD  
Sbjct: 8   RQSGLEDPLRLRRAQSTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEGRYMLSGGSDGV 67

Query: 68  AAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHHIN 127
             ++D++ A+       K  C  +V + H   HKY++ +  WYP DTG+F + S+D  + 
Sbjct: 68  VVLYDLENASRQPHYTCKAVC--SVGRSHPDVHKYSVETVQWYPHDTGMFTSSSFDKTLK 127

Query: 128 VWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGH 187
           VWDTNT Q    F     VY   MS  AT H L+A GT   +V+LCD+ SG+ SH L GH
Sbjct: 128 VWDTNTLQAADVFNFEETVYSHHMSPAATKHCLVAVGTRGPKVQLCDLKSGSCSHILQGH 187

Query: 188 RDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRA-GCFRVLDQ 230
           R  +++V WS   +++L T   D  ++ WD+RRA GC   LDQ
Sbjct: 188 RQEILAVSWSPRHDYILATASADSRVKLWDVRRASGCLLTLDQ 228

[Close]
BLAST of Lsi08G015280 vs. Swiss-Prot
Match: ERCC8_BOVIN (DNA excision repair protein ERCC-8 OS=Bos taurus GN=ERCC8 PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.7e-42
Identity = 86/223 (38.57%), Postives = 125/223 (56.05%), Query Frame = 1 

Query: 8   REAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDAS 67
           R+AG   P        + R   L+L+  +D+   H   VN+L ++  EGRY+LSG SD  
Sbjct: 8   RQAGLEDPLRLRRAESTRRVLGLELNKDRDVERIHCSGVNTLDIEPVEGRYMLSGGSDGV 67

Query: 68  AAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHHIN 127
             ++D++ ++       K  C  +V + H   HKY++ +  WYP DTG+F + S+D  + 
Sbjct: 68  IVLYDLENSSRQPYYTCKAVC--SVGRSHPDVHKYSVETVQWYPHDTGMFTSSSFDKTLK 127

Query: 128 VWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGH 187
           VWDTNT Q+   F     VY   MS +AT H L+A GT   +V+LCD+ SG+ SH L GH
Sbjct: 128 VWDTNTLQIADVFNFEETVYSHHMSPVATKHCLVAVGTRGPKVQLCDLKSGSCSHILQGH 187

Query: 188 RDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRA-GCFRVLDQ 230
           R  +++V WS   E++L T   D   + WD+RRA GC   LDQ
Sbjct: 188 RQEILAVSWSPRYEYILATASADSRAKLWDVRRASGCLITLDQ 228

[Close]
BLAST of Lsi08G015280 vs. Swiss-Prot
Match: ERCC8_HUMAN (DNA excision repair protein ERCC-8 OS=Homo sapiens GN=ERCC8 PE=1 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 8.3e-42
Identity = 81/223 (36.32%), Postives = 125/223 (56.05%), Query Frame = 1 

Query: 8   REAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLLSGASDAS 67
           R+ G   P        + R   L+L+  +D+   H G +N+L ++  EGRY+LSG SD  
Sbjct: 8   RQTGLEDPLRLRRAESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGV 67

Query: 68  AAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHHIN 127
             ++D++ ++       K  C  ++ + H   H+Y++ +  WYP DTG+F + S+D  + 
Sbjct: 68  IVLYDLENSSRQSYYTCKAVC--SIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLK 127

Query: 128 VWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHTLSGH 187
           VWDTNT Q    F     VY   MS ++T H L+A GT   +V+LCD+ SG+ SH L GH
Sbjct: 128 VWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGH 187

Query: 188 RDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRA-GCFRVLDQ 230
           R  +++V WS   +++L T   D  ++ WD+RRA GC   LDQ
Sbjct: 188 RQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQ 228

[Close]
BLAST of Lsi08G015280 vs. Swiss-Prot
Match: CKN1_SCHPO (DNA excision repair protein ckn1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ckn1 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 4.6e-32
Identity = 88/273 (32.23%), Postives = 141/273 (51.65%), Query Frame = 1 

Query: 8   REAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHR----GSVNSLQVDLTEGRYLLSGA 67
           RE G+   +SF  ++   R   L L+    I   H     GSVN+L +D T  + ++SG 
Sbjct: 8   REWGQEPNSSFRRQLLQHRLQRLALNPDVKIKRRHGAGILGSVNALSIDNTIHQLMVSGG 67

Query: 68  SDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYD 127
           +++S  V+D+Q     E        + AV  +  H  K+ I+   W+P D G+F + S+D
Sbjct: 68  ANSSINVWDLQNIDQKEDEDLILDTLNAVPARTSH--KFGITDLHWFPFDNGIFTSSSFD 127

Query: 128 HHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAFSHT 187
           H + VWD +T Q    F +   +Y  A S +A SH LIA       +RLCD+ SG+++H+
Sbjct: 128 HTLKVWDVSTLQEAYTFTMEDMIYSHAWSPIA-SHCLIATAYRSSSIRLCDMQSGSYTHS 187

Query: 188 LSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRA----GCF----RVLDQSQSQLG 247
           LSGH   V++V+W   +E+VL +G  DG  R WDIR+      C     + L  +Q+ + 
Sbjct: 188 LSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIRKVSSSFACMDLHNKYLPSNQTNIS 247

Query: 248 RRPPISG--WTANKLSTSKSLLASQGSNMKSRI 267
               ++G  WT++        LAS G++ + R+
Sbjct: 248 HYGTVNGLAWTSD-----ARYLASCGTDDRIRV 272

[Close]
BLAST of Lsi08G015280 vs. Swiss-Prot
Match: YY46_NOSS1 (Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=alr3466 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.0e-19
Identity = 104/392 (26.53%), Postives = 161/392 (41.07%), Query Frame = 1 

Query: 59   LLSGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFV 118
            L SG+SD +  ++DI             +C++    Q   G  Y+++    + +D  +  
Sbjct: 963  LASGSSDQTVRLWDISSG----------ECLYIF--QGHTGWVYSVA----FNLDGSMLA 1022

Query: 119  TGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSG 178
            TGS D  + +WD +++Q    F+      R+ + S  +   ++A+G++D  VRL DISSG
Sbjct: 1023 TGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVVFS--SDGAMLASGSDDQTVRLWDISSG 1082

Query: 179  AFSHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRR- 238
               +TL GH   V SV +S     +L +GG D  +R WDI    C   L    S +    
Sbjct: 1083 NCLYTLQGHTSCVRSVVFSPDGA-MLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLV 1142

Query: 239  -PPISGWTAN----------KLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSSTGKLP 298
              P     AN           +S+ K L   QG        H    N  A  P   G   
Sbjct: 1143 FSPNGVTLANGSSDQIVRLWDISSKKCLYTLQG--------HTNWVNAVAFSPD--GATL 1202

Query: 299  AKGSTRQRLHPGLLSSQDRAV---SHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGC 358
            A GS  Q +    +SS         H   V  +    DG  L S  SD  ++LW++ S  
Sbjct: 1203 ASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSS- 1262

Query: 359  NTLVNYETMRLQTNKPLQLATCQDSALVFAPCMTTVKAFDMWTGKTSLTFSGHYEGVNCC 418
              L  ++      N    +     S L       TV+ +D+ + K   TF GH   VN  
Sbjct: 1263 KCLCTFQGHTSWVNS--VVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSV 1320

Query: 419  WYNFPDQELYTGGNDRQILVWSPSRNSTELVH 436
             +N     L +G  D+ + +W  S  S++ +H
Sbjct: 1323 AFNPDGSMLASGSGDQTVRLWEIS--SSKCLH 1320

[Close]
BLAST of Lsi08G015280 vs. TrEMBL
Match: A0A0A0LL05_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G354740 PE=4 SV=1)

HSP 1 Score: 865.5 bits (2235), Expect = 3.0e-248
Identity = 422/433 (97.46%), Postives = 429/433 (99.08%), Query Frame = 1 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWK+IRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKNIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG 120
           SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG
Sbjct: 61  SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
           S+DHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF
Sbjct: 121 SFDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180

Query: 181 SHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI 240
           SHTLSGHRDGVMSVEWSASSEWVL+TGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI
Sbjct: 181 SHTLSGHRDGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI 240

Query: 241 SGWTANKLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSSTGKLPAKGSTRQRLHPGLL 300
           SGWTANKLSTSKSLLASQGSNMKSRIPHKKL NGNATKPSSTGKLPAKGSTRQRLHPGLL
Sbjct: 241 SGWTANKLSTSKSLLASQGSNMKSRIPHKKLTNGNATKPSSTGKLPAKGSTRQRLHPGLL 300

Query: 301 SSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPL 360
           S QDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVN+ET+RLQTNKPL
Sbjct: 301 SGQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNFETIRLQTNKPL 360

Query: 361 QLATCQDSALVFAPCMTTVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQ 420
           QLAT QDS+LVFAPCM TVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQ
Sbjct: 361 QLATSQDSSLVFAPCMATVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQ 420

Query: 421 ILVWSPSRNSTEL 434
           ILVWSPS+NSTEL
Sbjct: 421 ILVWSPSQNSTEL 433

[Close]
BLAST of Lsi08G015280 vs. TrEMBL
Match: E0CP23_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g09100 PE=4 SV=1)

HSP 1 Score: 711.1 bits (1834), Expect = 9.5e-202
Identity = 352/449 (78.40%), Postives = 391/449 (87.08%), Query Frame = 1 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWKD+ DREAGKLRP SF+NR+ SDR +SLQLSN+K+IVSPHRG+VNSLQVDLTEGRYLL
Sbjct: 1   MWKDLGDREAGKLRPYSFSNRITSDRIASLQLSNYKEIVSPHRGAVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRATHSEG--LIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFV 120
           SGASDASAAV+DIQRAT  EG  L+AKH+ IF VDKQHEHGHKYAISSAIWYP+DTGLF+
Sbjct: 61  SGASDASAAVYDIQRATEYEGGSLVAKHKSIFVVDKQHEHGHKYAISSAIWYPIDTGLFI 120

Query: 121 TGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSG 180
           TGSYDH+INVWDTNTTQVVVNFK+PGK+YRTAMSSLAT+HMLIAAGTEDVQVRLCDI+SG
Sbjct: 121 TGSYDHYINVWDTNTTQVVVNFKMPGKIYRTAMSSLATAHMLIAAGTEDVQVRLCDIASG 180

Query: 181 AFSHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRP 240
           AF+HTLSGHRDGVM+VEWS SSEWVLVTGGCDGAIRFWDIRRAGCF VLDQSQSQLGRRP
Sbjct: 181 AFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRP 240

Query: 241 P-ISGWTANKLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSSTGKL--PAKGSTRQRL 300
           P +   TANK   SKS  ASQ  N++SR P +K A GN +K S+TG+    AKG  RQRL
Sbjct: 241 PLLECSTANKAPMSKSFPASQSVNVRSRAPQRKFAYGNGSKQSATGRTSSQAKGLVRQRL 300

Query: 301 HPGLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQ 360
           HPG+LSSQDRA SHYGAVTGLKVT DGMYLLSAGSDSRL+LWD+ SGCNTLVN+ET+RLQ
Sbjct: 301 HPGMLSSQDRATSHYGAVTGLKVTDDGMYLLSAGSDSRLRLWDIMSGCNTLVNFETVRLQ 360

Query: 361 TNKPLQLATCQDSALVFAPCMTTVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTG 420
           T+K +QLA   DSALVF PCMT VKAFD+W+GKT++TF GHYE VNCCW +  DQELYTG
Sbjct: 361 TSKAMQLAITNDSALVFVPCMTAVKAFDVWSGKTAMTFRGHYEYVNCCWLSLQDQELYTG 420

Query: 421 GNDRQILVWSPSR-NSTELVHLLNSCPIH 444
           GNDRQILVWSPSR N  E+ H     PIH
Sbjct: 421 GNDRQILVWSPSRLNFDEMDHGSREEPIH 449

[Close]
BLAST of Lsi08G015280 vs. TrEMBL
Match: M5XD14_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005733mg PE=4 SV=1)

HSP 1 Score: 708.0 bits (1826), Expect = 8.0e-201
Identity = 350/437 (80.09%), Postives = 386/437 (88.33%), Query Frame = 1 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MW++I DREAGKLRPNSF+NR+KS+R  +LQLSN KDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWREIGDREAGKLRPNSFSNRIKSNRIQTLQLSNRKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRATHSEG--LIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFV 120
           SGASDASAAVFDIQ  T  EG  +I KH+C+F VDKQHE GHKYA+SSAIWYPVDTGLFV
Sbjct: 61  SGASDASAAVFDIQHGTDYEGGGVIRKHKCLFMVDKQHEQGHKYAVSSAIWYPVDTGLFV 120

Query: 121 TGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSG 180
           TGSYDHHINVWDTNTTQVV++FK+PGKVYRTAMS LATSHMLIAAGTEDVQVRLCDI+SG
Sbjct: 121 TGSYDHHINVWDTNTTQVVMDFKMPGKVYRTAMSPLATSHMLIAAGTEDVQVRLCDIASG 180

Query: 181 AFSHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRP 240
           AF+HTLSGHRDGVM+VEWS SSEWVLVTGGCDGAIRFWDIRRAGCF VLDQSQSQLGRRP
Sbjct: 181 AFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRP 240

Query: 241 PISGWTAN-KLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSSTGKLPAKGSTRQRLHP 300
           PI   +A  K ST+KSL ASQ S  K+R P  KL N    K S  GK+P KGS +QRLHP
Sbjct: 241 PILKRSATIKGSTAKSLSASQSSFAKARTPQTKLMN---AKQSPVGKIPVKGSLKQRLHP 300

Query: 301 GLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTN 360
           G+LSSQDRA +HYGAVTGLKVT DGMYLLSAGSDSRL+LWDVESGCNTLVN+ET+RLQT+
Sbjct: 301 GMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRLRLWDVESGCNTLVNFETVRLQTS 360

Query: 361 KPLQLATCQDSALVFAPCMTTVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGN 420
           KP+QLAT Q+ ALVF PCMT VKAF+MW+GKTSLTF GHYE VNCCW++  DQELYTGGN
Sbjct: 361 KPIQLATSQNLALVFVPCMTAVKAFNMWSGKTSLTFRGHYEHVNCCWFSLQDQELYTGGN 420

Query: 421 DRQILVWSPSRNSTELV 435
           DRQILVWSPSR+ ++ V
Sbjct: 421 DRQILVWSPSRSVSDEV 434

[Close]
BLAST of Lsi08G015280 vs. TrEMBL
Match: A0A0D2S5Z1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G219900 PE=4 SV=1)

HSP 1 Score: 703.0 bits (1813), Expect = 2.6e-199
Identity = 344/441 (78.00%), Postives = 389/441 (88.21%), Query Frame = 1 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWKDI DRE GK+RPNSF++R+KS+R S+LQLSN+KDIVS HRGS+NSLQVDLTEGRYLL
Sbjct: 1   MWKDIGDREMGKIRPNSFSSRIKSNRISNLQLSNNKDIVSSHRGSINSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRATHSEG--LIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFV 120
           SGASDASAAVFDIQRAT+ EG  LIAKH+C+F+VDKQH+ GHKYAISSAIWYPVDTGLFV
Sbjct: 61  SGASDASAAVFDIQRATNYEGDGLIAKHKCLFSVDKQHQKGHKYAISSAIWYPVDTGLFV 120

Query: 121 TGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSG 180
           TGSYDHHI VWDTNTTQVV+NFK+PGKVYRTAMS+LATSHMLIAAGTEDVQVRLCDISSG
Sbjct: 121 TGSYDHHIKVWDTNTTQVVMNFKMPGKVYRTAMSTLATSHMLIAAGTEDVQVRLCDISSG 180

Query: 181 AFSHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRP 240
           AF+HTLSGHRDGVM+VEWS SSEWVL+TGGCDGAIRFWDIRRAGCF VLDQSQSQLG+RP
Sbjct: 181 AFAHTLSGHRDGVMTVEWSTSSEWVLITGGCDGAIRFWDIRRAGCFLVLDQSQSQLGQRP 240

Query: 241 PISGWTA-NKLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSSTGKLPAKGSTRQRLHP 300
           P+   +A NK+S SKSL A Q   +KSR+P KK ANG+  K S+ G+LP+KG  RQRLHP
Sbjct: 241 PVLARSAANKVSVSKSLSAGQNLLVKSRVPQKKYANGHGMKQSTIGRLPSKGYARQRLHP 300

Query: 301 GLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTN 360
           G+LS QDRA +HYGAVTGLKVT DGMYLLSAGSDSR+KLWD+ESG NTLVN+  +RLQ +
Sbjct: 301 GMLSIQDRATAHYGAVTGLKVTDDGMYLLSAGSDSRIKLWDLESGYNTLVNFGKVRLQAS 360

Query: 361 KPLQLATCQDSALVFAPCMTTVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGN 420
           K +QLA  QDSA VF PCM  VKAFD+W+GK SLTF GHYE VNCCW++  DQELYTGGN
Sbjct: 361 KAIQLAVSQDSAQVFVPCMAVVKAFDVWSGKMSLTFRGHYESVNCCWFSSQDQELYTGGN 420

Query: 421 DRQILVWSPSRNSTE--LVHL 437
           DRQILVWSPS+  T+  ++HL
Sbjct: 421 DRQILVWSPSKPITDDTVIHL 441

[Close]
BLAST of Lsi08G015280 vs. TrEMBL
Match: A0A0D2QKW2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G219900 PE=4 SV=1)

HSP 1 Score: 701.8 bits (1810), Expect = 5.7e-199
Identity = 342/435 (78.62%), Postives = 385/435 (88.51%), Query Frame = 1 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWKDI DRE GK+RPNSF++R+KS+R S+LQLSN+KDIVS HRGS+NSLQVDLTEGRYLL
Sbjct: 1   MWKDIGDREMGKIRPNSFSSRIKSNRISNLQLSNNKDIVSSHRGSINSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRATHSEG--LIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFV 120
           SGASDASAAVFDIQRAT+ EG  LIAKH+C+F+VDKQH+ GHKYAISSAIWYPVDTGLFV
Sbjct: 61  SGASDASAAVFDIQRATNYEGDGLIAKHKCLFSVDKQHQKGHKYAISSAIWYPVDTGLFV 120

Query: 121 TGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSG 180
           TGSYDHHI VWDTNTTQVV+NFK+PGKVYRTAMS+LATSHMLIAAGTEDVQVRLCDISSG
Sbjct: 121 TGSYDHHIKVWDTNTTQVVMNFKMPGKVYRTAMSTLATSHMLIAAGTEDVQVRLCDISSG 180

Query: 181 AFSHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRP 240
           AF+HTLSGHRDGVM+VEWS SSEWVL+TGGCDGAIRFWDIRRAGCF VLDQSQSQLG+RP
Sbjct: 181 AFAHTLSGHRDGVMTVEWSTSSEWVLITGGCDGAIRFWDIRRAGCFLVLDQSQSQLGQRP 240

Query: 241 PISGWTA-NKLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSSTGKLPAKGSTRQRLHP 300
           P+   +A NK+S SKSL A Q   +KSR+P KK ANG+  K S+ G+LP+KG  RQRLHP
Sbjct: 241 PVLARSAANKVSVSKSLSAGQNLLVKSRVPQKKYANGHGMKQSTIGRLPSKGYARQRLHP 300

Query: 301 GLLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTN 360
           G+LS QDRA +HYGAVTGLKVT DGMYLLSAGSDSR+KLWD+ESG NTLVN+  +RLQ +
Sbjct: 301 GMLSIQDRATAHYGAVTGLKVTDDGMYLLSAGSDSRIKLWDLESGYNTLVNFGKVRLQAS 360

Query: 361 KPLQLATCQDSALVFAPCMTTVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGN 420
           K +QLA  QDSA VF PCM  VKAFD+W+GK SLTF GHYE VNCCW++  DQELYTGGN
Sbjct: 361 KAIQLAVSQDSAQVFVPCMAVVKAFDVWSGKMSLTFRGHYESVNCCWFSSQDQELYTGGN 420

Query: 421 DRQILVWSPSRNSTE 433
           DRQILVWSPS+  T+
Sbjct: 421 DRQILVWSPSKPITD 435

[Close]
BLAST of Lsi08G015280 vs. TAIR10
Match: AT1G27840.3 (AT1G27840.3 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 617.8 bits (1592), Expect = 5.5e-177
Identity = 307/429 (71.56%), Postives = 348/429 (81.12%), Query Frame = 1 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MW+ I+DRE G++R NSFANR KS R  SLQLSN KD VSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWEAIKDRETGRIRSNSFANRFKSRRILSLQLSNRKDFVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRATHSE--GLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFV 120
           SGA+D SAAVFD+QRAT  E  GLIAKH+CIF VDKQHE+GHKYAISSAIWYP+DTGLF+
Sbjct: 61  SGAADGSAAVFDVQRATDYEASGLIAKHKCIFTVDKQHENGHKYAISSAIWYPIDTGLFI 120

Query: 121 TGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSG 180
           TGS+DH++ VWDTNT Q VV+FK+PGKVYRTAMSS+A SH LIAAGTEDVQVRLCDI+SG
Sbjct: 121 TGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIASG 180

Query: 181 AFSHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRP 240
           AFSHTLSGHRDGVMSVEWS SSEWVL TGGCDGAIRFWDIRRAGCFRVLDQSQ+QLG RP
Sbjct: 181 AFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLDQSQTQLGFRP 240

Query: 241 PISGWTANKLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSSTGKLPAKGSTRQRLHPG 300
           PI   TA     S    +S G   + +    K     + K SS+ K   + S ++R+HPG
Sbjct: 241 PILKRTAVGSKLSSVAKSSLGGQNRLKTLQSKQTGSQSVKGSSSAKASVEKSRQKRIHPG 300

Query: 301 LLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNK 360
           +LS+ DRA +HYGAVTGLK T DGMYLLSAGSDSR++LWD+ESG NTLVN+ET R+QTNK
Sbjct: 301 MLSTLDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNK 360

Query: 361 PLQLATCQDSALVFAPCMTTVK-AFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGN 420
            +QL T  D ALVF PCM TVK AF MW+G+T+L   GHYE VN C +N  DQELYT G+
Sbjct: 361 GIQLDTSDDPALVFVPCMKTVKVAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGS 420

Query: 421 DRQILVWSP 427
           DRQILVWSP
Sbjct: 421 DRQILVWSP 429

[Close]
BLAST of Lsi08G015280 vs. TAIR10
Match: AT1G19750.1 (AT1G19750.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 597.4 bits (1539), Expect = 7.7e-171
Identity = 295/428 (68.93%), Postives = 340/428 (79.44%), Query Frame = 1 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWK  +DRE G+ R NSFANR KS R  SLQLSN KD VSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKAFKDRETGRFRSNSFANRFKSRRILSLQLSNRKDFVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRATHSE--GLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFV 120
           SGA+D SAAVFD++RAT  E  GLIAKH+CIF V KQHE+GHKYAISSAIWYP+DTG+F+
Sbjct: 61  SGAADGSAAVFDVKRATDYEASGLIAKHKCIFTVRKQHENGHKYAISSAIWYPIDTGMFI 120

Query: 121 TGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSG 180
           TGS+DH++ VWDTNT+QVVV+FK+PGKVYRTAMSS+A SH LIAAGT+DVQVRLCDI+SG
Sbjct: 121 TGSFDHYVKVWDTNTSQVVVDFKMPGKVYRTAMSSMAMSHTLIAAGTDDVQVRLCDIASG 180

Query: 181 AFSHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRP 240
           AFSHTLSGHRDGVMSVEWS SSEWVL TGGCDGAIRFWDIRRAGCFRVLD SQ+QLG RP
Sbjct: 181 AFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLDNSQTQLGVRP 240

Query: 241 PISGWTANKLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSSTGKLPAKGSTRQRLHPG 300
           PI    A       +  +S G     +    K     + K SS+ K   + S ++R+HPG
Sbjct: 241 PILKRPAVSSKFFSAAKSSLGDQNWLKTLQSKHTGSQSVKGSSSEKPSVEKSRQKRIHPG 300

Query: 301 LLSSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNK 360
           +LS+ DRA +HYG VTGLK T DGMYLLSAGS SR++LWD+ESG NTLVN+ET R+QT++
Sbjct: 301 MLSTLDRATAHYGVVTGLKATNDGMYLLSAGSYSRIRLWDIESGRNTLVNFETGRIQTDR 360

Query: 361 PLQLATCQDSALVFAPCMTTVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGND 420
            +QL T  D ALVF PCM TVK F MW+G+T+L   GHYE VN C +N  DQELYT G D
Sbjct: 361 AIQLDTSDDPALVFVPCMKTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGAD 420

Query: 421 RQILVWSP 427
           RQI+VWSP
Sbjct: 421 RQIIVWSP 428

[Close]
BLAST of Lsi08G015280 vs. TAIR10
Match: AT5G50230.1 (AT5G50230.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 61.2 bits (147), Expect = 2.0e-09
Identity = 59/256 (23.05%), Postives = 107/256 (41.80%), Query Frame = 1 

Query: 98  HGHKYAISSAIWYPVDTGLFVTGSYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATS 157
           H H+    S + +  ++G   TG  D  + +WDTN+  ++ +  L G +      ++   
Sbjct: 222 HAHEGGCGSIV-FEYNSGTLFTGGQDRAVKMWDTNSGTLIKS--LYGSLGNILDMAVTHD 281

Query: 158 HMLIAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWD 217
           +  + A T    + + D+SSG   HTL+GH D V +V+ S  S   +V+   D  I+ WD
Sbjct: 282 NKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWD 341

Query: 218 IRRAGCFRVLDQSQSQLGRRPPISGWTANKLSTSKSL---------LASQGSNMKSRIPH 277
           + +  C   +  + +       I G T        +L         L S+ +   S +  
Sbjct: 342 LHKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTS 401

Query: 278 KKLA-NGNATKPSSTGKLPAKGSTRQRLHPGLL-SSQDRAVSHYGAVTGLKVTGDGMYLL 337
             L+ NGN    S    +     TR     G L +S +R  S++       ++ D  Y+ 
Sbjct: 402 VSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSC---ISPDDDYVA 461

Query: 338 SAGSDSRLKLWDVESG 343
           +  +D  + +W +  G
Sbjct: 462 AGSADGSVHVWSLSKG 471

[Close]
BLAST of Lsi08G015280 vs. TAIR10
Match: AT5G64730.1 (AT5G64730.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 57.0 bits (136), Expect = 3.8e-08
Identity = 37/133 (27.82%), Postives = 60/133 (45.11%), Query Frame = 1 

Query: 309 HYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPLQLATCQDS 368
           H GAV   +  GDG Y L+ G D  ++LW+   G    +  +T +    +   +    D+
Sbjct: 17  HEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRG----ILIKTYKSHGREVRDVHVTSDN 76

Query: 369 ALVFAPC--MTTVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQILVWSP 428
           A  F  C     V  +D+ TG+    F GH   VN   +N     + + G DR + VW  
Sbjct: 77  A-KFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDC 136

Query: 429 SRNSTELVHLLNS 440
             +S E V ++++
Sbjct: 137 RSHSVEPVQIIDT 144

[Close]
BLAST of Lsi08G015280 vs. TAIR10
Match: AT5G16750.1 (AT5G16750.1 Transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 52.8 bits (125), Expect = 7.1e-07
Identity = 53/218 (24.31%), Postives = 89/218 (40.83%), Query Frame = 1 

Query: 161 IAAGTEDVQVRLCDISSGAFSHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRR 220
           IA    DV + + D +  +   T+ G  D + ++  S   + +L + G    IR WD+  
Sbjct: 34  IACACGDV-INIVDSTDSSVKSTIEGESDTLTALALSPDDK-LLFSAGHSRQIRVWDLET 93

Query: 221 AGCFRVLDQSQSQLGRRPPISGWTANKLSTSKSLLASQGSNMKSRI-------------P 280
             C R      S  G   P+ G   +    S  LLA+ G++ K  +              
Sbjct: 94  LKCIR------SWKGHEGPVMGMACH---ASGGLLATAGADRKVLVWDVDGGFCTHYFRG 153

Query: 281 HKKLANGNATKPSSTGKLPAKGSTRQRLHPGLLSSQDRAVS-------HYGAVTGLKVTG 340
           HK + +     P S   +   GS    +    L++++           H+ AVT + ++ 
Sbjct: 154 HKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSE 213

Query: 341 DGMYLLSAGSDSRLKLWDV-ESGCN-TLVNYETMRLQT 357
           DG+ L SAG D  + LWD+ +  C  T+  YE +   T
Sbjct: 214 DGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVT 240

[Close]
BLAST of Lsi08G015280 vs. NCBI nr
Match: gi|449450283|ref|XP_004142893.1| (PREDICTED: DNA excision repair protein ERCC-8 isoform X2 [Cucumis sativus])

HSP 1 Score: 865.5 bits (2235), Expect = 4.3e-248
Identity = 422/433 (97.46%), Postives = 429/433 (99.08%), Query Frame = 1 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWK+IRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKNIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG 120
           SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG
Sbjct: 61  SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
           S+DHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF
Sbjct: 121 SFDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180

Query: 181 SHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI 240
           SHTLSGHRDGVMSVEWSASSEWVL+TGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI
Sbjct: 181 SHTLSGHRDGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI 240

Query: 241 SGWTANKLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSSTGKLPAKGSTRQRLHPGLL 300
           SGWTANKLSTSKSLLASQGSNMKSRIPHKKL NGNATKPSSTGKLPAKGSTRQRLHPGLL
Sbjct: 241 SGWTANKLSTSKSLLASQGSNMKSRIPHKKLTNGNATKPSSTGKLPAKGSTRQRLHPGLL 300

Query: 301 SSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPL 360
           S QDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVN+ET+RLQTNKPL
Sbjct: 301 SGQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNFETIRLQTNKPL 360

Query: 361 QLATCQDSALVFAPCMTTVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQ 420
           QLAT QDS+LVFAPCM TVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQ
Sbjct: 361 QLATSQDSSLVFAPCMATVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQ 420

Query: 421 ILVWSPSRNSTEL 434
           ILVWSPS+NSTEL
Sbjct: 421 ILVWSPSQNSTEL 433

[Close]
BLAST of Lsi08G015280 vs. NCBI nr
Match: gi|778670991|ref|XP_011649570.1| (PREDICTED: DNA excision repair protein ERCC-8 isoform X1 [Cucumis sativus])

HSP 1 Score: 865.5 bits (2235), Expect = 4.3e-248
Identity = 422/433 (97.46%), Postives = 429/433 (99.08%), Query Frame = 1 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWK+IRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKNIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG 120
           SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG
Sbjct: 61  SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
           S+DHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF
Sbjct: 121 SFDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180

Query: 181 SHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI 240
           SHTLSGHRDGVMSVEWSASSEWVL+TGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI
Sbjct: 181 SHTLSGHRDGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI 240

Query: 241 SGWTANKLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSSTGKLPAKGSTRQRLHPGLL 300
           SGWTANKLSTSKSLLASQGSNMKSRIPHKKL NGNATKPSSTGKLPAKGSTRQRLHPGLL
Sbjct: 241 SGWTANKLSTSKSLLASQGSNMKSRIPHKKLTNGNATKPSSTGKLPAKGSTRQRLHPGLL 300

Query: 301 SSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPL 360
           S QDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVN+ET+RLQTNKPL
Sbjct: 301 SGQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNFETIRLQTNKPL 360

Query: 361 QLATCQDSALVFAPCMTTVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQ 420
           QLAT QDS+LVFAPCM TVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQ
Sbjct: 361 QLATSQDSSLVFAPCMATVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQ 420

Query: 421 ILVWSPSRNSTEL 434
           ILVWSPS+NSTEL
Sbjct: 421 ILVWSPSQNSTEL 433

[Close]
BLAST of Lsi08G015280 vs. NCBI nr
Match: gi|659087635|ref|XP_008444554.1| (PREDICTED: DNA excision repair protein ERCC-8-like isoform X2 [Cucumis melo])

HSP 1 Score: 865.1 bits (2234), Expect = 5.6e-248
Identity = 422/433 (97.46%), Postives = 427/433 (98.61%), Query Frame = 1 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG 120
           SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG
Sbjct: 61  SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
           S+DHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF
Sbjct: 121 SFDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180

Query: 181 SHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI 240
           SHTLSGHRDGVMSVEWSASSEWVL+TGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI
Sbjct: 181 SHTLSGHRDGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI 240

Query: 241 SGWTANKLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSSTGKLPAKGSTRQRLHPGLL 300
           SGWTANKLSTSKSLLASQG NMKSRIPHKKL NGNATKPSSTGKLPAKGSTRQRLHPGLL
Sbjct: 241 SGWTANKLSTSKSLLASQGPNMKSRIPHKKLGNGNATKPSSTGKLPAKGSTRQRLHPGLL 300

Query: 301 SSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPL 360
           S QDR+VSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVN+ETMRLQTNKPL
Sbjct: 301 SGQDRSVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNFETMRLQTNKPL 360

Query: 361 QLATCQDSALVFAPCMTTVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQ 420
           QLAT QDS+LVFAPCM TVKAFDMWTGKTSLT SGHYEGVNCCWYNFPDQELYTGGNDRQ
Sbjct: 361 QLATSQDSSLVFAPCMATVKAFDMWTGKTSLTLSGHYEGVNCCWYNFPDQELYTGGNDRQ 420

Query: 421 ILVWSPSRNSTEL 434
           ILVWSPSRNSTEL
Sbjct: 421 ILVWSPSRNSTEL 433

[Close]
BLAST of Lsi08G015280 vs. NCBI nr
Match: gi|659087641|ref|XP_008444557.1| (PREDICTED: DNA excision repair protein ERCC-8-like isoform X5 [Cucumis melo])

HSP 1 Score: 865.1 bits (2234), Expect = 5.6e-248
Identity = 422/433 (97.46%), Postives = 427/433 (98.61%), Query Frame = 1 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG 120
           SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG
Sbjct: 61  SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
           S+DHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF
Sbjct: 121 SFDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180

Query: 181 SHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI 240
           SHTLSGHRDGVMSVEWSASSEWVL+TGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI
Sbjct: 181 SHTLSGHRDGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI 240

Query: 241 SGWTANKLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSSTGKLPAKGSTRQRLHPGLL 300
           SGWTANKLSTSKSLLASQG NMKSRIPHKKL NGNATKPSSTGKLPAKGSTRQRLHPGLL
Sbjct: 241 SGWTANKLSTSKSLLASQGPNMKSRIPHKKLGNGNATKPSSTGKLPAKGSTRQRLHPGLL 300

Query: 301 SSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPL 360
           S QDR+VSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVN+ETMRLQTNKPL
Sbjct: 301 SGQDRSVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNFETMRLQTNKPL 360

Query: 361 QLATCQDSALVFAPCMTTVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGNDRQ 420
           QLAT QDS+LVFAPCM TVKAFDMWTGKTSLT SGHYEGVNCCWYNFPDQELYTGGNDRQ
Sbjct: 361 QLATSQDSSLVFAPCMATVKAFDMWTGKTSLTLSGHYEGVNCCWYNFPDQELYTGGNDRQ 420

Query: 421 ILVWSPSRNSTEL 434
           ILVWSPSRNSTEL
Sbjct: 421 ILVWSPSRNSTEL 433

[Close]
BLAST of Lsi08G015280 vs. NCBI nr
Match: gi|659087637|ref|XP_008444555.1| (PREDICTED: DNA excision repair protein ERCC-8-like isoform X3 [Cucumis melo])

HSP 1 Score: 858.6 bits (2217), Expect = 5.3e-246
Identity = 422/439 (96.13%), Postives = 427/439 (97.27%), Query Frame = 1 

Query: 1   MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60
           MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL
Sbjct: 1   MWKDIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 61  SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG 120
           SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG
Sbjct: 61  SGASDASAAVFDIQRATHSEGLIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFVTG 120

Query: 121 SYDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180
           S+DHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF
Sbjct: 121 SFDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSGAF 180

Query: 181 SHTLSGHRDGVMSVEWSASSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI 240
           SHTLSGHRDGVMSVEWSASSEWVL+TGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI
Sbjct: 181 SHTLSGHRDGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPI 240

Query: 241 SGWTANKLSTSKSLLASQGSNMKSRIPHKKLANGNATKPSSTGKLPAKGSTRQRLHPGLL 300
           SGWTANKLSTSKSLLASQG NMKSRIPHKKL NGNATKPSSTGKLPAKGSTRQRLHPGLL
Sbjct: 241 SGWTANKLSTSKSLLASQGPNMKSRIPHKKLGNGNATKPSSTGKLPAKGSTRQRLHPGLL 300

Query: 301 SSQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNYETMRLQTNKPL 360
           S QDR+VSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVN+ETMRLQTNKPL
Sbjct: 301 SGQDRSVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNFETMRLQTNKPL 360

Query: 361 QLATCQDSALVFAPCMTTVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPD------QELYT 420
           QLAT QDS+LVFAPCM TVKAFDMWTGKTSLT SGHYEGVNCCWYNFPD      QELYT
Sbjct: 361 QLATSQDSSLVFAPCMATVKAFDMWTGKTSLTLSGHYEGVNCCWYNFPDQFCNVPQELYT 420

Query: 421 GGNDRQILVWSPSRNSTEL 434
           GGNDRQILVWSPSRNSTEL
Sbjct: 421 GGNDRQILVWSPSRNSTEL 439

The following BLAST results are available for this feature:
BLAST of Lsi08G015280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ERCC8_MOUSE1.3e-4238.12DNA excision repair protein ERCC-8 OS=Mus musculus GN=Ercc8 PE=2 SV=2[more]
ERCC8_BOVIN1.7e-4238.57DNA excision repair protein ERCC-8 OS=Bos taurus GN=ERCC8 PE=2 SV=1[more]
ERCC8_HUMAN8.3e-4236.32DNA excision repair protein ERCC-8 OS=Homo sapiens GN=ERCC8 PE=1 SV=1[more]
CKN1_SCHPO4.6e-3232.23DNA excision repair protein ckn1 OS=Schizosaccharomyces pombe (strain 972 / ATCC... [more]
YY46_NOSS12.0e-1926.53Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7... [more]
BLAST of Lsi08G015280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LL05_CUCSA3.0e-24897.46Uncharacterized protein OS=Cucumis sativus GN=Csa_2G354740 PE=4 SV=1[more]
E0CP23_VITVI9.5e-20278.40Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g09100 PE=4 SV=... [more]
M5XD14_PRUPE8.0e-20180.09Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005733mg PE=4 SV=1[more]
A0A0D2S5Z1_GOSRA2.6e-19978.00Uncharacterized protein OS=Gossypium raimondii GN=B456_009G219900 PE=4 SV=1[more]
A0A0D2QKW2_GOSRA5.7e-19978.62Uncharacterized protein OS=Gossypium raimondii GN=B456_009G219900 PE=4 SV=1[more]
BLAST of Lsi08G015280 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G27840.35.5e-17771.56 Transducin/WD40 repeat-like superfamily protein[more]
AT1G19750.17.7e-17168.93 Transducin/WD40 repeat-like superfamily protein[more]
AT5G50230.12.0e-0923.05 Transducin/WD40 repeat-like superfamily protein[more]
AT5G64730.13.8e-0827.82 Transducin/WD40 repeat-like superfamily protein[more]
AT5G16750.17.1e-0724.31 Transducin family protein / WD-40 repeat family protein[more]
BLAST of Lsi08G015280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449450283|ref|XP_004142893.1|4.3e-24897.46PREDICTED: DNA excision repair protein ERCC-8 isoform X2 [Cucumis sativus][more]
gi|778670991|ref|XP_011649570.1|4.3e-24897.46PREDICTED: DNA excision repair protein ERCC-8 isoform X1 [Cucumis sativus][more]
gi|659087635|ref|XP_008444554.1|5.6e-24897.46PREDICTED: DNA excision repair protein ERCC-8-like isoform X2 [Cucumis melo][more]
gi|659087641|ref|XP_008444557.1|5.6e-24897.46PREDICTED: DNA excision repair protein ERCC-8-like isoform X5 [Cucumis melo][more]
gi|659087637|ref|XP_008444555.1|5.3e-24696.13PREDICTED: DNA excision repair protein ERCC-8-like isoform X3 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042967 acyl-carrier-protein biosynthetic process
biological_process GO:0016573 histone acetylation
biological_process GO:0008150 biological_process
cellular_component GO:0000123 histone acetyltransferase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0004402 histone acetyltransferase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G015280.1Lsi08G015280.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 181..217
score: 5.2E-7coord: 308..338
score: 0.0054coord: 388..425
score: 0.0035coord: 98..130
score: 0
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 85..130
score: 0.0011coord: 386..425
score: 2.8E-4coord: 300..338
score: 5.7E-4coord: 177..217
score: 5.1E-8coord: 32..72
score:
IPR001680WD40 repeatPROFILEPS50082WD_REPEATS_2coord: 184..226
score: 13.85coord: 393..434
score: 9.472coord: 97..139
score: 11.21coord: 306..347
score: 13
IPR015943WD40/YVTN repeat-like-containing domainGENE3DG3DSA:2.130.10.10coord: 307..426
score: 2.3E-49coord: 36..234
score: 2.3
IPR017986WD40-repeat-containing domainPROFILEPS50294WD_REPEATS_REGIONcoord: 39..434
score: 23
IPR017986WD40-repeat-containing domainunknownSSF50978WD40 repeat-likecoord: 308..436
score: 1.01E-48coord: 39..228
score: 1.01
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 325..339
score: -coord: 204..218
scor
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 117..131
score: 1.5E-6coord: 204..218
score: 1.5E-6coord: 325..339
score: 1.
NoneNo IPR availablePANTHERPTHR22850WD40 REPEAT FAMILYcoord: 295..432
score: 3.4E-118coord: 36..230
score: 3.4E
NoneNo IPR availablePANTHERPTHR22850:SF2COMPONENT OF GEMS PROTEIN 5coord: 295..432
score: 3.4E-118coord: 36..230
score: 3.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi08G015280Csa2G354740Cucumber (Chinese Long) v2culsiB142
Lsi08G015280CSPI02G18540Wild cucumber (PI 183967)cpilsiB141
Lsi08G015280Cucsa.395630Cucumber (Gy14) v1cgylsiB637
Lsi08G015280CmaCh12G005990Cucurbita maxima (Rimu)cmalsiB184
Lsi08G015280CmoCh12G005390Cucurbita moschata (Rifu)cmolsiB175
Lsi08G015280Cla022627Watermelon (97103) v1lsiwmB465
Lsi08G015280MELO3C010806Melon (DHL92) v3.5.1lsimeB469
Lsi08G015280ClCG08G016470Watermelon (Charleston Gray)lsiwcgB438
Lsi08G015280MELO3C010806.2Melon (DHL92) v3.6.1lsimedB489
Lsi08G015280Cla97C08G160180Watermelon (97103) v2lsiwmbB444
Lsi08G015280Bhi04G000394Wax gourdlsiwgoB591
Lsi08G015280Cp4.1LG07g04820Cucurbita pepo (Zucchini)cpelsiB685
Lsi08G015280CsGy2G018430Cucumber (Gy14) v2cgyblsiB129
Lsi08G015280Carg16391Silver-seed gourdcarlsiB415
Lsi08G015280CsaV3_2G026140Cucumber (Chinese Long) v3cuclsiB155
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi08G015280Watermelon (97103) v2lsiwmbB422
Lsi08G015280Watermelon (97103) v2lsiwmbB433
Lsi08G015280Watermelon (97103) v2lsiwmbB435
Lsi08G015280Wax gourdlsiwgoB613
Lsi08G015280Wax gourdlsiwgoB627
Lsi08G015280Bottle gourd (USVL1VR-Ls)lsilsiB087
Lsi08G015280Bottle gourd (USVL1VR-Ls)lsilsiB135
Lsi08G015280Bottle gourd (USVL1VR-Ls)lsilsiB148
Lsi08G015280Cucumber (Gy14) v1cgylsiB129
Lsi08G015280Cucumber (Gy14) v1cgylsiB370
Lsi08G015280Cucumber (Gy14) v1cgylsiB571
Lsi08G015280Cucurbita maxima (Rimu)cmalsiB032
Lsi08G015280Cucurbita maxima (Rimu)cmalsiB153
Lsi08G015280Cucurbita maxima (Rimu)cmalsiB456
Lsi08G015280Cucurbita maxima (Rimu)cmalsiB498
Lsi08G015280Cucurbita maxima (Rimu)cmalsiB621
Lsi08G015280Cucurbita maxima (Rimu)cmalsiB739
Lsi08G015280Cucurbita maxima (Rimu)cmalsiB809
Lsi08G015280Cucurbita moschata (Rifu)cmolsiB020
Lsi08G015280Cucurbita moschata (Rifu)cmolsiB140
Lsi08G015280Cucurbita moschata (Rifu)cmolsiB442
Lsi08G015280Cucurbita moschata (Rifu)cmolsiB482
Lsi08G015280Cucurbita moschata (Rifu)cmolsiB609
Lsi08G015280Cucurbita moschata (Rifu)cmolsiB731
Lsi08G015280Cucurbita moschata (Rifu)cmolsiB795
Lsi08G015280Cucurbita pepo (Zucchini)cpelsiB067
Lsi08G015280Cucurbita pepo (Zucchini)cpelsiB100
Lsi08G015280Cucurbita pepo (Zucchini)cpelsiB409
Lsi08G015280Cucurbita pepo (Zucchini)cpelsiB477
Lsi08G015280Cucurbita pepo (Zucchini)cpelsiB644
Lsi08G015280Wild cucumber (PI 183967)cpilsiB316
Lsi08G015280Wild cucumber (PI 183967)cpilsiB482
Lsi08G015280Wild cucumber (PI 183967)cpilsiB550
Lsi08G015280Cucumber (Chinese Long) v2culsiB317
Lsi08G015280Cucumber (Chinese Long) v2culsiB474
Lsi08G015280Cucumber (Chinese Long) v2culsiB535
Lsi08G015280Melon (DHL92) v3.5.1lsimeB466
Lsi08G015280Melon (DHL92) v3.5.1lsimeB488
Lsi08G015280Melon (DHL92) v3.5.1lsimeB490
Lsi08G015280Watermelon (Charleston Gray)lsiwcgB425
Lsi08G015280Watermelon (Charleston Gray)lsiwcgB430
Lsi08G015280Watermelon (Charleston Gray)lsiwcgB431
Lsi08G015280Watermelon (97103) v1lsiwmB480
Lsi08G015280Watermelon (97103) v1lsiwmB488
Lsi08G015280Cucumber (Gy14) v2cgyblsiB289
Lsi08G015280Cucumber (Gy14) v2cgyblsiB441
Lsi08G015280Cucumber (Gy14) v2cgyblsiB505
Lsi08G015280Melon (DHL92) v3.6.1lsimedB507
Lsi08G015280Melon (DHL92) v3.6.1lsimedB509
Lsi08G015280Silver-seed gourdcarlsiB003
Lsi08G015280Silver-seed gourdcarlsiB164
Lsi08G015280Silver-seed gourdcarlsiB295
Lsi08G015280Silver-seed gourdcarlsiB372
Lsi08G015280Silver-seed gourdcarlsiB710
Lsi08G015280Cucumber (Chinese Long) v3cuclsiB336
Lsi08G015280Cucumber (Chinese Long) v3cuclsiB504
Lsi08G015280Cucumber (Chinese Long) v3cuclsiB573