Lsi08G014570 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCTGCTATATATCTTCTCCCTGTTTCCATTTCGCACAGAGACCAAACCCTAAGAACAAAGGAAGAAGAAGAGACCGACCACGGGGATCGCAAACCTCACATATGAGGAATGTCGTCGCAAGAGACTCCAAGAAAACAAGAAGCGAATGGAAGCCCTAAATTTGCCATTGCTTTCTCAAGCTCTCCTCGATTCTTCCCCTTCCAAGTCCTCACCTGTAATTCCATTGCGTTTTTATTTCTGTTTCCTTGTCTCTTATTACGCTCTTTTTCTCAATACTTCACCTATCCGCAGAGTAAGCTCACCAAGCCTCGCGTGACTCAGAAACAACTCGTGGTGGTGAGGAGGTCCAGTCGCGTAGCGAAACAGTCAGCTCCTGTTTATGCCGAAGTGAGTCATTCTTGTCTAATTTTCCACGCTCTTGGATGATGGATTACAGTTTACTGCTGCTTTATATGGAGAGAGGTTTTAATCCTCAAAATCCCCTTTTCACTGGTTCGGTTTTCATCCGTGTTTAATTAATCTGGCAGGTTGTTGTAAATCGCGTGGTGATTCCTAGAAGGTATCTATATGCTAAAAAGGAATTTAAAATGGAAATCAACGACTTTTCATATCGTTGAATCAAGTAGTATTGTCACTCATTTTCATTTTTGGGGATTGTAGGGTCTCTAAAGCTAGAGATTTGTCAAACCGGGTATATGCTTCGGATGAAGCGAGACAAAATGCTTTTGAAAGAGCTGAGCAACTACAATCTGGGTTGGAGCCAAATTATCCCAACTTTATAAAGTCAATGCTTCAGTCTCATGTTAGTGGTGGATTTTGGCTGGTAAGCTTGTGAGGATTATTTGTTAAGCAAATGACTTCCTTCTCTATCCCTCTCTCTTTTAAGCTTGTTGAACTGGATGTGTGATATTACTGTATATTAAATCAATGGAGAAGGCTGATTTTCTATAGCTTGTTTGAGTATTTTAATATGTAAAGGCTATTATAATAGAATGCGAGGATAATTACAGTTTCTTCTTCTGTGAGATAATATCTAATTGAAAAATACTTGTAAACACAGGGCCTTCCTTCTTATTTCTGCAAGATTCACCTTCCAAGTCGTGATGGAGTAATGACTTTAATAGATGAAGATGGCGATGAGTATCCGACAATATATTTAGCACGAAAAACAGGACTTAGTGGCGGATGGAAAGGTTTTTCAGTTGCTCATAAGTTGGCAGATGGGGATGCTGTGGTTTTTCAATTCATTAAACCTACAATATGCAAGGTTTTTCCTTCATCTCTTTGCTGGTTTCAAGATCCTTTGAACCATGTCTTGCTTGTCTGCCGTCTCTGTGCATACCTTCAATGCATAAATGCACATTCTTTTGTTTACTGTCACTTCAATTCTCATTTTTTTAAAAAGTAAGGCTGTGGTGTTGTTCACCATTTATCTGTCTCATTTTCAAAAACTATTTTTCATGTTATACCTAAATTTTAAGTCATTGATTTTGAAAAGCCTTTTTTTGGTCCCTTTATTTCATTTTTATTTTATTTTTAAGGAACTAAAATAAACCAAAATTGAAAAATATAAGATCAAAATGAACATTTTGAAAATATAAGGATCAAAATGACTCGAGGGACTAAAATATTCTTTAAACTTTTCTTTTTAAAAAAAATCGTAATAACTGGTATGATCTACATCTTTTTGTGGGTGCGACTAAACAAGCTTCACCCCACCCCACGCATTCATAGATATAATATCTCTTTTCCCATAATTTCTTTTTCAGGTGTACATTCTTAGGGCGAATAGTTCCAGAGAAGATAGTGATTCTAACAGTAGCTAAATGATTGACATTTCTTTTCCGAGATCAGGTAATCTTAAAGCAAACTCACTTCCTTCTGATGGATGTCCCTTTGTAATTGCTGCAATTCTATTGAACTTTTGAGCTTGGCAAGAGTCAGCCTCCCATTGATTGGTTGGGGTCTTGTTTTTGTTATTGGTTTTTTTTTTTAATACATGTTTAAAAATTAAAACCACAATCCCTGCTATTCTAAGTGATTAAATGCTATTATTAATTTCAGGTAAGAGGTAGCCTGATGGGAAGTGCACATAATGCAACTACTTTTTGTCATGTTGGTTTTGGAGTAGAATGCAATCTCTGTCTTGTACAATCAGTGTCTATGAAGAAAATGCAAGCACTATGTAGTAGTGATTGTCTGTTGTAGTGGTGTGGTGTATTCAAATCTATCCTGTACTCTGTCTTCTTCTCTTCTTTTATTCTCTCTCTCAAACCCCCTTTTTTAGCTCAGGCTACAGTTCTAGCTTATAGATTTAACTGATTTTGAAAGAGCAAGCCTCCAAGTTTAAAGTGGATGAGTCTTAGCTCTTCATGATGGTGTAAGCTTATGAACCGAAGTCAACATTTTCTGTGTTATGTGGTAGATTGTAATTGCTAATTAGCATAATTATCTCA CTCTGCTATATATCTTCTCCCTGTTTCCATTTCGCACAGAGACCAAACCCTAAGAACAAAGGAAGAAGAAGAGACCGACCACGGGGATCGCAAACCTCACATATGAGGAATGTCGTCGCAAGAGACTCCAAGAAAACAAGAAGCGAATGGAAGCCCTAAATTTGCCATTGCTTTCTCAAGCTCTCCTCGATTCTTCCCCTTCCAAGTCCTCACCTAGTAAGCTCACCAAGCCTCGCGTGACTCAGAAACAACTCGTGGTGGTGAGGAGGTCCAGTCGCGTAGCGAAACAGTCAGCTCCTGTTTATGCCGAAGTTGTTGTAAATCGCGTGGTGATTCCTAGAAGGGTCTCTAAAGCTAGAGATTTGTCAAACCGGGTATATGCTTCGGATGAAGCGAGACAAAATGCTTTTGAAAGAGCTGAGCAACTACAATCTGGGTTGGAGCCAAATTATCCCAACTTTATAAAGTCAATGCTTCAGTCTCATGTTAGTGGTGGATTTTGGCTGGGCCTTCCTTCTTATTTCTGCAAGATTCACCTTCCAAGTCGTGATGGAGTAATGACTTTAATAGATGAAGATGGCGATGAGTATCCGACAATATATTTAGCACGAAAAACAGGACTTAGTGGCGGATGGAAAGGTTTTTCAGTTGCTCATAAGTTGGCAGATGGGGATGCTGTGGTTTTTCAATTCATTAAACCTACAATATGCAAGGTAAGAGGTAGCCTGATGGGAAGTGCACATAATGCAACTACTTTTTGTCATGTTGGTTTTGGAGTAGAATGCAATCTCTGTCTTGTACAATCAGTGTCTATGAAGAAAATGCAAGCACTATGTAGTAGTGATTGTCTGTTGTAGTGGTGTGGTGTATTCAAATCTATCCTGTACTCTGTCTTCTTCTCTTCTTTTATTCTCTCTCTCAAACCCCCTTTTTTAGCTCAGGCTACAGTTCTAGCTTATAGATTTAACTGATTTTGAAAGAGCAAGCCTCCAAGTTTAAAGTGGATGAGTCTTAGCTCTTCATGATGGTGTAAGCTTATGAACCGAAGTCAACATTTTCTGTGTTATGTGGTAGATTGTAATTGCTAATTAGCATAATTATCTCA ATGGAAGCCCTAAATTTGCCATTGCTTTCTCAAGCTCTCCTCGATTCTTCCCCTTCCAAGTCCTCACCTAGTAAGCTCACCAAGCCTCGCGTGACTCAGAAACAACTCGTGGTGGTGAGGAGGTCCAGTCGCGTAGCGAAACAGTCAGCTCCTGTTTATGCCGAAGTTGTTGTAAATCGCGTGGTGATTCCTAGAAGGGTCTCTAAAGCTAGAGATTTGTCAAACCGGGTATATGCTTCGGATGAAGCGAGACAAAATGCTTTTGAAAGAGCTGAGCAACTACAATCTGGGTTGGAGCCAAATTATCCCAACTTTATAAAGTCAATGCTTCAGTCTCATGTTAGTGGTGGATTTTGGCTGGGCCTTCCTTCTTATTTCTGCAAGATTCACCTTCCAAGTCGTGATGGAGTAATGACTTTAATAGATGAAGATGGCGATGAGTATCCGACAATATATTTAGCACGAAAAACAGGACTTAGTGGCGGATGGAAAGGTTTTTCAGTTGCTCATAAGTTGGCAGATGGGGATGCTGTGGTTTTTCAATTCATTAAACCTACAATATGCAAGGTAAGAGGTAGCCTGATGGGAAGTGCACATAATGCAACTACTTTTTGTCATGTTGGTTTTGGAGTAGAATGCAATCTCTGTCTTGTACAATCAGTGTCTATGAAGAAAATGCAAGCACTATGTAGTAGTGATTGTCTGTTGTAG MEALNLPLLSQALLDSSPSKSSPSKLTKPRVTQKQLVVVRRSSRVAKQSAPVYAEVVVNRVVIPRRVSKARDLSNRVYASDEARQNAFERAEQLQSGLEPNYPNFIKSMLQSHVSGGFWLGLPSYFCKIHLPSRDGVMTLIDEDGDEYPTIYLARKTGLSGGWKGFSVAHKLADGDAVVFQFIKPTICKVRGSLMGSAHNATTFCHVGFGVECNLCLVQSVSMKKMQALCSSDCLL
BLAST of Lsi08G014570 vs. Swiss-Prot
Match: Y5270_ARATH (B3 domain-containing protein At5g42700 OS=Arabidopsis thaliana GN=At5g42700 PE=2 SV=2) HSP 1 Score: 186.4 bits (472), Expect = 3.5e-46 Identity = 105/197 (53.30%), Postives = 126/197 (63.96%), Query Frame = 1
BLAST of Lsi08G014570 vs. Swiss-Prot
Match: Y3918_ARATH (B3 domain-containing protein At3g19184 OS=Arabidopsis thaliana GN=At3g19184 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 8.7e-45 Identity = 106/194 (54.64%), Postives = 129/194 (66.49%), Query Frame = 1
BLAST of Lsi08G014570 vs. Swiss-Prot
Match: Y6944_ORYSJ (B3 domain-containing protein Os06g0194400 OS=Oryza sativa subsp. japonica GN=Os06g0194400 PE=2 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 4.6e-38 Identity = 95/197 (48.22%), Postives = 124/197 (62.94%), Query Frame = 1
BLAST of Lsi08G014570 vs. Swiss-Prot
Match: Y3845_ORYSJ (B3 domain-containing protein Os03g0184500 OS=Oryza sativa subsp. japonica GN=Os03g0184500 PE=2 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 8.7e-37 Identity = 90/197 (45.69%), Postives = 120/197 (60.91%), Query Frame = 1
BLAST of Lsi08G014570 vs. Swiss-Prot
Match: Y5814_ORYSJ (B3 domain-containing protein Os05g0481400 OS=Oryza sativa subsp. japonica GN=Os05g0481400 PE=2 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.6e-33 Identity = 80/197 (40.61%), Postives = 124/197 (62.94%), Query Frame = 1
BLAST of Lsi08G014570 vs. TrEMBL
Match: A0A0A0LNH0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359980 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 1.6e-93 Identity = 173/190 (91.05%), Postives = 186/190 (97.89%), Query Frame = 1
BLAST of Lsi08G014570 vs. TrEMBL
Match: A0A0A0LKX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G359985 PE=4 SV=1) HSP 1 Score: 293.9 bits (751), Expect = 1.8e-76 Identity = 150/190 (78.95%), Postives = 163/190 (85.79%), Query Frame = 1
BLAST of Lsi08G014570 vs. TrEMBL
Match: A0A061FCQ7_THECC (AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao GN=TCM_033870 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 3.9e-68 Identity = 139/191 (72.77%), Postives = 157/191 (82.20%), Query Frame = 1
BLAST of Lsi08G014570 vs. TrEMBL
Match: A0A151TBU3_CAJCA (B3 domain-containing protein At5g42700 family OS=Cajanus cajan GN=KK1_019122 PE=4 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 4.3e-67 Identity = 138/192 (71.88%), Postives = 157/192 (81.77%), Query Frame = 1
BLAST of Lsi08G014570 vs. TrEMBL
Match: A0A0D2QCC6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G131600 PE=4 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 5.6e-67 Identity = 134/190 (70.53%), Postives = 158/190 (83.16%), Query Frame = 1
BLAST of Lsi08G014570 vs. TAIR10
Match: AT5G42700.1 (AT5G42700.1 AP2/B3-like transcriptional factor family protein) HSP 1 Score: 186.4 bits (472), Expect = 2.0e-47 Identity = 105/197 (53.30%), Postives = 126/197 (63.96%), Query Frame = 1
BLAST of Lsi08G014570 vs. TAIR10
Match: AT3G19184.1 (AT3G19184.1 AP2/B3-like transcriptional factor family protein) HSP 1 Score: 181.8 bits (460), Expect = 4.9e-46 Identity = 106/194 (54.64%), Postives = 129/194 (66.49%), Query Frame = 1
BLAST of Lsi08G014570 vs. TAIR10
Match: AT5G58280.1 (AT5G58280.1 AP2/B3-like transcriptional factor family protein) HSP 1 Score: 116.7 bits (291), Expect = 1.9e-26 Identity = 66/161 (40.99%), Postives = 94/161 (58.39%), Query Frame = 1
BLAST of Lsi08G014570 vs. NCBI nr
Match: gi|659087782|ref|XP_008444633.1| (PREDICTED: B3 domain-containing protein At5g42700-like [Cucumis melo]) HSP 1 Score: 359.0 bits (920), Expect = 6.4e-96 Identity = 180/202 (89.11%), Postives = 195/202 (96.53%), Query Frame = 1
BLAST of Lsi08G014570 vs. NCBI nr
Match: gi|449470057|ref|XP_004152735.1| (PREDICTED: B3 domain-containing protein At5g42700-like [Cucumis sativus]) HSP 1 Score: 350.5 bits (898), Expect = 2.3e-93 Identity = 173/190 (91.05%), Postives = 186/190 (97.89%), Query Frame = 1
BLAST of Lsi08G014570 vs. NCBI nr
Match: gi|700207411|gb|KGN62530.1| (hypothetical protein Csa_2G359985 [Cucumis sativus]) HSP 1 Score: 293.9 bits (751), Expect = 2.5e-76 Identity = 150/190 (78.95%), Postives = 163/190 (85.79%), Query Frame = 1
BLAST of Lsi08G014570 vs. NCBI nr
Match: gi|1009136289|ref|XP_015885454.1| (PREDICTED: B3 domain-containing protein At5g42700-like [Ziziphus jujuba]) HSP 1 Score: 274.6 bits (701), Expect = 1.6e-70 Identity = 138/191 (72.25%), Postives = 162/191 (84.82%), Query Frame = 1
BLAST of Lsi08G014570 vs. NCBI nr
Match: gi|590592460|ref|XP_007017287.1| (AP2/B3-like transcriptional factor family protein, putative [Theobroma cacao]) HSP 1 Score: 266.2 bits (679), Expect = 5.6e-68 Identity = 139/191 (72.77%), Postives = 157/191 (82.20%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |