Lsi08G012840 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi08G012840
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing family protein
Locationchr08 : 21213724 .. 21215607 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATTTTTGTCTCGATGTTGCTCCTTGTTTCTGTTTCCTACCGGAATCTCTGTCCGCCTTCACCGAGATTCTTCAATTCTGTACAATTTCTTCATCCAGTCGAGAACGCAATACCCACTTCTTCTTCGGTCATATCACCTGATCCGTCAATGTCCAACTGCAGAAGCGCTTGTTTCAGCTTTACTGATCGCTGTAAACTCTTGCACTTCCATCTCCAATTGCCGGGAAATTCATACCCGAGTAATCAAATCTTTGCTTTATAGAGAGGGGTTCATTGGGGATCAGCTGGTCACGTGTTATAATAAACTGGGTTATGTTGACGATGCACAGAAGCTGTTTGATGATATGCCTGATAAAGATTTAATTTCTTGGAACTCACTGATTTCTGGTTTTTCTCGGTGTCTTGATATGACTCTCAAAGCATTTTATACCATGAAGTTTGAAATGTCAGTTAAACCCAATGAGGTCACAATTCTATCGATGATATCGGCTTGCAATGGAGCTTTGGATACAGGGAAGTATGTTCATGGTTTTGCAATTAAAGTTGGTGTTTCTTTGGAAGTTAAGGTTGTTAATTCCCTCATTAACATGTATGGAAAGTCCGGAGATTTAACGTCAGCTTGTAGATTATTTGAGGCCATTGCAGACCCAAATACAGTATCTTGGAATTCAATCATTGCTGCCCAAGTTACTAATGGCTGTGCACGAGAAGGACTTGATTGTTTTAATAAGATGAGAAGGTTTGGAATTGAGCCGGATGAAGGAACTATCCTGGCACTGCTTCAAGCTTGCGTACATTCGGGTGTAGGAAAATTGGCAGAAAGCATTCATGGTTTAATCTTCTGCTCTGGTCTAGGCGCAAAAATCACCATAGCAACTGCACTTTTAGATTTGTATGCGAAATTGGGAAGATTAAGTGCTTCATATGACATCTTTAGGGAGGTGGGTTGTGCTGATAGAGTTGCTTGGACTGCCATGCTTGCAGGATATGCAGCACATGGATTGGGTAGAGAAGCAATCAAGCTTTTTGAGAGCATGGCCAAGAAAGGTTTGGAGCCTGATCATGTGACATTTACTCATTTGCTTAGCGCGTGTAGTCATTCAGGGCTAGTCAGAGAAGGGAAAAGTTATTTCAATATGATGTCTGAAGTGTATGGAATTGAGCCCAGAATAGATCATTATTCATGTATGGTTGATCTACTCGGTCGCTGCGGACTTTTGAACGATGCTTATGAGGTGATACGAAACATGCCTATGGAGCCCAATGCTGGCGTGTGGGGTGCTCTTCTCGGTGCTTGTAGGGTCTATGGTAACATTGAACTTGGTAAGGAAGTTGCAGAGCATTTGATTCATTTGGAACCTCTGGACCCCAGAAACTATATCATGTTATCAAATATGTATTCTGCATCTCGTTCTTGGAAGGATGCTGCCAAAGTGAGGGCCTTGCTAAAGGAGAGAGGTCTGAAAAGAACCCCAGGATGTAGCTCCATTGAATATGGAAACAAGATCCATCGCTTCTTCGTGGGCGATCGATCTCACCCTGAGACGGAGAAGATCTATGCCAAGCTTGAAGAATTGCTCGGAAAAATGAGGCAAGCTGGATATAGTTCCAAAACAGAATATGTTCTGCAAGACGTTGAAGAGGAAGTCAAGGAGGATATGATAAACAAGCACAGCGAGAAGTTAGCCCTTGCTTTCGGGCTTTTGGTGAGCAAAGAAGGTGCACCTTTAATCATTACAAAGAATCTTAGAATTTGTGGAGATTGTCATAGCACTGCAAAGCTCATATCATTGATTGAGAAGCGTACCATTATTATCCGAGATCCAAAACGCTTTCATCATTTCTCTGATGGATTCTGTTCTTGTGCAGATTACTGGTAA

mRNA sequence

ATGGTATTTTTGTCTCGATGTTGCTCCTTGTTTCTGTTTCCTACCGGAATCTCTGTCCGCCTTCACCGAGATTCTTCAATTCTGTACAATTTCTTCATCCAGTCGAGAACGCAATACCCACTTCTTCTTCGGTCATATCACCTGATCCGTCAATGTCCAACTGCAGAAGCGCTTGTTTCAGCTTTACTGATCGCTGTAAACTCTTGCACTTCCATCTCCAATTGCCGGGAAATTCATACCCGAGTAATCAAATCTTTGCTTTATAGAGAGGGGTTCATTGGGGATCAGCTGGTCACGTGTTATAATAAACTGGGTTATGTTGACGATGCACAGAAGCTGTTTGATGATATGCCTGATAAAGATTTAATTTCTTGGAACTCACTGATTTCTGGTTTTTCTCGGTGTCTTGATATGACTCTCAAAGCATTTTATACCATGAAGTTTGAAATGTCAGTTAAACCCAATGAGGTCACAATTCTATCGATGATATCGGCTTGCAATGGAGCTTTGGATACAGGGAAGTATGTTCATGGTTTTGCAATTAAAGTTGGTGTTTCTTTGGAAGTTAAGGTTGTTAATTCCCTCATTAACATGTATGGAAAGTCCGGAGATTTAACGTCAGCTTGTAGATTATTTGAGGCCATTGCAGACCCAAATACAGTATCTTGGAATTCAATCATTGCTGCCCAAGTTACTAATGGCTGTGCACGAGAAGGACTTGATTGTTTTAATAAGATGAGAAGGTTTGGAATTGAGCCGGATGAAGGAACTATCCTGGCACTGCTTCAAGCTTGCGTACATTCGGGTGTAGGAAAATTGGCAGAAAGCATTCATGGTTTAATCTTCTGCTCTGGTCTAGGCGCAAAAATCACCATAGCAACTGCACTTTTAGATTTGTATGCGAAATTGGGAAGATTAAGTGCTTCATATGACATCTTTAGGGAGGTGGGTTGTGCTGATAGAGTTGCTTGGACTGCCATGCTTGCAGGATATGCAGCACATGGATTGGGTAGAGAAGCAATCAAGCTTTTTGAGAGCATGGCCAAGAAAGGTTTGGAGCCTGATCATGTGACATTTACTCATTTGCTTAGCGCGTGTAGTCATTCAGGGCTAGTCAGAGAAGGGAAAAGTTATTTCAATATGATGTCTGAAGTGTATGGAATTGAGCCCAGAATAGATCATTATTCATGTATGGTTGATCTACTCGGTCGCTGCGGACTTTTGAACGATGCTTATGAGGTGATACGAAACATGCCTATGGAGCCCAATGCTGGCGTGTGGGGTGCTCTTCTCGGTGCTTGTAGGGTCTATGGTAACATTGAACTTGGTAAGGAAGTTGCAGAGCATTTGATTCATTTGGAACCTCTGGACCCCAGAAACTATATCATGTTATCAAATATGTATTCTGCATCTCGTTCTTGGAAGGATGCTGCCAAAGTGAGGGCCTTGCTAAAGGAGAGAGGTCTGAAAAGAACCCCAGGATGTAGCTCCATTGAATATGGAAACAAGATCCATCGCTTCTTCGTGGGCGATCGATCTCACCCTGAGACGGAGAAGATCTATGCCAAGCTTGAAGAATTGCTCGGAAAAATGAGGCAAGCTGGATATAGTTCCAAAACAGAATATGTTCTGCAAGACGTTGAAGAGGAAGTCAAGGAGGATATGATAAACAAGCACAGCGAGAAGTTAGCCCTTGCTTTCGGGCTTTTGGTGAGCAAAGAAGGTGCACCTTTAATCATTACAAAGAATCTTAGAATTTGTGGAGATTGTCATAGCACTGCAAAGCTCATATCATTGATTGAGAAGCGTACCATTATTATCCGAGATCCAAAACGCTTTCATCATTTCTCTGATGGATTCTGTTCTTGTGCAGATTACTGGTAA

Coding sequence (CDS)

ATGGTATTTTTGTCTCGATGTTGCTCCTTGTTTCTGTTTCCTACCGGAATCTCTGTCCGCCTTCACCGAGATTCTTCAATTCTGTACAATTTCTTCATCCAGTCGAGAACGCAATACCCACTTCTTCTTCGGTCATATCACCTGATCCGTCAATGTCCAACTGCAGAAGCGCTTGTTTCAGCTTTACTGATCGCTGTAAACTCTTGCACTTCCATCTCCAATTGCCGGGAAATTCATACCCGAGTAATCAAATCTTTGCTTTATAGAGAGGGGTTCATTGGGGATCAGCTGGTCACGTGTTATAATAAACTGGGTTATGTTGACGATGCACAGAAGCTGTTTGATGATATGCCTGATAAAGATTTAATTTCTTGGAACTCACTGATTTCTGGTTTTTCTCGGTGTCTTGATATGACTCTCAAAGCATTTTATACCATGAAGTTTGAAATGTCAGTTAAACCCAATGAGGTCACAATTCTATCGATGATATCGGCTTGCAATGGAGCTTTGGATACAGGGAAGTATGTTCATGGTTTTGCAATTAAAGTTGGTGTTTCTTTGGAAGTTAAGGTTGTTAATTCCCTCATTAACATGTATGGAAAGTCCGGAGATTTAACGTCAGCTTGTAGATTATTTGAGGCCATTGCAGACCCAAATACAGTATCTTGGAATTCAATCATTGCTGCCCAAGTTACTAATGGCTGTGCACGAGAAGGACTTGATTGTTTTAATAAGATGAGAAGGTTTGGAATTGAGCCGGATGAAGGAACTATCCTGGCACTGCTTCAAGCTTGCGTACATTCGGGTGTAGGAAAATTGGCAGAAAGCATTCATGGTTTAATCTTCTGCTCTGGTCTAGGCGCAAAAATCACCATAGCAACTGCACTTTTAGATTTGTATGCGAAATTGGGAAGATTAAGTGCTTCATATGACATCTTTAGGGAGGTGGGTTGTGCTGATAGAGTTGCTTGGACTGCCATGCTTGCAGGATATGCAGCACATGGATTGGGTAGAGAAGCAATCAAGCTTTTTGAGAGCATGGCCAAGAAAGGTTTGGAGCCTGATCATGTGACATTTACTCATTTGCTTAGCGCGTGTAGTCATTCAGGGCTAGTCAGAGAAGGGAAAAGTTATTTCAATATGATGTCTGAAGTGTATGGAATTGAGCCCAGAATAGATCATTATTCATGTATGGTTGATCTACTCGGTCGCTGCGGACTTTTGAACGATGCTTATGAGGTGATACGAAACATGCCTATGGAGCCCAATGCTGGCGTGTGGGGTGCTCTTCTCGGTGCTTGTAGGGTCTATGGTAACATTGAACTTGGTAAGGAAGTTGCAGAGCATTTGATTCATTTGGAACCTCTGGACCCCAGAAACTATATCATGTTATCAAATATGTATTCTGCATCTCGTTCTTGGAAGGATGCTGCCAAAGTGAGGGCCTTGCTAAAGGAGAGAGGTCTGAAAAGAACCCCAGGATGTAGCTCCATTGAATATGGAAACAAGATCCATCGCTTCTTCGTGGGCGATCGATCTCACCCTGAGACGGAGAAGATCTATGCCAAGCTTGAAGAATTGCTCGGAAAAATGAGGCAAGCTGGATATAGTTCCAAAACAGAATATGTTCTGCAAGACGTTGAAGAGGAAGTCAAGGAGGATATGATAAACAAGCACAGCGAGAAGTTAGCCCTTGCTTTCGGGCTTTTGGTGAGCAAAGAAGGTGCACCTTTAATCATTACAAAGAATCTTAGAATTTGTGGAGATTGTCATAGCACTGCAAAGCTCATATCATTGATTGAGAAGCGTACCATTATTATCCGAGATCCAAAACGCTTTCATCATTTCTCTGATGGATTCTGTTCTTGTGCAGATTACTGGTAA

Protein sequence

MVFLSRCCSLFLFPTGISVRLHRDSSILYNFFIQSRTQYPLLLRSYHLIRQCPTAEALVSALLIAVNSCTSISNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFDDMPDKDLISWNSLISGFSRCLDMTLKAFYTMKFEMSVKPNEVTILSMISACNGALDTGKYVHGFAIKVGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSIIAAQVTNGCAREGLDCFNKMRRFGIEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLGAKITIATALLDLYAKLGRLSASYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESMAKKGLEPDHVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIRNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEELLGKMRQAGYSSKTEYVLQDVEEEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW
BLAST of Lsi08G012840 vs. Swiss-Prot
Match: PP411_ARATH (Pentatricopeptide repeat-containing protein At5g40410, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2 SV=1)

HSP 1 Score: 716.5 bits (1848), Expect = 2.6e-205
Identity = 352/581 (60.59%), Postives = 435/581 (74.87%), Query Frame = 1

Query: 56  EALVSALLIAVNSCTSISNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFD 115
           +A VS+L+ AV SC SI  CR +H +V+KS+ YR GFIGDQLV CY +LG+   A+KLFD
Sbjct: 31  DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFD 90

Query: 116 DMPDKDLISWNSLISGFS------RCLDMTLKAFYTMKFEMSVKPNEVTILSMISAC--N 175
           +MP++DL+SWNSLISG+S      +C ++  +   +   E+  +PNEVT LSMISAC   
Sbjct: 91  EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS---EVGFRPNEVTFLSMISACVYG 150

Query: 176 GALDTGKYVHGFAIKVGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSII 235
           G+ + G+ +HG  +K GV  EVKVVN+ IN YGK+GDLTS+C+LFE ++  N VSWN++I
Sbjct: 151 GSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 210

Query: 236 AAQVTNGCAREGLDCFNKMRRFGIEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLG 295
              + NG A +GL  FN  RR G EPD+ T LA+L++C   GV +LA+ IHGLI   G  
Sbjct: 211 VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS 270

Query: 296 AKITIATALLDLYAKLGRLSASYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESM 355
               I TALLDLY+KLGRL  S  +F E+   D +AWTAMLA YA HG GR+AIK FE M
Sbjct: 271 GNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM 330

Query: 356 AKKGLEPDHVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGL 415
              G+ PDHVTFTHLL+ACSHSGLV EGK YF  MS+ Y I+PR+DHYSCMVDLLGR GL
Sbjct: 331 VHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGL 390

Query: 416 LNDAYEVIRNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNM 475
           L DAY +I+ MPMEP++GVWGALLGACRVY + +LG + AE L  LEP D RNY+MLSN+
Sbjct: 391 LQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNI 450

Query: 476 YSASRSWKDAAKVRALLKERGLKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEEL 535
           YSAS  WKDA+++R L+K++GL R  GCS IE+GNKIH+F VGD SHPE+EKI  KL+E+
Sbjct: 451 YSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEI 510

Query: 536 LGKMR-QAGYSSKTEYVLQDVEEEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRI 595
             KM+ + GY SKTE+VL DV E+VKE+MIN+HSEK+A+AFGLLV     P+II KNLRI
Sbjct: 511 RKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRI 570

Query: 596 CGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 628
           CGDCH TAK ISLIEKR IIIRD KRFHHF DG CSC+DYW
Sbjct: 571 CGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608

BLAST of Lsi08G012840 vs. Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 3.7e-135
Identity = 231/537 (43.02%), Postives = 350/537 (65.18%), Query Frame = 1

Query: 97  LVTCYNKLGYVDDAQKLFDDMPDKDLISWNSLISGFSRCLDM--TLKAFYTMKFEMSVKP 156
           L+  Y   GY+++AQKLFD++P KD++SWN++ISG++   +    L+ F  M  + +V+P
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM-MKTNVRP 265

Query: 157 NEVTILSMISAC--NGALDTGKYVHGFAIKVGVSLEVKVVNSLINMYGKSGDLTSACRLF 216
           +E T+++++SAC  +G+++ G+ VH +    G    +K+VN+LI++Y K G+L +AC LF
Sbjct: 266 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 325

Query: 217 EAIADPNTVSWNSIIAAQVTNGCAREGLDCFNKMRRFGIEPDEGTILALLQACVHSGVGK 276
           E +   + +SWN++I         +E L  F +M R G  P++ T+L++L AC H G   
Sbjct: 326 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 385

Query: 277 LAESIHGLIF--CSGLGAKITIATALLDLYAKLGRLSASYDIFREVGCADRVAWTAMLAG 336
           +   IH  I     G+    ++ T+L+D+YAK G + A++ +F  +      +W AM+ G
Sbjct: 386 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 445

Query: 337 YAAHGLGREAIKLFESMAKKGLEPDHVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEP 396
           +A HG    +  LF  M K G++PD +TF  LLSACSHSG++  G+  F  M++ Y + P
Sbjct: 446 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTP 505

Query: 397 RIDHYSCMVDLLGRCGLLNDAYEVIRNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHL 456
           +++HY CM+DLLG  GL  +A E+I  M MEP+  +W +LL AC+++GN+ELG+  AE+L
Sbjct: 506 KLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENL 565

Query: 457 IHLEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGCSSIEYGNKIHRFFVG 516
           I +EP +P +Y++LSN+Y+++  W + AK RALL ++G+K+ PGCSSIE  + +H F +G
Sbjct: 566 IKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 625

Query: 517 DRSHPETEKIYAKLEELLGKMRQAGYSSKTEYVLQDVEEEVKEDMINKHSEKLALAFGLL 576
           D+ HP   +IY  LEE+   + +AG+   T  VLQ++EEE KE  +  HSEKLA+AFGL+
Sbjct: 626 DKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 685

Query: 577 VSKEGAPLIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 628
            +K G  L I KNLR+C +CH   KLIS I KR II RD  RFHHF DG CSC DYW
Sbjct: 686 STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

BLAST of Lsi08G012840 vs. Swiss-Prot
Match: PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 457.6 bits (1176), Expect = 2.2e-127
Identity = 229/576 (39.76%), Postives = 356/576 (61.81%), Query Frame = 1

Query: 59  VSALLIAVNSCTSISNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFDDMP 118
           V +LL A       +    IH+  IK  L  E F+ ++L+  Y + G + D QK+FD M 
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMY 309

Query: 119 DKDLISWNSLISGFSRCLDMTLKA---FYTMKFEMSVKPNEVTILSMISACN--GALDTG 178
            +DLISWNS+I  +    +  L+A   F  M+    ++P+ +T++S+ S  +  G +   
Sbjct: 310 VRDLISWNSIIKAYE-LNEQPLRAISLFQEMRLSR-IQPDCLTLISLASILSQLGDIRAC 369

Query: 179 KYVHGFAIKVGVSLE-VKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSIIAAQVT 238
           + V GF ++ G  LE + + N+++ MY K G + SA  +F  + + + +SWN+II+    
Sbjct: 370 RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQ 429

Query: 239 NGCAREGLDCFNKMRRFG-IEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLGAKIT 298
           NG A E ++ +N M   G I  ++GT +++L AC  +G  +    +HG +  +GL   + 
Sbjct: 430 NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVF 489

Query: 299 IATALLDLYAKLGRLSASYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESMAKKG 358
           + T+L D+Y K GRL  +  +F ++   + V W  ++A +  HG G +A+ LF+ M  +G
Sbjct: 490 VVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 549

Query: 359 LEPDHVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDA 418
           ++PDH+TF  LLSACSHSGLV EG+  F MM   YGI P + HY CMVD+ GR G L  A
Sbjct: 550 VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA 609

Query: 419 YEVIRNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYSAS 478
            + I++M ++P+A +WGALL ACRV+GN++LGK  +EHL  +EP     +++LSNMY+++
Sbjct: 610 LKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASA 669

Query: 479 RSWKDAAKVRALLKERGLKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEELLGKM 538
             W+   ++R++   +GL++TPG SS+E  NK+  F+ G+++HP  E++Y +L  L  K+
Sbjct: 670 GKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKL 729

Query: 539 RQAGYSSKTEYVLQDVEEEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRICGDCH 598
           +  GY     +VLQDVE++ KE ++  HSE+LA+AF L+ +     + I KNLR+CGDCH
Sbjct: 730 KMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCH 789

Query: 599 STAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 628
           S  K IS I +R II+RD  RFHHF +G CSC DYW
Sbjct: 790 SVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823

BLAST of Lsi08G012840 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 6.4e-127
Identity = 225/572 (39.34%), Postives = 354/572 (61.89%), Query Frame = 1

Query: 59  VSALLIAVNSCTSISNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFDDMP 118
           + ++L AV++   IS  +EIH   ++S       I   LV  Y K G ++ A++LFD M 
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298

Query: 119 DKDLISWNSLISGFSRCLD-MTLKAFYTMKFEMSVKPNEVTILSMISACN--GALDTGKY 178
           +++++SWNS+I  + +  +       +    +  VKP +V+++  + AC   G L+ G++
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358

Query: 179 VHGFAIKVGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSIIAAQVTNGC 238
           +H  ++++G+   V VVNSLI+MY K  ++ +A  +F  +     VSWN++I     NG 
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418

Query: 239 AREGLDCFNKMRRFGIEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLGAKITIATA 298
             + L+ F++MR   ++PD  T ++++ A     +   A+ IHG++  S L   + + TA
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478

Query: 299 LLDLYAKLGRLSASYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESMAKKGLEPD 358
           L+D+YAK G +  +  IF  +       W AM+ GY  HG G+ A++LFE M K  ++P+
Sbjct: 479 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 538

Query: 359 HVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVI 418
            VTF  ++SACSHSGLV  G   F MM E Y IE  +DHY  MVDLLGR G LN+A++ I
Sbjct: 539 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 598

Query: 419 RNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYSASRSWK 478
             MP++P   V+GA+LGAC+++ N+   ++ AE L  L P D   +++L+N+Y A+  W+
Sbjct: 599 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 658

Query: 479 DAAKVRALLKERGLKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEELLGKMRQAG 538
              +VR  +  +GL++TPGCS +E  N++H FF G  +HP+++KIYA LE+L+  +++AG
Sbjct: 659 KVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAG 718

Query: 539 YSSKTEYVLQDVEEEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRICGDCHSTAK 598
           Y   T  VL  VE +VKE +++ HSEKLA++FGLL +  G  + + KNLR+C DCH+  K
Sbjct: 719 YVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATK 778

Query: 599 LISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 628
            ISL+  R I++RD +RFHHF +G CSC DYW
Sbjct: 779 YISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

BLAST of Lsi08G012840 vs. Swiss-Prot
Match: PP364_ARATH (Pentatricopeptide repeat-containing protein At5g04780 OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2)

HSP 1 Score: 453.0 bits (1164), Expect = 5.4e-126
Identity = 220/561 (39.22%), Postives = 353/561 (62.92%), Query Frame = 1

Query: 71  SISNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFDDMPDKDLISWNSLIS 130
           ++   +  H ++I+  L  +  + + L+  Y+K G+V+ A+++FD M ++ L+SWN++I 
Sbjct: 76  AVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIG 135

Query: 131 GFSR--CLDMTLKAFYTMKFEMSVKPNEVTILSMISACNGALDT--GKYVHGFAIKVGVS 190
            ++R       L  F  M+ E   K +E TI S++SAC    D    K +H  ++K  + 
Sbjct: 136 LYTRNRMESEALDIFLEMRNE-GFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCID 195

Query: 191 LEVKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSIIAAQVTNGCAREGLDCFNKM 250
           L + V  +L+++Y K G +  A ++FE++ D ++V+W+S++A  V N    E L  + + 
Sbjct: 196 LNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRA 255

Query: 251 RRFGIEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLGAKITIATALLDLYAKLGRL 310
           +R  +E ++ T+ +++ AC +       + +H +I  SG G+ + +A++ +D+YAK G L
Sbjct: 256 QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSL 315

Query: 311 SASYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESMAKKGLEPDHVTFTHLLSAC 370
             SY IF EV   +   W  +++G+A H   +E + LFE M + G+ P+ VTF+ LLS C
Sbjct: 316 RESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC 375

Query: 371 SHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIRNMPMEPNAGV 430
            H+GLV EG+ +F +M   YG+ P + HYSCMVD+LGR GLL++AYE+I+++P +P A +
Sbjct: 376 GHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASI 435

Query: 431 WGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKE 490
           WG+LL +CRVY N+EL +  AE L  LEP +  N+++LSN+Y+A++ W++ AK R LL++
Sbjct: 436 WGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRD 495

Query: 491 RGLKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEELLGKMRQAGYSSKTEYVLQD 550
             +K+  G S I+  +K+H F VG+  HP   +I + L+ L+ K R+ GY    E+ L D
Sbjct: 496 CDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHD 555

Query: 551 VEEEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRICGDCHSTAKLISLIEKRTII 610
           VE   KE+++ +HSEKLAL FGL+   E +P+ I KNLRIC DCH   K  S+  +R II
Sbjct: 556 VEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFII 615

Query: 611 IRDPKRFHHFSDGFCSCADYW 628
           +RD  RFHHFSDG CSC D+W
Sbjct: 616 VRDVNRFHHFSDGHCSCGDFW 635

BLAST of Lsi08G012840 vs. TrEMBL
Match: A0A0A0LKE6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348160 PE=4 SV=1)

HSP 1 Score: 1138.6 bits (2944), Expect = 0.0e+00
Identity = 562/628 (89.49%), Postives = 589/628 (93.79%), Query Frame = 1

Query: 1   MVFLSRCCSLFLFPTGISVRLHRDSSILYNFFIQSRTQYPLLL-RSYHLIRQCPTAEALV 60
           MVF S C SLFLFPT IS+ L  +SSILYNFFIQSRTQYPLLL RS+HL+RQC T EA+V
Sbjct: 1   MVFSSPCYSLFLFPTIISMPLRWNSSILYNFFIQSRTQYPLLLHRSFHLVRQCATPEAIV 60

Query: 61  SALLIAVNSCTSISNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFDDMPD 120
           SALLIAVNSC SISNCREIH RV KSLLYR+GFIGDQLVTCYNKLGY +DA KLFDDMP 
Sbjct: 61  SALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPH 120

Query: 121 KDLISWNSLISGFSRCLDMTLKAFYTMKFEMSVKPNEVTILSMISACNGALDTGKYVHGF 180
           KDL+SWNSLISGFSRCL M+L AFYTMKFEMSVKPNEVTILSMISAC+GALD GKY+HGF
Sbjct: 121 KDLVSWNSLISGFSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACSGALDAGKYIHGF 180

Query: 181 AIKVGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSIIAAQVTNGCAREG 240
            IKVG +LEVKV NSLINMYGKSGDLTSACRLFEAI DPNTVSWNSIIAAQVTNGCAREG
Sbjct: 181 GIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREG 240

Query: 241 LDCFNKMRRFGIEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLGAKITIATALLDL 300
           +D FNKMRR GIE DEGTILALLQAC+H GVGKLAESIHGL+FC+G GAKITIATALLD 
Sbjct: 241 IDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDT 300

Query: 301 YAKLGRLSASYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESMAKKGLEPDHVTF 360
           YAKLGRLSASY +F EVG ADRVAWTAMLAGYAAHGLGREAIKLFESMA KGLEPDHVTF
Sbjct: 301 YAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTF 360

Query: 361 THLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIRNMP 420
           THLLSACSHSGLV EGKSYFN+MSEVYGIEPR+DHYSCMVDLLGRCGLLNDAYEVI+NMP
Sbjct: 361 THLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMP 420

Query: 421 MEPNAGVWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYSASRSWKDAAK 480
           MEPNAGVWGALLGACRV+GNIELGKEVAEHLI++EPLDPRNYIMLSNMYSASRSWKDAAK
Sbjct: 421 MEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAK 480

Query: 481 VRALLKERGLKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEELLGKMRQAGYSSK 540
           VRALLKERGLKRTPG SSIEYGNK H FFVGDRSHPETEKIY+KLEELLGK+R+AGYSSK
Sbjct: 481 VRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSK 540

Query: 541 TEYVLQDVEEEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRICGDCHSTAKLISL 600
           TEYVLQDVEEEVKEDMINKHSEKLA+AFGLLVSKEG  LIITKNLRICGDCHSTAKLISL
Sbjct: 541 TEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISL 600

Query: 601 IEKRTIIIRDPKRFHHFSDGFCSCADYW 628
           IEKRTIIIRDPKRFHHFSDGFCSCADYW
Sbjct: 601 IEKRTIIIRDPKRFHHFSDGFCSCADYW 628

BLAST of Lsi08G012840 vs. TrEMBL
Match: M5VWG5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021080mg PE=4 SV=1)

HSP 1 Score: 815.1 bits (2104), Expect = 6.0e-233
Identity = 393/564 (69.68%), Postives = 467/564 (82.80%), Query Frame = 1

Query: 68  SCTSISNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFDDMPDKDLISWNS 127
           SC+SIS  R IH+ VIKS  Y +GFIGDQLV+CY +LG  DDA+ LFD+MP+KDLISWNS
Sbjct: 1   SCSSISYSRAIHSCVIKSFNYTDGFIGDQLVSCYTRLGRADDARNLFDEMPNKDLISWNS 60

Query: 128 LISGFSR--CLDMTLKAFYTMKFEMSVKPNEVTILSMISAC--NGALDTGKYVHGFAIKV 187
           LISGFSR   +D  L AF+ MKFEM ++P+EVT++S+ SAC   GA+D GKY+HGFA+K+
Sbjct: 61  LISGFSRRGYVDKCLDAFFRMKFEMGIEPDEVTLISITSACASRGAVDEGKYIHGFALKL 120

Query: 188 GVSLEVKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSIIAAQVTNGCAREGLDCF 247
           GV  EVK+VNSLIN+YGKSG L + CRL E +   N VSWN +I +   NG A +G+  F
Sbjct: 121 GVLWEVKLVNSLINLYGKSGYLDAVCRLVETMPVGNIVSWNLMIVSHAQNGSAADGVGYF 180

Query: 248 NKMRRFGIEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLGAKITIATALLDLYAKL 307
           N MRR GI PD+GT+L+LL+AC + G+ KLAE +HGLI   GL A  T+AT LLDLYAKL
Sbjct: 181 NLMRRAGINPDDGTVLSLLEACENLGLQKLAEGVHGLITKCGLYANATVATGLLDLYAKL 240

Query: 308 GRLSASYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESMAKKGLEPDHVTFTHLL 367
           GRL+ S  +F EV   D+VAWTAMLAG A HG GREA++LFE M K G+EPDHVTFTHLL
Sbjct: 241 GRLNYSLKVFGEVNNPDKVAWTAMLAGNAVHGNGREAMELFEGMVKVGVEPDHVTFTHLL 300

Query: 368 SACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIRNMPMEPN 427
           SACSHSGLV+EGK+YF++MS+VYGIEPR+DHYSCMVDLLGR GLLNDAYE+I+ MP++PN
Sbjct: 301 SACSHSGLVKEGKNYFDIMSQVYGIEPRLDHYSCMVDLLGRSGLLNDAYELIKRMPLKPN 360

Query: 428 AGVWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYSASRSWKDAAKVRAL 487
           + VWGAL GACRVYGNIELGKEVAE L  L+P D RNYIMLSNMYSA+  W+DA+KVRAL
Sbjct: 361 SAVWGALFGACRVYGNIELGKEVAERLFSLDPSDSRNYIMLSNMYSAAGLWRDASKVRAL 420

Query: 488 LKERGLKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEELLGKMRQAGYSSKTEYV 547
           +KE+GL R PGCS IE+GNKIHRF VGDRSHPE+EKIY KLEE++GK+R+AG+ SKTE++
Sbjct: 421 MKEKGLIRNPGCSFIEHGNKIHRFAVGDRSHPESEKIYTKLEEMIGKIREAGFVSKTEFI 480

Query: 548 LQDVEEEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRICGDCHSTAKLISLIEKR 607
           L DVE+ VKEDMI+KHSEKLA+AFGLLV+  G P+IITKNLRICGDCHSTAKLISLIEKR
Sbjct: 481 LHDVEQAVKEDMISKHSEKLAIAFGLLVTNAGMPIIITKNLRICGDCHSTAKLISLIEKR 540

Query: 608 TIIIRDPKRFHHFSDGFCSCADYW 628
           TIIIRD KRFHHF+ G CSC DYW
Sbjct: 541 TIIIRDSKRFHHFAAGICSCGDYW 564

BLAST of Lsi08G012840 vs. TrEMBL
Match: E0CQU6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00640 PE=4 SV=1)

HSP 1 Score: 779.2 bits (2011), Expect = 3.7e-222
Identity = 387/607 (63.76%), Postives = 475/607 (78.25%), Query Frame = 1

Query: 27  ILYNFFIQSRTQYPLLLRSYHLIRQCPTAE--ALVSALLIAVNSCTSISNCREIHTRVIK 86
           +L  FFI  R      + + +L +  P  +  ++V +L+ A++SCTS+S C  IH RVIK
Sbjct: 36  LLCKFFISKRR-----ICNANLFQLSPPFQVYSIVQSLVFAISSCTSVSYCSAIHARVIK 95

Query: 87  SLLYREGFIGDQLVTCYNKLGYVDDAQKLFDDMPDKDLISWNSLISGFSR--CLDMTLKA 146
           SL Y +GFIGD+LV+ Y KLGY +DAQ+LFD+MP+KDL+SWNSL+SG S    L   L A
Sbjct: 96  SLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNA 155

Query: 147 FYTMKFEMSVKPNEVTILSMISACN--GALDTGKYVHGFAIKVGVSLEVKVVNSLINMYG 206
           F  M+ E   +PNEVT+LS++SAC   GALD GK +HG  +K+G+S + KVVNSLINMYG
Sbjct: 156 FCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYG 215

Query: 207 KSGDLTSACRLFEAIADPNTVSWNSIIAAQVTNGCAREGLDCFNKMRRFGIEPDEGTILA 266
           K G L +A +LFE +   + VSWNS++     NG A +G+D FN M+R GI PD+ T++A
Sbjct: 216 KLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVA 275

Query: 267 LLQACVHSGVGKLAESIHGLIFCSGLGAKITIATALLDLYAKLGRLSASYDIFREVGCAD 326
           LL+AC  +G+G+ AESIH  I   G  A I IATALL+LYAKLGRL+AS DIF E+   D
Sbjct: 276 LLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRD 335

Query: 327 RVAWTAMLAGYAAHGLGREAIKLFESMAKKGLEPDHVTFTHLLSACSHSGLVREGKSYFN 386
           R+AWTAMLAGYA H  GREAIKLF+ M K+G+E DHVTFTHLLSACSHSGLV EGK YF 
Sbjct: 336 RIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFE 395

Query: 387 MMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIRNMPMEPNAGVWGALLGACRVYGNI 446
           +MSEVY +EPR+DHYSCMVDLLGR G L DAYE+I++MPMEP++GVWGALLGACRVYGN+
Sbjct: 396 IMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNV 455

Query: 447 ELGKEVAEHLIHLEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGCSSIEY 506
           ELGKEVAE L+ L+P D RNYIMLSN+YSA+  W+DA+KVRAL+KER L R PGCS IE+
Sbjct: 456 ELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRLTRNPGCSFIEH 515

Query: 507 GNKIHRFFVGDRSHPETEKIYAKLEELLGKMRQAGYSSKTEYVLQDVEEEVKEDMINKHS 566
           GNKIHRF VGD+ HP +++I+ KLEEL+ K+R+AG + KTE+VL D++EEVK DMINKHS
Sbjct: 516 GNKIHRFVVGDQLHPRSDEIHTKLEELIRKIREAGCAPKTEFVLHDIDEEVKVDMINKHS 575

Query: 567 EKLALAFGLLVSKEGAPLIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGF 626
           EKLA+AFGLLV+  G PLIITKNLRICGDCHSTAK  SL+EKRTIIIRD KRFHHF+DG 
Sbjct: 576 EKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGL 635

Query: 627 CSCADYW 628
           CSC DYW
Sbjct: 636 CSCRDYW 637

BLAST of Lsi08G012840 vs. TrEMBL
Match: A0A061FDS7_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein, putative OS=Theobroma cacao GN=TCM_034320 PE=4 SV=1)

HSP 1 Score: 774.6 bits (1999), Expect = 9.0e-221
Identity = 385/613 (62.81%), Postives = 468/613 (76.35%), Query Frame = 1

Query: 30  NFFIQSRTQYPLLLRSYHLIRQCPT-----------AEALVSALLIAVNSCTSISNCREI 89
           NF+     + P LL    L    P+           +E+LVSAL++ VNSC+ +S C+  
Sbjct: 14  NFYTNYAQRKPFLLSRKGLSNVIPSRSSLQLHSHLYSESLVSALIVGVNSCSCVSYCQAF 73

Query: 90  HTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFDDMPDKDLISWNSLISGFSRCLDM 149
           H RVIK++ YR GF+GDQLV+ Y +LGY + AQ LFD+MP+KDL+SWNSLISG  R    
Sbjct: 74  HARVIKAVNYRHGFVGDQLVSSYARLGYPEYAQNLFDEMPNKDLVSWNSLISGLCRSGFT 133

Query: 150 T--LKAFYTMKFEMSVKPNEVTILSMISACN--GALDTGKYVHGFAIKVGVSLEVKVVNS 209
           T  L AF  M+FEM ++PN VT LS+ SAC+  GAL  GK +HGFA+K+G+  EVK+VN+
Sbjct: 134 TKCLSAFCKMRFEMDMQPNYVTFLSIFSACSDEGALSEGKCIHGFAMKLGILNEVKIVNA 193

Query: 210 LINMYGKSGDLTSACRLFEAIADPNTVSWNSIIAAQVTNGCAREGLDCFNKMRRFGIEPD 269
           LINMYGKSG L  AC LFEA+   N VSWNSII     NG A E +  F  MRR G+E D
Sbjct: 194 LINMYGKSGYLREACWLFEAMPLQNLVSWNSIITVYTQNGLAEESMGIFIMMRRAGVEFD 253

Query: 270 EGTILALLQACVHSGVGKLAESIHGLIFCSGLGAKITIATALLDLYAKLGRLSASYDIFR 329
           + T+L +LQAC + GV  LA SIHGLI   G+   +TIATALL+LY+KLG L AS  +F 
Sbjct: 254 QATMLTVLQACENLGVRNLAGSIHGLILRFGITVNVTIATALLNLYSKLGCLQASSKVFG 313

Query: 330 EVGCADRVAWTAMLAGYAAHGLGREAIKLFESMAKKGLEPDHVTFTHLLSACSHSGLVRE 389
           E+   D VAWTAMLA YA HG G++AIKLF+ M +KG++PDHVTFTHLLSACSHSGLV E
Sbjct: 314 EIIDLDSVAWTAMLACYAVHGYGKDAIKLFQVMVQKGVQPDHVTFTHLLSACSHSGLVNE 373

Query: 390 GKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIRNMPMEPNAGVWGALLGAC 449
           GK YF +MSEVYG+E ++DHYSCMVDLLGR G LNDAY++IR MPMEP +GVWGALL AC
Sbjct: 374 GKHYFKIMSEVYGVEQKLDHYSCMVDLLGRSGRLNDAYDLIRCMPMEPTSGVWGALLNAC 433

Query: 450 RVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPG 509
           RVYGN ELGKEVAE L  L+PLD RNYIMLSN+YS++  W++A++VRALLKER   RTPG
Sbjct: 434 RVYGNTELGKEVAERLFSLDPLDARNYIMLSNIYSSAGLWREASEVRALLKERSPYRTPG 493

Query: 510 CSSIEYGNKIHRFFVGDRSHPETEKIYAKLEELLGKMRQAGYSSKTEYVLQDVEEEVKED 569
           CS +E+GNKI+RF VGDRSHP+ E+IY KLEEL+GK+R +G+ SKTE+VL DV+EEVKE+
Sbjct: 494 CSFVEHGNKIYRFVVGDRSHPQAERIYNKLEELIGKIRNSGFMSKTEFVLHDVDEEVKEN 553

Query: 570 MINKHSEKLALAFGLLVSKEGAPLIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFH 628
           MIN+HSEKLA+AFGLLV+    PLIITKNLRICGDCHS AK +SLIE+RT+IIRDPKRFH
Sbjct: 554 MINQHSEKLAVAFGLLVTDAAMPLIITKNLRICGDCHSMAKAVSLIERRTLIIRDPKRFH 613

BLAST of Lsi08G012840 vs. TrEMBL
Match: A5AJY4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031840 PE=4 SV=1)

HSP 1 Score: 772.7 bits (1994), Expect = 3.4e-220
Identity = 385/619 (62.20%), Postives = 474/619 (76.58%), Query Frame = 1

Query: 13  FPTGISVRLHRDSSILYNFFIQSRTQYPLLLRSYHLIRQCPTAEALVSALLIAVNSCTSI 72
           FPT    R    +S   +    +RT+  + L   H       A+++V +L+ A++SCTS+
Sbjct: 98  FPTIAPSRFGTLTSFPNSSNDSTRTKVAVFLGKLH--NSSLLADSIVQSLVFAISSCTSV 157

Query: 73  SNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFDDMPDKDLISWNSLISGF 132
           S C  IH RVIKSL Y +GFIGD+LV+ Y KLGY +DAQ+LFD+MP++DL+SWNSL+SG 
Sbjct: 158 SYCSAIHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGL 217

Query: 133 SR--CLDMTLKAFYTMKFEMSVKPNEVTILSMISACN--GALDTGKYVHGFAIKVGVSLE 192
           S    L   L AF  M+ E   +PNEVT+LS++SAC   GALD GK +HG  +K+G+S +
Sbjct: 218 SGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGK 277

Query: 193 VKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSIIAAQVTNGCAREGLDCFNKMRR 252
            KVVNSLINMYGK G L +A +LFE +   + VSWNS++     NG A +G+D FN M+R
Sbjct: 278 AKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKR 337

Query: 253 FGIEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLGAKITIATALLDLYAKLGRLSA 312
            GI PD+ T++ALL+AC  +G+G+ AESIH  I   G  A I IATALL+LYAKLGRL+A
Sbjct: 338 AGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNA 397

Query: 313 SYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESMAKKGLEPDHVTFTHLLSACSH 372
           S DIF E+   D +AWTAMLAGYA H  GREAIKLF+ M K+G+E DHVTFTHLLSACSH
Sbjct: 398 SEDIFEEIKDRDTIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSH 457

Query: 373 SGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIRNMPMEPNAGVWG 432
           SGLV EGK YF +MSEVY +EPR+DHYSCMVDLLGR G L DAYE+I++MPMEP++GVWG
Sbjct: 458 SGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWG 517

Query: 433 ALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERG 492
           ALLGACRVYGN+ELGKEVAE L+ L+P D RNYIMLSN+YSA+  W+ A+KVR L+KER 
Sbjct: 518 ALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERR 577

Query: 493 LKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEELLGKMRQAGYSSKTEYVLQDVE 552
           L R PGCS IE+GNKIHRF VGD+ HP +++I+ KLEEL+ K+ +AG + KTE+VL D++
Sbjct: 578 LTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDID 637

Query: 553 EEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRICGDCHSTAKLISLIEKRTIIIR 612
           EEVK DMINKHSEKLA+AFGLLV+  G PLIITKNLRICGDCHSTAK  SL+EKRTIIIR
Sbjct: 638 EEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIR 697

Query: 613 DPKRFHHFSDGFCSCADYW 628
           D KRFHHF+DG CSC DYW
Sbjct: 698 DSKRFHHFADGLCSCRDYW 714

BLAST of Lsi08G012840 vs. TAIR10
Match: AT5G40410.1 (AT5G40410.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 716.5 bits (1848), Expect = 1.5e-206
Identity = 352/581 (60.59%), Postives = 435/581 (74.87%), Query Frame = 1

Query: 56  EALVSALLIAVNSCTSISNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFD 115
           +A VS+L+ AV SC SI  CR +H +V+KS+ YR GFIGDQLV CY +LG+   A+KLFD
Sbjct: 31  DANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFD 90

Query: 116 DMPDKDLISWNSLISGFS------RCLDMTLKAFYTMKFEMSVKPNEVTILSMISAC--N 175
           +MP++DL+SWNSLISG+S      +C ++  +   +   E+  +PNEVT LSMISAC   
Sbjct: 91  EMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMIS---EVGFRPNEVTFLSMISACVYG 150

Query: 176 GALDTGKYVHGFAIKVGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSII 235
           G+ + G+ +HG  +K GV  EVKVVN+ IN YGK+GDLTS+C+LFE ++  N VSWN++I
Sbjct: 151 GSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI 210

Query: 236 AAQVTNGCAREGLDCFNKMRRFGIEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLG 295
              + NG A +GL  FN  RR G EPD+ T LA+L++C   GV +LA+ IHGLI   G  
Sbjct: 211 VIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFS 270

Query: 296 AKITIATALLDLYAKLGRLSASYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESM 355
               I TALLDLY+KLGRL  S  +F E+   D +AWTAMLA YA HG GR+AIK FE M
Sbjct: 271 GNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELM 330

Query: 356 AKKGLEPDHVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGL 415
              G+ PDHVTFTHLL+ACSHSGLV EGK YF  MS+ Y I+PR+DHYSCMVDLLGR GL
Sbjct: 331 VHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGL 390

Query: 416 LNDAYEVIRNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNM 475
           L DAY +I+ MPMEP++GVWGALLGACRVY + +LG + AE L  LEP D RNY+MLSN+
Sbjct: 391 LQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNI 450

Query: 476 YSASRSWKDAAKVRALLKERGLKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEEL 535
           YSAS  WKDA+++R L+K++GL R  GCS IE+GNKIH+F VGD SHPE+EKI  KL+E+
Sbjct: 451 YSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQKKLKEI 510

Query: 536 LGKMR-QAGYSSKTEYVLQDVEEEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRI 595
             KM+ + GY SKTE+VL DV E+VKE+MIN+HSEK+A+AFGLLV     P+II KNLRI
Sbjct: 511 RKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEPIIIRKNLRI 570

Query: 596 CGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 628
           CGDCH TAK ISLIEKR IIIRD KRFHHF DG CSC+DYW
Sbjct: 571 CGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608

BLAST of Lsi08G012840 vs. TAIR10
Match: AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 483.4 bits (1243), Expect = 2.1e-136
Identity = 231/537 (43.02%), Postives = 350/537 (65.18%), Query Frame = 1

Query: 97  LVTCYNKLGYVDDAQKLFDDMPDKDLISWNSLISGFSRCLDM--TLKAFYTMKFEMSVKP 156
           L+  Y   GY+++AQKLFD++P KD++SWN++ISG++   +    L+ F  M  + +V+P
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM-MKTNVRP 265

Query: 157 NEVTILSMISAC--NGALDTGKYVHGFAIKVGVSLEVKVVNSLINMYGKSGDLTSACRLF 216
           +E T+++++SAC  +G+++ G+ VH +    G    +K+VN+LI++Y K G+L +AC LF
Sbjct: 266 DESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLF 325

Query: 217 EAIADPNTVSWNSIIAAQVTNGCAREGLDCFNKMRRFGIEPDEGTILALLQACVHSGVGK 276
           E +   + +SWN++I         +E L  F +M R G  P++ T+L++L AC H G   
Sbjct: 326 ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAID 385

Query: 277 LAESIHGLIF--CSGLGAKITIATALLDLYAKLGRLSASYDIFREVGCADRVAWTAMLAG 336
           +   IH  I     G+    ++ T+L+D+YAK G + A++ +F  +      +W AM+ G
Sbjct: 386 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFG 445

Query: 337 YAAHGLGREAIKLFESMAKKGLEPDHVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEP 396
           +A HG    +  LF  M K G++PD +TF  LLSACSHSG++  G+  F  M++ Y + P
Sbjct: 446 FAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTP 505

Query: 397 RIDHYSCMVDLLGRCGLLNDAYEVIRNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHL 456
           +++HY CM+DLLG  GL  +A E+I  M MEP+  +W +LL AC+++GN+ELG+  AE+L
Sbjct: 506 KLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENL 565

Query: 457 IHLEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKERGLKRTPGCSSIEYGNKIHRFFVG 516
           I +EP +P +Y++LSN+Y+++  W + AK RALL ++G+K+ PGCSSIE  + +H F +G
Sbjct: 566 IKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIG 625

Query: 517 DRSHPETEKIYAKLEELLGKMRQAGYSSKTEYVLQDVEEEVKEDMINKHSEKLALAFGLL 576
           D+ HP   +IY  LEE+   + +AG+   T  VLQ++EEE KE  +  HSEKLA+AFGL+
Sbjct: 626 DKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLI 685

Query: 577 VSKEGAPLIITKNLRICGDCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 628
            +K G  L I KNLR+C +CH   KLIS I KR II RD  RFHHF DG CSC DYW
Sbjct: 686 STKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

BLAST of Lsi08G012840 vs. TAIR10
Match: AT4G33990.1 (AT4G33990.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 457.6 bits (1176), Expect = 1.2e-128
Identity = 229/576 (39.76%), Postives = 356/576 (61.81%), Query Frame = 1

Query: 59  VSALLIAVNSCTSISNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFDDMP 118
           V +LL A       +    IH+  IK  L  E F+ ++L+  Y + G + D QK+FD M 
Sbjct: 250 VVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMY 309

Query: 119 DKDLISWNSLISGFSRCLDMTLKA---FYTMKFEMSVKPNEVTILSMISACN--GALDTG 178
            +DLISWNS+I  +    +  L+A   F  M+    ++P+ +T++S+ S  +  G +   
Sbjct: 310 VRDLISWNSIIKAYE-LNEQPLRAISLFQEMRLSR-IQPDCLTLISLASILSQLGDIRAC 369

Query: 179 KYVHGFAIKVGVSLE-VKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSIIAAQVT 238
           + V GF ++ G  LE + + N+++ MY K G + SA  +F  + + + +SWN+II+    
Sbjct: 370 RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQ 429

Query: 239 NGCAREGLDCFNKMRRFG-IEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLGAKIT 298
           NG A E ++ +N M   G I  ++GT +++L AC  +G  +    +HG +  +GL   + 
Sbjct: 430 NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVF 489

Query: 299 IATALLDLYAKLGRLSASYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESMAKKG 358
           + T+L D+Y K GRL  +  +F ++   + V W  ++A +  HG G +A+ LF+ M  +G
Sbjct: 490 VVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEG 549

Query: 359 LEPDHVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDA 418
           ++PDH+TF  LLSACSHSGLV EG+  F MM   YGI P + HY CMVD+ GR G L  A
Sbjct: 550 VKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETA 609

Query: 419 YEVIRNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYSAS 478
            + I++M ++P+A +WGALL ACRV+GN++LGK  +EHL  +EP     +++LSNMY+++
Sbjct: 610 LKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASA 669

Query: 479 RSWKDAAKVRALLKERGLKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEELLGKM 538
             W+   ++R++   +GL++TPG SS+E  NK+  F+ G+++HP  E++Y +L  L  K+
Sbjct: 670 GKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKL 729

Query: 539 RQAGYSSKTEYVLQDVEEEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRICGDCH 598
           +  GY     +VLQDVE++ KE ++  HSE+LA+AF L+ +     + I KNLR+CGDCH
Sbjct: 730 KMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCH 789

Query: 599 STAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 628
           S  K IS I +R II+RD  RFHHF +G CSC DYW
Sbjct: 790 SVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823

BLAST of Lsi08G012840 vs. TAIR10
Match: AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 456.1 bits (1172), Expect = 3.6e-128
Identity = 225/572 (39.34%), Postives = 354/572 (61.89%), Query Frame = 1

Query: 59  VSALLIAVNSCTSISNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFDDMP 118
           + ++L AV++   IS  +EIH   ++S       I   LV  Y K G ++ A++LFD M 
Sbjct: 239 IVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGML 298

Query: 119 DKDLISWNSLISGFSRCLD-MTLKAFYTMKFEMSVKPNEVTILSMISACN--GALDTGKY 178
           +++++SWNS+I  + +  +       +    +  VKP +V+++  + AC   G L+ G++
Sbjct: 299 ERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRF 358

Query: 179 VHGFAIKVGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSIIAAQVTNGC 238
           +H  ++++G+   V VVNSLI+MY K  ++ +A  +F  +     VSWN++I     NG 
Sbjct: 359 IHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGR 418

Query: 239 AREGLDCFNKMRRFGIEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLGAKITIATA 298
             + L+ F++MR   ++PD  T ++++ A     +   A+ IHG++  S L   + + TA
Sbjct: 419 PIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTA 478

Query: 299 LLDLYAKLGRLSASYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESMAKKGLEPD 358
           L+D+YAK G +  +  IF  +       W AM+ GY  HG G+ A++LFE M K  ++P+
Sbjct: 479 LVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPN 538

Query: 359 HVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVI 418
            VTF  ++SACSHSGLV  G   F MM E Y IE  +DHY  MVDLLGR G LN+A++ I
Sbjct: 539 GVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFI 598

Query: 419 RNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYSASRSWK 478
             MP++P   V+GA+LGAC+++ N+   ++ AE L  L P D   +++L+N+Y A+  W+
Sbjct: 599 MQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWE 658

Query: 479 DAAKVRALLKERGLKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEELLGKMRQAG 538
              +VR  +  +GL++TPGCS +E  N++H FF G  +HP+++KIYA LE+L+  +++AG
Sbjct: 659 KVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAG 718

Query: 539 YSSKTEYVLQDVEEEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRICGDCHSTAK 598
           Y   T  VL  VE +VKE +++ HSEKLA++FGLL +  G  + + KNLR+C DCH+  K
Sbjct: 719 YVPDTNLVL-GVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATK 778

Query: 599 LISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 628
            ISL+  R I++RD +RFHHF +G CSC DYW
Sbjct: 779 YISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

BLAST of Lsi08G012840 vs. TAIR10
Match: AT5G04780.1 (AT5G04780.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 453.0 bits (1164), Expect = 3.0e-127
Identity = 220/561 (39.22%), Postives = 353/561 (62.92%), Query Frame = 1

Query: 71  SISNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFDDMPDKDLISWNSLIS 130
           ++   +  H ++I+  L  +  + + L+  Y+K G+V+ A+++FD M ++ L+SWN++I 
Sbjct: 76  AVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIG 135

Query: 131 GFSR--CLDMTLKAFYTMKFEMSVKPNEVTILSMISACNGALDT--GKYVHGFAIKVGVS 190
            ++R       L  F  M+ E   K +E TI S++SAC    D    K +H  ++K  + 
Sbjct: 136 LYTRNRMESEALDIFLEMRNE-GFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCID 195

Query: 191 LEVKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSIIAAQVTNGCAREGLDCFNKM 250
           L + V  +L+++Y K G +  A ++FE++ D ++V+W+S++A  V N    E L  + + 
Sbjct: 196 LNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRA 255

Query: 251 RRFGIEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLGAKITIATALLDLYAKLGRL 310
           +R  +E ++ T+ +++ AC +       + +H +I  SG G+ + +A++ +D+YAK G L
Sbjct: 256 QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSL 315

Query: 311 SASYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESMAKKGLEPDHVTFTHLLSAC 370
             SY IF EV   +   W  +++G+A H   +E + LFE M + G+ P+ VTF+ LLS C
Sbjct: 316 RESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVC 375

Query: 371 SHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIRNMPMEPNAGV 430
            H+GLV EG+ +F +M   YG+ P + HYSCMVD+LGR GLL++AYE+I+++P +P A +
Sbjct: 376 GHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASI 435

Query: 431 WGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYSASRSWKDAAKVRALLKE 490
           WG+LL +CRVY N+EL +  AE L  LEP +  N+++LSN+Y+A++ W++ AK R LL++
Sbjct: 436 WGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRD 495

Query: 491 RGLKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEELLGKMRQAGYSSKTEYVLQD 550
             +K+  G S I+  +K+H F VG+  HP   +I + L+ L+ K R+ GY    E+ L D
Sbjct: 496 CDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHD 555

Query: 551 VEEEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRICGDCHSTAKLISLIEKRTII 610
           VE   KE+++ +HSEKLAL FGL+   E +P+ I KNLRIC DCH   K  S+  +R II
Sbjct: 556 VEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFII 615

Query: 611 IRDPKRFHHFSDGFCSCADYW 628
           +RD  RFHHFSDG CSC D+W
Sbjct: 616 VRDVNRFHHFSDGHCSCGDFW 635

BLAST of Lsi08G012840 vs. NCBI nr
Match: gi|659089064|ref|XP_008445309.1| (PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g40410, mitochondrial [Cucumis melo])

HSP 1 Score: 1147.5 bits (2967), Expect = 0.0e+00
Identity = 563/629 (89.51%), Postives = 590/629 (93.80%), Query Frame = 1

Query: 1   MVFLSRCCSLFLFPTGISVRLHRDSSILYNFFIQSRTQYPLLL--RSYHLIRQCPTAEAL 60
           MVF S CCSLFLFPT IS+ L RDSSILYNFFIQSRTQYPLLL  RS+HLIR C  +EAL
Sbjct: 1   MVFSSPCCSLFLFPTKISIPLRRDSSILYNFFIQSRTQYPLLLLLRSFHLIRPCAASEAL 60

Query: 61  VSALLIAVNSCTSISNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFDDMP 120
           VS LLIAV SCTSISNCREIH RV KSLLYR+GFIGDQLVTCYNKLGY +DAQKLFDDMP
Sbjct: 61  VSDLLIAVKSCTSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDAQKLFDDMP 120

Query: 121 DKDLISWNSLISGFSRCLDMTLKAFYTMKFEMSVKPNEVTILSMISACNGALDTGKYVHG 180
            KDL+SWNSLISGFSRCL MTL AFYTMKFEMS+KPNEVTILSMISACNGALD GKY+HG
Sbjct: 121 HKDLVSWNSLISGFSRCLHMTLTAFYTMKFEMSIKPNEVTILSMISACNGALDAGKYIHG 180

Query: 181 FAIKVGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSIIAAQVTNGCARE 240
           FAIKVG +LEVKV NSLINMYGKSGDLTSACRLFEAI DPNTVSWNSIIAAQVTNGCARE
Sbjct: 181 FAIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCARE 240

Query: 241 GLDCFNKMRRFGIEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLGAKITIATALLD 300
           G+D    MRRFGIE DEGTILALLQAC+H GVGKLAESIH L+FC+G GAKITIATALLD
Sbjct: 241 GIDFLIXMRRFGIEQDEGTILALLQACLHLGVGKLAESIHALMFCTGFGAKITIATALLD 300

Query: 301 LYAKLGRLSASYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESMAKKGLEPDHVT 360
            YAKLGRLSAS D+FREVG ADRVAWTAMLAGYAAHGLGREAIKLFESM  +GLEPDHVT
Sbjct: 301 TYAKLGRLSASCDVFREVGFADRVAWTAMLAGYAAHGLGREAIKLFESMVNEGLEPDHVT 360

Query: 361 FTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIRNM 420
           FTHLLSACSHSGLV EGKSYFN+MSEVYGIEPR+DHYSCMVDLLGRCGLLNDAYEVIRNM
Sbjct: 361 FTHLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIRNM 420

Query: 421 PMEPNAGVWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYSASRSWKDAA 480
           PMEPNAGVWGALLGACRV+GN+ELGKEVAEHLI+LEPLDPRNYIMLSN+YSASRSWKDAA
Sbjct: 421 PMEPNAGVWGALLGACRVHGNVELGKEVAEHLINLEPLDPRNYIMLSNIYSASRSWKDAA 480

Query: 481 KVRALLKERGLKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEELLGKMRQAGYSS 540
           K+RALLKERGLKRTPGCSSIEYGNK H FFVGDRSHPETEKIY+KLEELLGK+++AGYSS
Sbjct: 481 KMRALLKERGLKRTPGCSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIKKAGYSS 540

Query: 541 KTEYVLQDVEEEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRICGDCHSTAKLIS 600
           KTEYVLQDVEEEVKEDMINKHSEKLA+AFGLLVSKEG PLIITKNLRICGDCHSTAKLIS
Sbjct: 541 KTEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEPLIITKNLRICGDCHSTAKLIS 600

Query: 601 LIEKRTIIIRDPKRFHHFSDGFCSCADYW 628
           LIEKRTIIIRDPKRFHHFSDGFCSCADYW
Sbjct: 601 LIEKRTIIIRDPKRFHHFSDGFCSCADYW 629

BLAST of Lsi08G012840 vs. NCBI nr
Match: gi|778670418|ref|XP_004143073.2| (PREDICTED: pentatricopeptide repeat-containing protein At5g40410, mitochondrial [Cucumis sativus])

HSP 1 Score: 1138.6 bits (2944), Expect = 0.0e+00
Identity = 562/628 (89.49%), Postives = 589/628 (93.79%), Query Frame = 1

Query: 1   MVFLSRCCSLFLFPTGISVRLHRDSSILYNFFIQSRTQYPLLL-RSYHLIRQCPTAEALV 60
           MVF S C SLFLFPT IS+ L  +SSILYNFFIQSRTQYPLLL RS+HL+RQC T EA+V
Sbjct: 1   MVFSSPCYSLFLFPTIISMPLRWNSSILYNFFIQSRTQYPLLLHRSFHLVRQCATPEAIV 60

Query: 61  SALLIAVNSCTSISNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFDDMPD 120
           SALLIAVNSC SISNCREIH RV KSLLYR+GFIGDQLVTCYNKLGY +DA KLFDDMP 
Sbjct: 61  SALLIAVNSCPSISNCREIHARVFKSLLYRDGFIGDQLVTCYNKLGYAEDALKLFDDMPH 120

Query: 121 KDLISWNSLISGFSRCLDMTLKAFYTMKFEMSVKPNEVTILSMISACNGALDTGKYVHGF 180
           KDL+SWNSLISGFSRCL M+L AFYTMKFEMSVKPNEVTILSMISAC+GALD GKY+HGF
Sbjct: 121 KDLVSWNSLISGFSRCLHMSLTAFYTMKFEMSVKPNEVTILSMISACSGALDAGKYIHGF 180

Query: 181 AIKVGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSIIAAQVTNGCAREG 240
            IKVG +LEVKV NSLINMYGKSGDLTSACRLFEAI DPNTVSWNSIIAAQVTNGCAREG
Sbjct: 181 GIKVGGTLEVKVANSLINMYGKSGDLTSACRLFEAIPDPNTVSWNSIIAAQVTNGCAREG 240

Query: 241 LDCFNKMRRFGIEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLGAKITIATALLDL 300
           +D FNKMRR GIE DEGTILALLQAC+H GVGKLAESIHGL+FC+G GAKITIATALLD 
Sbjct: 241 IDYFNKMRRLGIEQDEGTILALLQACLHLGVGKLAESIHGLMFCTGFGAKITIATALLDT 300

Query: 301 YAKLGRLSASYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESMAKKGLEPDHVTF 360
           YAKLGRLSASY +F EVG ADRVAWTAMLAGYAAHGLGREAIKLFESMA KGLEPDHVTF
Sbjct: 301 YAKLGRLSASYGVFTEVGFADRVAWTAMLAGYAAHGLGREAIKLFESMANKGLEPDHVTF 360

Query: 361 THLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIRNMP 420
           THLLSACSHSGLV EGKSYFN+MSEVYGIEPR+DHYSCMVDLLGRCGLLNDAYEVI+NMP
Sbjct: 361 THLLSACSHSGLVNEGKSYFNVMSEVYGIEPRVDHYSCMVDLLGRCGLLNDAYEVIQNMP 420

Query: 421 MEPNAGVWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYSASRSWKDAAK 480
           MEPNAGVWGALLGACRV+GNIELGKEVAEHLI++EPLDPRNYIMLSNMYSASRSWKDAAK
Sbjct: 421 MEPNAGVWGALLGACRVHGNIELGKEVAEHLINMEPLDPRNYIMLSNMYSASRSWKDAAK 480

Query: 481 VRALLKERGLKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEELLGKMRQAGYSSK 540
           VRALLKERGLKRTPG SSIEYGNK H FFVGDRSHPETEKIY+KLEELLGK+R+AGYSSK
Sbjct: 481 VRALLKERGLKRTPGYSSIEYGNKNHHFFVGDRSHPETEKIYSKLEELLGKIRKAGYSSK 540

Query: 541 TEYVLQDVEEEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRICGDCHSTAKLISL 600
           TEYVLQDVEEEVKEDMINKHSEKLA+AFGLLVSKEG  LIITKNLRICGDCHSTAKLISL
Sbjct: 541 TEYVLQDVEEEVKEDMINKHSEKLAIAFGLLVSKEGEALIITKNLRICGDCHSTAKLISL 600

Query: 601 IEKRTIIIRDPKRFHHFSDGFCSCADYW 628
           IEKRTIIIRDPKRFHHFSDGFCSCADYW
Sbjct: 601 IEKRTIIIRDPKRFHHFSDGFCSCADYW 628

BLAST of Lsi08G012840 vs. NCBI nr
Match: gi|645264589|ref|XP_008237749.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g40410, mitochondrial [Prunus mume])

HSP 1 Score: 830.1 bits (2143), Expect = 2.6e-237
Identity = 400/579 (69.08%), Postives = 477/579 (82.38%), Query Frame = 1

Query: 53  PTAEALVSALLIAVNSCTSISNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQK 112
           P  + L+S L+  V SC+SIS CR IH+ VIKS  Y +GFIGDQLV+CY +LG  DDA+ 
Sbjct: 66  PNPDILLSYLISDVGSCSSISYCRAIHSCVIKSFNYTDGFIGDQLVSCYTRLGRADDARN 125

Query: 113 LFDDMPDKDLISWNSLISGFSR--CLDMTLKAFYTMKFEMSVKPNEVTILSMISAC--NG 172
           LFD+MP+KDL+SWNSLISGFSR   +D  L AF+ MKFEM ++PNEVT++S+ SAC   G
Sbjct: 126 LFDEMPNKDLVSWNSLISGFSRRGYVDKCLDAFFRMKFEMGIEPNEVTLISITSACASRG 185

Query: 173 ALDTGKYVHGFAIKVGVSLEVKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSIIA 232
           A+D GKY HGFA+K+G+  EVK+VNSLIN+YGKSG L + CRL E +   N VSWN +IA
Sbjct: 186 AIDEGKYTHGFALKLGMLWEVKLVNSLINLYGKSGYLDAVCRLVETMPVGNIVSWNLMIA 245

Query: 233 AQVTNGCAREGLDCFNKMRRFGIEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLGA 292
           +   NG A +G+  FN MRR GI PD+GT+L+LL+AC + G+ KLAE +HGLI   GL A
Sbjct: 246 SHAQNGTAADGVGYFNLMRRAGINPDDGTVLSLLEACENLGLQKLAEGVHGLITKCGLYA 305

Query: 293 KITIATALLDLYAKLGRLSASYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESMA 352
             T+AT LLDLYAKLGRL+ S  +F EV   D+VAWTAMLAGYA HG GREA++LFE M 
Sbjct: 306 NATVATGLLDLYAKLGRLNYSLKVFGEVNNPDKVAWTAMLAGYAVHGNGREAMELFEGMV 365

Query: 353 KKGLEPDHVTFTHLLSACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLL 412
           K G+EPDHVTFTHLLSACSHSGLV+EGK+YF++MS+VYGIEPR+DHYSCMVDLLGR GLL
Sbjct: 366 KVGVEPDHVTFTHLLSACSHSGLVKEGKNYFDIMSQVYGIEPRLDHYSCMVDLLGRTGLL 425

Query: 413 NDAYEVIRNMPMEPNAGVWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMY 472
           NDAYE+I+ MP++PN+ VWGAL GACRVYGNIELGKEVAE L  L+P D RNYIMLSNMY
Sbjct: 426 NDAYELIKRMPLKPNSAVWGALFGACRVYGNIELGKEVAERLFSLDPSDSRNYIMLSNMY 485

Query: 473 SASRSWKDAAKVRALLKERGLKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEELL 532
           SA+  W+DA+KVRAL+KE+GL R PGCS IE+GNKIHRF VGDRSHPE+EKIY KLEE++
Sbjct: 486 SAAGLWRDASKVRALMKEKGLIRNPGCSFIEHGNKIHRFAVGDRSHPESEKIYTKLEEVI 545

Query: 533 GKMRQAGYSSKTEYVLQDVEEEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRICG 592
           GK+R+AG+ SKTE++L DVE+ VKEDMI+KHSEKLA+AFGLLV+  G P+IITKNLRICG
Sbjct: 546 GKIREAGFVSKTEFILHDVEQAVKEDMISKHSEKLAIAFGLLVTNAGMPIIITKNLRICG 605

Query: 593 DCHSTAKLISLIEKRTIIIRDPKRFHHFSDGFCSCADYW 628
           DCHSTAKLISLIEKRTIIIRD KRFHHF+ G CSC DYW
Sbjct: 606 DCHSTAKLISLIEKRTIIIRDSKRFHHFAAGICSCGDYW 644

BLAST of Lsi08G012840 vs. NCBI nr
Match: gi|595792671|ref|XP_007200084.1| (hypothetical protein PRUPE_ppa021080mg, partial [Prunus persica])

HSP 1 Score: 815.1 bits (2104), Expect = 8.6e-233
Identity = 393/564 (69.68%), Postives = 467/564 (82.80%), Query Frame = 1

Query: 68  SCTSISNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFDDMPDKDLISWNS 127
           SC+SIS  R IH+ VIKS  Y +GFIGDQLV+CY +LG  DDA+ LFD+MP+KDLISWNS
Sbjct: 1   SCSSISYSRAIHSCVIKSFNYTDGFIGDQLVSCYTRLGRADDARNLFDEMPNKDLISWNS 60

Query: 128 LISGFSR--CLDMTLKAFYTMKFEMSVKPNEVTILSMISAC--NGALDTGKYVHGFAIKV 187
           LISGFSR   +D  L AF+ MKFEM ++P+EVT++S+ SAC   GA+D GKY+HGFA+K+
Sbjct: 61  LISGFSRRGYVDKCLDAFFRMKFEMGIEPDEVTLISITSACASRGAVDEGKYIHGFALKL 120

Query: 188 GVSLEVKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSIIAAQVTNGCAREGLDCF 247
           GV  EVK+VNSLIN+YGKSG L + CRL E +   N VSWN +I +   NG A +G+  F
Sbjct: 121 GVLWEVKLVNSLINLYGKSGYLDAVCRLVETMPVGNIVSWNLMIVSHAQNGSAADGVGYF 180

Query: 248 NKMRRFGIEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLGAKITIATALLDLYAKL 307
           N MRR GI PD+GT+L+LL+AC + G+ KLAE +HGLI   GL A  T+AT LLDLYAKL
Sbjct: 181 NLMRRAGINPDDGTVLSLLEACENLGLQKLAEGVHGLITKCGLYANATVATGLLDLYAKL 240

Query: 308 GRLSASYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESMAKKGLEPDHVTFTHLL 367
           GRL+ S  +F EV   D+VAWTAMLAG A HG GREA++LFE M K G+EPDHVTFTHLL
Sbjct: 241 GRLNYSLKVFGEVNNPDKVAWTAMLAGNAVHGNGREAMELFEGMVKVGVEPDHVTFTHLL 300

Query: 368 SACSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIRNMPMEPN 427
           SACSHSGLV+EGK+YF++MS+VYGIEPR+DHYSCMVDLLGR GLLNDAYE+I+ MP++PN
Sbjct: 301 SACSHSGLVKEGKNYFDIMSQVYGIEPRLDHYSCMVDLLGRSGLLNDAYELIKRMPLKPN 360

Query: 428 AGVWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYSASRSWKDAAKVRAL 487
           + VWGAL GACRVYGNIELGKEVAE L  L+P D RNYIMLSNMYSA+  W+DA+KVRAL
Sbjct: 361 SAVWGALFGACRVYGNIELGKEVAERLFSLDPSDSRNYIMLSNMYSAAGLWRDASKVRAL 420

Query: 488 LKERGLKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEELLGKMRQAGYSSKTEYV 547
           +KE+GL R PGCS IE+GNKIHRF VGDRSHPE+EKIY KLEE++GK+R+AG+ SKTE++
Sbjct: 421 MKEKGLIRNPGCSFIEHGNKIHRFAVGDRSHPESEKIYTKLEEMIGKIREAGFVSKTEFI 480

Query: 548 LQDVEEEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRICGDCHSTAKLISLIEKR 607
           L DVE+ VKEDMI+KHSEKLA+AFGLLV+  G P+IITKNLRICGDCHSTAKLISLIEKR
Sbjct: 481 LHDVEQAVKEDMISKHSEKLAIAFGLLVTNAGMPIIITKNLRICGDCHSTAKLISLIEKR 540

Query: 608 TIIIRDPKRFHHFSDGFCSCADYW 628
           TIIIRD KRFHHF+ G CSC DYW
Sbjct: 541 TIIIRDSKRFHHFAAGICSCGDYW 564

BLAST of Lsi08G012840 vs. NCBI nr
Match: gi|764529690|ref|XP_011458216.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g40410, mitochondrial [Fragaria vesca subsp. vesca])

HSP 1 Score: 802.4 bits (2071), Expect = 5.8e-229
Identity = 386/622 (62.06%), Postives = 488/622 (78.46%), Query Frame = 1

Query: 19  VRLHRDSSILYNFFIQSRTQ--------YPLLL-RSYHLIRQCPTAEALVSALLIAVNSC 78
           +RL   SS L NF    RT         Y L   +++H     P  +  +SAL+ A++SC
Sbjct: 2   IRLRSCSSSLLNFPFHFRTHQIQSPQCIYKLFTQKAFHNAHSNP--QTPLSALISAISSC 61

Query: 79  TSISNCREIHTRVIKSLLYREGFIGDQLVTCYNKLGYVDDAQKLFDDMPDKDLISWNSLI 138
            S+S CR IH  VIKS  Y +GFIGDQLV+CY K+G  +DA  LFD+MP +DL+SWNSLI
Sbjct: 62  PSVSYCRAIHACVIKSYSYSDGFIGDQLVSCYAKMGSAEDALNLFDEMPKRDLVSWNSLI 121

Query: 139 SGFSR--CLDMTLKAFYTMKFEMSVKPNEVTILSMISAC--NGALDTGKYVHGFAIKVGV 198
           SGFS    ++  L A + M+FE+ ++PNEVT++S++SAC   GA+D G ++HG A+K+G+
Sbjct: 122 SGFSPRGYVEKCLNALFRMRFEVGIEPNEVTLISVVSACASRGAVDEGMHIHGLALKLGL 181

Query: 199 SLEVKVVNSLINMYGKSGDLTSACRLFEAIADPNTVSWNSIIAAQVTNGCAREGLDCFNK 258
             E K+VNSLIN+YGKSG L + CRL E +   N VSWN +IA    NG A EGL+CFN 
Sbjct: 182 LWEPKLVNSLINLYGKSGYLDAVCRLIETMPMQNVVSWNLMIAIHAQNGSAAEGLNCFNL 241

Query: 259 MRRFGIEPDEGTILALLQACVHSGVGKLAESIHGLIFCSGLGAKITIATALLDLYAKLGR 318
           MRR G+ P +GT+++LLQ C +  +GKLAE +HG+I   GL A + +AT +LDLYAKLGR
Sbjct: 242 MRRAGVYPADGTVVSLLQVCENLELGKLAEGVHGVIIKCGLSANVRVATGVLDLYAKLGR 301

Query: 319 LSASYDIFREVGCADRVAWTAMLAGYAAHGLGREAIKLFESMAKKGLEPDHVTFTHLLSA 378
           L  S ++F+E+   D+VAWTAMLAGYA HG G+EA+++FE+M +KG++PDHVTFTHLLSA
Sbjct: 302 LDYSLEVFKELINPDKVAWTAMLAGYATHGYGQEAVEIFENMVRKGVQPDHVTFTHLLSA 361

Query: 379 CSHSGLVREGKSYFNMMSEVYGIEPRIDHYSCMVDLLGRCGLLNDAYEVIRNMPMEPNAG 438
           CSHSGLV+EG++YFN+MSEVYG+EPR+DHYSCMVDLLGR GLLNDAYE+I+ MPMEPN+G
Sbjct: 362 CSHSGLVKEGRNYFNIMSEVYGVEPRLDHYSCMVDLLGRSGLLNDAYELIKQMPMEPNSG 421

Query: 439 VWGALLGACRVYGNIELGKEVAEHLIHLEPLDPRNYIMLSNMYSASRSWKDAAKVRALLK 498
           VWGA+ GACR+YGNIELGKEVAE L  LEP D RNYIMLSNMYSA+  W+DA++VRA++K
Sbjct: 422 VWGAIFGACRMYGNIELGKEVAERLFALEPSDSRNYIMLSNMYSAAGLWRDASQVRAVMK 481

Query: 499 ERGLKRTPGCSSIEYGNKIHRFFVGDRSHPETEKIYAKLEELLGKMRQAGYSSKTEYVLQ 558
           E+GL RTPGCS IEY N+IHRF VGD+SHPE+ +IYAKLEE++GK+R+AG+ S+TE++L 
Sbjct: 482 EKGLARTPGCSFIEYRNEIHRFVVGDQSHPESVRIYAKLEEVIGKIRKAGFVSQTEFILH 541

Query: 559 DVEEEVKEDMINKHSEKLALAFGLLVSKEGAPLIITKNLRICGDCHSTAKLISLIEKRTI 618
           DVEE VKEDMI++HSEKLA+AFGLLV   G P+IITKNLRICGDCH  AK ISLIEKRTI
Sbjct: 542 DVEEAVKEDMISEHSEKLAIAFGLLVINAGMPIIITKNLRICGDCHGAAKFISLIEKRTI 601

Query: 619 IIRDPKRFHHFSDGFCSCADYW 628
           IIRD KRFHHF++G C+C DYW
Sbjct: 602 IIRDSKRFHHFTNGVCTCGDYW 621

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP411_ARATH2.6e-20560.59Pentatricopeptide repeat-containing protein At5g40410, mitochondrial OS=Arabidop... [more]
PPR21_ARATH3.7e-13543.02Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
PP348_ARATH2.2e-12739.76Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN... [more]
PPR32_ARATH6.4e-12739.34Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
PP364_ARATH5.4e-12639.22Pentatricopeptide repeat-containing protein At5g04780 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0LKE6_CUCSA0.0e+0089.49Uncharacterized protein OS=Cucumis sativus GN=Csa_2G348160 PE=4 SV=1[more]
M5VWG5_PRUPE6.0e-23369.68Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021080mg PE=4 S... [more]
E0CQU6_VITVI3.7e-22263.76Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g00640 PE=4 SV=... [more]
A0A061FDS7_THECC9.0e-22162.81Tetratricopeptide repeat (TPR)-like superfamily protein, putative OS=Theobroma c... [more]
A5AJY4_VITVI3.4e-22062.20Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031840 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G40410.11.5e-20660.59 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G08070.12.1e-13643.02 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G33990.11.2e-12839.76 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G11290.13.6e-12839.34 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G04780.13.0e-12739.22 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659089064|ref|XP_008445309.1|0.0e+0089.51PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g... [more]
gi|778670418|ref|XP_004143073.2|0.0e+0089.49PREDICTED: pentatricopeptide repeat-containing protein At5g40410, mitochondrial ... [more]
gi|645264589|ref|XP_008237749.1|2.6e-23769.08PREDICTED: pentatricopeptide repeat-containing protein At5g40410, mitochondrial ... [more]
gi|595792671|ref|XP_007200084.1|8.6e-23369.68hypothetical protein PRUPE_ppa021080mg, partial [Prunus persica][more]
gi|764529690|ref|XP_011458216.1|5.8e-22962.06PREDICTED: pentatricopeptide repeat-containing protein At5g40410, mitochondrial ... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0016787 hydrolase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G012840.1Lsi08G012840.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 123..137
score: 0.95coord: 394..419
score: 0.07coord: 193..213
score: 0.012coord: 97..121
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 320..367
score: 5.2E-13coord: 218..266
score: 5.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 322..355
score: 1.4E-6coord: 221..255
score: 3.1E-6coord: 357..390
score: 4.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 219..253
score: 10.643coord: 391..421
score: 7.026coord: 355..390
score: 8.079coord: 90..124
score: 7.311coord: 320..354
score: 12.233coord: 188..218
score: 7.015coord: 457..491
score: 7.278coord: 254..288
score: 5.305coord: 289..319
score: 5
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 23..498
score: 1.0E
NoneNo IPR availablePANTHERPTHR24015:SF669SUBFAMILY NOT NAMEDcoord: 23..498
score: 1.0E