Lsi08G012460 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi08G012460
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr08 : 20953408 .. 20954420 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACACCGGTAGAACAAGTTTGTTGCTCTCCACCGAAAGTGGTGGTGACGAAGGCAGCGGTGGCGGTGGCAAACGATGGACAATGGCCGGAGAAGATGGAGACAAATACCGTCGTTCAGAGGTTGAAAGCGAAGGAGGAGAGCCATCGTATGTGGCTATCACCATTGACTTATCTTCCAAGCTTCTTTGTACCTAAATTTCAACACCGTTTCACATTTAATCATATGACATACTACAACAAAATCATTACACGTCCGTTGATGGTAGGACAAAAAAAAGTTTCGAGAAATTATTCAATATGATGGTCGAATTCTATTAAAACTTTGATACATAATTTATAATTCAGCTTAAATTTTTAGGTAAATTAATAATTTAACATAGTATTAATGAGAAGAGGAACATAAAAAAATGCTAAGTGTCATGGGTTCAATCCATGATGGCCATTTACCTAGGATTTAATATGTTACAGGTTGTCCCGCAAGCTAGCCCGAACACTCAAAGATATAAAAAGAAATATCAAAATAGTAAGTCTATCATTTACTCTCCATTTAAACTTTGAATCAATCGTGATTTTACAAATTCCTAATACAATTTAAACTTAGTTTAACACAGTTAAAACAGTTAGGATTGTAATTAATTTAAGCTTTGATTGAAAATTATTGTGAGAAATGATATTTAACCTTCTTTTTGACTGGGCAATCCTGGAGAAGAACACTTGAAATAAGCAGGAGGAGATTGATTATCCTTTGTAATCTTTTGCCCATATTTCCTCCATCTATATCCATCCTTCACAATCTTTAATTCCACCAAAAAAAAAAACACCCCAATGTCATCAAATATTTTCATAAAAAAAAGAAAAAGAAAAAGAGGGAGAGGATTTAATTAATTCTACTATTTTCCATACCAGAGTTTGGTCTTTGAAGATAGTTCTAGCACATGCTTGAGTCGTGGACGAAGTTCCGAGTGCGAGAGCCGGTGGAACTTCGAGATCGGCTCTTGCTCTCGTGTTTGA

mRNA sequence

ATGACACCGGTAGAACAAGTTTGTTGCTCTCCACCGAAAGTGGTGGTGACGAAGGCAGCGGTGGCGGTGGCAAACGATGGACAATGGCCGGAGAAGATGGAGACAAATACCGTCGTTCAGAGGTTGAAAGCGAAGGAGGAGAGCCATCGTATGTGGCTATCACCATTGACTTATCTTCCAAGCTTCTTTGTACCTAAATTTCAACACCGTTTCACATTTAATCATATGACATACTACAACAAAATCATTACACGTCCGTTGATGAGTTTGGTCTTTGAAGATAGTTCTAGCACATGCTTGAGTCGTGGACGAAGTTCCGAGTGCGAGAGCCGGTGGAACTTCGAGATCGGCTCTTGCTCTCGTGTTTGA

Coding sequence (CDS)

ATGACACCGGTAGAACAAGTTTGTTGCTCTCCACCGAAAGTGGTGGTGACGAAGGCAGCGGTGGCGGTGGCAAACGATGGACAATGGCCGGAGAAGATGGAGACAAATACCGTCGTTCAGAGGTTGAAAGCGAAGGAGGAGAGCCATCGTATGTGGCTATCACCATTGACTTATCTTCCAAGCTTCTTTGTACCTAAATTTCAACACCGTTTCACATTTAATCATATGACATACTACAACAAAATCATTACACGTCCGTTGATGAGTTTGGTCTTTGAAGATAGTTCTAGCACATGCTTGAGTCGTGGACGAAGTTCCGAGTGCGAGAGCCGGTGGAACTTCGAGATCGGCTCTTGCTCTCGTGTTTGA

Protein sequence

MTPVEQVCCSPPKVVVTKAAVAVANDGQWPEKMETNTVVQRLKAKEESHRMWLSPLTYLPSFFVPKFQHRFTFNHMTYYNKIITRPLMSLVFEDSSSTCLSRGRSSECESRWNFEIGSCSRV
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G012460.1Lsi08G012460.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi08G012460Bottle gourd (USVL1VR-Ls)lsilsiB151
Lsi08G012460Cucumber (Gy14) v1cgylsiB267
Lsi08G012460Cucumber (Gy14) v1cgylsiB441
Lsi08G012460Cucurbita maxima (Rimu)cmalsiB039
Lsi08G012460Cucurbita maxima (Rimu)cmalsiB184
Lsi08G012460Cucurbita maxima (Rimu)cmalsiB739
Lsi08G012460Cucurbita moschata (Rifu)cmolsiB027
Lsi08G012460Cucurbita moschata (Rifu)cmolsiB175
Lsi08G012460Cucurbita moschata (Rifu)cmolsiB731
Lsi08G012460Cucurbita pepo (Zucchini)cpelsiB100
Lsi08G012460Cucurbita pepo (Zucchini)cpelsiB651
Lsi08G012460Cucurbita pepo (Zucchini)cpelsiB685
Lsi08G012460Wild cucumber (PI 183967)cpilsiB139
Lsi08G012460Wild cucumber (PI 183967)cpilsiB318
Lsi08G012460Cucumber (Chinese Long) v2culsiB140
Lsi08G012460Cucumber (Chinese Long) v2culsiB318
Lsi08G012460Melon (DHL92) v3.5.1lsimeB474
Lsi08G012460Melon (DHL92) v3.5.1lsimeB486
Lsi08G012460Watermelon (Charleston Gray)lsiwcgB434
Lsi08G012460Watermelon (Charleston Gray)lsiwcgB438
Lsi08G012460Watermelon (97103) v1lsiwmB465
Lsi08G012460Watermelon (97103) v1lsiwmB484
Lsi08G012460Cucumber (Gy14) v2cgyblsiB126
Lsi08G012460Cucumber (Gy14) v2cgyblsiB290
Lsi08G012460Melon (DHL92) v3.6.1lsimedB493
Lsi08G012460Melon (DHL92) v3.6.1lsimedB505
Lsi08G012460Silver-seed gourdcarlsiB128
Lsi08G012460Silver-seed gourdcarlsiB580
Lsi08G012460Silver-seed gourdcarlsiB898
Lsi08G012460Cucumber (Chinese Long) v3cuclsiB152
Lsi08G012460Cucumber (Chinese Long) v3cuclsiB338
Lsi08G012460Watermelon (97103) v2lsiwmbB440
Lsi08G012460Watermelon (97103) v2lsiwmbB444
Lsi08G012460Wax gourdlsiwgoB592
Lsi08G012460Wax gourdlsiwgoB622