Lsi08G010750 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi08G010750
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_31
Location	chr08 : 19340830 .. 19342382 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTGCTATAAATTGAGTCGTCCATGGCATCCCATTTCTTCATAAACATATATCCATATGGCTCCCAATAAATTGGAAACAAAAGTGGAAGTGCAAAGGCCATCAATGGAGGGTCTCCAACGAACCATATCCGACATCTGCTCGGAGTTAACGAAAGAAGATCTTGCAGTTGCCGGAAACCTACCCCTGCCGCCCATCACCGAGGTGGAGGCCGCCGCTTGTGAGTGTTGCGGCCTCTCTGAGGAATGCACGGCGGAGTACATCGGTCGTGTTCGTGACAAGTTCATGGGAAAGCTTATTTGTGGCCTCTGCGCCGAGGCCGTAAACGAGGGGATGGAGAAGGTTAAATTTTTTGTATTTTTATTATTTTCTTCGTTTTTTAATTAAATCTAGCTGAAGATTCAAATATTTGACCTTAAACCATTAAACTAAGTTAAAATTTCAAAAATTTTATGTTTATATTCTTATTTTCAGTTCTTATATATATTTTTTTGAATTTCAGATTCTCAATGCTAAATTTCTCCTTTTTTGGGCTAAGAAAATTAGCAGGAAAAAAAAAAATTAAACACATGATTTTTTAGTTAAAAAAAAGAGGTTTTGCTATATATCTATTTGAGCTTCTTAAATTTGCTATCATCTTAAATTATTAGTTATGATATATGAAATTATTTAAGCTTCATCCGGAGTTGATTAGTGTCTAAAACTAATGGTACATTAATTTAAACAAAATAACTTTTATAATTACTTTAGTTGAGCCAATTAGTGCAGGTATAGTTCAATTGAGTTAAAACATTACAACTTTAACAAAAACGTCAAAAGTTTGAGTCCTCATCTAAATATATTTAGATCTAGTTTGATAACCATGTAATCTTTTATTATTATTATTATTATTATTATTATTATTATTATTTAAAATGAAGTATATAAACACTACTTCTATCTACAAGTTTTCTTTTTATTGTTATCTACTTCTTACAAAAAAAAATGATCAAAAATCTAATTTAATTTCTAAAAAGTAAAAATATATAAATATAGTTTTAAAAATGTAAATATTAACATCGATGAAAACTAAAACAAGAACTCTTTTTTTTAACAACAGGAAATTAAAAACAAAATCATTGAATATCAGACAAGGCATAAGGTTTTGTCTAGCTCGATGGTGTGTTTGTATAACCACGACGTGTGTCGTTACAGTAATTTCAAACTAAGCTCGATTGGTATAACTTGTAATAGAAGGGTTGGAAAAGAGAGGAGGCATTGAAGGAACATATGAGCGCTTGTGCAAAGTTCAATAGGATCGGAAGGGCATATCCGGTGTTGTATCAAGCGGAAGCAATTAAACACATTCTCAAGAAAACCTCCACCAAAGGAATTAAGTCCACCGTCGCCGCCACCCACCGCAATGGCAGGATTGGTCGGACCTCCAGTTGCATTCCGGCCATCACTAGAGACGTTTGTGATCCAACCATAGTTAAATGATATAATTATATTTATAACGCCAAAATATAATTATTTTGTCTTTAAAATCTTCTTTTATTGGAATGTGCGTG

mRNA sequence

ATGAGGCCATCAATGGAGGGTCTCCAACGAACCATATCCGACATCTGCTCGGAGTTAACGAAAGAAGATCTTGCAGTTGCCGGAAACCTACCCCTGCCGCCCATCACCGAGGTGGAGGCCGCCGCTTGTGAGTGTTGCGGCCTCTCTGAGGAATGCACGGCGGAGTACATCGGTCGTGTTCGTGACAAGTTCATGGGAAAGCTTATTTGTGGCCTCTGCGCCGAGGCCGTAAACGAGGGGATGGAGAAGGAAATTAAAAACAAAATCATTGAATATCAGACAAGGCATAAGGTTTTGTCTAGCTCGATGGGTTGGAAAAGAGAGGAGGCATTGAAGGAACATATGAGCGCTTGTGCAAAGTTCAATAGGATCGGAAGGGCATATCCGGTGTTGTATCAAGCGGAAGCAATTAAACACATTCTCAAGAAAACCTCCACCAAAGGAATTAAGTCCACCGTCGCCGCCACCCACCGCAATGGCAGGATTGGTCGGACCTCCAGTTGCATTCCGGCCATCACTAGAGACGTTTGTGATCCAACCATAGTTAAATGATATAATTATATTTATAACGCCAAAATATAATTATTTTGTCTTTAAAATCTTCTTTTATTGGAATGTGCGTG

Coding sequence (CDS)

ATGAGGCCATCAATGGAGGGTCTCCAACGAACCATATCCGACATCTGCTCGGAGTTAACGAAAGAAGATCTTGCAGTTGCCGGAAACCTACCCCTGCCGCCCATCACCGAGGTGGAGGCCGCCGCTTGTGAGTGTTGCGGCCTCTCTGAGGAATGCACGGCGGAGTACATCGGTCGTGTTCGTGACAAGTTCATGGGAAAGCTTATTTGTGGCCTCTGCGCCGAGGCCGTAAACGAGGGGATGGAGAAGGAAATTAAAAACAAAATCATTGAATATCAGACAAGGCATAAGGTTTTGTCTAGCTCGATGGGTTGGAAAAGAGAGGAGGCATTGAAGGAACATATGAGCGCTTGTGCAAAGTTCAATAGGATCGGAAGGGCATATCCGGTGTTGTATCAAGCGGAAGCAATTAAACACATTCTCAAGAAAACCTCCACCAAAGGAATTAAGTCCACCGTCGCCGCCACCCACCGCAATGGCAGGATTGGTCGGACCTCCAGTTGCATTCCGGCCATCACTAGAGACGTTTGTGATCCAACCATAGTTAAATGA

Protein sequence

MRPSMEGLQRTISDICSELTKEDLAVAGNLPLPPITEVEAAACECCGLSEECTAEYIGRVRDKFMGKLICGLCAEAVNEGMEKEIKNKIIEYQTRHKVLSSSMGWKREEALKEHMSACAKFNRIGRAYPVLYQAEAIKHILKKTSTKGIKSTVAATHRNGRIGRTSSCIPAITRDVCDPTIVK

Homology

[Close]

BLAST of Lsi08G010750 vs. TrEMBL
Match: A0A0A0LLX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373460 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.1e-61
Identity = 128/180 (71.11%), Postives = 137/180 (76.11%), Query Frame = 1


Query: 5   MEGLQRTISDICSELTKEDLAVAGN-LPLPPITEVEAAACECCGLSEECTAEYIGRVRDK 64
           MEGLQRTISDI  EL+KE L VA N +PLPPI+EVEAAACECCGLSE+CTAEYIG V+DK
Sbjct: 1   MEGLQRTISDISFELSKEGLGVAANNVPLPPISEVEAAACECCGLSEDCTAEYIGHVKDK 60

Query: 65  FMGKLICGLCAEAVNEGMEKEIKNKIIEYQTRHKVLSSSMGWKREEALKEHMSACAKFNR 124
           FMGKLICGLCAEAVNE MEK                    GWKREEALKEHMSACAKFNR
Sbjct: 61  FMGKLICGLCAEAVNEEMEKN-------------------GWKREEALKEHMSACAKFNR 120

Query: 125 IGRAYPVLYQAEAIKHILKKTSTKGIKSTVAATHRNGRIGRTSSCIPAITRDVCDPTIVK 184
           IGR YPVLYQAEAIK ILKKT          + HR GRIGR+SSCIPA+ RDVCDPT+VK
Sbjct: 121 IGRVYPVLYQAEAIKQILKKTK---------SDHRGGRIGRSSSCIPAVGRDVCDPTMVK 152

[Close]

BLAST of Lsi08G010750 vs. TrEMBL
Match: A0A068UIV6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026929001 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.1e-44
Identity = 98/175 (56.00%), Postives = 117/175 (66.86%), Query Frame = 1


Query: 2   RPSMEGLQRTISDICSELTKEDLAVAGNLPLPPITEVEAAACECCGLSEECTAEYIGRVR 61
           R SME L RTISDI  EL+KE  A   +  L PI+EVE AACECCG+SEECT +YI R+R
Sbjct: 24  RLSMENLHRTISDISFELSKEAAAADNDAKLTPISEVEDAACECCGMSEECTPDYIKRMR 83

Query: 62  DKFMGKLICGLCAEAVNEGMEKEIKNKIIEYQTRHKVLSSSMGWKREEALKEHMSACAKF 121
           +KF GKLICGLCAEAV E M K                    G KRE AL EHM+AC +F
Sbjct: 84  EKFSGKLICGLCAEAVTEEMAKN-------------------GGKREAALNEHMNACVRF 143

Query: 122 NRIGRAYPVLYQAEAIKHILKKTSTKGIKSTVAATHRNGRIGRTSSCIPAITRDV 177
           NR+GRAYPVLYQAEA++ ILKK   K +    AA  + G I R+SSCIP+IT+++
Sbjct: 144 NRLGRAYPVLYQAEAMREILKKNRAKSVSPRDAAAPKKGGIARSSSCIPSITKEM 179

[Close]

BLAST of Lsi08G010750 vs. TrEMBL
Match: A0A061GJS7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_037210 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 3.1e-44
Identity = 102/184 (55.43%), Postives = 122/184 (66.30%), Query Frame = 1


Query: 2   RPSMEGLQRTISDICSELTKEDLAVAGNLPLPPITEVEAAACECCGLSEECTAEYIGRVR 61
           R SME LQRTISDI  EL KE +    +  LPPI+EVE A CECCG+SEECTAEYI +VR
Sbjct: 23  RLSMESLQRTISDISFELGKEAI----DATLPPISEVEDAKCECCGMSEECTAEYISKVR 82

Query: 62  DKFMGKLICGLCAEAVNEGMEKEIKNKIIEYQTRHKVLSSSMGWKREEALKEHMSACAKF 121
           DKF GKL+CGLCAEA+NE MEK                    G KREEAL EHMSAC +F
Sbjct: 83  DKFAGKLVCGLCAEAINEEMEKN-------------------GGKREEALNEHMSACVRF 142

Query: 122 NRIGRAYPVLYQAEAIKHILKKTS---TKGIKSTVAATHRNGRIGRTSSCIPAITRDVCD 181
           NR+GR +PVLYQAEA++ ILKK+S    K +        + GRI R+SSC+P I +++ D
Sbjct: 143 NRLGRTHPVLYQAEAMREILKKSSRVRAKSLSPRDKGGPQKGRISRSSSCMPVIAKEIGD 183

Query: 182 PTIV 183
            T V
Sbjct: 203 RTKV 183

[Close]

BLAST of Lsi08G010750 vs. TrEMBL
Match: A0A067GWM9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029877mg PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.4e-43
Identity = 100/183 (54.64%), Postives = 119/183 (65.03%), Query Frame = 1


Query: 2   RPSMEGLQRTISDICSELTKEDLAVAGNLPLPPITEVEAAACECCGLSEECTAEYIGRVR 61
           R S E LQRT SDI  EL KE+    G LP  PI+EVE A CECCG+SEECTAEYI RVR
Sbjct: 24  RLSNETLQRTKSDILFELRKEEFDAKGELP--PISEVEDAKCECCGMSEECTAEYINRVR 83

Query: 62  DKFMGKLICGLCAEAVNEGMEKEIKNKIIEYQTRHKVLSSSMGWKREEALKEHMSACAKF 121
           +KF GK+ICGLC+EAVNE MEK                    G KREEAL EHMSAC +F
Sbjct: 84  EKFSGKMICGLCSEAVNEEMEKN-------------------GGKREEALNEHMSACVRF 143

Query: 122 NRIGRAYPVLYQAEAIKHILKKTSTKGI--KSTVAATHRNGRIGRTSSCIPAITRDVCDP 181
           NR GR +PVL+QAEA++ +LK +  K I  +       + G I R+SSCIPA+TRD+ D 
Sbjct: 144 NRFGRTHPVLFQAEAMREVLKNSRAKSISPRDKKGGNVKRGGIARSSSCIPALTRDINDL 185

Query: 182 TIV 183
            I+
Sbjct: 204 KII 185

[Close]

BLAST of Lsi08G010750 vs. TrEMBL
Match: V4WC08_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009620mg PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.4e-43
Identity = 100/183 (54.64%), Postives = 120/183 (65.57%), Query Frame = 1


Query: 2   RPSMEGLQRTISDICSELTKEDLAVAGNLPLPPITEVEAAACECCGLSEECTAEYIGRVR 61
           R S E LQRT SDI  EL+KE+    G LPL  I+EVE A CECCG+SEECTAEYI RVR
Sbjct: 24  RLSNETLQRTKSDILFELSKEEFDAKGELPL--ISEVEDAKCECCGMSEECTAEYINRVR 83

Query: 62  DKFMGKLICGLCAEAVNEGMEKEIKNKIIEYQTRHKVLSSSMGWKREEALKEHMSACAKF 121
           +KF GK+ICGLC+EAVNE MEK                    G KREEAL EHMSAC +F
Sbjct: 84  EKFSGKMICGLCSEAVNEEMEKN-------------------GGKREEALNEHMSACVRF 143

Query: 122 NRIGRAYPVLYQAEAIKHILKKTSTKGI--KSTVAATHRNGRIGRTSSCIPAITRDVCDP 181
           NR GR +PVL+QAEA++ +LK +  K I  +       + G I R+SSCIPA+TRD+ D 
Sbjct: 144 NRFGRTHPVLFQAEAMREVLKNSRAKSISPRDKKGGNVKRGGIARSSSCIPALTRDINDL 185

Query: 182 TIV 183
            I+
Sbjct: 204 KII 185

[Close]

BLAST of Lsi08G010750 vs. TAIR10
Match: AT5G25840.1 (AT5G25840.1 Protein of unknown function (DUF1677))

HSP 1 Score: 162.2 bits (409), Expect = 3.1e-40
Identity = 94/187 (50.27%), Postives = 120/187 (64.17%), Query Frame = 1


Query: 5   MEGLQRTISDICSE------LTKEDLAVAGN---LPLPPITEVEAAACECCGLSEECTAE 64
           M  LQRTISDI  +      LTKE    A     L L  I+EVE A CECCG+SEECT E
Sbjct: 1   MAPLQRTISDISHQISIDNTLTKEPSPTATATTLLSLSAISEVEDAKCECCGMSEECTPE 60

Query: 65  YIGRVRDKFMGKLICGLCAEAVNEGMEKEIKNKIIEYQTRHKVLSSSMGWKREEALKEHM 124
           YI RVR KF GKLICGLC +AV   MEK   ++++            M  +REEA+K HM
Sbjct: 61  YIHRVRSKFSGKLICGLCEKAVEGEMEKMNNSEVL------------MEKRREEAVKVHM 120

Query: 125 SACAKFNRIGRAYPVLYQAEAIKHILKKTSTKGIKSTVAATHRNGRIGRTSSCIPAITRD 183
           SAC++FNR+GR+YPVLYQAEA+K +LKK S K + +T       G + R+SSC+PA+ ++
Sbjct: 121 SACSRFNRLGRSYPVLYQAEAVKEMLKKRSKKMVGAT---KPEKGGLARSSSCMPALAKE 172

[Close]

BLAST of Lsi08G010750 vs. TAIR10
Match: AT1G79770.1 (AT1G79770.1 Protein of unknown function (DUF1677))

HSP 1 Score: 136.3 bits (342), Expect = 1.8e-32
Identity = 79/171 (46.20%), Postives = 105/171 (61.40%), Query Frame = 1


Query: 6   EGLQRTISDICSELTKEDLAVAGNLPLPPITEVEAAACECCGLSEECTAEYIGRVRDKFM 65
           + L R++SDI  +  +E+    G      I EVE A CECCG+ EECT EYI RVR+KF 
Sbjct: 25  KSLHRSLSDISLDYHREEEKGLGT-----IVEVEKAKCECCGMREECTMEYIERVREKFF 84

Query: 66  GKLICGLCAEAVNEGMEKEIKNKIIEYQTRHKVLSSSMGWKREEALKEHMSACAKFNRIG 125
           GK ICGLC+EAV E  +K  +  +                  E ALKEHMSAC +FN++G
Sbjct: 85  GKWICGLCSEAVKEERDKREEEGL------------------EGALKEHMSACLRFNKLG 144

Query: 126 RAYPVLYQAEAIKHILKKTSTKGIKSTVAATHRNGRIGRTSSCIPAITRDV 177
           R YP L+QA+A++ +L++ ST+G +S +        I RTSSCIPAITRD+
Sbjct: 145 REYPALFQADAMRDMLRR-STRG-QSIIP----KPAISRTSSCIPAITRDL 166

[Close]

BLAST of Lsi08G010750 vs. TAIR10
Match: AT4G14819.1 (AT4G14819.1 Protein of unknown function (DUF1677))

HSP 1 Score: 77.0 bits (188), Expect = 1.3e-14
Identity = 40/109 (36.70%), Postives = 57/109 (52.29%), Query Frame = 1


Query: 37  EVEAAACECCGLSEECTAEYIGRVRDKFMGKLICGLCAEAVNEGMEKEIKNKIIEYQTRH 96
           E+E+  CECCGL E+CT  YI +V+  F GK +CGLC+EAV++   +  K          
Sbjct: 2   EIESVTCECCGLMEDCTQHYISKVKANFAGKWLCGLCSEAVSDEFSRSSKTV-------- 61

Query: 97  KVLSSSMGWKREEALKEHMSACAKFNRIGRAYPVLYQAEAIKHILKKTS 146
                      EEA+  HMS C KFN    A P    A+ ++ +L++ S
Sbjct: 62  -----------EEAVNAHMSFCGKFN----ANPAELVADGMRQMLRRRS 87

[Close]

BLAST of Lsi08G010750 vs. TAIR10
Match: AT2G25780.1 (AT2G25780.1 Protein of unknown function (DUF1677))

HSP 1 Score: 74.3 bits (181), Expect = 8.6e-14
Identity = 47/165 (28.48%), Postives = 73/165 (44.24%), Query Frame = 1


Query: 8   LQRTISDICSELTKEDLAVAGNLPLPPITEVEAAACECCGLSEECTAEYIGRVRDKFMGK 67
           L++  SD+  E  K +++           EV    C+CCG+ EECT +YI +VR+ + G 
Sbjct: 7   LRKAFSDVSLE-RKRNISQNDEQEQEGEVEVNQVKCDCCGIEEECTMQYIAKVRNLYSGN 66

Query: 68  LICGLCAEAVNEGMEKEIKNKIIEYQTRHKVLSSSMGWKREEALKEHMSACAKFNRIGRA 127
            +CGLC E V E + K+                  +    +EA   H   C  FN   R 
Sbjct: 67  WVCGLCGEVVTERLRKD----------------PPIAAGIQEAFDWHKGICDAFNSTTRV 126

Query: 128 YPVLYQAEAIKHILKKTSTKGIKSTVAATHRNGRIGRTSSCIPAI 173
            P L    +++ I K++S   + S  +      +I RT SC P +
Sbjct: 127 NPKLDFTRSMREIAKRSSQNRMMSDFSI---GSKIARTISCDPRL 151

[Close]

BLAST of Lsi08G010750 vs. TAIR10
Match: AT3G22540.1 (AT3G22540.1 Protein of unknown function (DUF1677))

HSP 1 Score: 72.4 bits (176), Expect = 3.3e-13
Identity = 35/109 (32.11%), Postives = 58/109 (53.21%), Query Frame = 1


Query: 37  EVEAAACECCGLSEECTAEYIGRVRDKFMGKLICGLCAEAVNEGMEKEIKNKIIEYQTRH 96
           E+E+  CECCGL E+CT +YI  V+  F  K +CGLC+EAV + + +     +       
Sbjct: 2   EIESVRCECCGLMEDCTQDYISEVKSNFDNKWLCGLCSEAVRDEVSRRKMTTV------- 61

Query: 97  KVLSSSMGWKREEALKEHMSACAKFNRIGRAYPVLYQAEAIKHILKKTS 146
                      +EA+K H+S C KF +     P ++ A+ ++ +L++ S
Sbjct: 62  -----------DEAVKAHVSFCGKFKKDN---PAVHVADGMRQMLRRRS 89

[Close]

BLAST of Lsi08G010750 vs. NCBI nr
Match: gi|659088477|ref|XP_008445002.1| (PREDICTED: uncharacterized protein LOC103488172 [Cucumis melo])

HSP 1 Score: 262.7 bits (670), Expect = 4.8e-67
Identity = 140/182 (76.92%), Postives = 148/182 (81.32%), Query Frame = 1


Query: 4   SMEGLQRTISDICSELTKEDLAVAGN-LPLPPITEVEAAACECCGLSEECTAEYIGRVRD 63
           SMEGLQRTISDI  ELTKE LAVAGN +PLPPI+EVEAAACECCGLSE+CTAEYIGRV+D
Sbjct: 21  SMEGLQRTISDISFELTKEALAVAGNNVPLPPISEVEAAACECCGLSEDCTAEYIGRVKD 80

Query: 64  KFMGKLICGLCAEAVNEGMEKEIKNKIIEYQTRHKVLSSSMGWKREEALKEHMSACAKFN 123
           KFMGKLICGLCAEAVNE MEK+                   GWKREEALKEHMSACAKFN
Sbjct: 81  KFMGKLICGLCAEAVNEEMEKK-------------------GWKREEALKEHMSACAKFN 140

Query: 124 RIGRAYPVLYQAEAIKHILK--KTSTKGIKSTVAATHRNGRIGRTSSCIPAITRDVCDPT 183
           RIGR YPVLYQAEAIK ILK  KTS  GIKS V A HR GRIGRTSSCIPA+TRD+CDPT
Sbjct: 141 RIGRVYPVLYQAEAIKQILKKAKTSNGGIKSAVTA-HRGGRIGRTSSCIPAVTRDICDPT 182

[Close]

BLAST of Lsi08G010750 vs. NCBI nr
Match: gi|778672008|ref|XP_011649728.1| (PREDICTED: uncharacterized protein LOC101204977 [Cucumis sativus])

HSP 1 Score: 243.4 bits (620), Expect = 3.0e-61
Identity = 128/180 (71.11%), Postives = 137/180 (76.11%), Query Frame = 1


Query: 5   MEGLQRTISDICSELTKEDLAVAGN-LPLPPITEVEAAACECCGLSEECTAEYIGRVRDK 64
           MEGLQRTISDI  EL+KE L VA N +PLPPI+EVEAAACECCGLSE+CTAEYIG V+DK
Sbjct: 1   MEGLQRTISDISFELSKEGLGVAANNVPLPPISEVEAAACECCGLSEDCTAEYIGHVKDK 60

Query: 65  FMGKLICGLCAEAVNEGMEKEIKNKIIEYQTRHKVLSSSMGWKREEALKEHMSACAKFNR 124
           FMGKLICGLCAEAVNE MEK                    GWKREEALKEHMSACAKFNR
Sbjct: 61  FMGKLICGLCAEAVNEEMEKN-------------------GWKREEALKEHMSACAKFNR 120

Query: 125 IGRAYPVLYQAEAIKHILKKTSTKGIKSTVAATHRNGRIGRTSSCIPAITRDVCDPTIVK 184
           IGR YPVLYQAEAIK ILKKT          + HR GRIGR+SSCIPA+ RDVCDPT+VK
Sbjct: 121 IGRVYPVLYQAEAIKQILKKTK---------SDHRGGRIGRSSSCIPAVGRDVCDPTMVK 152

[Close]

BLAST of Lsi08G010750 vs. NCBI nr
Match: gi|590573565|ref|XP_007012157.1| (Uncharacterized protein TCM_037210 [Theobroma cacao])

HSP 1 Score: 186.4 bits (472), Expect = 4.4e-44
Identity = 102/184 (55.43%), Postives = 122/184 (66.30%), Query Frame = 1


Query: 2   RPSMEGLQRTISDICSELTKEDLAVAGNLPLPPITEVEAAACECCGLSEECTAEYIGRVR 61
           R SME LQRTISDI  EL KE +    +  LPPI+EVE A CECCG+SEECTAEYI +VR
Sbjct: 23  RLSMESLQRTISDISFELGKEAI----DATLPPISEVEDAKCECCGMSEECTAEYISKVR 82

Query: 62  DKFMGKLICGLCAEAVNEGMEKEIKNKIIEYQTRHKVLSSSMGWKREEALKEHMSACAKF 121
           DKF GKL+CGLCAEA+NE MEK                    G KREEAL EHMSAC +F
Sbjct: 83  DKFAGKLVCGLCAEAINEEMEKN-------------------GGKREEALNEHMSACVRF 142

Query: 122 NRIGRAYPVLYQAEAIKHILKKTS---TKGIKSTVAATHRNGRIGRTSSCIPAITRDVCD 181
           NR+GR +PVLYQAEA++ ILKK+S    K +        + GRI R+SSC+P I +++ D
Sbjct: 143 NRLGRTHPVLYQAEAMREILKKSSRVRAKSLSPRDKGGPQKGRISRSSSCMPVIAKEIGD 183

Query: 182 PTIV 183
            T V
Sbjct: 203 RTKV 183

[Close]

BLAST of Lsi08G010750 vs. NCBI nr
Match: gi|661888060|emb|CDP08177.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 186.4 bits (472), Expect = 4.4e-44
Identity = 98/175 (56.00%), Postives = 117/175 (66.86%), Query Frame = 1


Query: 2   RPSMEGLQRTISDICSELTKEDLAVAGNLPLPPITEVEAAACECCGLSEECTAEYIGRVR 61
           R SME L RTISDI  EL+KE  A   +  L PI+EVE AACECCG+SEECT +YI R+R
Sbjct: 24  RLSMENLHRTISDISFELSKEAAAADNDAKLTPISEVEDAACECCGMSEECTPDYIKRMR 83

Query: 62  DKFMGKLICGLCAEAVNEGMEKEIKNKIIEYQTRHKVLSSSMGWKREEALKEHMSACAKF 121
           +KF GKLICGLCAEAV E M K                    G KRE AL EHM+AC +F
Sbjct: 84  EKFSGKLICGLCAEAVTEEMAKN-------------------GGKREAALNEHMNACVRF 143

Query: 122 NRIGRAYPVLYQAEAIKHILKKTSTKGIKSTVAATHRNGRIGRTSSCIPAITRDV 177
           NR+GRAYPVLYQAEA++ ILKK   K +    AA  + G I R+SSCIP+IT+++
Sbjct: 144 NRLGRAYPVLYQAEAMREILKKNRAKSVSPRDAAAPKKGGIARSSSCIPSITKEM 179

[Close]

BLAST of Lsi08G010750 vs. NCBI nr
Match: gi|568844294|ref|XP_006476024.1| (PREDICTED: uncharacterized protein LOC102629468 [Citrus sinensis])

HSP 1 Score: 183.0 bits (463), Expect = 4.8e-43
Identity = 100/183 (54.64%), Postives = 119/183 (65.03%), Query Frame = 1


Query: 2   RPSMEGLQRTISDICSELTKEDLAVAGNLPLPPITEVEAAACECCGLSEECTAEYIGRVR 61
           R S E LQRT SDI  EL KE+    G LP  PI+EVE A CECCG+SEECTAEYI RVR
Sbjct: 24  RLSNETLQRTKSDILFELRKEEFDAKGELP--PISEVEDAKCECCGMSEECTAEYINRVR 83

Query: 62  DKFMGKLICGLCAEAVNEGMEKEIKNKIIEYQTRHKVLSSSMGWKREEALKEHMSACAKF 121
           +KF GK+ICGLC+EAVNE MEK                    G KREEAL EHMSAC +F
Sbjct: 84  EKFSGKMICGLCSEAVNEEMEKN-------------------GGKREEALNEHMSACVRF 143

Query: 122 NRIGRAYPVLYQAEAIKHILKKTSTKGI--KSTVAATHRNGRIGRTSSCIPAITRDVCDP 181
           NR GR +PVL+QAEA++ +LK +  K I  +       + G I R+SSCIPA+TRD+ D 
Sbjct: 144 NRFGRTHPVLFQAEAMREVLKNSRAKSISPRDKKGGNVKRGGIARSSSCIPALTRDINDL 185

Query: 182 TIV 183
            I+
Sbjct: 204 KII 185

The following BLAST results are available for this feature:

BLAST of Lsi08G010750 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi08G010750 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLX3_CUCSA	2.1e-61	71.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373460 PE=4 SV=1	[more]
A0A068UIV6_COFCA	3.1e-44	56.00	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00026929001 PE=4 SV=1	[more]
A0A061GJS7_THECC	3.1e-44	55.43	Uncharacterized protein OS=Theobroma cacao GN=TCM_037210 PE=4 SV=1	[more]
A0A067GWM9_CITSI	3.4e-43	54.64	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029877mg PE=4 SV=1	[more]
V4WC08_9ROSI	4.4e-43	54.64	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009620mg PE=4 SV=1	[more]

BLAST of Lsi08G010750 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G25840.1	3.1e-40	50.27	Protein of unknown function (DUF1677)	[more]
AT1G79770.1	1.8e-32	46.20	Protein of unknown function (DUF1677)	[more]
AT4G14819.1	1.3e-14	36.70	Protein of unknown function (DUF1677)	[more]
AT2G25780.1	8.6e-14	28.48	Protein of unknown function (DUF1677)	[more]
AT3G22540.1	3.3e-13	32.11	Protein of unknown function (DUF1677)	[more]

BLAST of Lsi08G010750 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659088477\|ref\|XP_008445002.1\|	4.8e-67	76.92	PREDICTED: uncharacterized protein LOC103488172 [Cucumis melo]	[more]
gi\|778672008\|ref\|XP_011649728.1\|	3.0e-61	71.11	PREDICTED: uncharacterized protein LOC101204977 [Cucumis sativus]	[more]
gi\|590573565\|ref\|XP_007012157.1\|	4.4e-44	55.43	Uncharacterized protein TCM_037210 [Theobroma cacao]	[more]
gi\|661888060\|emb\|CDP08177.1\|	4.4e-44	56.00	unnamed protein product [Coffea canephora]	[more]
gi\|568844294\|ref\|XP_006476024.1\|	4.8e-43	54.64	PREDICTED: uncharacterized protein LOC102629468 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012876	DUF1677_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G010750.1	Lsi08G010750.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012876	Protein of unknown function DUF1677, plant	PFAM	PF07911	DUF1677	coord: 38..143 score: 4.6
None	No IPR available	PANTHER	PTHR33108	FAMILY NOT NAMED	coord: 2..84 score: 1.6E-74coord: 104..183 score: 1.6
None	No IPR available	PANTHER	PTHR33108:SF14	SUBFAMILY NOT NAMED	coord: 2..84 score: 1.6E-74coord: 104..183 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi08G010750	Csa2G373460	Cucumber (Chinese Long) v2	culsiB140
Lsi08G010750	CSPI02G22130	Wild cucumber (PI 183967)	cpilsiB139
Lsi08G010750	CmaCh05G005850	Cucurbita maxima (Rimu)	cmalsiB737
Lsi08G010750	CmoCh05G006100	Cucurbita moschata (Rifu)	cmolsiB728
Lsi08G010750	Cla022201	Watermelon (97103) v1	lsiwmB465
Lsi08G010750	MELO3C011131	Melon (DHL92) v3.5.1	lsimeB474
Lsi08G010750	ClCG08G012140	Watermelon (Charleston Gray)	lsiwcgB438
Lsi08G010750	MELO3C011131.2	Melon (DHL92) v3.6.1	lsimedB493
Lsi08G010750	Cla97C08G155290	Watermelon (97103) v2	lsiwmbB444
Lsi08G010750	Bhi04G000710	Wax gourd	lsiwgoB605
Lsi08G010750	Cp4.1LG11g05180	Cucurbita pepo (Zucchini)	cpelsiB098
Lsi08G010750	CsGy2G021860	Cucumber (Gy14) v2	cgyblsiB126
Lsi08G010750	Carg08272	Silver-seed gourd	carlsiB056
Lsi08G010750	CsaV3_2G030760	Cucumber (Chinese Long) v3	cuclsiB152

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi08G010750	Cucumber (Chinese Long) v3	cuclsiB259
Lsi08G010750	Watermelon (97103) v2	lsiwmbB429
Lsi08G010750	Wax gourd	lsiwgoB626
Lsi08G010750	Bottle gourd (USVL1VR-Ls)	lsilsiB147
Lsi08G010750	Cucumber (Gy14) v1	cgylsiB267
Lsi08G010750	Cucumber (Gy14) v1	cgylsiB512
Lsi08G010750	Cucurbita maxima (Rimu)	cmalsiB184
Lsi08G010750	Cucurbita moschata (Rifu)	cmolsiB021
Lsi08G010750	Cucurbita moschata (Rifu)	cmolsiB175
Lsi08G010750	Cucurbita pepo (Zucchini)	cpelsiB685
Lsi08G010750	Wild cucumber (PI 183967)	cpilsiB238
Lsi08G010750	Cucumber (Chinese Long) v2	culsiB239
Lsi08G010750	Watermelon (Charleston Gray)	lsiwcgB423
Lsi08G010750	Melon (DHL92) v3.5.1	lsimeB485
Lsi08G010750	Watermelon (97103) v1	lsiwmB496
Lsi08G010750	Cucumber (Gy14) v2	cgyblsiB225
Lsi08G010750	Melon (DHL92) v3.6.1	lsimedB504
Lsi08G010750	Silver-seed gourd	carlsiB898