Lsi08G008490 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi08G008490
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Ankyrin repeat family protein
Location	chr08 : 16917774 .. 16921156 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACGTATGAACAGTCACAACTTGCAGTATAGTTTTGGCTAGCTATACACTGAACCCTTTCTTGAAACCATTTTGCGACCCGCAGTTTAGGATGCTGTTTTGTTTGCCTGTTTCTTAAGAACTTTCCAGCAAATTAAGACTTTATTCGACAAGTTGACAAAATTATTGTGAAAAAAAAATAAAAAAAAATAAAGAAAAAGGACAAGACAGGCACAAGTGACGAGACTAAACTGAGCAAAATAATTAATAATGTTATCTTCATCCAACTTGACTAATCATTGTAGATTCAAAATGAGTGAACAATATTCAAACTTGGCTCACCTTTCATTCAAAATCATATTCCTAACTCTATCCATACTTTTAAAATCGTTCAACTTTTCTTATTTTTAAAATCACTACAAAAAAAAATATATATACTTTAATCATTCAAACTTAATTTAATTTTGAATTTTATACTTTTAGATATAATTTTCAATCATCAAAATTAATTTTAAAGATTAAAAATATATTTTACGATAATTTTAAAAATGACAAAAGTAATTTTAGTCATTTTAAAATTACTTCAAACATGCTCTTAATTAATTTGGGTAAGTAATTTAAAATGGTAAGTTTTCATTATCTTATCCTTGCAATTTTCCATCATTTACTAGTCAAATTTAATCTTTTTTTAGTATTGTGAGGCAATGAATATTTGAATCTTGGATTTCGAAGAAGAGTAGTACAAGTATTTTCGTAGAGTTTTATGTGCAAGAGTTTTGTAGGCTTTAATTTTACAAACAATCATTTGATTTTATTATGTTAATAGTTTAACGTAAATTATTTTCTTATAGGAAAATATTTGGGTGGAGCCTTCTATTATGCAGCCCAAAGTTGCATCCAATAAAAACGTGTCACGTATTGTTTTATAAAAGAGAGGAAAGCATGCCTTAAGTGTAGATGTCATTAACTCTTACAAGGACTTAAAAAGTATAATATTTCCTACCTTTTTAAATAGTTCTTCATAAGTAACCACTCCCTTGTACAAATGAATAATTTGATAATGTTATAAAACTAGATTATAGCTGGTAGAGTACAGTTATATTCATTTACATAATATATTAATGAGTTAGTTCTTGATGTCAAGCAAAAAAAGAATTTCTCGAACTCAGTGATATAATTGGCACATGCAGTCTTTAATTAAATTCGAAGCTTCAATCCACCATCTTTATAATTATTATAAAGTTTAAAAAAAATTAATTTTAAAAAATTATTAATCCCACCCAAAAAAAGCCTAAAGAAATAAAAGGGGAAGTTTTAAAAACAGAAAAATAAGGTAAACTATTTACACAAAATAGCAAAATTTTTAAATAGTTGTGATAGACGCTGATAGAAGTCTATCAGGATCTATCAGCAATAGAAATGATAGAAGTCTATCAATGTCTATCAGTATTTTTTTTTGCTATTTTCTATAAATAGTTTGACATTTTTTTAATTTATAAAAATTTCCCGAAATAAAAAGGAACAAAAATACCAAAGCATCAGAATTTGAAAAATCAAATAAAAAAAATGCATATAAAATAATGAGATGAAGGGAGAAAATAAGAGTATTGGTAATGTGAGTAAAGTCTAACATGTGCTACATAGCAATTAGATAGTATATCCATGTGTACAAGTCCTATTTTAGTGTGAAACAAAAAATAAAACTACGAGGGATTATGTCTAAAATTTTATTTGTTGAGTATGTTAAAAAAAAAGTAGAAAAATTAATGTAAAATTTTAATTTGTTAAATGGTATATTTCTCTTTAAATTTTTAATTATCACTTTATTTATTAGGGACAAAGTTGCAAATATAGCAATCAAGTTCAAAGTATTAGCAGATGTAACACAATGTAAAAATTTTGCCGATATAACAAAATTTAGATCCAACTTTCAGAGTCTATCAACAATAGAGTTTAACAGCAATAGCAGTCTTCACCAATAGATTATTTGATATATTTGCAATTAAAAAAAGAATAGTTGCAAATATAGCAATCAGATTCAAAGTACCAACATAAATAGCAACATTTTAAAAAAATTGCAAATATAGCAAAATCTAACTATGATAGACTTCTATCGCTGATAGACTTTTATGATTTAGGTGGTTTATCACTGATAGACTATAAGAGTCTATCAGCGACAGGAGTCTATCATTGATAGACTTTGCTATATTTATAATTTTTTTAAAAATGTTGCTATACACTTGATAATTATCCTTAAAATTGCTAATAATTACAATTACCCTTAAAAAAGGGGGACCAATTGTAAAAATCACCTCTAAAGTATGGTGGTAGTTGCAATTAAACTTTTAATTTTAAAAATTCAGCCCTTAAACTTAAATGAGTGTCAAAATTAGGTCAAATTAGATCTTCAAACTTACATAATTGTATAAATAGTAACATTTGTATAAGTTTGATGGTTCAATTTTTATCATTTGTAGGTCTAATTTCTACCATTATTGTAAGTTTGAGAGTCCAATTTTAACTCAAAGTTTAGGTGCCCAATTAAAATATAAAAAATATAAAAATATAAAGAAAGTTTAGGGCTCAATTAAAATTTAAAAAAAAAAAAATATATATATATATATATATATAGTTGCTATACACAATTATTATCCCTGTCTTAGGGAGAGTAGTCTTTTTTGGCTGCTAAGAGGAGATGGTTCCTTCCTGCCATCTTCATTCCTAACCCACTTGATATTTTCTTGAAAACCTGTAAATATAAATAAGTTGGGTTATGATAAGAACTCATTTCAAATTCATTTGAGAGTTCTTGTAGCATTAATGTCAAGACAGAGCAAGGGAGTTGAAGAAACAGCATCACTAGCAATATCAATAGACTCTGTAACTGGAAATCACAGAGAAGCTGAGAATAAGAAGATGGGAAATTGGATGAGAGAAGACACAGATTTTCTAATGGTAGTAACAACATTCCTCGCAACCGTAGCTTTTCAAATTGGGACAAACCCACCCGGCGGCGTTTGGCAAGATGACGATAAACAGGGGAAGTACTTTGCAGGAAAGTCCATAATGGCTACTAAATCCCCTTCTGAATTCAGTGGTTTCTTGGTAACAATTACAGCTTGTTTTGTATTATCAGCCTTGCAATTTGCTGTTCTGTTTCTTAAGAAATGGCCTGCAGAGAAAAGTTGGTCAGTTTCCAGATTCATTCTGTACTCAACTATGGGATTGGCTATTTCTTCCATGGGAATTTCTTATGGCTGCTCTGTAAGAGCTTACACACCTGACTCTGAGGAAACTACGCGAAATGTTATCTCTTTTATTACTATGTTGGGATTCCCTCTTGGTTTGGCTGCCATTTCACTTTACTTACAGTTCCTCAATAAATCTTCATCTTCTTCCTAA

mRNA sequence

ATGCACAACTCATTTCAAATTCATTTGAGAGTTCTTGTAGCATTAATGTCAAGACAGAGCAAGGGAGTTGAAGAAACAGCATCACTAGCAATATCAATAGACTCTGTAACTGGAAATCACAGAGAAGCTGAGAATAAGAAGATGGGAAATTGGATGAGAGAAGACACAGATTTTCTAATGGTAGTAACAACATTCCTCGCAACCGTAGCTTTTCAAATTGGGACAAACCCACCCGGCGGCGTTTGGCAAGATGACGATAAACAGGGGAAGTACTTTGCAGGAAAGTCCATAATGGCTACTAAATCCCCTTCTGAATTCAGTGGTTTCTTGGTAACAATTACAGCTTGTTTTGTATTATCAGCCTTGCAATTTGCTGTTCTGTTTCTTAAGAAATGGCCTGCAGAGAAAAGTTGGTCAGTTTCCAGATTCATTCTGTACTCAACTATGGGATTGGCTATTTCTTCCATGGGAATTTCTTATGGCTGCTCTGTAAGAGCTTACACACCTGACTCTGAGGAAACTACGCGAAATGTTATCTCTTTTATTACTATGTTGGGATTCCCTCTTGGTTTGGCTGCCATTTCACTTTACTTACAGTTCCTCAATAAATCTTCATCTTCTTCCTAA

Coding sequence (CDS)

ATGCACAACTCATTTCAAATTCATTTGAGAGTTCTTGTAGCATTAATGTCAAGACAGAGCAAGGGAGTTGAAGAAACAGCATCACTAGCAATATCAATAGACTCTGTAACTGGAAATCACAGAGAAGCTGAGAATAAGAAGATGGGAAATTGGATGAGAGAAGACACAGATTTTCTAATGGTAGTAACAACATTCCTCGCAACCGTAGCTTTTCAAATTGGGACAAACCCACCCGGCGGCGTTTGGCAAGATGACGATAAACAGGGGAAGTACTTTGCAGGAAAGTCCATAATGGCTACTAAATCCCCTTCTGAATTCAGTGGTTTCTTGGTAACAATTACAGCTTGTTTTGTATTATCAGCCTTGCAATTTGCTGTTCTGTTTCTTAAGAAATGGCCTGCAGAGAAAAGTTGGTCAGTTTCCAGATTCATTCTGTACTCAACTATGGGATTGGCTATTTCTTCCATGGGAATTTCTTATGGCTGCTCTGTAAGAGCTTACACACCTGACTCTGAGGAAACTACGCGAAATGTTATCTCTTTTATTACTATGTTGGGATTCCCTCTTGGTTTGGCTGCCATTTCACTTTACTTACAGTTCCTCAATAAATCTTCATCTTCTTCCTAA

Protein sequence

MHNSFQIHLRVLVALMSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQFLNKSSSSS

Homology

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BLAST of Lsi08G008490 vs. TrEMBL
Match: A0A0A0KGU1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363530 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 9.4e-74
Identity = 147/195 (75.38%), Postives = 164/195 (84.10%), Query Frame = 1


Query: 16  MSRQSKGVEETASLAISIDSVTGNHREAENKKMGN--WMREDTDFLMVVTTFLATVAFQI 75
           MSRQ+    E+ ++ I     TG+ +   NK M N  WMREDTDFLMVVTTF+ATVAFQI
Sbjct: 1   MSRQNNNGAESVAITIDTTDDTGHEK---NKMMNNNNWMREDTDFLMVVTTFIATVAFQI 60

Query: 76  GTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWP 135
           GTNPPGGVWQ+DDKQGKYFAGKSIMATKSPS+F GFLVTITACFV SA+QFAVLFLKKWP
Sbjct: 61  GTNPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWP 120

Query: 136 -AEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLA 195
              K+WS SRFILYSTMGLA+SSMG +YGCSVRAYTPDSEE T  VISFITMLGFP+ LA
Sbjct: 121 VGAKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLA 180

Query: 196 AISLYLQFLNKSSSS 208
           AIS+YLQ+ +KSSSS
Sbjct: 181 AISIYLQYFSKSSSS 192

[Close]

BLAST of Lsi08G008490 vs. TrEMBL
Match: A0A0A0KIL3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363520 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.6e-26
Identity = 77/178 (43.26%), Postives = 110/178 (61.80%), Query Frame = 1


Query: 22  GVEETASLAISIDSVTGNHREAENKKMGNWMRE-DTDFLMVVTTFLATVAFQIGTNPPGG 81
           G +   +  +SID+ + N ++ E K  G WM+  D DF+MVV TF+A VAFQ+G NPPG 
Sbjct: 5   GAKNEEATVVSIDTASENKKDREEKNSG-WMKPGDVDFVMVVVTFIAAVAFQVGINPPGS 64

Query: 82  VWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSV 141
           VWQ +DK G + AGKSIMA+KSPSE+  F+  +T C   S +Q  V+ L +W   KS+SV
Sbjct: 65  VWQ-EDKNG-FTAGKSIMASKSPSEYKKFMAGVTLCLGFSLIQLCVM-LFRWYL-KSYSV 124

Query: 142 SRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLG-FPLGLAAISLY 198
            R I+Y  M   I+ M +S+  SV+A TPD +  +    +  ++LG + + L  I LY
Sbjct: 125 RRMIMYILMLCTIAPMIVSFWASVKALTPDEKLMSEITATIWSILGVYLISLPIILLY 177

[Close]

BLAST of Lsi08G008490 vs. TrEMBL
Match: A0A0A0KFJ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363010 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.9e-19
Identity = 61/147 (41.50%), Postives = 91/147 (61.90%), Query Frame = 1


Query: 53  REDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVT 112
           + D + LMV+ TF+ T++FQ GTNPPGGVWQ+  +     AGKSIMA+K+PS+F  F+V 
Sbjct: 28  KADIELLMVIITFIGTISFQAGTNPPGGVWQEGPE-----AGKSIMASKNPSQFVVFIVG 87

Query: 113 ITACFVLSALQFAVLFLKKWPAEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSE 172
           +T   VLSA Q   L + + P  K  S SR  +Y ++G+ I+++G +Y  S+ A TP S 
Sbjct: 88  VTVGMVLSAAQLLTL-MNELPYNK-LSDSRNFIYCSLGITITALGFAYWSSLTALTPSSM 147

Query: 173 ETTRNVISFITMLGFPLGLAAISLYLQ 200
                ++  IT L   + + AI +Y+Q
Sbjct: 148 ILEVRIV-LITELSIGVVIVAIIVYIQ 166

[Close]

BLAST of Lsi08G008490 vs. TrEMBL
Match: F8WLB2_CITUN (Ankyrin repeat family protein OS=Citrus unshiu GN=ORF45 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.2e-14
Identity = 54/153 (35.29%), Postives = 88/153 (57.52%), Query Frame = 1


Query: 50  NWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQD----DDKQGKYFAGKSIMATKSPSE 109
           +W+R+    LMVV + +AT+AFQ+G NPPGG+WQD    D+K   + AG SI+A  SP  
Sbjct: 272 DWLRKKRSTLMVVASLIATMAFQVGANPPGGLWQDNFVGDEKTPAHNAGSSILADLSPEA 331

Query: 110 FSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSVSRFILYSTMGLAISSMGISYGCSVR 169
           +  FL + +  FV S L   +L +   P      +  ++L   M +AI+++ ++Y  S+ 
Sbjct: 332 YGHFLTSNSIAFVAS-LSIILLLVSGLPIRN--RILMWVLMVIMWVAITAIAVTYLLSMS 391

Query: 170 AYTPDSEETT-RNVISFITMLGFPLGLAAISLY 198
           A+TP  E  T  +VI ++ ++   +GL AI  +
Sbjct: 392 AFTPAHEANTYASVIGYVILVW--IGLCAILFF 419

[Close]

BLAST of Lsi08G008490 vs. TrEMBL
Match: A0A022PT86_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a022409mg PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-13
Identity = 53/142 (37.32%), Postives = 78/142 (54.93%), Query Frame = 1


Query: 46  KKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDD---DKQGK-----YFAGKSI 105
           K+   W+ +    LMVV +  A++AFQ+G NPPGGVWQDD   D QG       +AG SI
Sbjct: 248 KQQLEWLEKHKSALMVVASLTASMAFQVGVNPPGGVWQDDKLRDDQGNPLPNPQYAGFSI 307

Query: 106 MATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSVSRFILYSTMGLAISSMG 165
            ATK P  ++ F +  T  FV S+L   +L +   P  + + +  +IL     +AI+++ 
Sbjct: 308 YATKHPRGYTRFCIITTFSFV-SSLSIILLLVSGLPIRRRFYM--WILIVITWVAITTIA 367

Query: 166 ISYGCSVRAYTPDSEETTRNVI 180
            +Y  S+ A TP+   T  NVI
Sbjct: 368 FAYVVSIVALTPNKNRTLDNVI 386

[Close]

BLAST of Lsi08G008490 vs. TAIR10
Match: AT3G13950.1 (AT3G13950.1 unknown protein)

HSP 1 Score: 50.1 bits (118), Expect = 2.0e-06
Identity = 19/41 (46.34%), Postives = 28/41 (68.29%), Query Frame = 1


Query: 46 KKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDD 87
          K+ G+W+ +    LMV  T +A ++FQ+  NPPGGVWQ D+
Sbjct: 24 KRQGDWLEKTRGNLMVTATVIAGMSFQVMVNPPGGVWQSDN 64

[Close]

BLAST of Lsi08G008490 vs. NCBI nr
Match: gi|659089597|ref|XP_008445596.1| (PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo])

HSP 1 Score: 298.9 bits (764), Expect = 6.9e-78
Identity = 152/193 (78.76%), Postives = 169/193 (87.56%), Query Frame = 1


Query: 16  MSRQSKGVEETASLAISIDSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGT 75
           MSRQ+ G E   S+AI+ID+    H + +     NW+REDTDFLMVVTTF+ATVAFQIGT
Sbjct: 1   MSRQNNGAE---SVAITIDTTETGHEKNKMMNNNNWIREDTDFLMVVTTFIATVAFQIGT 60

Query: 76  NPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWP-A 135
           NPPGGVWQ+DDKQGKYFAGKSIMATKSPS+FSG+LVTITACFV SA+QFAVLFLKKWP  
Sbjct: 61  NPPGGVWQEDDKQGKYFAGKSIMATKSPSDFSGYLVTITACFVFSAMQFAVLFLKKWPVG 120

Query: 136 EKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAI 195
            K+WS SRFILYSTMGLAISSMGI+YGCSVRAYTPDSEE TR VISFITMLGFP+GLAAI
Sbjct: 121 AKNWSFSRFILYSTMGLAISSMGIAYGCSVRAYTPDSEEKTRYVISFITMLGFPIGLAAI 180

Query: 196 SLYLQFLNKSSSS 208
           SLYL++ NKSSSS
Sbjct: 181 SLYLEYFNKSSSS 190

[Close]

BLAST of Lsi08G008490 vs. NCBI nr
Match: gi|778715279|ref|XP_011657373.1| (PREDICTED: uncharacterized protein LOC105435852 [Cucumis sativus])

HSP 1 Score: 284.6 bits (727), Expect = 1.3e-73
Identity = 147/195 (75.38%), Postives = 164/195 (84.10%), Query Frame = 1


Query: 16  MSRQSKGVEETASLAISIDSVTGNHREAENKKMGN--WMREDTDFLMVVTTFLATVAFQI 75
           MSRQ+    E+ ++ I     TG+ +   NK M N  WMREDTDFLMVVTTF+ATVAFQI
Sbjct: 1   MSRQNNNGAESVAITIDTTDDTGHEK---NKMMNNNNWMREDTDFLMVVTTFIATVAFQI 60

Query: 76  GTNPPGGVWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWP 135
           GTNPPGGVWQ+DDKQGKYFAGKSIMATKSPS+F GFLVTITACFV SA+QFAVLFLKKWP
Sbjct: 61  GTNPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWP 120

Query: 136 -AEKSWSVSRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLA 195
              K+WS SRFILYSTMGLA+SSMG +YGCSVRAYTPDSEE T  VISFITMLGFP+ LA
Sbjct: 121 VGAKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLA 180

Query: 196 AISLYLQFLNKSSSS 208
           AIS+YLQ+ +KSSSS
Sbjct: 181 AISIYLQYFSKSSSS 192

[Close]

BLAST of Lsi08G008490 vs. NCBI nr
Match: gi|449452915|ref|XP_004144204.1| (PREDICTED: uncharacterized protein LOC101208403 [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 8.0e-26
Identity = 77/178 (43.26%), Postives = 110/178 (61.80%), Query Frame = 1


Query: 22  GVEETASLAISIDSVTGNHREAENKKMGNWMRE-DTDFLMVVTTFLATVAFQIGTNPPGG 81
           G +   +  +SID+ + N ++ E K  G WM+  D DF+MVV TF+A VAFQ+G NPPG 
Sbjct: 5   GAKNEEATVVSIDTASENKKDREEKNSG-WMKPGDVDFVMVVVTFIAAVAFQVGINPPGS 64

Query: 82  VWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSV 141
           VWQ +DK G + AGKSIMA+KSPSE+  F+  +T C   S +Q  V+ L +W   KS+SV
Sbjct: 65  VWQ-EDKNG-FTAGKSIMASKSPSEYKKFMAGVTLCLGFSLIQLCVM-LFRWYL-KSYSV 124

Query: 142 SRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLG-FPLGLAAISLY 198
            R I+Y  M   I+ M +S+  SV+A TPD +  +    +  ++LG + + L  I LY
Sbjct: 125 RRMIMYILMLCTIAPMIVSFWASVKALTPDEKLMSEITATIWSILGVYLISLPIILLY 177

[Close]

BLAST of Lsi08G008490 vs. NCBI nr
Match: gi|659089463|ref|XP_008445521.1| (PREDICTED: uncharacterized protein LOC103488512 [Cucumis melo])

HSP 1 Score: 123.2 bits (308), Expect = 5.2e-25
Identity = 75/178 (42.13%), Postives = 108/178 (60.67%), Query Frame = 1


Query: 22  GVEETASLAISIDSVTGNHREAENKKMGNWMRE-DTDFLMVVTTFLATVAFQIGTNPPGG 81
           G +   +  ++ID+ T N ++ E    G WMR  D DF+M+V TF+A VAFQ+GTNPPG 
Sbjct: 5   GAKNEEATVVAIDTETENRKDGEEMNSG-WMRPGDVDFVMIVVTFIAAVAFQVGTNPPGS 64

Query: 82  VWQDDDKQGKYFAGKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSV 141
           VWQ +DK G + AGKSIMA+KSPSE+  F+  +T C   S +Q +V+ L +W   K++SV
Sbjct: 65  VWQ-EDKNG-FTAGKSIMASKSPSEYKKFMAGVTLCLSFSLIQLSVM-LFRWYL-KTYSV 124

Query: 142 SRFILYSTMGLAISSMGISYGCSVRAYTPDSEETTRNVISFITMLG-FPLGLAAISLY 198
            R I+Y  M   I+ M  S+  SV+A TPD +  +    +  +  G + + L  I LY
Sbjct: 125 RRMIMYLLMICTIAPMIFSFWASVKALTPDEKIMSEITATIWSSFGVYLMSLPLILLY 177

[Close]

BLAST of Lsi08G008490 vs. NCBI nr
Match: gi|659089467|ref|XP_008445524.1| (PREDICTED: uncharacterized protein LOC103488514 [Cucumis melo])

HSP 1 Score: 109.8 bits (273), Expect = 5.9e-21
Identity = 66/166 (39.76%), Postives = 96/166 (57.83%), Query Frame = 1


Query: 34  DSVTGNHREAENKKMGNWMREDTDFLMVVTTFLATVAFQIGTNPPGGVWQDDDKQGKYFA 93
           D  T    E +     +W + D + LMV+ TF+ T++FQ GTNPPGGVWQD  +     A
Sbjct: 8   DEETTIAAENQTSSEKSWQKTDIELLMVIITFIGTISFQAGTNPPGGVWQDGSE-----A 67

Query: 94  GKSIMATKSPSEFSGFLVTITACFVLSALQFAVLFLKKWPAEKSWSVSRFILYSTMGLAI 153
           GKSIMA+K+PS+F  F+V ++   VLSA Q   L + + P  K  S SR  +Y ++G  I
Sbjct: 68  GKSIMASKNPSQFLVFIVGVSTAMVLSAAQLMTL-MNELPYNK-LSDSRNFIYCSLGFII 127

Query: 154 SSMGISYGCSVRAYTPDSEETTRNVISFITMLGFPLGLAAISLYLQ 200
           +++G +YG SV A TP S        + +T+L     + AI +Y+Q
Sbjct: 128 TALGFAYGSSVTALTP-SSMIDEVKTALLTVLAVGAVVIAIVIYIQ 165

The following BLAST results are available for this feature:

BLAST of Lsi08G008490 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi08G008490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGU1_CUCSA	9.4e-74	75.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363530 PE=4 SV=1	[more]
A0A0A0KIL3_CUCSA	5.6e-26	43.26	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363520 PE=4 SV=1	[more]
A0A0A0KFJ5_CUCSA	3.9e-19	41.50	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363010 PE=4 SV=1	[more]
F8WLB2_CITUN	2.2e-14	35.29	Ankyrin repeat family protein OS=Citrus unshiu GN=ORF45 PE=4 SV=1	[more]
A0A022PT86_ERYGU	2.4e-13	37.32	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a022409mg PE=4 SV=1	[more]

BLAST of Lsi08G008490 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G13950.1	2.0e-06	46.34	unknown protein	[more]

BLAST of Lsi08G008490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089597\|ref\|XP_008445596.1\|	6.9e-78	78.76	PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo]	[more]
gi\|778715279\|ref\|XP_011657373.1\|	1.3e-73	75.38	PREDICTED: uncharacterized protein LOC105435852 [Cucumis sativus]	[more]
gi\|449452915\|ref\|XP_004144204.1\|	8.0e-26	43.26	PREDICTED: uncharacterized protein LOC101208403 [Cucumis sativus]	[more]
gi\|659089463\|ref\|XP_008445521.1\|	5.2e-25	42.13	PREDICTED: uncharacterized protein LOC103488512 [Cucumis melo]	[more]
gi\|659089467\|ref\|XP_008445524.1\|	5.9e-21	39.76	PREDICTED: uncharacterized protein LOC103488514 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR026961	PGG_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G008490.1	Lsi08G008490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026961	PGG domain	PFAM	PF13962	PGG	coord: 50..164 score: 3.3
None	No IPR available	PANTHER	PTHR24177	FAMILY NOT NAMED	coord: 16..185 score: 3.0
None	No IPR available	PANTHER	PTHR24177:SF17	SUBFAMILY NOT NAMED	coord: 16..185 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi08G008490	MELO3C011475	Melon (DHL92) v3.5.1	lsimeB470
Lsi08G008490	ClCG08G009950	Watermelon (Charleston Gray)	lsiwcgB438
Lsi08G008490	MELO3C011475.2	Melon (DHL92) v3.6.1	lsimedB490
Lsi08G008490	Bhi04G001174	Wax gourd	lsiwgoB606
Lsi08G008490	CsGy6G018630	Cucumber (Gy14) v2	cgyblsiB437
Lsi08G008490	CsaV3_6G032080	Cucumber (Chinese Long) v3	cuclsiB500

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi08G008490	Cucurbita maxima (Rimu)	cmalsiB190
Lsi08G008490	Cucurbita maxima (Rimu)	cmalsiB737
Lsi08G008490	Cucurbita moschata (Rifu)	cmolsiB176
Lsi08G008490	Cucurbita moschata (Rifu)	cmolsiB180
Lsi08G008490	Cucurbita moschata (Rifu)	cmolsiB728
Lsi08G008490	Cucurbita pepo (Zucchini)	cpelsiB098
Lsi08G008490	Cucurbita pepo (Zucchini)	cpelsiB692
Lsi08G008490	Wild cucumber (PI 183967)	cpilsiB478
Lsi08G008490	Cucumber (Chinese Long) v2	culsiB470
Lsi08G008490	Watermelon (97103) v1	lsiwmB465
Lsi08G008490	Silver-seed gourd	carlsiB129
Lsi08G008490	Silver-seed gourd	carlsiB636
Lsi08G008490	Watermelon (97103) v2	lsiwmbB444
Lsi08G008490	Cucumber (Gy14) v1	cgylsiB045