Lsi08G006800 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi08G006800
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr08 : 15137652 .. 15139679 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAAGGTTTGTGGTCTTTCTTACTTTAGAATCTGTTCAATTTTAATTTAGGTATTTTTATATGTTTAACTTTAGTCTTTTCTGTGTTCAATCTTCAAGACTTTTATTATTGGTTAAAATATTATATTTTTAAATGTTTAATAAATTTTAAATTTAATCTCTTAAAGTTAATTTTTATCAAATTGATTAAATAATAACCATAATTTTTATATGTGAATATTTTCAAAATTATCATAAAAATGTTAATAAATTTTTTTTTAAAAAAACAATCAATCAACAAACAAGAAAAGATGATTAAATTTTAGATTTCTTGAAAAAATTGAACAAAATTTAAAGTATGTCTTTTTACTATAAATTTTGAAAAAATATTCATGAAAAATAATATTATTATTTAATTAATTTTGACAAAAATAAACTTTGGAAGGATTAAATTTAACATATATTCATGTATTTTAACCCATTGATTATGTGGAATAAAAATAAAACAGCCATCTATACTTCCAATAACTTTAATACAGTTTTCATCGAGGGAATTTCGAAAATGCCAGAATGCTACAAACTCAAATTACAAAAGAAATCACTCTCTTTCATGATAGCCAAATGAAGAACACTCCCAAATTTCAATGAAGTATTGACTAAGAAACAGAAAAAAGAACAAAAACAAAATCAAAGAAGACACTCCAAAGAATAAGAACAAATGTAGAAAAAAGAATACAAGTCTAACTACCTGTAGAGTTTCCAAAGACAACAACACAACTTCATCTTTTGAACCGATCATTGAGTCAAATTTGTGTACTTCTTTGCACATTAAGGGTCGCCTCTGGTACGTGCAAATCTAATAGACTGGTACCAAAAATTTTCATTGCAACACATAAACGAGCTTAATTTCAGTGTCATGGCGATTTAAAGGTGGTCATCTTGTCAGTGCGAGACTATTGAACAGGGTTTCAAGGCCTGGCTGCTGTTACCACCTGTGATCCGGTTTCAAGGCCTAGCTGCTGTTACCACCTGCAATCCACCGCCACACTCCGCCAGAACCTTGTCTTTGAACTGATGAGGCAGCCTCCATATGTTTGTCCAAAGCAGATTTTTGTTCCCTCAGGAGTTGGATCTCATTCTCAATGGATTGCATTGATTCAAGCATCTTTTGTAATTCAGCTATTTGTGCCTGTTGGTCAATCAGGAAAAAAAAAAAAAAAAACTCAGAAAATGATGCCTCAGTTAAGATCTTTCAATCAATATGACTATCGAAAGACAATTTTTGATGCATCGTCCCAGCTAGTCAAGAGATGGGAAGAGGGAATGTAGATGTTCGTTAAGTTTAGGTTAAATTGTAAATTTGGTCCCTATGGTTTATAAATAAAACTTCGTTTTTATGGTTTGATAAAAGTCCTCATAAATAATAGGTACGGTAGGGACTATATATGAGGATTTTATTATGGACTTTTTATGAGATTTTAACAAACTACAAGGGCTAAGTTCTAACTTTTAACTACTAGGTCAAATTTATAATTTAAACTTGATATTATTATGAAATATAACCTCCAATTTAAAGCATCTTGATCGCTCAGCAATTAATTGGCCTTGCACCGACTGTAATTCCTGAGATAAAAAGTCGAAAATCATAGAATTCAGAACTAAATTTTAAAATAGTATCTTTAAACGCAGATCTTACCTTAAAGACATACCTTAGACAGTTCTGCATGAGTGGTGTTTACTTCATCAATTTCTTGTTGAAGTTTAGAATTTTCACCTTGAACTTCAGAAAGTGCTAGTCCTAACTTAGCTTTCTCTTCTCTAATGGCCTCAAGTTCAATAGCACCATTTGGTTGAGAATGCTTTTCTTGTCTACCATTAGAGACACCATCTTCTATTATTGCGAAGTCCAATTTTTCAGTCTTGGCTAAGGCATATGCAGCAGTAACAGAAGCTGCCGCTGCCGCTGCTGCTGGTGATTGGAATATCTTGGGACGCAATGAGTCTCTTGGTTTGGGTCTCATGACAAAAATCTACAAGGACACATAA

mRNA sequence

ATGGTAAAGACAACAACACAACTTCATCTTTTGAACCGATCATTGAGTCAAATTTGTGTACTTCTTTGCACATTAAGGGTCGCCTCTGGGTTTCAAGGCCTGGCTGCTGTTACCACCTGTGATCCGGTTTCAAGGCCTAGCTGCTGTTACCACCTGCAATCCACCGCCACACTCCGCCAGAACCTTGTCTTTGAACTGATGAGGCAGCCTCCATATGTTTGTCCAAAGCAGATTTTTGTTCCCTCAGGAGTTGGATCTCATTCTCAATGGATTGCATTGATTCAAGCATCTTTTGTAATTCAGCTATTTGTGCCTGTTGTCTTGGCTAAGGCATATGCAGCAGTAACAGAAGCTGCCGCTGCCGCTGCTGCTGGTGATTGGAATATCTTGGGACGCAATGAGTCTCTTGGTTTGGGTCTCATGACAAAAATCTACAAGGACACATAA

Coding sequence (CDS)

ATGGTAAAGACAACAACACAACTTCATCTTTTGAACCGATCATTGAGTCAAATTTGTGTACTTCTTTGCACATTAAGGGTCGCCTCTGGGTTTCAAGGCCTGGCTGCTGTTACCACCTGTGATCCGGTTTCAAGGCCTAGCTGCTGTTACCACCTGCAATCCACCGCCACACTCCGCCAGAACCTTGTCTTTGAACTGATGAGGCAGCCTCCATATGTTTGTCCAAAGCAGATTTTTGTTCCCTCAGGAGTTGGATCTCATTCTCAATGGATTGCATTGATTCAAGCATCTTTTGTAATTCAGCTATTTGTGCCTGTTGTCTTGGCTAAGGCATATGCAGCAGTAACAGAAGCTGCCGCTGCCGCTGCTGCTGGTGATTGGAATATCTTGGGACGCAATGAGTCTCTTGGTTTGGGTCTCATGACAAAAATCTACAAGGACACATAA

Protein sequence

MVKTTTQLHLLNRSLSQICVLLCTLRVASGFQGLAAVTTCDPVSRPSCCYHLQSTATLRQNLVFELMRQPPYVCPKQIFVPSGVGSHSQWIALIQASFVIQLFVPVVLAKAYAAVTEAAAAAAAGDWNILGRNESLGLGLMTKIYKDT
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi08G006800.1Lsi08G006800.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi08G006800Cucurbita moschata (Rifu)cmolsiB281
Lsi08G006800Cucurbita moschata (Rifu)cmolsiB381
Lsi08G006800Cucurbita moschata (Rifu)cmolsiB697
Lsi08G006800Cucurbita moschata (Rifu)cmolsiB700
Lsi08G006800Cucurbita pepo (Zucchini)cpelsiB161
Lsi08G006800Cucurbita pepo (Zucchini)cpelsiB382
Lsi08G006800Cucurbita pepo (Zucchini)cpelsiB384
Lsi08G006800Wild cucumber (PI 183967)cpilsiB145
Lsi08G006800Wild cucumber (PI 183967)cpilsiB393
Lsi08G006800Cucumber (Chinese Long) v2culsiB146
Lsi08G006800Cucumber (Chinese Long) v2culsiB389
Lsi08G006800Melon (DHL92) v3.5.1lsimeB463
Lsi08G006800Melon (DHL92) v3.5.1lsimeB470
Lsi08G006800Melon (DHL92) v3.5.1lsimeB483
Lsi08G006800Watermelon (Charleston Gray)lsiwcgB435
Lsi08G006800Watermelon (Charleston Gray)lsiwcgB443
Lsi08G006800Watermelon (97103) v1lsiwmB464
Lsi08G006800Watermelon (97103) v1lsiwmB475
Lsi08G006800Watermelon (97103) v1lsiwmB485
Lsi08G006800Cucumber (Gy14) v2cgyblsiB127
Lsi08G006800Cucumber (Gy14) v2cgyblsiB354
Lsi08G006800Melon (DHL92) v3.6.1lsimedB482
Lsi08G006800Melon (DHL92) v3.6.1lsimedB490
Lsi08G006800Silver-seed gourdcarlsiB243
Lsi08G006800Silver-seed gourdcarlsiB628
Lsi08G006800Silver-seed gourdcarlsiB769
Lsi08G006800Cucumber (Chinese Long) v3cuclsiB153
Lsi08G006800Cucumber (Chinese Long) v3cuclsiB412
Lsi08G006800Watermelon (97103) v2lsiwmbB426
Lsi08G006800Watermelon (97103) v2lsiwmbB439
Lsi08G006800Watermelon (97103) v2lsiwmbB448
Lsi08G006800Wax gourdlsiwgoB594
Lsi08G006800Wax gourdlsiwgoB618
Lsi08G006800Bottle gourd (USVL1VR-Ls)lsilsiB134
Lsi08G006800Bottle gourd (USVL1VR-Ls)lsilsiB152
Lsi08G006800Cucumber (Gy14) v1cgylsiB314
Lsi08G006800Cucumber (Gy14) v1cgylsiB498
Lsi08G006800Cucurbita maxima (Rimu)cmalsiB293
Lsi08G006800Cucurbita maxima (Rimu)cmalsiB395
Lsi08G006800Cucurbita maxima (Rimu)cmalsiB703
Lsi08G006800Cucurbita maxima (Rimu)cmalsiB706