Lsi08G006740 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi08G006740
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	DNA binding protein
Location	chr08 : 15069814 .. 15074745 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGCTATAAAAGGTGGGTGGACGGGGCGTCCTCTTGCCCTAGCCAAGAACAATGAGCCTGAAGGGAGGAAGACAAGAATTCGGCGTTCAAAGGAGGAAAGGAAGGCAATGGTTGAAGTCTTCATAAAAAAGTAACCACGCAATGGTTTTAAATTCAATTCATATTTTCTATAGAATGCATGGATTGGTTAGATTGTTGAAATTATTAATTGTCTATGCATGATGACATTTGACCTGCAGCTATATTGAATTCCCAAGTGGATGATATCTTTCTCGAGAAAACCTTTTCCTGCTATATGATGTTCTCACTCCATGATTTATCTGGCTGTTCATGTTTAAACATGGATCATTGTTGTTTGGCACTAGTTCTTGGATTTGTTTACGCCGCTGTTTTCTTGTAAGCTTTTAGATAGCAAGCATCTAGAAACTGTTAGGTTGATAAATTCCCTTGCAGCTTAATAGTCATGGTTATTTTTATCCCAAAAACAGTCGTGGTTATTTCCCCTTAGTATGAAGTGGGATAAAAACATAATTCATAGATGTTAACAGGGGAATATTTATGGAAGTTTTAGCTCCCAGAGGAGGTAAGGGGAAAAAAGCTTCCTTCCTCAACATTTTGTTGATTGCACGTATATTGGATGAACATTTGTATTTTTGAACAAGAAAGAATGGATGAGCATTTTTTTGGGCCATATAAATAAACATAAAAGTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTCTCAAGATAGAGCTATTGAAAATCAGATCCTTGCGAAACACTATTGTATATAAGCAAAATAATAATGATGGTAGTCTTATTTGAAGGAGTGTAACCTTCTAATGTTGAGAGTTCAAGGGAACTCAACTCAACTCTTGCCAAAATAATAATAATAATAATAATAATAATAAAAGAAAGAAAAATAAAAAGGAAATGGGTTATTCATCTTCTCCATTTATTTCATGAAAAATCTCTATAACCGAAGAAATCAGTAACCCGTGAAACCTTGCAATAAGTGACTTTGTCGACTGCTATCTACATACTAATAAAGATAAAATAAAGGGGTTAAAAGCCTTTCAGGATAACTGGTATCTAAAAGCATAATTTAATTAATAACATAGAATAGGATTGTAGCCTTTCTTCTCCCTTACATGACCAACCTTTTCCTAAAGGGCGAGATCTTTGAGGATGATTCTGGTATTCTGTGACTTATTGTTGGGTCTTTCGATTTCAGAATACACCAGCTCCTTTGATATGTTTTCTTCAAATCTCAGTATTGAAGCCTTTAAAAATGTTAGAGCTCTCTTGGGCAAGGTGAAAAGGCTCTAGTTCTTCTTATTGCTCCAGATCTGGTCTTCTTTGTTAAAAATGAGGTTGCATGATATTTAAATAGAAATAATAAAATTATTCAAGAGAGTTTAGACCTCTATGGTGGAACTTTGGAGAATCTGAAACTTCTCAAAAAATTTATCTGGACATGGAAATTCTCATTCCTTATTAACCTCTCGATTTAAATACTATGATATGAAAACAATTTACTGTTAGAAATCCTAAAATCAAAGAAATTACTAGACCACAAAAACTTATTTAACTGTTAATGACTAAATCTAGATATGGATGTAATTTATTTAATTATTAGAAGTATGAAATCGCATCATAACATCTTGCTTGCAGGTATCAGGAATCAAATAATGGGAGTTTCCCCTCGCTCAACCTTACTCACAAGGAAGTTGGTGGATCTTTCTATACGGTACGAGAGATTGTACGTGATATAATCCAAGAAAACAGAGTCCTTGGTCCGGGAAAGTTGTTATTAGAAGAGCACAGCACTGATCATTTACTTGAAGAGAATCCACTCCACTCAATTGCTATTGAACCTCAATCTCCTTTAACCGTATCGTCTAAGGAATTCTACTCTCCAGTTGACTACTACAACCAATATATAAATGAAGAATCAATCATTGTTTCAGATGAGCAATGCACTGCAACAAATATTCAGGGATCACAGAATGGGCCAATAATTAATGGCAGCCTGGTGGATGTAAGGGACAAGGATTCTGTTGAATTTATCAAGCCAGAGTTGCTAGTAAATGAACACAAGAAAGTAGAGGAAGTGATGAAAGAGGAATCAGGAATGCCAATTAATCATGTAAGTCCTTTGGCAACAGATGTTGTGGTAGAGACATTCCCATTGGATTCAGTTTCTTGGGGTGTTAATGGTTCAGATGTAAGATCTGAAATGTTGATTTCAACCAGTGCCTCAGAAAAGCAAGTTAGTCAAACCATTGAGTTAGAATCAGATGTTGGCTTGTTTAACATTAAAGCTTCTGGCTGTGTAGTTGAGAAAGCAGAGAAAAACTTTGCAGGTCCATTATCAGAAACAAAGTCTGACTTGGTGGAGGTAGCACAAATTGTTGAAACATCTAATGGATCTACTGTGAAAGAAGGTATCATATATGAAGTTGGGGGTCCTGAGTTGGAAGTTTGCAGTGATAATCCAATATCTGTGACCTTTGAACAAGGCCAGAAATCTAGTGAAATGAAGGTGCGTGTTCTACTTTTTTCTGGCTAAGCATTTAATGACTTTTTTTTTTTTTTTTTTTTCTTCTATCGTCTTTTAAATTTCTGGGGCATAGGTGTAACTTCTTAAAGTTGACTATTAGGTTATGACAAAATAGTGTGGGGCAATTACTTGAGTAGTTTCTGGGCCAGTTGAAACTTTAGATTGAAGAAAAAGAATAGAGAATTCCTTTTATCTAAAAACTTTATGAATGACATTTGGACGTTCATTTGCACGGTGGTCTTGTTTCCATGTTTCTGAAATACCTACTTTTTTATTTGAAAAATGCGAGAAACACCTACTTTTTTATTTGAAAAATGCACCTAGGACTGCATCCATCTTTTGGCAGCCCACCCAGCTGTCCAACCAAAGTTTGCCATGTGACAACTCTTCTCTCTTCGTTTTTTTTTTCTTTTTCATTTTGCTGTGTGATTAAGGTGGACTGCTAGAAGATGAGTGCAACTCAGTATGCATCCATGTATCATTATCGCTCATAAATAAATTGTCAAACAATATGTTCTCATCCAACCAGAGAAAACCTTGTCTTTCTTTTTTTTCTTTTGGCGGGGAGATGAGAAAGAAAAAGGAAACGAAGAAAATGATATGTTGGACTTTGGAGTTGTTTATTTTGAGGATTTGCCACTCTTTTTGTGTTTGTAACTCAACTTTTGAAAGCCTAATTTGCATTTGGACCAATATTGATGCTCTTTTACAGGCTCCAAATGCTTCTCCAAGTACTATTGAGAGTCTCAACAAGACATTCAGCAATGGCTTTGATCAGGCCTCAAAAATCAAAGAGGAGACAGAGATGGAAAATAAAGTAGATGCTGAACAAACTGGTGGCTCCCAGAAAGAAAGCATTCCAACTTTAAACAGAATTAATCTGTAAGAATATCCCCCCCCCCAAAATTAGTCAATCATTTTACATGCTTATTGGTGAGAAGGTACATCTGTTCGCTTATTGCGAATTGATTTTGAGATGAAATCTCATGATTATCTAATACTTATCAAACAGTTTAACCAACATATTCATCCTCCACCTTTTTTTTTTCTTTTTTTCCAGTGAATCATGGGAAGGGATGTCCAAAAACTCGTCAAAACCCGAAAACAACCTGCTTTTGGAAATCTTCAAGGCATTCATTGCTGCCTTCGTGAAGTTTTGGTCCGAGTAAGTAATATGATTGTCAAGTAGACGAATAGAGAGTAGTAGTTAAATTTTCTGCCACAGAACCTGTCTGTCTTTGTACCAAGTTGCAGTCGGTTACCCCGTTCAGTCCAGTCGGTCCCATCATCGATATTTATGAGGACAAAACTGGATTCTGAATGTGGGTTGGCATTTCTGTACTCTGCA

mRNA sequence

ATGCATGCTATAAAAGGTGGGTGGACGGGGCGTCCTCTTGCCCTAGCCAAGAACAATGAGCCTGAAGGGAGGAAGACAAGAATTCGGCGTTCAAAGGAGGAAAGGAAGGCAATGGTTGAAGTCTTCATAAAAAAGTATCAGGAATCAAATAATGGGAGTTTCCCCTCGCTCAACCTTACTCACAAGGAAGTTGGTGGATCTTTCTATACGGTACGAGAGATTGTACGTGATATAATCCAAGAAAACAGAGTCCTTGGTCCGGGAAAGTTGTTATTAGAAGAGCACAGCACTGATCATTTACTTGAAGAGAATCCACTCCACTCAATTGCTATTGAACCTCAATCTCCTTTAACCGTATCGTCTAAGGAATTCTACTCTCCAGTTGACTACTACAACCAATATATAAATGAAGAATCAATCATTGTTTCAGATGAGCAATGCACTGCAACAAATATTCAGGGATCACAGAATGGGCCAATAATTAATGGCAGCCTGGTGGATGTAAGGGACAAGGATTCTGTTGAATTTATCAAGCCAGAGTTGCTAGTAAATGAACACAAGAAAGTAGAGGAAGTGATGAAAGAGGAATCAGGAATGCCAATTAATCATGTAAGTCCTTTGGCAACAGATGTTGTGGTAGAGACATTCCCATTGGATTCAGTTTCTTGGGGTGTTAATGGTTCAGATGTAAGATCTGAAATGTTGATTTCAACCAGTGCCTCAGAAAAGCAAGTTAGTCAAACCATTGAGTTAGAATCAGATGTTGGCTTGTTTAACATTAAAGCTTCTGGCTGTGTAGTTGAGAAAGCAGAGAAAAACTTTGCAGGTCCATTATCAGAAACAAAGTCTGACTTGGTGGAGGTAGCACAAATTGTTGAAACATCTAATGGATCTACTGTGAAAGAAGGTATCATATATGAAGTTGGGGGTCCTGAGTTGGAAGTTTGCAGTGATAATCCAATATCTGTGACCTTTGAACAAGGCCAGAAATCTAGTGAAATGAAGGCTCCAAATGCTTCTCCAAGTACTATTGAGAGTCTCAACAAGACATTCAGCAATGGCTTTGATCAGGCCTCAAAAATCAAAGAGGAGACAGAGATGGAAAATAAAGTAGATGCTGAACAAACTGGTGGCTCCCAGAAAGAAAGCATTCCAACTTTAAACAGAATTAATCTTGAATCATGGGAAGGGATGTCCAAAAACTCGTCAAAACCCGAAAACAACCTGCTTTTGGAAATCTTCAAGGCATTCATTGCTGCCTTCGTGAAGTTTTGGTCCGATCGGTTACCCCGTTCAGTCCAGTCGGTCCCATCATCGATATTTATGAGGACAAAACTGGATTCTGAATGTGGGTTGGCATTTCTGTACTCTGCA

Coding sequence (CDS)

ATGCATGCTATAAAAGGTGGGTGGACGGGGCGTCCTCTTGCCCTAGCCAAGAACAATGAGCCTGAAGGGAGGAAGACAAGAATTCGGCGTTCAAAGGAGGAAAGGAAGGCAATGGTTGAAGTCTTCATAAAAAAGTATCAGGAATCAAATAATGGGAGTTTCCCCTCGCTCAACCTTACTCACAAGGAAGTTGGTGGATCTTTCTATACGGTACGAGAGATTGTACGTGATATAATCCAAGAAAACAGAGTCCTTGGTCCGGGAAAGTTGTTATTAGAAGAGCACAGCACTGATCATTTACTTGAAGAGAATCCACTCCACTCAATTGCTATTGAACCTCAATCTCCTTTAACCGTATCGTCTAAGGAATTCTACTCTCCAGTTGACTACTACAACCAATATATAAATGAAGAATCAATCATTGTTTCAGATGAGCAATGCACTGCAACAAATATTCAGGGATCACAGAATGGGCCAATAATTAATGGCAGCCTGGTGGATGTAAGGGACAAGGATTCTGTTGAATTTATCAAGCCAGAGTTGCTAGTAAATGAACACAAGAAAGTAGAGGAAGTGATGAAAGAGGAATCAGGAATGCCAATTAATCATGTAAGTCCTTTGGCAACAGATGTTGTGGTAGAGACATTCCCATTGGATTCAGTTTCTTGGGGTGTTAATGGTTCAGATGTAAGATCTGAAATGTTGATTTCAACCAGTGCCTCAGAAAAGCAAGTTAGTCAAACCATTGAGTTAGAATCAGATGTTGGCTTGTTTAACATTAAAGCTTCTGGCTGTGTAGTTGAGAAAGCAGAGAAAAACTTTGCAGGTCCATTATCAGAAACAAAGTCTGACTTGGTGGAGGTAGCACAAATTGTTGAAACATCTAATGGATCTACTGTGAAAGAAGGTATCATATATGAAGTTGGGGGTCCTGAGTTGGAAGTTTGCAGTGATAATCCAATATCTGTGACCTTTGAACAAGGCCAGAAATCTAGTGAAATGAAGGCTCCAAATGCTTCTCCAAGTACTATTGAGAGTCTCAACAAGACATTCAGCAATGGCTTTGATCAGGCCTCAAAAATCAAAGAGGAGACAGAGATGGAAAATAAAGTAGATGCTGAACAAACTGGTGGCTCCCAGAAAGAAAGCATTCCAACTTTAAACAGAATTAATCTTGAATCATGGGAAGGGATGTCCAAAAACTCGTCAAAACCCGAAAACAACCTGCTTTTGGAAATCTTCAAGGCATTCATTGCTGCCTTCGTGAAGTTTTGGTCCGATCGGTTACCCCGTTCAGTCCAGTCGGTCCCATCATCGATATTTATGAGGACAAAACTGGATTCTGAATGTGGGTTGGCATTTCTGTACTCTGCA

Protein sequence

MHAIKGGWTGRPLALAKNNEPEGRKTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLTHKEVGGSFYTVREIVRDIIQENRVLGPGKLLLEEHSTDHLLEENPLHSIAIEPQSPLTVSSKEFYSPVDYYNQYINEESIIVSDEQCTATNIQGSQNGPIINGSLVDVRDKDSVEFIKPELLVNEHKKVEEVMKEESGMPINHVSPLATDVVVETFPLDSVSWGVNGSDVRSEMLISTSASEKQVSQTIELESDVGLFNIKASGCVVEKAEKNFAGPLSETKSDLVEVAQIVETSNGSTVKEGIIYEVGGPELEVCSDNPISVTFEQGQKSSEMKAPNASPSTIESLNKTFSNGFDQASKIKEETEMENKVDAEQTGGSQKESIPTLNRINLESWEGMSKNSSKPENNLLLEIFKAFIAAFVKFWSDRLPRSVQSVPSSIFMRTKLDSECGLAFLYSA

Homology

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BLAST of Lsi08G006740 vs. TrEMBL
Match: A0A0A0LML9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G384970 PE=4 SV=1)

HSP 1 Score: 644.0 bits (1660), Expect = 1.3e-181
Identity = 348/458 (75.98%), Postives = 381/458 (83.19%), Query Frame = 1


Query: 1   MHAIKGGWTGRPLALAKNNEPEGRKTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT 60
           MHAIKGGWTGRPLALAKNNE EGR+TRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT
Sbjct: 1   MHAIKGGWTGRPLALAKNNEAEGRRTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT 60

Query: 61  HKEVGGSFYTVREIVRDIIQENRVLGPGKLLLEEHSTDHLLEENPLHSIAIEPQSPLTVS 120
           HKEVGGSFYTVREIVRDIIQENR+LGPG LLLEEH+ DH LE+NPLHSIAIEP SPLT+S
Sbjct: 61  HKEVGGSFYTVREIVRDIIQENRILGPGNLLLEEHNPDHSLEQNPLHSIAIEPHSPLTLS 120

Query: 121 SKEFYSPVDYYNQYINEESIIVSDEQCTATNIQGSQNGPIINGSLVDVRDKDSVEFIKPE 180
           S E + PV+Y N+YI+EE I VSDEQCTATNIQGSQN  IINGSLVDV ++DS EFI+ E
Sbjct: 121 SNEVHFPVNY-NKYISEEPIFVSDEQCTATNIQGSQNESIINGSLVDVSNEDSDEFIQSE 180

Query: 181 LLVN-------------------------------EHKKVEEVMKEESGMPINHVSPLAT 240
           LLVN                               EH KVEEV+KEESGMPIN+V+PLAT
Sbjct: 181 LLVNGHKEVEEMVEKESGMPKNHVTSLATDVVLVNEHNKVEEVVKEESGMPINYVTPLAT 240

Query: 241 DVVVETFPLDSVSWGVNGSDVRSEMLISTSASEKQVSQTIELESDVGLFNIKASGCVVEK 300
           DVVVETFPLDSV W VNG DVRSE+LISTSASEKQVSQ+IELESDVGLFNI  S CVVEK
Sbjct: 241 DVVVETFPLDSVPWDVNGFDVRSEILISTSASEKQVSQSIELESDVGLFNITTSDCVVEK 300

Query: 301 AEKNFAGPLSETKSDLVEVAQIVETSNGSTVKEGIIYEVGGPELEVCSDNPISVTFEQGQ 360
           AE+N   PL++TKSDLV+ AQIVE SNGSTVKEG I+EVGGPELEVCSD P+SV+FEQGQ
Sbjct: 301 AEENLTEPLTKTKSDLVDEAQIVEISNGSTVKEGSIHEVGGPELEVCSDTPVSVSFEQGQ 360

Query: 361 KSSEMKAPNASPSTIESLNKTFSNGFDQASKIKEETEMENKVDAEQTGGSQKESIPTLNR 420
           KSS+MK+P AS    E+LNKTFSN FDQASKI    E++NKVD  QTGGSQKES+PTLNR
Sbjct: 361 KSSKMKSPIAS----ENLNKTFSNDFDQASKI----EIKNKVDPGQTGGSQKESVPTLNR 420

Query: 421 INLESWEGMSKNSSKPENNLLLEIFKAFIAAFVKFWSD 428
           INL+SWEGMSKNSSKP NN LLEI K+FI AFVKFWS+
Sbjct: 421 INLDSWEGMSKNSSKPGNNPLLEIIKSFITAFVKFWSE 449

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BLAST of Lsi08G006740 vs. TrEMBL
Match: Q5DW97_CUCSA (Plastid envelope DNA binding protein (Fragment) OS=Cucumis sativus GN=PEND PE=4 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 6.0e-97
Identity = 198/279 (70.97%), Postives = 220/279 (78.85%), Query Frame = 1


Query: 64  VGGSFYTVREIVRDIIQENRVLGPGKLLLEEHSTDHLLEENPLHSIAIEPQSPLTVSSKE 123
           VGGSFYTVREIVRDIIQENR+LGPG LLLEEH+ DH LE+NPLHSIAIEP SPLT+SS E
Sbjct: 1   VGGSFYTVREIVRDIIQENRILGPGNLLLEEHNPDHSLEQNPLHSIAIEPHSPLTLSSNE 60

Query: 124 FYSPVDYYNQYINEESIIVSDEQCTATNIQGSQNGPIINGSLVDVRDKDSVEFIKPE--- 183
            + PV+Y N+YI+EE I VSDEQCTATNIQGSQN  IINGSLVDV ++DS EFI+ E   
Sbjct: 61  VHFPVNY-NKYISEEPIFVSDEQCTATNIQGSQNESIINGSLVDVSNEDSDEFIQSELLV 120

Query: 184 ----------------------------LLVNEHKKVEEVMKEESGMPINHVSPLATDVV 243
                                       +LVNEH KVEEV+KEESGMPIN+V+PLATDVV
Sbjct: 121 NGHKEVEEMVEKESGMPKNHVTSLATDVVLVNEHNKVEEVVKEESGMPINYVTPLATDVV 180

Query: 244 VETFPLDSVSWGVNGSDVRSEMLISTSASEKQVSQTIELESDVGLFNIKASGCVVEKAEK 303
           VETFPLDSV W VNG DVRSE+LISTSASEKQVSQ+IELESDVGLFNI  S CVVEKAE+
Sbjct: 181 VETFPLDSVPWDVNGFDVRSEILISTSASEKQVSQSIELESDVGLFNITTSDCVVEKAEE 240

Query: 304 NFAGPLSETKSDLVEVAQIVETSNGSTVKEGIIYEVGGP 312
           N   PL++TKSDLV+ AQIVE SNGSTVKEG I+EVGGP
Sbjct: 241 NLTEPLTKTKSDLVDEAQIVEISNGSTVKEGSIHEVGGP 278

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BLAST of Lsi08G006740 vs. TrEMBL
Match: F6H824_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0250g00040 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 8.7e-72
Identity = 202/449 (44.99%), Postives = 270/449 (60.13%), Query Frame = 1


Query: 1   MHAIKGGWTGRPLALAKNNEPEGRKTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT 60
           MHAIKGGW G+  ALAK N+   RK+RIRRSKEERK MVE FIKKYQ+SN+G+FPSLNLT
Sbjct: 1   MHAIKGGWVGQTFALAKGNDSGRRKSRIRRSKEERKEMVESFIKKYQKSNDGNFPSLNLT 60

Query: 61  HKEVGGSFYTVREIVRDIIQENRVLGPGKLLLEEHSTDHLLEENPLHSIAIEPQSPLTVS 120
           HKEVGGSFYTVREIVR+IIQENRVLGP KL  EE     L E+ PL SI++EPQ  L+ S
Sbjct: 61  HKEVGGSFYTVREIVREIIQENRVLGPAKLTPEEQHMVELSEQYPLGSISLEPQVHLS-S 120

Query: 121 SKEFYSPVDYYNQYINEESIIVSDEQCTATNIQGSQNGPIINGSLVDVRDKDSVEFIKPE 180
           S E  S  D++ Q  +EE ++ S  + T +      NG IINGS ++ ++++S   I  E
Sbjct: 121 SVETDSVPDHH-QIRSEELVLDSSRKYTGSEHHIFDNGWIINGSHMEKKNEESDMPIYAE 180

Query: 181 LLVNEHKKVEEVMKEESGMPINHVSPLATDVVVETFPLDSV---SWGVNGSDVRSEMLIS 240
           L V E    +  + EE  +    V+ +A DVVVETFPL S    S+ ++G     E  I 
Sbjct: 181 LEVAETSGAKNALLEEVEVTAAKVTDIAADVVVETFPLRSFTKPSYSLDGE--LGEASIM 240

Query: 241 TSASEKQVSQTIELES-DVGLFNIKAS-----GCVVEKAEKNFAGPLSETKSDLVE---- 300
           T   E++ ++ +E E+    + + K S     G V EKA  +  G L E  S L++    
Sbjct: 241 TGILEEKETEKVETETGKSSVLDGKNSVEDPFGLVDEKAVTSPGGSLLEMNSGLIDEEAV 300

Query: 301 ---VAQIVETSNGSTVKEGIIY-EVGGPELEV---CSDNPISVTFEQGQKSSEMKAPNAS 360
                 ++E+SN +++ + +++ +  G  LEV     D   S TFEQ Q+ +E K  + S
Sbjct: 301 KNVADPLLESSNITSINKDVVHDDQDGTVLEVKISHGDCLSSDTFEQSQEIAENKNLD-S 360

Query: 361 PSTIESLNKTFSNGFDQASKI--KEETEMENKVDAEQTGGSQKESIPTLNRINLESWEGM 420
           P+ I S N T S+     S+   +E   +E K + E     QK S PTL+RINLESWEG 
Sbjct: 361 PNGIHSENMTGSSTSSACSETISEEAIVIEKKPNIEDGSIPQKGSSPTLDRINLESWEGA 420

Query: 421 SKNSSKPENNLLLEIFKAFIAAFVKFWSD 428
           SK S++PE N  L   KAF+A FVKFWS+
Sbjct: 421 SKKSTEPETNPFLAFIKAFVAGFVKFWSE 444

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BLAST of Lsi08G006740 vs. TrEMBL
Match: A0A151T0Z8_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_023068 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.3e-69
Identity = 190/455 (41.76%), Postives = 263/455 (57.80%), Query Frame = 1


Query: 1   MHAIKGGWTGRPLALAKNNEPEGRKTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT 60
           MH++K GW G+  ALAK+NE +G+KTRIRRSKEERKAMVE FIKKYQESNNG+FPSLN+T
Sbjct: 2   MHSVKSGW-GKTFALAKHNESQGKKTRIRRSKEERKAMVESFIKKYQESNNGNFPSLNIT 61

Query: 61  HKEVGGSFYTVREIVRDIIQENRVLGPGKLLLEEHSTDHLLEENPLHSIAIEPQSPLTVS 120
           HKEVGGSFYTVREIVRDIIQENRVLGP K  LEE + DH  E+NPL SIA +PQ     S
Sbjct: 62  HKEVGGSFYTVREIVRDIIQENRVLGPAKFTLEELNADHFFEQNPLGSIARDPQPLSAAS 121

Query: 121 SKEFYSPVDYYNQYINEESIIVSDEQCTATNIQGSQNGPII----NGSLVDVRDKDSVEF 180
           S E  S  D  +   N + I VSD   T    Q   NG II    NGS V++ +K+S E 
Sbjct: 122 SIENCSENDKLSD-TNSKVISVSDGSYTEAAHQVVDNGHIIRHVLNGSQVNMINKESDEA 181

Query: 181 IKPELLVNEHKKVEEVMKEE---SGMPINHVSPLATDVVVETFPLDSVSWGVNGSDVRSE 240
             PE+ V +   +++ +++E   +  P+  V+ +A D++VETFPL SVS   +G      
Sbjct: 182 AIPEVQVGDPTTLKQNVEQELKAATTPMAKVTAVADDLIVETFPLRSVSRTTDGIKNLGG 241

Query: 241 MLISTSASEKQVSQTIELESDVGLFNI------KASGCVVEKAEKNFAGPL--------- 300
           +  S+++ E  + +T+EL+  VG   +      K    + EK E +    +         
Sbjct: 242 LRDSSNSPENDI-KTVELKQGVGKSELNGIEPSKNLNLLDEKFEDSHGNQILKNIPDTGL 301

Query: 301 --SETKSDLVEVAQIVETSNGSTVKE----GIIYEVGGPELEVCSDNPISV-TFEQGQKS 360
              E   D+ E     E+SN ST++     G    +  P+  V   N I+  T +QG   
Sbjct: 302 DKDENVGDMFE-----ESSNHSTIEHFDHHGFEDHIN-PQARVSHQNTITYGTVKQGHMM 361

Query: 361 SEMKAPNASPSTIESLNKTFSNGFDQASKIKEETEMENKVDAEQTGGSQKESIPTLNRIN 420
              K    + + I +++KT+    +    +K +    ++VD +  G SQ+ S  T++RIN
Sbjct: 362 DGAK----TSTQINNISKTYKPSEEDGGLLKTDI---HRVDGQHGGNSQRSSNTTVDRIN 421

Query: 421 LESWEGMSKNSSKPENNLLLEIFKAFIAAFVKFWS 427
           LESW+G +KNS++ E+N  L + K    AFVKFWS
Sbjct: 422 LESWDGATKNSARRESNPFLAVLKVLADAFVKFWS 440

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BLAST of Lsi08G006740 vs. TrEMBL
Match: A0A061FNJ5_THECC (DNA binding, putative isoform 1 OS=Theobroma cacao GN=TCM_043403 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.0e-68
Identity = 185/446 (41.48%), Postives = 258/446 (57.85%), Query Frame = 1


Query: 1   MHAIKGGWTGRPLALAKNNEPEGRKTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT 60
           MHAIKGGW G+  ALAK NE  G+K+RIRRSKEERKAMVE FI+KYQ+SNNG+FPSLNLT
Sbjct: 1   MHAIKGGWVGQTFALAKCNEQGGKKSRIRRSKEERKAMVESFIRKYQKSNNGNFPSLNLT 60

Query: 61  HKEVGGSFYTVREIVRDIIQENRVLGPGKLLLEEHSTDHLLEENPLHSIAIEPQSPLTVS 120
           HKEVGGSFY +REIVR+IIQEN+VLGP K    E + D  LE+NPL SI+  P++ L + 
Sbjct: 61  HKEVGGSFYIIREIVREIIQENKVLGPAKFTEGEQNIDLFLEQNPLGSISAAPKNSLPIQ 120

Query: 121 SKEFYSP-VDYYNQYINEESIIVSDEQCTATNIQGSQNGPIINGSLVDVRD-KDSVEFIK 180
           S    SP +  +++  N+ S+ VSD     +  +   +G IING+ VDV +  D V  + 
Sbjct: 121 SNG--SPFIPSHHEDANDGSVSVSDGHSMGSVYKTFDSGQIINGNFVDVTNGTDKVAIV- 180

Query: 181 PELLVNEHKKVEEVMKEESGMPINHVSPLATDVVVETFPLDSVSWGVNGSDVRSEMLIST 240
            +L V E  + ++  KE +    + V+ +  DVVVETFPL  V+  ++  D RS      
Sbjct: 181 -DLQVTEPLESDKSGKELAA-ATSKVTQITPDVVVETFPLRPVAKPIDSIDGRSS---EV 240

Query: 241 SASEKQVSQTIELESDVGLFNI----------KASGCVVEKAEKNFAGPLSETKSDLVEV 300
               + + QT  ++ +  L N+          + S    EK  +N    L E  SDL + 
Sbjct: 241 GELNENLDQTETVKVNESLENVSPKLDDINSSEVSNLTDEKEVENLVDLLLEKNSDLADK 300

Query: 301 A-------QIVETSNGSTVKEGIIYEVGGPELEVCSDNPISVTFEQGQKSSEMKAPNASP 360
                    ++E+S+ ST K  I  +  G  LEV   N ++    +  ++   +A NAS 
Sbjct: 301 KVVENISDPLLESSDCSTRKSAIDEDYNGAALEVSCSNVLTSEINEPSQAIVEEAVNASN 360

Query: 361 STIESLNKTFSNGFDQASKIKEETEMENKVDAEQTGGSQKESIPTLNRINLESWEGMSKN 420
                ++ T +      S  +E   +E +VD +    SQK S  TL+RINLESWEG SK+
Sbjct: 361 GMHPKIDGTDTGSCIGESTTQEAVVVEGQVDLQHV-NSQKGSNKTLDRINLESWEGTSKS 420

Query: 421 SSKPENNLLLEIFKAFIAAFVKFWSD 428
           ++K E N L  IFK+FI+AF+KFWS+
Sbjct: 421 AAKSETNPLWAIFKSFISAFLKFWSE 437

[Close]

BLAST of Lsi08G006740 vs. TAIR10
Match: AT3G52170.1 (AT3G52170.1 DNA binding)

HSP 1 Score: 136.3 bits (342), Expect = 4.6e-32
Identity = 72/126 (57.14%), Postives = 96/126 (76.19%), Query Frame = 1


Query: 1   MHAIKGGWTGRPLALAKNNEPEGRKTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT 60
           MH++K    G+  ALAK ++  G++TR R  KEERK +VE FIKK+Q+ NNGSFPSL+LT
Sbjct: 1   MHSLKTTCVGQIFALAKPHDSVGKRTRNRIPKEERKTLVESFIKKHQKLNNGSFPSLSLT 60

Query: 61  HKEVGGSFYTVREIVRDIIQENRVLGPGKLLLEEHSTDHLLEENPLHSIAIEPQSPLTVS 120
           HKEVGGSFYT+REIVR+IIQENRVLGPG LLLE + +  + +++   SI ++P  PL++S
Sbjct: 61  HKEVGGSFYTIREIVREIIQENRVLGPGDLLLEGNGS--VQDQSLSSSILMDPVPPLSLS 120

Query: 121 SKEFYS 127
              F+S
Sbjct: 121 PNGFHS 124

[Close]

BLAST of Lsi08G006740 vs. TAIR10
Match: AT5G58210.3 (AT5G58210.3 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 61.6 bits (148), Expect = 1.4e-09
Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = 1


Query: 29 RRSKEERKAMVEVFIKKYQESNNGSFPSLNLTHKEVGGSFYTVREIVRDIIQE 82
          R SK++R+A+VE F+ +Y+ +N G FPSL+ THK+VGGS+Y    IVRDI QE
Sbjct: 48 RLSKDDRRALVESFVNEYRATNAGRFPSLDATHKQVGGSYY----IVRDIFQE 96

[Close]

BLAST of Lsi08G006740 vs. NCBI nr
Match: gi|659113398|ref|XP_008456554.1| (PREDICTED: uncharacterized protein LOC103496473 isoform X1 [Cucumis melo])

HSP 1 Score: 662.9 bits (1709), Expect = 4.0e-187
Identity = 362/458 (79.04%), Postives = 389/458 (84.93%), Query Frame = 1


Query: 1   MHAIKGGWTGRPLALAKNNEPEGRKTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT 60
           MHAIKGGWTGRPLALAKNNE EGRKTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT
Sbjct: 1   MHAIKGGWTGRPLALAKNNEAEGRKTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT 60

Query: 61  HKEVGGSFYTVREIVRDIIQENRVLGPGKLLLEE-HSTDHLLEENPLHSIAIEPQSPLTV 120
           HKEVGGSFYTVREIVRDIIQENR+LGPGKLLLEE H+TDH L++NPLHSIAIEPQSPLT+
Sbjct: 61  HKEVGGSFYTVREIVRDIIQENRILGPGKLLLEEEHNTDHSLDQNPLHSIAIEPQSPLTL 120

Query: 121 SSKEFYSPVDYYNQYINEESIIVSDEQCTATNIQGSQNGPIINGSLVDVRDKDSVEFIKP 180
           SSKE + P++Y N+YINEE I VSDEQCTATNIQGSQN  IINGSLVDV ++DS EFI+ 
Sbjct: 121 SSKEVHFPLNY-NKYINEEPIFVSDEQCTATNIQGSQNESIINGSLVDVSNEDSDEFIQS 180

Query: 181 ELLVNEHK------------------------------KVEEVMKEESGMPINHVSPLAT 240
           ELLVNEHK                              KVEEV+KEESGMPINHV+PLAT
Sbjct: 181 ELLVNEHKEVEEVVEKESGMPKNHATPLATDVLVNEHNKVEEVVKEESGMPINHVTPLAT 240

Query: 241 DVVVETFPLDSVSWGVNGSDVRSEMLISTSASEKQVSQTIELESDVGLFNIKASGCVVEK 300
           DVVVETFPLD V W VNGSDVRSE+LIST+ASEKQVSQ+IELESDVGL NI AS  VVEK
Sbjct: 241 DVVVETFPLDPVPWDVNGSDVRSEILISTNASEKQVSQSIELESDVGLSNITASDSVVEK 300

Query: 301 AEKNFAGPLSETKSDLVEVAQIVETSNGSTVKEGIIYEVGGPELEVCSDNPISVTFEQGQ 360
           A +NFAGPLSETKSDLVEVAQIVE SNGSTVKEG ++EVGGPELEVCSD PISV FEQGQ
Sbjct: 301 AGENFAGPLSETKSDLVEVAQIVEISNGSTVKEGSMHEVGGPELEVCSDTPISVNFEQGQ 360

Query: 361 KSSEMKAPNASPSTIESLNKTFSNGFDQASKIKEETEMENKVDAEQTGGSQKESIPTLNR 420
           KSS+MK+P AS    E+LNKTFSN FDQASKI    E+ENKVD  QTGGSQKES+PTLNR
Sbjct: 361 KSSKMKSPIAS----ENLNKTFSNDFDQASKI----EIENKVDPGQTGGSQKESVPTLNR 420

Query: 421 INLESWEGMSKNSSKPENNLLLEIFKAFIAAFVKFWSD 428
           INLESWEGMSKNSSKPENN LLEI K+FIAAFVKFWS+
Sbjct: 421 INLESWEGMSKNSSKPENNPLLEIIKSFIAAFVKFWSE 449

[Close]

BLAST of Lsi08G006740 vs. NCBI nr
Match: gi|449442130|ref|XP_004138835.1| (PREDICTED: uncharacterized protein LOC101202832 isoform X1 [Cucumis sativus])

HSP 1 Score: 644.0 bits (1660), Expect = 1.9e-181
Identity = 348/458 (75.98%), Postives = 381/458 (83.19%), Query Frame = 1


Query: 1   MHAIKGGWTGRPLALAKNNEPEGRKTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT 60
           MHAIKGGWTGRPLALAKNNE EGR+TRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT
Sbjct: 1   MHAIKGGWTGRPLALAKNNEAEGRRTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT 60

Query: 61  HKEVGGSFYTVREIVRDIIQENRVLGPGKLLLEEHSTDHLLEENPLHSIAIEPQSPLTVS 120
           HKEVGGSFYTVREIVRDIIQENR+LGPG LLLEEH+ DH LE+NPLHSIAIEP SPLT+S
Sbjct: 61  HKEVGGSFYTVREIVRDIIQENRILGPGNLLLEEHNPDHSLEQNPLHSIAIEPHSPLTLS 120

Query: 121 SKEFYSPVDYYNQYINEESIIVSDEQCTATNIQGSQNGPIINGSLVDVRDKDSVEFIKPE 180
           S E + PV+Y N+YI+EE I VSDEQCTATNIQGSQN  IINGSLVDV ++DS EFI+ E
Sbjct: 121 SNEVHFPVNY-NKYISEEPIFVSDEQCTATNIQGSQNESIINGSLVDVSNEDSDEFIQSE 180

Query: 181 LLVN-------------------------------EHKKVEEVMKEESGMPINHVSPLAT 240
           LLVN                               EH KVEEV+KEESGMPIN+V+PLAT
Sbjct: 181 LLVNGHKEVEEMVEKESGMPKNHVTSLATDVVLVNEHNKVEEVVKEESGMPINYVTPLAT 240

Query: 241 DVVVETFPLDSVSWGVNGSDVRSEMLISTSASEKQVSQTIELESDVGLFNIKASGCVVEK 300
           DVVVETFPLDSV W VNG DVRSE+LISTSASEKQVSQ+IELESDVGLFNI  S CVVEK
Sbjct: 241 DVVVETFPLDSVPWDVNGFDVRSEILISTSASEKQVSQSIELESDVGLFNITTSDCVVEK 300

Query: 301 AEKNFAGPLSETKSDLVEVAQIVETSNGSTVKEGIIYEVGGPELEVCSDNPISVTFEQGQ 360
           AE+N   PL++TKSDLV+ AQIVE SNGSTVKEG I+EVGGPELEVCSD P+SV+FEQGQ
Sbjct: 301 AEENLTEPLTKTKSDLVDEAQIVEISNGSTVKEGSIHEVGGPELEVCSDTPVSVSFEQGQ 360

Query: 361 KSSEMKAPNASPSTIESLNKTFSNGFDQASKIKEETEMENKVDAEQTGGSQKESIPTLNR 420
           KSS+MK+P AS    E+LNKTFSN FDQASKI    E++NKVD  QTGGSQKES+PTLNR
Sbjct: 361 KSSKMKSPIAS----ENLNKTFSNDFDQASKI----EIKNKVDPGQTGGSQKESVPTLNR 420

Query: 421 INLESWEGMSKNSSKPENNLLLEIFKAFIAAFVKFWSD 428
           INL+SWEGMSKNSSKP NN LLEI K+FI AFVKFWS+
Sbjct: 421 INLDSWEGMSKNSSKPGNNPLLEIIKSFITAFVKFWSE 449

[Close]

BLAST of Lsi08G006740 vs. NCBI nr
Match: gi|659113404|ref|XP_008456557.1| (PREDICTED: uncharacterized protein LOC103496473 isoform X2 [Cucumis melo])

HSP 1 Score: 630.6 bits (1625), Expect = 2.2e-177
Identity = 348/458 (75.98%), Postives = 373/458 (81.44%), Query Frame = 1


Query: 1   MHAIKGGWTGRPLALAKNNEPEGRKTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT 60
           MHAIKGGWTGRPLALAKNNE EGRKTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT
Sbjct: 1   MHAIKGGWTGRPLALAKNNEAEGRKTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT 60

Query: 61  HKEVGGSFYTVREIVRDIIQENRVLGPGKLLLEE-HSTDHLLEENPLHSIAIEPQSPLTV 120
           HKEVGGSFYTVREIVRDIIQENR+LGPGKLLLEE H+TDH L++NPLHSIAIEPQSPLT+
Sbjct: 61  HKEVGGSFYTVREIVRDIIQENRILGPGKLLLEEEHNTDHSLDQNPLHSIAIEPQSPLTL 120

Query: 121 SSKEFYSPVDYYNQYINEESIIVSDEQCTATNIQGSQNGPIINGSLVDVRDKDSVEFIKP 180
           SSKE + P++Y N+YINEE I VSDEQCTATNIQGSQN  IINGSLVDV ++DS EFI+ 
Sbjct: 121 SSKEVHFPLNY-NKYINEEPIFVSDEQCTATNIQGSQNESIINGSLVDVSNEDSDEFIQS 180

Query: 181 ELLVNEHK------------------------------KVEEVMKEESGMPINHVSPLAT 240
           ELLVNEHK                              KVEEV+KEESGMPINHV+PLAT
Sbjct: 181 ELLVNEHKEVEEVVEKESGMPKNHATPLATDVLVNEHNKVEEVVKEESGMPINHVTPLAT 240

Query: 241 DVVVETFPLDSVSWGVNGSDVRSEMLISTSASEKQVSQTIELESDVGLFNIKASGCVVEK 300
           DVVVETFPLD V W VNGSDVRSE+LIST+ASEKQVSQ+IELESDVGL NI AS  VVEK
Sbjct: 241 DVVVETFPLDPVPWDVNGSDVRSEILISTNASEKQVSQSIELESDVGLSNITASDSVVEK 300

Query: 301 AEKNFAGPLSETKSDLVEVAQIVETSNGSTVKEGIIYEVGGPELEVCSDNPISVTFEQGQ 360
           A +NFAGPLSETKSDLVEVAQIVE SNGSTVKEG ++EVGGPELEVCSD PISV FEQGQ
Sbjct: 301 AGENFAGPLSETKSDLVEVAQIVEISNGSTVKEGSMHEVGGPELEVCSDTPISVNFEQGQ 360

Query: 361 KSSEMKAPNASPSTIESLNKTFSNGFDQASKIKEETEMENKVDAEQTGGSQKESIPTLNR 420
           KSS+MK                      ASKI    E+ENKVD  QTGGSQKES+PTLNR
Sbjct: 361 KSSKMK----------------------ASKI----EIENKVDPGQTGGSQKESVPTLNR 420

Query: 421 INLESWEGMSKNSSKPENNLLLEIFKAFIAAFVKFWSD 428
           INLESWEGMSKNSSKPENN LLEI K+FIAAFVKFWS+
Sbjct: 421 INLESWEGMSKNSSKPENNPLLEIIKSFIAAFVKFWSE 431

[Close]

BLAST of Lsi08G006740 vs. NCBI nr
Match: gi|778672729|ref|XP_011649859.1| (PREDICTED: uncharacterized protein LOC101202832 isoform X2 [Cucumis sativus])

HSP 1 Score: 611.7 bits (1576), Expect = 1.1e-171
Identity = 334/458 (72.93%), Postives = 365/458 (79.69%), Query Frame = 1


Query: 1   MHAIKGGWTGRPLALAKNNEPEGRKTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT 60
           MHAIKGGWTGRPLALAKNNE EGR+TRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT
Sbjct: 1   MHAIKGGWTGRPLALAKNNEAEGRRTRIRRSKEERKAMVEVFIKKYQESNNGSFPSLNLT 60

Query: 61  HKEVGGSFYTVREIVRDIIQENRVLGPGKLLLEEHSTDHLLEENPLHSIAIEPQSPLTVS 120
           HKEVGGSFYTVREIVRDIIQENR+LGPG LLLEEH+ DH LE+NPLHSIAIEP SPLT+S
Sbjct: 61  HKEVGGSFYTVREIVRDIIQENRILGPGNLLLEEHNPDHSLEQNPLHSIAIEPHSPLTLS 120

Query: 121 SKEFYSPVDYYNQYINEESIIVSDEQCTATNIQGSQNGPIINGSLVDVRDKDSVEFIKPE 180
           S E + PV+Y N+YI+EE I VSDEQCTATNIQGSQN  IINGSLVDV ++DS EFI+ E
Sbjct: 121 SNEVHFPVNY-NKYISEEPIFVSDEQCTATNIQGSQNESIINGSLVDVSNEDSDEFIQSE 180

Query: 181 LLVN-------------------------------EHKKVEEVMKEESGMPINHVSPLAT 240
           LLVN                               EH KVEEV+KEESGMPIN+V+PLAT
Sbjct: 181 LLVNGHKEVEEMVEKESGMPKNHVTSLATDVVLVNEHNKVEEVVKEESGMPINYVTPLAT 240

Query: 241 DVVVETFPLDSVSWGVNGSDVRSEMLISTSASEKQVSQTIELESDVGLFNIKASGCVVEK 300
           DVVVETFPLDSV W VNG DVRSE+LISTSASEKQVSQ+IELESDVGLFNI  S CVVEK
Sbjct: 241 DVVVETFPLDSVPWDVNGFDVRSEILISTSASEKQVSQSIELESDVGLFNITTSDCVVEK 300

Query: 301 AEKNFAGPLSETKSDLVEVAQIVETSNGSTVKEGIIYEVGGPELEVCSDNPISVTFEQGQ 360
           AE+N   PL++TKSDLV+ AQIVE SNGSTVKEG I+EVGGPELEVCSD P+SV+FEQGQ
Sbjct: 301 AEENLTEPLTKTKSDLVDEAQIVEISNGSTVKEGSIHEVGGPELEVCSDTPVSVSFEQGQ 360

Query: 361 KSSEMKAPNASPSTIESLNKTFSNGFDQASKIKEETEMENKVDAEQTGGSQKESIPTLNR 420
           KSS+MKA                      SKI    E++NKVD  QTGGSQKES+PTLNR
Sbjct: 361 KSSKMKA----------------------SKI----EIKNKVDPGQTGGSQKESVPTLNR 420

Query: 421 INLESWEGMSKNSSKPENNLLLEIFKAFIAAFVKFWSD 428
           INL+SWEGMSKNSSKP NN LLEI K+FI AFVKFWS+
Sbjct: 421 INLDSWEGMSKNSSKPGNNPLLEIIKSFITAFVKFWSE 431

[Close]

BLAST of Lsi08G006740 vs. NCBI nr
Match: gi|60498649|dbj|BAD90708.1| (plastid envelope DNA binding protein [Cucumis sativus])

HSP 1 Score: 362.8 bits (930), Expect = 8.6e-97
Identity = 198/279 (70.97%), Postives = 220/279 (78.85%), Query Frame = 1


Query: 64  VGGSFYTVREIVRDIIQENRVLGPGKLLLEEHSTDHLLEENPLHSIAIEPQSPLTVSSKE 123
           VGGSFYTVREIVRDIIQENR+LGPG LLLEEH+ DH LE+NPLHSIAIEP SPLT+SS E
Sbjct: 1   VGGSFYTVREIVRDIIQENRILGPGNLLLEEHNPDHSLEQNPLHSIAIEPHSPLTLSSNE 60

Query: 124 FYSPVDYYNQYINEESIIVSDEQCTATNIQGSQNGPIINGSLVDVRDKDSVEFIKPE--- 183
            + PV+Y N+YI+EE I VSDEQCTATNIQGSQN  IINGSLVDV ++DS EFI+ E   
Sbjct: 61  VHFPVNY-NKYISEEPIFVSDEQCTATNIQGSQNESIINGSLVDVSNEDSDEFIQSELLV 120

Query: 184 ----------------------------LLVNEHKKVEEVMKEESGMPINHVSPLATDVV 243
                                       +LVNEH KVEEV+KEESGMPIN+V+PLATDVV
Sbjct: 121 NGHKEVEEMVEKESGMPKNHVTSLATDVVLVNEHNKVEEVVKEESGMPINYVTPLATDVV 180

Query: 244 VETFPLDSVSWGVNGSDVRSEMLISTSASEKQVSQTIELESDVGLFNIKASGCVVEKAEK 303
           VETFPLDSV W VNG DVRSE+LISTSASEKQVSQ+IELESDVGLFNI  S CVVEKAE+
Sbjct: 181 VETFPLDSVPWDVNGFDVRSEILISTSASEKQVSQSIELESDVGLFNITTSDCVVEKAEE 240

Query: 304 NFAGPLSETKSDLVEVAQIVETSNGSTVKEGIIYEVGGP 312
           N   PL++TKSDLV+ AQIVE SNGSTVKEG I+EVGGP
Sbjct: 241 NLTEPLTKTKSDLVDEAQIVEISNGSTVKEGSIHEVGGP 278

The following BLAST results are available for this feature:

BLAST of Lsi08G006740 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi08G006740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LML9_CUCSA	1.3e-181	75.98	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G384970 PE=4 SV=1	[more]
Q5DW97_CUCSA	6.0e-97	70.97	Plastid envelope DNA binding protein (Fragment) OS=Cucumis sativus GN=PEND PE=4 ...	[more]
F6H824_VITVI	8.7e-72	44.99	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0250g00040 PE=4 SV=...	[more]
A0A151T0Z8_CAJCA	5.3e-69	41.76	Uncharacterized protein OS=Cajanus cajan GN=KK1_023068 PE=4 SV=1	[more]
A0A061FNJ5_THECC	2.0e-68	41.48	DNA binding, putative isoform 1 OS=Theobroma cacao GN=TCM_043403 PE=4 SV=1	[more]

BLAST of Lsi08G006740 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G52170.1	4.6e-32	57.14	DNA binding	[more]
AT5G58210.3	1.4e-09	56.60	hydroxyproline-rich glycoprotein family protein	[more]

BLAST of Lsi08G006740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659113398\|ref\|XP_008456554.1\|	4.0e-187	79.04	PREDICTED: uncharacterized protein LOC103496473 isoform X1 [Cucumis melo]	[more]
gi\|449442130\|ref\|XP_004138835.1\|	1.9e-181	75.98	PREDICTED: uncharacterized protein LOC101202832 isoform X1 [Cucumis sativus]	[more]
gi\|659113404\|ref\|XP_008456557.1\|	2.2e-177	75.98	PREDICTED: uncharacterized protein LOC103496473 isoform X2 [Cucumis melo]	[more]
gi\|778672729\|ref\|XP_011649859.1\|	1.1e-171	72.93	PREDICTED: uncharacterized protein LOC101202832 isoform X2 [Cucumis sativus]	[more]
gi\|60498649\|dbj\|BAD90708.1\|	8.6e-97	70.97	plastid envelope DNA binding protein [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G006740.1	Lsi08G006740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34568	FAMILY NOT NAMED	coord: 1..428 score: 3.4
None	No IPR available	PANTHER	PTHR34568:SF2	DNA BINDING PROTEIN	coord: 1..428 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi08G006740	Csa2G384970	Cucumber (Chinese Long) v2	culsiB145
Lsi08G006740	CSPI02G24210	Wild cucumber (PI 183967)	cpilsiB144
Lsi08G006740	Cucsa.163120	Cucumber (Gy14) v1	cgylsiB269
Lsi08G006740	CmaCh04G025400	Cucurbita maxima (Rimu)	cmalsiB703
Lsi08G006740	CmaCh15G004920	Cucurbita maxima (Rimu)	cmalsiB294
Lsi08G006740	CmoCh04G026590	Cucurbita moschata (Rifu)	cmolsiB697
Lsi08G006740	CmoCh15G005010	Cucurbita moschata (Rifu)	cmolsiB282
Lsi08G006740	Cla013725	Watermelon (97103) v1	lsiwmB475
Lsi08G006740	MELO3C019853	Melon (DHL92) v3.5.1	lsimeB470
Lsi08G006740	ClCG08G007950	Watermelon (Charleston Gray)	lsiwcgB443
Lsi08G006740	MELO3C019853.2	Melon (DHL92) v3.6.1	lsimedB490
Lsi08G006740	Cla97C08G150710	Watermelon (97103) v2	lsiwmbB448
Lsi08G006740	Bhi04G001041	Wax gourd	lsiwgoB594
Lsi08G006740	CsGy2G024010	Cucumber (Gy14) v2	cgyblsiB132
Lsi08G006740	Carg04595	Silver-seed gourd	carlsiB628
Lsi08G006740	Carg02435	Silver-seed gourd	carlsiB243
Lsi08G006740	CsaV3_2G032770	Cucumber (Chinese Long) v3	cuclsiB157

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi08G006740	Bottle gourd (USVL1VR-Ls)	lsilsiB134
Lsi08G006740	Bottle gourd (USVL1VR-Ls)	lsilsiB152
Lsi08G006740	Cucumber (Gy14) v1	cgylsiB498
Lsi08G006740	Cucurbita maxima (Rimu)	cmalsiB293
Lsi08G006740	Cucurbita maxima (Rimu)	cmalsiB706
Lsi08G006740	Cucurbita moschata (Rifu)	cmolsiB281
Lsi08G006740	Cucurbita moschata (Rifu)	cmolsiB700
Lsi08G006740	Cucurbita pepo (Zucchini)	cpelsiB161
Lsi08G006740	Cucurbita pepo (Zucchini)	cpelsiB382
Lsi08G006740	Cucurbita pepo (Zucchini)	cpelsiB384
Lsi08G006740	Wild cucumber (PI 183967)	cpilsiB393
Lsi08G006740	Cucumber (Chinese Long) v2	culsiB389
Lsi08G006740	Melon (DHL92) v3.5.1	lsimeB463
Lsi08G006740	Watermelon (Charleston Gray)	lsiwcgB435
Lsi08G006740	Watermelon (97103) v1	lsiwmB464
Lsi08G006740	Watermelon (97103) v1	lsiwmB485
Lsi08G006740	Cucumber (Gy14) v2	cgyblsiB354
Lsi08G006740	Melon (DHL92) v3.6.1	lsimedB482
Lsi08G006740	Silver-seed gourd	carlsiB769
Lsi08G006740	Cucumber (Chinese Long) v3	cuclsiB412
Lsi08G006740	Watermelon (97103) v2	lsiwmbB426
Lsi08G006740	Watermelon (97103) v2	lsiwmbB439
Lsi08G006740	Wax gourd	lsiwgoB618