Lsi08G001740 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi08G001740
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Gibberellin receptor 1b
Location	chr08 : 3585190 .. 3585522 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAAACTTGGAACAGGCAGATTGGTTTTGGAAGGCATTTTTGCCAAAATGGTCAGACAGAAACCACCCAGCGGCGCATGTGTTCGGTCCTGGTGCCGGAGACATCTCCGGCGTGAAGTTTCCAGCGACACTTCTGATCGTGGGAGGACAGGACCAGCTACTAGATTGGGGGAAAAAGTACTACGAGTGGCTGAAAGAGAGTGGCAAAGAAGTTGATTTGGTTGAATATCCAAATGCCATCCATGGATTTTATTTAGTTCCTCAGCTGAAGGATGCTTCATTGTTAATCAAAGATGTGAGTGATTTCATACACAAACTTATGGCAGTGTAA

mRNA sequence

ATGTTAAACTTGGAACAGGCAGATTGGTTTTGGAAGGCATTTTTGCCAAAATGGTCAGACAGAAACCACCCAGCGGCGCATGTGTTCGGTCCTGGTGCCGGAGACATCTCCGGCGTGAAGTTTCCAGCGACACTTCTGATCGTGGGAGGACAGGACCAGCTACTAGATTGGGGGAAAAAGTACTACGAGTGGCTGAAAGAGAGTGGCAAAGAAGTTGATTTGGTTGAATATCCAAATGCCATCCATGGATTTTATTTAGTTCCTCAGCTGAAGGATGCTTCATTGTTAATCAAAGATGTGAGTGATTTCATACACAAACTTATGGCAGTGTAA

Coding sequence (CDS)

ATGTTAAACTTGGAACAGGCAGATTGGTTTTGGAAGGCATTTTTGCCAAAATGGTCAGACAGAAACCACCCAGCGGCGCATGTGTTCGGTCCTGGTGCCGGAGACATCTCCGGCGTGAAGTTTCCAGCGACACTTCTGATCGTGGGAGGACAGGACCAGCTACTAGATTGGGGGAAAAAGTACTACGAGTGGCTGAAAGAGAGTGGCAAAGAAGTTGATTTGGTTGAATATCCAAATGCCATCCATGGATTTTATTTAGTTCCTCAGCTGAAGGATGCTTCATTGTTAATCAAAGATGTGAGTGATTTCATACACAAACTTATGGCAGTGTAA

Protein sequence

MLNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGDISGVKFPATLLIVGGQDQLLDWGKKYYEWLKESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIHKLMAV

Homology

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BLAST of Lsi08G001740 vs. Swiss-Prot
Match: CXE18_ARATH (Probable carboxylesterase 18 OS=Arabidopsis thaliana GN=CXE18 PE=1 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 2.0e-23
Identity = 48/109 (44.04%), Postives = 71/109 (65.14%), Query Frame = 1


Query: 1   MLNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGDISGVKFPATLLIVGGQDQLLDWGKK 60
           +++ ++ DW WKA      +R+H A +V GP A DISG+ +P T+++V G D L DW + 
Sbjct: 226 LVSPDRTDWCWKAM---GLNRDHEAVNVGGPNAVDISGLDYPETMVVVAGFDPLKDWQRS 285

Query: 61  YYEWLKESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIHKLMA 110
           YYEWLK  GK+  L+EYPN  H FY+ P+L +A  LI  + DF+ + +A
Sbjct: 286 YYEWLKLCGKKATLIEYPNMFHAFYIFPELPEAGQLIMRIKDFVDERVA 331

[Close]

BLAST of Lsi08G001740 vs. Swiss-Prot
Match: GID1B_ARATH (Gibberellin receptor GID1B OS=Arabidopsis thaliana GN=GID1B PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.3e-19
Identity = 39/106 (36.79%), Postives = 66/106 (62.26%), Query Frame = 1


Query: 2   LNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGDISGVKFPATLLIVGGQDQLLDWGKKY 61
           + ++  DW+W+A+LP+  DR+HPA + FGP    + GV FP +L++V G D + DW   Y
Sbjct: 239 VTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAY 298

Query: 62  YEWLKESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIHKL 108
            + LK++G EV+L+    A  GFY +P       L+++++ F+H +
Sbjct: 299 VDGLKKTGLEVNLLYLKQATIGFYFLPNNDHFHCLMEELNKFVHSI 344

[Close]

BLAST of Lsi08G001740 vs. Swiss-Prot
Match: GID1C_ARATH (Gibberellin receptor GID1C OS=Arabidopsis thaliana GN=GID1C PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.2e-19
Identity = 40/104 (38.46%), Postives = 64/104 (61.54%), Query Frame = 1


Query: 2   LNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGDISGVKFPATLLIVGGQDQLLDWGKKY 61
           + +   DW+W+AFLP+  DR HPA   FGP +  + G+ FP +L++V G D + DW  KY
Sbjct: 237 VTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKY 296

Query: 62  YEWLKESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIH 106
            E LK++G+EV L+    A  GFYL+P       ++ +++ F++
Sbjct: 297 AEGLKKAGQEVKLLYLEQATIGFYLLPNNNHFHTVMDEIAAFVN 340

[Close]

BLAST of Lsi08G001740 vs. Swiss-Prot
Match: GID1A_ARATH (Gibberellin receptor GID1A OS=Arabidopsis thaliana GN=GID1A PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 3.8e-19
Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = 1


Query: 2   LNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGDISGVKFPATLLIVGGQDQLLDWGKKY 61
           + +   DW+WKAFLP+  DR HPA + F P    + GV FP +L++V G D + DW   Y
Sbjct: 239 VTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAY 298

Query: 62  YEWLKESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIH 106
            E LK++G+EV L+    A  GFYL+P       ++ ++S F++
Sbjct: 299 AEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVN 342

[Close]

BLAST of Lsi08G001740 vs. Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.2e-17
Identity = 40/104 (38.46%), Postives = 64/104 (61.54%), Query Frame = 1


Query: 2   LNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGDISGVKFPATLLIVGGQDQLLDWGKKY 61
           + L+  DW+WKA+LP+ +DR+HPA + FGP    + G+ F  +L+IV G D   D    Y
Sbjct: 246 VTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAY 305

Query: 62  YEWLKESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIH 106
            + L+E G  V +V+  NA  GFYL+P       +++++SDF++
Sbjct: 306 ADALREDGHHVKVVQCENATVGFYLLPNTVHYHEVMEEISDFLN 349

[Close]

BLAST of Lsi08G001740 vs. TrEMBL
Match: A0A0A0KUP0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G647320 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 5.7e-46
Identity = 89/110 (80.91%), Postives = 99/110 (90.00%), Query Frame = 1


Query: 1   MLNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGD-ISGVKFPATLLIVGGQDQLLDWGK 60
           MLNLEQADW+WKAFLPK  DRNHPA HVFGP  GD IS VKFP TLLI+GG+DQL DWGK
Sbjct: 223 MLNLEQADWYWKAFLPKGCDRNHPAVHVFGPSGGDEISKVKFPTTLLILGGKDQLGDWGK 282

Query: 61  KYYEWLK-ESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIHKLM 109
           KYYEWLK E GKEVDLVEYPNAIHGFY+VP+LKD+SLLIKD++DFIHK++
Sbjct: 283 KYYEWLKDECGKEVDLVEYPNAIHGFYVVPELKDSSLLIKDMNDFIHKII 332

[Close]

BLAST of Lsi08G001740 vs. TrEMBL
Match: A0A0A0LUJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G466560 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 9.1e-36
Identity = 69/106 (65.09%), Postives = 86/106 (81.13%), Query Frame = 1


Query: 2   LNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGDISGVKFPATLLIVGGQDQLLDWGKKY 61
           LNLE+ADW+WKAFLP  ++RNH AAHVFG     ISGVK PATL+IVGG DQL DW +KY
Sbjct: 227 LNLERADWYWKAFLPDGANRNHVAAHVFGEKGVKISGVKLPATLVIVGGSDQLRDWDRKY 286

Query: 62  YEWLKESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIHKL 108
           YEWLK+ GKEV++VEY NAIHGFY +P+L + SLLI++  +FI ++
Sbjct: 287 YEWLKKGGKEVEMVEYANAIHGFYAIPELPETSLLIEEAKNFIGRI 332

[Close]

BLAST of Lsi08G001740 vs. TrEMBL
Match: A5Y726_CUCME (Esterase OS=Cucumis melo PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.2e-35
Identity = 69/106 (65.09%), Postives = 87/106 (82.08%), Query Frame = 1


Query: 2   LNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGDISGVKFPATLLIVGGQDQLLDWGKKY 61
           LNLE+ADW+WKAFLP  ++RNH AAHVFG    +IS VKFPATL+IVGG DQL DW +KY
Sbjct: 226 LNLERADWYWKAFLPDGANRNHGAAHVFGEDGVNISAVKFPATLVIVGGSDQLRDWDRKY 285

Query: 62  YEWLKESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIHKL 108
           YEWLK++GKEV+LVEYP AIHGFY++ +L +  LLI++  +FI K+
Sbjct: 286 YEWLKKAGKEVELVEYPKAIHGFYVISELPETWLLIEEAKNFIEKV 331

[Close]

BLAST of Lsi08G001740 vs. TrEMBL
Match: U5FF60_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s02210g PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 8.5e-34
Identity = 67/106 (63.21%), Postives = 82/106 (77.36%), Query Frame = 1


Query: 1   MLNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGDISGVKFPATLLIVGGQDQLLDWGKK 60
           ++++E+ DW WKAFLP+ SDRNH   +VFGP A DISGVKFPATLL VGG D L DW K+
Sbjct: 222 LISVERTDWMWKAFLPEGSDRNHSVVNVFGPNAVDISGVKFPATLLFVGGFDPLQDWQKR 281

Query: 61  YYEWLKESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIHK 107
           Y+E LK+SGKEV LVEYPN  HGFY +P+  + SLLI +V  F+HK
Sbjct: 282 YHEGLKKSGKEVHLVEYPNVFHGFYCLPESPEFSLLIGEVKSFVHK 327

[Close]

BLAST of Lsi08G001740 vs. TrEMBL
Match: A0A067KH62_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14825 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 2.5e-33
Identity = 67/108 (62.04%), Postives = 83/108 (76.85%), Query Frame = 1


Query: 2   LNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGDISGVKFPATLLIVGGQDQLLDWGKKY 61
           L+L++ADW+WKAFLP+ +DRNHPA +VFGP   DIS + FPATL+ VGG D L DW  KY
Sbjct: 227 LSLDRADWYWKAFLPEEADRNHPAVNVFGPNGADISELHFPATLVCVGGFDILQDWQMKY 286

Query: 62  YEWLKESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIHKLMA 110
           YEWLK+ GKEV LVEYPN IHGFY + +L ++SLLI ++  FI K  A
Sbjct: 287 YEWLKKCGKEVYLVEYPNVIHGFYCMSELPESSLLISEIRTFIRKQTA 334

[Close]

BLAST of Lsi08G001740 vs. TAIR10
Match: AT5G23530.1 (AT5G23530.1 carboxyesterase 18)

HSP 1 Score: 109.8 bits (273), Expect = 1.1e-24
Identity = 48/109 (44.04%), Postives = 71/109 (65.14%), Query Frame = 1


Query: 1   MLNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGDISGVKFPATLLIVGGQDQLLDWGKK 60
           +++ ++ DW WKA      +R+H A +V GP A DISG+ +P T+++V G D L DW + 
Sbjct: 226 LVSPDRTDWCWKAM---GLNRDHEAVNVGGPNAVDISGLDYPETMVVVAGFDPLKDWQRS 285

Query: 61  YYEWLKESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIHKLMA 110
           YYEWLK  GK+  L+EYPN  H FY+ P+L +A  LI  + DF+ + +A
Sbjct: 286 YYEWLKLCGKKATLIEYPNMFHAFYIFPELPEAGQLIMRIKDFVDERVA 331

[Close]

BLAST of Lsi08G001740 vs. TAIR10
Match: AT3G63010.1 (AT3G63010.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 97.1 bits (240), Expect = 7.4e-21
Identity = 39/106 (36.79%), Postives = 66/106 (62.26%), Query Frame = 1


Query: 2   LNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGDISGVKFPATLLIVGGQDQLLDWGKKY 61
           + ++  DW+W+A+LP+  DR+HPA + FGP    + GV FP +L++V G D + DW   Y
Sbjct: 239 VTIQDRDWYWRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAY 298

Query: 62  YEWLKESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIHKL 108
            + LK++G EV+L+    A  GFY +P       L+++++ F+H +
Sbjct: 299 VDGLKKTGLEVNLLYLKQATIGFYFLPNNDHFHCLMEELNKFVHSI 344

[Close]

BLAST of Lsi08G001740 vs. TAIR10
Match: AT5G27320.1 (AT5G27320.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 96.3 bits (238), Expect = 1.3e-20
Identity = 40/104 (38.46%), Postives = 64/104 (61.54%), Query Frame = 1


Query: 2   LNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGDISGVKFPATLLIVGGQDQLLDWGKKY 61
           + +   DW+W+AFLP+  DR HPA   FGP +  + G+ FP +L++V G D + DW  KY
Sbjct: 237 VTVRDRDWYWRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKY 296

Query: 62  YEWLKESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIH 106
            E LK++G+EV L+    A  GFYL+P       ++ +++ F++
Sbjct: 297 AEGLKKAGQEVKLLYLEQATIGFYLLPNNNHFHTVMDEIAAFVN 340

[Close]

BLAST of Lsi08G001740 vs. TAIR10
Match: AT3G05120.1 (AT3G05120.1 alpha/beta-Hydrolases superfamily protein)

HSP 1 Score: 95.5 bits (236), Expect = 2.2e-20
Identity = 41/104 (39.42%), Postives = 62/104 (59.62%), Query Frame = 1


Query: 2   LNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGDISGVKFPATLLIVGGQDQLLDWGKKY 61
           + +   DW+WKAFLP+  DR HPA + F P    + GV FP +L++V G D + DW   Y
Sbjct: 239 VTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAY 298

Query: 62  YEWLKESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIH 106
            E LK++G+EV L+    A  GFYL+P       ++ ++S F++
Sbjct: 299 AEGLKKAGQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFVN 342

[Close]

BLAST of Lsi08G001740 vs. NCBI nr
Match: gi|659119171|ref|XP_008459512.1| (PREDICTED: probable carboxylesterase 18 [Cucumis melo])

HSP 1 Score: 196.1 bits (497), Expect = 3.3e-47
Identity = 90/110 (81.82%), Postives = 103/110 (93.64%), Query Frame = 1


Query: 1   MLNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGD-ISGVKFPATLLIVGGQDQLLDWGK 60
           MLNL+Q+DW+WKAFLPK  DRNHPAAHVFGPGAGD IS VKFP TLLI+GG+DQL+DWGK
Sbjct: 221 MLNLKQSDWYWKAFLPKGCDRNHPAAHVFGPGAGDDISKVKFPTTLLILGGKDQLVDWGK 280

Query: 61  KYYEWLK-ESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIHKLM 109
           +YYEWLK E GKEVDLVEYPNAIHGFY+VP+LKD+SLLIKD++DFIHKL+
Sbjct: 281 RYYEWLKDECGKEVDLVEYPNAIHGFYIVPELKDSSLLIKDMNDFIHKLI 330

[Close]

BLAST of Lsi08G001740 vs. NCBI nr
Match: gi|449447535|ref|XP_004141523.1| (PREDICTED: probable carboxylesterase 18 isoform X2 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 8.2e-46
Identity = 89/110 (80.91%), Postives = 99/110 (90.00%), Query Frame = 1


Query: 1   MLNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGD-ISGVKFPATLLIVGGQDQLLDWGK 60
           MLNLEQADW+WKAFLPK  DRNHPA HVFGP  GD IS VKFP TLLI+GG+DQL DWGK
Sbjct: 223 MLNLEQADWYWKAFLPKGCDRNHPAVHVFGPSGGDEISKVKFPTTLLILGGKDQLGDWGK 282

Query: 61  KYYEWLK-ESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIHKLM 109
           KYYEWLK E GKEVDLVEYPNAIHGFY+VP+LKD+SLLIKD++DFIHK++
Sbjct: 283 KYYEWLKDECGKEVDLVEYPNAIHGFYVVPELKDSSLLIKDMNDFIHKII 332

[Close]

BLAST of Lsi08G001740 vs. NCBI nr
Match: gi|778707738|ref|XP_011656048.1| (PREDICTED: probable carboxylesterase 18 isoform X1 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 8.2e-46
Identity = 89/110 (80.91%), Postives = 99/110 (90.00%), Query Frame = 1


Query: 1   MLNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGD-ISGVKFPATLLIVGGQDQLLDWGK 60
           MLNLEQADW+WKAFLPK  DRNHPA HVFGP  GD IS VKFP TLLI+GG+DQL DWGK
Sbjct: 225 MLNLEQADWYWKAFLPKGCDRNHPAVHVFGPSGGDEISKVKFPTTLLILGGKDQLGDWGK 284

Query: 61  KYYEWLK-ESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIHKLM 109
           KYYEWLK E GKEVDLVEYPNAIHGFY+VP+LKD+SLLIKD++DFIHK++
Sbjct: 285 KYYEWLKDECGKEVDLVEYPNAIHGFYVVPELKDSSLLIKDMNDFIHKII 334

[Close]

BLAST of Lsi08G001740 vs. NCBI nr
Match: gi|659119173|ref|XP_008459513.1| (PREDICTED: probable carboxylesterase 18 [Cucumis melo])

HSP 1 Score: 166.0 bits (419), Expect = 3.7e-38
Identity = 77/108 (71.30%), Postives = 84/108 (77.78%), Query Frame = 1


Query: 2   LNLEQADWFWKAFLPKWSDRNHPAAHVFGP-GAGDISGVKFPATLLIVGGQDQLLDWGKK 61
           L LE+ DW WKAFLP  S RNHPAAHVFG  G  D S   FP TLLIVGG+D L DW ++
Sbjct: 231 LTLEETDWSWKAFLPNGSSRNHPAAHVFGASGVRDTSSATFPPTLLIVGGRDPLRDWERR 290

Query: 62  YYEWLKESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIHKLM 109
           YYEWLKE GKEVDLVEYPNAIHGFY VP+LK+ SLLIKD  DF+HK M
Sbjct: 291 YYEWLKEGGKEVDLVEYPNAIHGFYAVPELKECSLLIKDAIDFMHKHM 338

[Close]

BLAST of Lsi08G001740 vs. NCBI nr
Match: gi|778730917|ref|XP_011659884.1| (PREDICTED: probable carboxylesterase 18 [Cucumis sativus])

HSP 1 Score: 159.8 bits (403), Expect = 2.6e-36
Identity = 70/106 (66.04%), Postives = 87/106 (82.08%), Query Frame = 1


Query: 2   LNLEQADWFWKAFLPKWSDRNHPAAHVFGPGAGDISGVKFPATLLIVGGQDQLLDWGKKY 61
           LNLE+ADW+WKAFLP  ++RNH AAHVFG     ISGVKFPATL+IVGG DQL DW +KY
Sbjct: 227 LNLERADWYWKAFLPDGANRNHVAAHVFGEKGVKISGVKFPATLVIVGGSDQLRDWDRKY 286

Query: 62  YEWLKESGKEVDLVEYPNAIHGFYLVPQLKDASLLIKDVSDFIHKL 108
           YEWLK+ GKEV++VEY NAIHGFY +P+L + SLLI++  +FI ++
Sbjct: 287 YEWLKKGGKEVEMVEYANAIHGFYAIPELPETSLLIEEAKNFIGRI 332

The following BLAST results are available for this feature:

BLAST of Lsi08G001740 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CXE18_ARATH	2.0e-23	44.04	Probable carboxylesterase 18 OS=Arabidopsis thaliana GN=CXE18 PE=1 SV=1	[more]
GID1B_ARATH	1.3e-19	36.79	Gibberellin receptor GID1B OS=Arabidopsis thaliana GN=GID1B PE=1 SV=1	[more]
GID1C_ARATH	2.2e-19	38.46	Gibberellin receptor GID1C OS=Arabidopsis thaliana GN=GID1C PE=1 SV=1	[more]
GID1A_ARATH	3.8e-19	39.42	Gibberellin receptor GID1A OS=Arabidopsis thaliana GN=GID1A PE=1 SV=1	[more]
GID1_ORYSJ	1.2e-17	38.46	Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1	[more]

BLAST of Lsi08G001740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUP0_CUCSA	5.7e-46	80.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G647320 PE=4 SV=1	[more]
A0A0A0LUJ2_CUCSA	9.1e-36	65.09	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G466560 PE=4 SV=1	[more]
A5Y726_CUCME	1.2e-35	65.09	Esterase OS=Cucumis melo PE=4 SV=1	[more]
U5FF60_POPTR	8.5e-34	63.21	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s02210g PE=4 SV=1	[more]
A0A067KH62_JATCU	2.5e-33	62.04	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14825 PE=4 SV=1	[more]

BLAST of Lsi08G001740 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23530.1	1.1e-24	44.04	carboxyesterase 18	[more]
AT3G63010.1	7.4e-21	36.79	alpha/beta-Hydrolases superfamily protein	[more]
AT5G27320.1	1.3e-20	38.46	alpha/beta-Hydrolases superfamily protein	[more]
AT3G05120.1	2.2e-20	39.42	alpha/beta-Hydrolases superfamily protein	[more]

BLAST of Lsi08G001740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659119171\|ref\|XP_008459512.1\|	3.3e-47	81.82	PREDICTED: probable carboxylesterase 18 [Cucumis melo]	[more]
gi\|449447535\|ref\|XP_004141523.1\|	8.2e-46	80.91	PREDICTED: probable carboxylesterase 18 isoform X2 [Cucumis sativus]	[more]
gi\|778707738\|ref\|XP_011656048.1\|	8.2e-46	80.91	PREDICTED: probable carboxylesterase 18 isoform X1 [Cucumis sativus]	[more]
gi\|659119173\|ref\|XP_008459513.1\|	3.7e-38	71.30	PREDICTED: probable carboxylesterase 18 [Cucumis melo]	[more]
gi\|778730917\|ref\|XP_011659884.1\|	2.6e-36	66.04	PREDICTED: probable carboxylesterase 18 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR013094	AB_hydrolase_3

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G001740.1	Lsi08G001740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013094	Alpha/beta hydrolase fold-3	PFAM	PF07859	Abhydrolase_3	coord: 2..85 score: 4.0
None	No IPR available	PANTHER	PTHR23024	MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES	coord: 1..109 score: 1.0
None	No IPR available	PANTHER	PTHR23024:SF174	SUBFAMILY NOT NAMED	coord: 1..109 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi08G001740	Wax gourd	lsiwgoB586
Lsi08G001740	Cucumber (Gy14) v1	cgylsiB389
Lsi08G001740	Cucurbita maxima (Rimu)	cmalsiB035
Lsi08G001740	Cucurbita maxima (Rimu)	cmalsiB453
Lsi08G001740	Cucurbita moschata (Rifu)	cmolsiB026
Lsi08G001740	Cucurbita moschata (Rifu)	cmolsiB440
Lsi08G001740	Cucurbita pepo (Zucchini)	cpelsiB479
Lsi08G001740	Cucurbita pepo (Zucchini)	cpelsiB650
Lsi08G001740	Wild cucumber (PI 183967)	cpilsiB395
Lsi08G001740	Cucumber (Chinese Long) v2	culsiB391
Lsi08G001740	Melon (DHL92) v3.5.1	lsimeB461
Lsi08G001740	Watermelon (Charleston Gray)	lsiwcgB440
Lsi08G001740	Watermelon (97103) v1	lsiwmB467
Lsi08G001740	Cucumber (Gy14) v2	cgyblsiB358
Lsi08G001740	Melon (DHL92) v3.6.1	lsimedB479
Lsi08G001740	Silver-seed gourd	carlsiB023
Lsi08G001740	Cucumber (Chinese Long) v3	cuclsiB414
Lsi08G001740	Watermelon (97103) v2	lsiwmbB445