Lsi08G001630 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi08G001630
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Guanine nucleotide-binding protein beta subunit-like protein
Location	chr08 : 3354215 .. 3365463 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAACCCTACGTTCTCCCTCCCAAACACGCACGTTGCCTCCCCACTCCACACACACGGGCTTCTGTCGCTCTAGCTCCGGCTACCAGGCGACGATCAATCTCTGCGTGAACTCCCTGCGTAACTCCCATAGACGACAGCAACTCCGATTAACCAGCGCCAGAGACTGGACTGAGACTTCGACAGAGACTGCAACTCGACGGTGACGGCGACTCCGGGCGGGGACTTCGACTCTTACTACGACGGCAACGGTGAAGCATACGAAAATCACGACGAGACGACTTCTTTCTCAAACTTCAACCATTTGTTAGTGATCTCGTTTGGGTAAACTTGGTGAGAAAATTTCTGCTTCCCTTAGAACAAAGTATGAGCTGGTTGCTGATTTTTGCTGTTGTTTTGAACTATAAGTTAGTTCTCAACTTGTTGTCTTTAGATATATGAGCTTTCTGATTTTTTTGTTTGTTTTTGTTCTGTAATATTTGAGGTTAGTAGCTTGTTTTTCAGATTTTTTCTTGGTTGCAAAAACTGTTGGTTGAGTTTATTTTGCTCGGCTTCTTGCAAAAACAGTTGTTGGTTGGGTTTATTTTGTAAAAATGAGAAGTGTTCCACATTTATATCTATGTTTTAGGTGATTTAGATAGGGTGTACACATGTTATGAAAGTTTTTCATGTCATTTTAAATGGTGGCTTTTATCTTCCAAGTATCTTGGACTTATATTCCAACATAAAAATTCTAAACCCCTAATTCTAATTCATTTATATGCATGTTTTAGGTGATTTAGATTGGGTGTACACATATTATAAAGCTTTTTAATGTCATTTTAGGAGCTTTCTTTAATCTTCTAGGTGATCTTTAGTATTTCGTAGTAAATAAAATTTAAAACTTTTACCTCTAGTTTCATTGGTACACATTTAGATACATATTTTAGGAGATTTAAAACTTTTACCTTTAGTTTCATTGTGACACATTTAGATACATATTTTAGGAGATTTAGAGTGGGAATACACATAGGTATGGAACTTTTAATGTTTTTCTTCGAGGTGATCTTTTATCTTGTACTTATCTTGCACTTATTTTGCAAGTATCTCGTAGCAAAAAAAATTCTAAACTTTTATCTCTAGTTTCATTGTGGCACATTTAGATACATATTTAGGAGATTTAGAGTGGGAATACACATAAGTATGGAACTTTTAAATTTTTAATGGCTTTCTTCTAGGTGATCTTTTATCTTGCACTTATCTTGCAAGTATCTCGCAATTTTTTTTTTAAACCTTTACCTCTGGTTTCATTGTGACATATTGTATACATATTTTAGGAGATTTAGGGTGGGAATAGACACATATATGAAAGTTTTAATGTATTTCTTCTAAGTGATATTTTATCTTACATTTATCTTGTAAGTATCTTGCAGGAAAAAGAAAAAAATTATAAACTTTTACCTCTAGTTTCATTGTGGCACATTTAGATGCATACTCTTGGAGATTTAGAGTGAGAAAACTGAATACACACGACAAACAATACGATAAACAGTCAATGCTTTTCATTACAAACATTCACTGTGTTTCATACACATTCAATAAGAACGAAAATAACTAAAGTGTTCAACAAAAAATCTTTTCCATTAATCTTGTACAATTGACTTCTCATTGTATGCAATACAATTGATGTCTTCATTTGTCATCCAATGCTTCATCATAACCAACTAAATTTAGGGGTGATGATTGGTCGATCGGTGTCGGTTTTGGGCTCATAGTAAAAAAAAGAAAAGAGAGGAAAAGAATCAGTAAGTAAAAGTATAGAACTCTTCAGTTTTGCATCTTCTTCCTTCAACATTTCTTTGTACTCTCTTTCTAAGTCCTCCTGGTGGCACTCCACCCCCAACTTTGATCACCCTTATGCATTCTGCCCTTTGCCCACTGCCGCTCTGTCTCAAATCACACTTTACTTTAGCCAACATACGATGCTTTTCTCTCCAGTTGCCGCTAACTATTATTTTTTATTTTGTTTGTTTGCTCCGTTGGTGCCAATAATAAATCATAAATCAGTAGAAGGAATGTTTAAGGATTTACATCTCTTTCTATCTTCTTTGTTTTGCAGTAAAGATGCCGAAGAAGAAAATCTCGGCCCCTCCTAAAGGCGCAAAGAAGGGGAAGAATTTTCCACTCAGTAAGGACCCTTTCTTCAGTTCTGAATCAAGGAAACGAAGGAAGATTGTTGATGATGAGATTGAGAGCGGTGAGTCAGACGAGGATAATGCGTTAGTGGGCGTTGAGGATGAGGAGTTTGAGGAAGAAACTGTTGACGAGAAAAGGAAGAGAGTAGCAATCGAGTACTTGGAGAAAATTCGGGAAATTGCGAAAAGAGAAAAGGAGAGGGAGGATGAAGAGAAGGATGAGGATGAGAGTGGTGACGAAGGCGAAAAAGATTCACTTGTTGCACAAATTCTTCAGCAAGAGCAACTCGAAGATAGTGGAAGGCTTCGGAGAGAAATTGCATCAAGGTGTTGTTTTCTATTGGTTTAATTTTTTTTTGGAATTTTTTATTTGTATTTTTGCTGATTTACATTGTTTATATTCCCCTTTTTTTTCCAAATTCATAGCACTTCACCTCTCTCCCTCACTTACACACGCTTACACAATTTTTTTTTTTCTCTCATGTAGTTTAGGTAATTCTTTTTTGAAATGGAAACAATACTTTTCATTGATATAATGAAAAGATTCTAGTGCTCCAAAATACAAGATACCAAGAACAAAAAAAGTAACGAAGATACATATCAAGTAATACAAAGGCATAGAAACATAAATTAAGCTGAATTCAGTATTTTAAAAAGCCCTTTCGGGCGCGTGCCTAGGCTCAAGGCGCAGGTCTGGTGCGCGCCTTTTGTGAAGCCCCAAGGCTCAAAGCCTTGAGCCTTGGGGCTTTTTCATTGTTTTAAAAAAATTGTAATAATTAAGGGTTTTCCTTCTTTATTAACTAAACGAATCAAGTTTACTAAGTCTAAATACAAAATTTCTTGTGTTTAGGGTTTTTTTTCTTCCATATTTCCACTTCAACTATGCTTTCTCTTTTTAATGTAATATTTTTATATATAGTGCGGCTCACAAAAAAAAAAAAAGCCAGTGTCTTTTTGTATGCCTTGCGCCTAGGCTCCAGAGGGCCATTGCGCTTTAGTGGGTTTTGAGCATTTAAAACACTGGCTGAATTAATGAAAGCATTCCAGTTCAAACAAATGTCTTGAATGGAATAATTGACAAAAGTTTTAGATTGAGAACACCATCATGAAGGAAGAAGACATGTTGAACCCAACTAATCTGTCCAATCAAGCAGTTTGTCATGGAAAACCCCTGATTACGTTCGAATCAAATCTCAGATAGACGGATGTTAAGCTGAAAACCATCTGCTTATATGATTCTTTTTTTCTTTTTTCTCAATCGAACTCCATGTTGTTCTCTTGATTACAACAACACGTTTTTGTTTTAATAAGTTCATATAATTTTTTAAGTAACTTTCTTTAAGAACCAGGAAATATGTCCAAATAACAGTGGGATGTCAGGCACATTCTTGTGCTATTTGTTCAAGAAGAAAGGTTGAGGTGTACTTGTTATACTCATTATAGGTGGCTAATGTTTACTTGTGTGTTTGCTTCACTCACTGTAAGTTTATAAAGAATTTTGGAGAGCATGTTCCTATGATATGCTTGTTTCTTAAACCCACTGTATGTGAGGGAAAAAAAAGGAGAGGCAAAGGAAAAATGTGAAAAACAACTTAAAAAAATTTATGACGGGTGATGGTGGTGTTAAATTATTAATGATTATACACCTTTCAGGGTTCAGAAGCCAGTAGCTAGAGATGAATTTCAATTCTTGATTAAGCACAGACAATCTGTTACAGCTGTGGCTCTATCTGAGGATGATTTGAAGGGGTTTTCATCGTCAAAGGATGGTACCATCTTACACTGGGATGTAGATAGTGGTAAAGGGGAAAAATATCAATGGCCTAGTGATGAAGTATTGAGATTGCATGGGGCTAAGGATCCCCAAGGTCGGGCGACAAGGCATAGTAAAGTCACTTTATCATTAGCTGTTAGTTCTGATGGTCGATATTTGGCAAGTGGAGGCTTAGACCGCCATGTGCATATATGGGATACTCGTACAAGAGAGCATATTCAGGTAATTGCTATTTATTGCTATAGCTTATTGCTTATTGTTACATTTCATGGCATGGTTGAAAACTCTTGAGATTAAATCTAAACCTAAAATAATTTGGGTTGGGTTAGTGTGGAATAAATATATGAGCCTTTTGAAATTATCCTTCTTTTGTTGTTGTATTCAATTGGGGATTTATTTTAGTTTTTTCTAATTTTAAATTTAACAGCCATTTTTATTGATATAAAGAAAAGAGATAGATGAAAAGCCCACATAAGCCAAAGAAGCTGCAAAAAGATCCTCCAAATGATCTAATAGAGGATATGTTTTAGTTGAGAAGAATACTGAGAAATTGTGGACAATGTTATCCCAAATTCTGTCTATCCCTTCTTAATTACTTTGATTAGGAAGCTTCCCTCTTCCACCTTTATGAAACCTACCCAAAAGAAAAATGAAGCGGAAAGCTTGACAAAAAATAAAGTATTATAGCTGTCGAAAGCTTTTCTCATTCATTTTATTGTGGCTTCTTACAGGCATTTCCTGGTCATAGAGGACCTGTTTCGTGTTTGACTTTCAGGCAAGGGACTTCAGAACTTTTTTCTGGTTCATATGATCGAACTGTCAAGATATGGAATGTGGACGACAGAGCTTATATAAATACATTGTTTGGTCACCAAAGCGAAGTATTAACTATTGATTGCCTACGTAAAGAAAGATTACTTACTGTTGGACGTGATCGGAGTATGCAATTATGGAAGGTAGACTCCGTTTTTGAGTACTTGCAGTTTTTAGCAATTCTCTCATTGGACTTACCGCATTTCCCTAATTTAAATTTGTGCAGCATGCTTGTGTTTTCATATACCTGCAATAGTCTTATTTTCCTTTTATTATTTTGACTAATTAATCCTTTTGATGCTTGAAACAGGTTCCAGAGGAGTCTCGTTTAGTATTTCGTGCTCCTGCATCATCCTTAGAATGTTGCTGTTTTATAAGCAATGATGAATTCTTATCTGGATCAGATGACGGCAGTATTGAGCTGTGGACTGCATTAAAAAAGAAGCCTGTTTTTATTGCACAAAATGCTCATCCTTCTTCATCATCTTCCATGAATTTGGAACTAAAGGAAAATGGTGCCGTCCCCAATGGTTGTATGGGTATGAGTTTCTTCAAACATTTTTTTCTCTTCAATCATTCTGCAAATTGTCACTGCATTGGAAATGCTCATTGGTGCTTATTTCTAAGCTTTAATGTTGCCACTAATGCACAAATCAATTCATAGTTGTCACTTGGTCAGTTGGTCTTTCTGTGTTTCCTTACAGGAATGGCTAGTTGTTGGTTTTATCTCTTCTAAATTTTTTCTAATTGTTCACTTTTCCACTAATAAAGAAATTAAAACGGTTGATTTAAGTAAAAAAGAAAGCAATTAATAGCTTTTCTTTTCTATCGATATGATTTTGTATAGCTGGAGTCCCTCCTTGTAGAGAGATTTCCTTTTTGTGGGCTTGATTTTTGTATGCCCGTGTATTCTTTCATTTTTTCTCAATGAAAGCATTTGTTCTTATAAAAAAAAAAAGAAAAAAAGAAAAACAAACAAACAAAAAAATAGCTTTTTCTTTGTGCCAATTATTAGTCAATATATTGTTAAATCGTGATTTTTTTTTTCTTTGCAGGAAATGGGGACAGTTTGTCAGCATACTCTTGGGTAAGTTCAGTCTCAGTATGTAGAAATAGTGACCTTGCTGCATCGGGTGCTGGCAACGGTTCTGTTCGTTTATGGGCTCTCACAAGTGATAAGAAAGATGTGAAACCATTATATGACCTCCCTCTGGTATGCAAGATCCCCATTTATTTTACATTACTAGCTGTTCAATTTTACCTCTTGTTATTGAACTGACTTGAATGTGGCTTATATTGTGCATTCTTTTGTATATCATTGCTTGAATTTGTGCCCTCGCATATCTCCACCTCAACAAGAGCTTTTGGCACCTGCTGAGTTAGGCTTCCTCTTGATATAACCCTATTTCTACTTTCCATATCTTTTGCTTTTGGAAGTACTCAAATAGAAAATTTAAGGGCTTTAAGGACTTCTTCCATACCTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGTTAGTTTAGAGACAAGAAACATATGGATATGCGTTTGATGACCTTAAATCTTGAAGTTGTGACATTTTTAAAATTCTCTTAGAAAATAAACACGGAAAAATTTGCTTTTGGTGGCACAGGCAATTGTACCTCTTGCATTCTTTTTTCTTCTGTATTTTAAAAGTTTTTTACAGTACTAATTTCCCTCTCTTTTCTAAGGAAAACTTTATTTGTATAGTATACGTACATACATACATATATGTATATAGATACATACATACATATGTGTGTATAGATATATGTATGTATCTATACACACATACATTTGTGTGTATACATACATATATACATATATATGTGTGTGTATATACATACATACATACATATGTATATATATATATGCTGTACACATATTGGAATGAGTTCTATTTCTTGTTTTTCTTATCCAAAAGTATTTTCGGACGTCCATTATACTAAATGCATGTTTGGGAGTGATTTTGAAATGGTTAAAATCACTTTTGTCATGTTTAAATCACTCCGAAAGACACCATTAATCACTTAAAATCAATTCAATGTCCAATTATACACTTTTAAAAGTATCTTTCATACTGTTAAAATTGATTTTGAAAGCTTCTCTAAAAAAAATTGATTTTGAAAACATTTTAGAATCATTTCCAAACATGCTATAAAGCTATGTGCTCCTCACCTATTGTGCTGTTTGACAAGATCAATGTCTGAGTTACTTTTTTTCAAGAAAAAATAAATATTGTTGCTATTATTTCTTTTGGAGTTTCTTAGACATCAATTGTGCTTAAGATGATGTAGTTTAGTGTATTGCTTACATATGGCTAAATTTTTTATTTCAGGTTGGGTTTGTGAACTCCTTGACCTTTGCCAAATCTGGAAGGTTTGTGGTGGCTGGAGTTGGGCAGGTAATCGTGACACAAATTGAACTTTTATGCATGTTTAATTATTTTTTGTGGTAGAAGTTTGAAGTAGAGGACTACTACTACTGGTTTCTATATGTTTAACATTTATATATATGTATATAAAACAATCTAGAAGCTTCTGTTTTTCTAAAGGAACAAATTTTCACTAATCTAACTTCTAGAAAGTCTCTCAACTATGATCAGATTAATTACTCTCTATCTTCTTTTTTTGGGATAAGAAACAATTCCATTGGTGGTGTGAAATTACAAAAGAGAGATGACCCCAATAGGGAAATACCTCTCTAATCAGAAAGGAGGGAAGTAAAGCTATAGACTATAGTTGTGAAAAATGGGAGATTTATACCAAGTCACAGCCATATTAACTAAAGTATCAAGAAATCTGTTATAGGTGAATTCCTTATACTTGATTTTTTTCTTGCGAAATGTCCCAGCAGTAGGCTCGAACGAGTTTTCCAATAGGAGCTTTCTTTCCTTTTTTAAGGGGTGACCACCCAAAGTGTGTGGAAGAAACATCTTTGGGGCTTTGGGTAGGGCGTTTTGCCAACTTATAGGACATTAGTAGGTGGCACCAAAATTTCCTTGTACAATCACAAGTAATGAGGGAGATGATTCTGTGATTCTAGGTCTTGTTTGCAGATGATGCACCATTAAGGAGATAAGTTCCAGTGGGGTAGCTTTCTTTGAGCTTGCCATTTGTATTGATGGCCTAGTGTGATAGTTCCTAGAGGACCTGAGTTTTCCTAGGGAGTGTTCTTTCCAAATCCATTAAAAAAACTGTGGAGGAGGCTCTTTTTTGCGCTGGTGGAAAAAGATGCTCCAATTTCTAGATGCATTTGTCCTATCTTTGGGATAAAATGGTAGGTCCGAGGCTATTCAATGCACACTCTTCAATCTTCTCATCTCTGATATTTCTTCAAAGCGTAAGCTTCCATGAGTTTAAATCTGCAAGCCACATGTCCTTTACGGCCCCATCTTTTGAGTTTTGAGAGAGAGAGATAAGAGGAAGACTTCTTAAAGTGGTTCTTACTTCTTCCCCAAACCAAGTGTCTTTCCAGAAGGATATGCATGTTCCATCTCTGATTTGGTTGGCCATTCTGTCATGAATGGGAGGGGGCAGTGTTTCAGGATGGTCTTCCAAGGACCTTTGCTGGGTGCAAAGGTGGAGCTGTGTGCCAATTTATTGGATGTCCCCGAAGGGACAAAGGTGGAGCATGCGTTGAGGGGATTATACTCATATTTTGCATTAATCACCTTCCTTCATAGTGCTTTTTAATTACAAATGTGCTAGAATACACGCACCCAGGAACAACTTTGTATTGAGAAATATCCACTCTTACTCCTCTCTAGATATTTTCCTTCAAGATTCCTAGATTTCTTTCAAACCTAAATCTCCCTAATGATTGCTTTGATGATATTCACCCATATCACGTGGCTTTACTTTGGTGCTCTACTATGGATAAGGTTTGTAAACTATTGCATTTAGCACATGTATGTGTATCCAACACCCATGAAGCATCAAGACAATGGAGGAACAACTAAAAATTTCTAGTATAAGAACAATGAAAAATAAACAATCTTGATCTTCACCGTTCTTGCAGTTGAAACAAAGTATAGATACCGATGGCTGTAAAACAACAAAGGGTCATTTCCTCTGTAATTTTTCTGCTCTGTTTAATCCATCATCTTGAAAACTCCATAACAAAATATTTATCATCTTTGGCCAAATCTAGAAGCTTTTGTTTTTATATCTTGTAAAAGCTATTAACAACAATAGAGTAGCAGTTCACAGTAAGGAAAATAAATGCAAGGATGGGAAATTACCCTTTGTTAATCACTCTATTGTGCTAAAAATTAGGTTAATAAAGACTTTAAAATATTTCATGCAAGGTTTAGGAATTTGGTAGTTCGAGGTTCTGCCTTGTACAAAAGGTTCTTCCAATAAGCATCTCTTTGTTTTGTTATGATCCATTGGATTTCTTGCAACGTTGTTGGTGAATTGAATGTCGCATAACATTTTATCTAAATTATGAGTATCGATCTTTAGCTCCGTCAAAAGTTTTGGAATCTACATTCCTTCATAGATTCCAAAGAGCTTTGTATTCAGATTTTTGTGCTACTTCTTGCTATGACGACTTGTTCTTTACTAATCCAAGTGACCAAATTATCCCACATATAGGAGCGATATGTTACTATATATCTCCAGAAGACCAGAAGTTCTCTATCCCAATTAGCATCATTGTAGAGCTCTACAAGTCTGTTTGATGACTTTTTGAGTAACAGTCCATGACCTAGATTGCCTTTCAAGTATCTCAAAATCTTGTTTACAGCTCCCACGTTCATTTTGATTGTTAGCTAACAATGCTAGTAGAGTATGCAAGGTCAGATTTGGTAGGTGAAAGTTAAATTAACTTTCCCACAAGTCATCGATACGTGCCCTTGTTAATTGGAATAACCTCTTCACTTTTTAGTGTAAAGCTAGATTTGGATATGTGGGTGTTTGTGCTGGTCGACACCTAGATTTCTCGTCTATTTTAGTAAGTCTAGGATATATTTCCTAAGAGAAATTACAATGCTATTTTTGGATCATGCCACTTCCATGCCTAAAAAATATCTTAAACTTCCCATTTTTTGATTTCAAACTCAAGTTCTTAATTTGACATTGGTAATAGTTTTTGTTTTTTTTGTTTTTTTTAATAAGAACAACTGCTTTCATTGAGAAAAAGTGAAAGAATATACGGGCATACAAAAATCAAGCCCACAAAAAGTTACTTCTAACTAATGCTGTAGTGAATCTATCCAACCATGCACGTGGAGATTGCCTTAATCCATACAAAAACTTTCACAACTTCCACACAAAGTTGCTATTGGACCCGTCCCATCTTTTCGAATGCTAATGAACGGTTTCTCCTCCACCTAATGAGACCCCTCCGTTGCTAGCATCTCTGTCCTATGGAAACTTCCATAGATCTCTTTCCAGGATTTTCTCTGATCCTTGCAGGAATCTTTAAAATAGATAATAAAGTAAGCAAGTTTTACATAATAGAATTGGTTAAGTAGACGCATAGTCGATTTAAGCCAGCCTACTTCCTTTGGTGATGAAAGAAGCACATTGTAATCCTCTCAAAGAAAAATAAATTTTTTCTTAATCTCTCTCTGTTCAGTTGTAGATTGTAAATGCTTTTTGTCGAGTTCTTATATTTACACCCAGAGATAGCAAAACCTTCTTAACCAAATGGAAAAGTCTGATGATTCTTTGATTCTTTTTGTAGTTTTCAATGAAATTATTTCTTAAAAAAAAAAAAAAACTCGCACCGGCATTGGTACTATGATGATTTGGATTCATATCTAGATTCCTGACTTCCTTTATTGACTTCTCTGATTGAATATATTTCTCTCTTCTACTTTTTTGGTTTGTGTTTATATGGCAAGATAGTTGTCAGTCAGTTGTCTTCTCCCTTCATAATTTTCGTACACTTGCTATGCCGAGAGCATAACAGCTTGCTCAGTGCTTGACACCAATAGTTGAACTTCATGACAGGAACCTCGTCTAGGAAGGTGGGGGCGAATCCCAGATGCTCGGAATGGAGTTGCAGTTCATCCCCTTAAGCTCTCATGAGACTGAACTGAAAAGGTTATATACCAAAACCAATTTTGACTTCTCTGAGTTCTAAAGTAAAATTGAATGAGTTTCCCCTCTTCGCTCTTCCCCTCTTTGTTTCTTTATGTATTTGTTTTTTCACTCACCTGCCTAACTGAGTTTTTACCACATTTTGGCCATGGTAACAATTGTCAAATTAGAGTATTCATATTTCTTACTGAGAAGGGTGAGTTTGCAAGCCCATTGTGGGCGTAAAACTACCCAGAGAGATGAACTGCAAAGATAGATTATGTTTATAATCAAATGTGCCGGTTAACTTTTTACCTTTTTGGCAATTCATTATTCAACTGTTTCCAAGTAAGTTATTGTATTAAGGTTCACGGTGTTTCATTACTTTGTGCGTCACAAACTGCTAGTAATCGTTGATATATCTCTTATTTTTA

mRNA sequence

AAAAAACCCTACGTTCTCCCTCCCAAACACGCACGTTGCCTCCCCACTCCACACACACGGGCTTCTGTCGCTCTAGCTCCGGCTACCAGGCGACGATCAATCTCTGCGTGAACTCCCTGCGTAACTCCCATAGACGACAGCAACTCCGATTAACCAGCGCCAGAGACTGGACTGAGACTTCGACAGAGACTGCAACTCGACGGTGACGGCGACTCCGGGCGGGGACTTCGACTCTTACTACGACGGCAACGGTGAAGCATACGAAAATCACGACGAGACGACTTCTTTCTCAAACTTCAACCATTTGTTAGTGATCTCGTTTGGGTAAACTTGTAAAGATGCCGAAGAAGAAAATCTCGGCCCCTCCTAAAGGCGCAAAGAAGGGGAAGAATTTTCCACTCAGTAAGGACCCTTTCTTCAGTTCTGAATCAAGGAAACGAAGGAAGATTGTTGATGATGAGATTGAGAGCGGTGAGTCAGACGAGGATAATGCGTTAGTGGGCGTTGAGGATGAGGAGTTTGAGGAAGAAACTGTTGACGAGAAAAGGAAGAGAGTAGCAATCGAGTACTTGGAGAAAATTCGGGAAATTGCGAAAAGAGAAAAGGAGAGGGAGGATGAAGAGAAGGATGAGGATGAGAGTGGTGACGAAGGCGAAAAAGATTCACTTGTTGCACAAATTCTTCAGCAAGAGCAACTCGAAGATAGTGGAAGGCTTCGGAGAGAAATTGCATCAAGGGTTCAGAAGCCAGTAGCTAGAGATGAATTTCAATTCTTGATTAAGCACAGACAATCTGTTACAGCTGTGGCTCTATCTGAGGATGATTTGAAGGGGTTTTCATCGTCAAAGGATGGTACCATCTTACACTGGGATGTAGATAGTGGTAAAGGGGAAAAATATCAATGGCCTAGTGATGAAGTATTGAGATTGCATGGGGCTAAGGATCCCCAAGGTCGGGCGACAAGGCATAGTAAAGTCACTTTATCATTAGCTGTTAGTTCTGATGGTCGATATTTGGCAAGTGGAGGCTTAGACCGCCATGTGCATATATGGGATACTCGTACAAGAGAGCATATTCAGGCATTTCCTGGTCATAGAGGACCTGTTTCGTGTTTGACTTTCAGGCAAGGGACTTCAGAACTTTTTTCTGGTTCATATGATCGAACTGTCAAGATATGGAATGTGGACGACAGAGCTTATATAAATACATTGTTTGGTCACCAAAGCGAAGTATTAACTATTGATTGCCTACGTAAAGAAAGATTACTTACTGTTGGACGTGATCGGAGTATGCAATTATGGAAGGTTCCAGAGGAGTCTCGTTTAGTATTTCGTGCTCCTGCATCATCCTTAGAATGTTGCTGTTTTATAAGCAATGATGAATTCTTATCTGGATCAGATGACGGCAGTATTGAGCTGTGGACTGCATTAAAAAAGAAGCCTGTTTTTATTGCACAAAATGCTCATCCTTCTTCATCATCTTCCATGAATTTGGAACTAAAGGAAAATGGTGCCGTCCCCAATGGTTGTATGGGAAATGGGGACAGTTTGTCAGCATACTCTTGGGTAAGTTCAGTCTCAGTATGTAGAAATAGTGACCTTGCTGCATCGGGTGCTGGCAACGGTTCTGTTCGTTTATGGGCTCTCACAAGTGATAAGAAAGATGTGAAACCATTATATGACCTCCCTCTGGTTGGGTTTGTGAACTCCTTGACCTTTGCCAAATCTGGAAGGTTTGTGGTGGCTGGAGTTGGGCAGGAACCTCGTCTAGGAAGGTGGGGGCGAATCCCAGATGCTCGGAATGGAGTTGCAGTTCATCCCCTTAAGCTCTCATGAGACTGAACTGAAAAGGTTATATACCAAAACCAATTTTGACTTCTCTGAGTTCTAAAGTAAAATTGAATGAGTTTCCCCTCTTCGCTCTTCCCCTCTTTGTTTCTTTATGTATTTGTTTTTTCACTCACCTGCCTAACTGAGTTTTTACCACATTTTGGCCATGGTAACAATTGTCAAATTAGAGTATTCATATTTCTTACTGAGAAGGGTGAGTTTGCAAGCCCATTGTGGGCGTAAAACTACCCAGAGAGATGAACTGCAAAGATAGATTATGTTTATAATCAAATGTGCCGGTTAACTTTTTACCTTTTTGGCAATTCATTATTCAACTGTTTCCAAGTAAGTTATTGTATTAAGGTTCACGGTGTTTCATTACTTTGTGCGTCACAAACTGCTAGTAATCGTTGATATATCTCTTATTTTTA

Coding sequence (CDS)

ATGCCGAAGAAGAAAATCTCGGCCCCTCCTAAAGGCGCAAAGAAGGGGAAGAATTTTCCACTCAGTAAGGACCCTTTCTTCAGTTCTGAATCAAGGAAACGAAGGAAGATTGTTGATGATGAGATTGAGAGCGGTGAGTCAGACGAGGATAATGCGTTAGTGGGCGTTGAGGATGAGGAGTTTGAGGAAGAAACTGTTGACGAGAAAAGGAAGAGAGTAGCAATCGAGTACTTGGAGAAAATTCGGGAAATTGCGAAAAGAGAAAAGGAGAGGGAGGATGAAGAGAAGGATGAGGATGAGAGTGGTGACGAAGGCGAAAAAGATTCACTTGTTGCACAAATTCTTCAGCAAGAGCAACTCGAAGATAGTGGAAGGCTTCGGAGAGAAATTGCATCAAGGGTTCAGAAGCCAGTAGCTAGAGATGAATTTCAATTCTTGATTAAGCACAGACAATCTGTTACAGCTGTGGCTCTATCTGAGGATGATTTGAAGGGGTTTTCATCGTCAAAGGATGGTACCATCTTACACTGGGATGTAGATAGTGGTAAAGGGGAAAAATATCAATGGCCTAGTGATGAAGTATTGAGATTGCATGGGGCTAAGGATCCCCAAGGTCGGGCGACAAGGCATAGTAAAGTCACTTTATCATTAGCTGTTAGTTCTGATGGTCGATATTTGGCAAGTGGAGGCTTAGACCGCCATGTGCATATATGGGATACTCGTACAAGAGAGCATATTCAGGCATTTCCTGGTCATAGAGGACCTGTTTCGTGTTTGACTTTCAGGCAAGGGACTTCAGAACTTTTTTCTGGTTCATATGATCGAACTGTCAAGATATGGAATGTGGACGACAGAGCTTATATAAATACATTGTTTGGTCACCAAAGCGAAGTATTAACTATTGATTGCCTACGTAAAGAAAGATTACTTACTGTTGGACGTGATCGGAGTATGCAATTATGGAAGGTTCCAGAGGAGTCTCGTTTAGTATTTCGTGCTCCTGCATCATCCTTAGAATGTTGCTGTTTTATAAGCAATGATGAATTCTTATCTGGATCAGATGACGGCAGTATTGAGCTGTGGACTGCATTAAAAAAGAAGCCTGTTTTTATTGCACAAAATGCTCATCCTTCTTCATCATCTTCCATGAATTTGGAACTAAAGGAAAATGGTGCCGTCCCCAATGGTTGTATGGGAAATGGGGACAGTTTGTCAGCATACTCTTGGGTAAGTTCAGTCTCAGTATGTAGAAATAGTGACCTTGCTGCATCGGGTGCTGGCAACGGTTCTGTTCGTTTATGGGCTCTCACAAGTGATAAGAAAGATGTGAAACCATTATATGACCTCCCTCTGGTTGGGTTTGTGAACTCCTTGACCTTTGCCAAATCTGGAAGGTTTGTGGTGGCTGGAGTTGGGCAGGAACCTCGTCTAGGAAGGTGGGGGCGAATCCCAGATGCTCGGAATGGAGTTGCAGTTCATCCCCTTAAGCTCTCATGA

Protein sequence

MPKKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVGVEDEEFEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGDSLSAYSWVSSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQEPRLGRWGRIPDARNGVAVHPLKLS

Homology

[Close]

BLAST of Lsi08G001630 vs. Swiss-Prot
Match: YAO_ARATH (U3 snoRNP-associated protein-like YAO OS=Arabidopsis thaliana GN=YAO PE=2 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 1.0e-156
Identity = 299/517 (57.83%), Postives = 378/517 (73.11%), Query Frame = 1


Query: 3   KKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIV--DDEIESGESD-EDNALVG---- 62
           KKK  +  +G KKG N    +DPFF  E +KRRK+   DD+IES +SD E+N   G    
Sbjct: 7   KKKGGSFKRGGKKGSN---ERDPFFEEEPKKRRKVSYDDDDIESVDSDAEENGFTGGDED 66

Query: 63  -------VEDE-EFEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEK 122
                  VEDE EF +ET  EKRKR+A E L + RE  +RE+E  D + D+DE  DE  K
Sbjct: 67  GRRVDGEVEDEDEFADETAGEKRKRLAEEMLNRRREAMRREREEADNDDDDDEDDDETIK 126

Query: 123 DSLVAQILQQEQLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFS 182
            SL+     Q+Q EDSGR+RR IASRVQ+P++ D F  ++KHR+SV +VALS+DD +GFS
Sbjct: 127 KSLM-----QKQQEDSGRIRRLIASRVQEPLSTDGFSVIVKHRRSVVSVALSDDDSRGFS 186

Query: 183 SSKDGTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLA 242
           +SKDGTI+HWDV SGK +KY WPSDE+L+ HG K  + R   HS+ +L+LAVSSDGRYLA
Sbjct: 187 ASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLA 246

Query: 243 SGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAY 302
           +GG+DRHVHIWD RTREH+QAFPGHR  VSCL FR GTSEL+SGS+DRTVK+WNV+D+A+
Sbjct: 247 TGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAF 306

Query: 303 INTLFGHQSEVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISND 362
           I    GHQ E+L ID LRKER LTVGRDR+M   KVPE +R+++RAPASSLE CCFIS++
Sbjct: 307 ITENHGHQGEILAIDALRKERALTVGRDRTMLYHKVPESTRMIYRAPASSLESCCFISDN 366

Query: 363 EFLSGSDDGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD----- 422
           E+LSGSD+G++ LW  LKKKPVF+ +NAH             +G   NG + NGD     
Sbjct: 367 EYLSGSDNGTVALWGMLKKKPVFVFKNAHQDI---------PDGITTNGILENGDHEPVN 426

Query: 423 -SLSAYSWVSSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFA 482
            + SA SWV++V+  R SDLAASGAGNG VRLWA+ ++   ++PLY+LPL GFVNSL FA
Sbjct: 427 NNCSANSWVNAVATSRGSDLAASGAGNGFVRLWAVETNA--IRPLYELPLTGFVNSLAFA 486

Query: 483 KSGRFVVAGVGQEPRLGRWGRIPDARNGVAVHPLKLS 499
           KSG+F++AGVGQE R GRWG +  A+NGVA+HPL+L+
Sbjct: 487 KSGKFLIAGVGQETRFGRWGCLKSAQNGVAIHPLRLA 504

[Close]

BLAST of Lsi08G001630 vs. Swiss-Prot
Match: YAOL_ARATH (U3 snoRNP-associated protein-like EMB2271 OS=Arabidopsis thaliana GN=EMB2271 PE=2 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 2.2e-154
Identity = 287/491 (58.45%), Postives = 364/491 (74.13%), Query Frame = 1


Query: 12  GAKK-GKNFPLSKDPFFSSESRKRRKIV---DDEIESGESDEDNALVGVEDEEFEEETVD 71
           GAK+ GK   +  DPF   E+ KRRK     DD+IES ES+E+  +    ++EF  ETV 
Sbjct: 10  GAKRRGKKSSIDHDPFLEEETEKRRKFNYDDDDDIESVESEEEGKVGEEVEDEFAHETVG 69

Query: 72  EKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQLEDSGRLR 131
           EKRKR+A + L +I E  +RE E ++EE D+        +DSLVA+ L QEQLE SGR+R
Sbjct: 70  EKRKRLAEDTLNRIEEAKQREHEEDNEEDDDF-------RDSLVAKTLMQEQLEKSGRVR 129

Query: 132 REIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVDSGKGEKY 191
           R  A RVQ   + D+F+ ++KH+ SVT VALS+DD +GFS SKDGTILHWDV SGK ++Y
Sbjct: 130 RANALRVQDLQSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGKSDEY 189

Query: 192 QWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRTREHIQ 251
           +WPSDEVL+ HG K  +   TRH+K +L+LAVSSDGRYLA+GG+D HVH+WD RTREH+Q
Sbjct: 190 KWPSDEVLKSHGLKFQESWYTRHNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQ 249

Query: 252 AFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLTIDCLRKE 311
           AF GH G VS L FR+GT+ELFSGSYD T+ IWN + R YI + FGHQSE+L+ID L +E
Sbjct: 250 AFTGHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDALGRE 309

Query: 312 RLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWTALKKK 371
           R+L+VGRDR+MQL+KVPE +RL++RA  S+ ECCCF+++DEFLSGSD+GSI LW+ LKKK
Sbjct: 310 RVLSVGRDRTMQLYKVPESTRLIYRASESNFECCCFVNSDEFLSGSDNGSIALWSILKKK 369

Query: 372 PVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGDSLSAYSWVSSVSVCRNSDLAASGAG 431
           PVFI  NAH          + ++ +V + C        A SWVSSV+VCR S+LAASGAG
Sbjct: 370 PVFIVNNAHH--------VIADHDSVNHNC------TPACSWVSSVAVCRGSELAASGAG 429

Query: 432 NGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQEPRLGRWGRIPDAR 491
           NG VRLW + S    ++PLY+LPL GFVNSL FAKSGRF++AGVGQEPRLGRWG +  A+
Sbjct: 430 NGCVRLWGVESGSSAIQPLYELPLPGFVNSLAFAKSGRFLIAGVGQEPRLGRWGCLKSAQ 479

Query: 492 NGVAVHPLKLS 499
           NGVA+HPL+LS
Sbjct: 490 NGVAIHPLRLS 479

[Close]

BLAST of Lsi08G001630 vs. Swiss-Prot
Match: YAO_ORYSJ (U3 snoRNP-associated protein-like YAOH OS=Oryza sativa subsp. japonica GN=Os03g0625900 PE=2 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 6.8e-148
Identity = 280/510 (54.90%), Postives = 363/510 (71.18%), Query Frame = 1


Query: 2   PKKKISAP-PKGAKKGKNFPLSKDPFFSSESRKRRKIV-DDEIESGESDEDNALVGV--- 61
           P+K++S P P+   +G+     +DPFF SE ++RR    D++IES +SD +         
Sbjct: 5   PRKRVSRPKPRATSRGRGGG-DEDPFFESEPKRRRGGGRDEDIESEDSDLEGVAAAAAGG 64

Query: 62  --------EDEEFEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKD 121
                   E+EE E+ET  EK+ R+A E L+K+ + A+R   R ++++DEDE  + G + 
Sbjct: 65  VGDDGEEEEEEEEEQETAGEKKMRIAKELLKKVTDAARR---RREDDEDEDEGEEAGRR- 124

Query: 122 SLVAQILQQEQLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSS 181
             VA IL + Q E+SGR R E+A R+ +P   D F+ L+KHRQ VTAV LS+D  KGFS+
Sbjct: 125 -RVADILLKRQFEESGRKRMELADRILQPDPEDGFKMLVKHRQPVTAVVLSKDSDKGFSA 184

Query: 182 SKDGTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLAS 241
           SKDG I+HWDV++GK EKY WPS+ VL  H AK P   + + SK  L+LAVS+DGRYLAS
Sbjct: 185 SKDGVIVHWDVETGKSEKYLWPSENVLVSHHAKPP--LSAKRSKQVLALAVSADGRYLAS 244

Query: 242 GGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYI 301
           GGLDRH+H+WD R+REHIQAF GHRG +SCL+F   +SELFSGS+DR +  WN +DR Y+
Sbjct: 245 GGLDRHIHLWDVRSREHIQAFSGHRGAISCLSFGPDSSELFSGSFDRKIMQWNAEDRTYM 304

Query: 302 NTLFGHQSEVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPA-SSLECCCFISND 361
           N LFGHQ+EVLT+D L K+RLLTV RDR+M LWK+PEES+L+FRAPA +SLECCCFI + 
Sbjct: 305 NCLFGHQNEVLTMDALSKDRLLTVARDRTMHLWKIPEESQLLFRAPATASLECCCFIDDK 364

Query: 362 EFLSGSDDGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGDSLSAY 421
           EFL+GSDDGS+ELW+ ++KKP  I +NAHP   +  NL   EN    NG        SA 
Sbjct: 365 EFLTGSDDGSVELWSIMRKKPTHIIRNAHPVFRN--NLNSLENNVEENGIHKPESVSSAQ 424

Query: 422 SWVSSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFV 481
           SWVS+++  R SDLAASGA NGSVRLWA+  D K ++PL+ L L GFVNSL   KSGRF+
Sbjct: 425 SWVSAIAARRGSDLAASGAANGSVRLWAIEPDSKGIRPLFSLRLDGFVNSLAIPKSGRFI 484

Query: 482 VAGVGQEPRLGRWGRIPDARNGVAVHPLKL 498
           VAGVGQEPRLGRWGR+  A+NGV +HP++L
Sbjct: 485 VAGVGQEPRLGRWGRVRSAQNGVVIHPIRL 504

[Close]

BLAST of Lsi08G001630 vs. Swiss-Prot
Match: U3IP2_MOUSE (U3 small nucleolar RNA-interacting protein 2 OS=Mus musculus GN=Rrp9 PE=1 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 9.0e-84
Identity = 186/466 (39.91%), Postives = 274/466 (58.80%), Query Frame = 1


Query: 38  VDDEIESGESDEDNALVGVEDEEFEE--ETVDEKRKRVAIEYLEKIREIAKREKEREDEE 97
           +++EI S    E  A    E+EE EE  ET  EK+ R+A  YLE++R+        ++EE
Sbjct: 45  MNEEISSDSESESLAPRKTEEEEEEELEETAQEKKLRLAKLYLEQLRQ--------QEEE 104

Query: 98  KDEDESGDEGEKDSLVAQILQQEQLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTA 157
           K E  + +E +    VA  L+++ LE  GRL++ +A  +Q P   D  + L  H+ S+T 
Sbjct: 105 KAEARAFEEDQ----VAGRLKEDVLEQRGRLQKSVAKEIQAPAPTD-IRVLRGHQLSITC 164

Query: 158 VALSEDDLKGFSSSKDGTILHWDVDSGKGEKYQWPSDEVLRLH----GAKDPQGRATRHS 217
           + ++ DDL  FS++KD TI+ W V++G+            +LH      K  QG+   HS
Sbjct: 165 LVITPDDLAIFSAAKDCTIIKWSVETGR------------KLHVIPRAKKGAQGQPAGHS 224

Query: 218 KVTLSLAVSSDGRYLASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSG 277
              L +A+SSDG+YLASG   + + IW+ ++ +H+  F GHR  VS L FR+GT +L+S 
Sbjct: 225 SHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRKGTHQLYST 284

Query: 278 SYDRTVKIWNVDDRAYINTLFGHQSEVLTIDCLRKERLLTV-GRDRSMQLWKVPEESRLV 337
           S+DR+VK+WN  + +Y+ TLFGHQ  V  +D L +E  +T  GRD ++++WK+PEES+LV
Sbjct: 285 SHDRSVKVWNAAENSYVETLFGHQDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLV 344

Query: 338 FRAPASSLECCCFISNDEFLSGSDDGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKEN 397
           F     S++C   I+ +  +SG+DDGS+ LW   KK+P+ + + AH              
Sbjct: 345 FYGHQGSIDCIHLINEEHMVSGADDGSVALWGLSKKRPLALQREAH-------------- 404

Query: 398 GAVPNGCMGNGDSLSAYSWVSSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLP 457
                G  G    L    WVSSV+   N+DL A+G+ N  VRLW      + + PL D+P
Sbjct: 405 -----GLHGE-PGLEQPFWVSSVAALLNTDLVATGSHNARVRLWQCGEGFRQLDPLCDIP 464

Query: 458 LVGFVNSLTFAKSGRFVVAGVGQEPRLGRWGRIPDARNGVAVHPLK 497
           LVGF+NSL F+ +G F+VAGVGQE RLGRW RI +ARN V + PL+
Sbjct: 465 LVGFINSLKFSSAGDFLVAGVGQEHRLGRWWRIKEARNSVCIIPLR 465

[Close]

BLAST of Lsi08G001630 vs. Swiss-Prot
Match: U3IP2_HUMAN (U3 small nucleolar RNA-interacting protein 2 OS=Homo sapiens GN=RRP9 PE=1 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 2.7e-80
Identity = 191/503 (37.97%), Postives = 286/503 (56.86%), Query Frame = 1


Query: 4   KKISAPPKGAKKGKNFPLSKDPFFSSESRKRRK---IVDDEIESGESDEDNALVGVEDEE 63
           +K   P  GA  G      +    S+  R + K    +++EI S    E  A    E+EE
Sbjct: 8   RKRGKPASGAGAGAGAGKRRRKADSAGDRGKSKGGGKMNEEISSDSESESLAPRKPEEEE 67

Query: 64  FEE--ETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQE 123
            EE  ET  EK+ R+A  YLE++R+        ++EEK E  + +E +    VA  L+++
Sbjct: 68  EEELEETAQEKKLRLAKLYLEQLRQ--------QEEEKAEARAFEEDQ----VAGRLKED 127

Query: 124 QLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWD 183
            LE  GRL++ +A  +Q P + D  + L  H+ S+T + ++ DD   FS++KD +I+ W 
Sbjct: 128 VLEQRGRLQKLVAKEIQAPASAD-IRVLRGHQLSITCLVVTPDDSAIFSAAKDCSIIKWS 187

Query: 184 VDSGKGEKYQWPSDEVLRLH----GAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRH 243
           V+SG+            +LH      K  +G+   HS   L +A+SSDG+YLASG   + 
Sbjct: 188 VESGR------------KLHVIPRAKKGAEGKPPGHSSHVLCMAISSDGKYLASGDRSKL 247

Query: 244 VHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGH 303
           + IW+ ++ +H+  F GHR  VS L FR+GT +L+S S+DR+VK+WNV + +Y+ TLFGH
Sbjct: 248 ILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSYVETLFGH 307

Query: 304 QSEVLTIDCLRKERLLTV-GRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGS 363
           Q  V  +D L +E  +T  GRD ++++WK+PEES+LVF     S++C   I+ +  +SG+
Sbjct: 308 QDAVAALDALSRECCVTAGGRDGTVRVWKIPEESQLVFYGHQGSIDCIHLINEEHMVSGA 367

Query: 364 DDGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGDSLSAYSWVSSV 423
           DDGS+ LW   KK+P+ + + AH                   G  G    L    W+SSV
Sbjct: 368 DDGSVALWGLSKKRPLALQREAH-------------------GLRGE-PGLEQPFWISSV 427

Query: 424 SVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQ 483
           +   N+DL A+G+ +  VRLW      + +  L D+PLVGF+NSL F+ SG F+VAGVGQ
Sbjct: 428 AALLNTDLVATGSHSSCVRLWQCGEGFRQLDLLCDIPLVGFINSLKFSSSGDFLVAGVGQ 465

Query: 484 EPRLGRWGRIPDARNGVAVHPLK 497
           E RLGRW RI +ARN V + PL+
Sbjct: 488 EHRLGRWWRIKEARNSVCIIPLR 465

[Close]

BLAST of Lsi08G001630 vs. TrEMBL
Match: A0A0A0KSP4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G647380 PE=4 SV=1)

HSP 1 Score: 927.5 bits (2396), Expect = 6.6e-267
Identity = 473/505 (93.66%), Postives = 485/505 (96.04%), Query Frame = 1


Query: 1   MPKKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVGVEDEE 60
           M KKK SAPP GAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDN L+GVEDEE
Sbjct: 1   MTKKKTSAPPNGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNGLMGVEDEE 60

Query: 61  FEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQL 120
           FEEETVDEKRKRVA+EYLEKIREIAKREKER DEEKDEDES DEGEKDSLVA+ILQQEQL
Sbjct: 61  FEEETVDEKRKRVAVEYLEKIREIAKREKERGDEEKDEDESDDEGEKDSLVAKILQQEQL 120

Query: 121 EDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVD 180
           EDSGRLRREIASRVQKPVARDEFQ LIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDV+
Sbjct: 121 EDSGRLRREIASRVQKPVARDEFQLLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVE 180

Query: 181 SGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT 240
           SGKGEKY+WPSDEVLRLHGAKDPQGRAT+HSKVT SLAVSSDGRYLASGGLDRHVHIWDT
Sbjct: 181 SGKGEKYRWPSDEVLRLHGAKDPQGRATKHSKVTFSLAVSSDGRYLASGGLDRHVHIWDT 240

Query: 241 RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLT 300
           RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQS+VLT
Sbjct: 241 RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSDVLT 300

Query: 301 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL 360
           IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL
Sbjct: 301 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL 360

Query: 361 WTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD-------SLSAYSWVSSV 420
           WTALKKKPVFI +NAH SSSSS NLELKENGA+PNGCMGNGD       +LSAYSW+SSV
Sbjct: 361 WTALKKKPVFIVRNAHSSSSSSTNLELKENGAIPNGCMGNGDANHNTSHNLSAYSWISSV 420

Query: 421 SVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQ 480
           SVCRNSDLAASGAGNGSVRLWALTSDKKDV+PLYDLPLVGFVNSLTFA SGRFVVAGVGQ
Sbjct: 421 SVCRNSDLAASGAGNGSVRLWALTSDKKDVRPLYDLPLVGFVNSLTFANSGRFVVAGVGQ 480

Query: 481 EPRLGRWGRIPDARNGVAVHPLKLS 499
           EPRLGRWGRIP ARNGVAVHPLKLS
Sbjct: 481 EPRLGRWGRIPAARNGVAVHPLKLS 505

[Close]

BLAST of Lsi08G001630 vs. TrEMBL
Match: M5WN42_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004203mg PE=4 SV=1)

HSP 1 Score: 717.2 bits (1850), Expect = 1.4e-203
Identity = 372/514 (72.37%), Postives = 429/514 (83.46%), Query Frame = 1


Query: 3   KKKISAP--PKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVG----- 62
           KK  SAP  PKGAKK K + L++D FFS+ES+KRRKI  DEIES +SD+D  +VG     
Sbjct: 5   KKGGSAPKGPKGAKKSKTYSLNEDSFFSTESKKRRKIDRDEIES-DSDDDYGVVGSDGEG 64

Query: 63  ----VEDEEFEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLV 122
                E+ E  EET DEKRKR+A EYLEK+R +A+REKE E++E DE E   EGE+DSLV
Sbjct: 65  GGEEAEEAEAIEETADEKRKRIAQEYLEKVRGLARREKEDEEDESDE-EGEKEGERDSLV 124

Query: 123 AQILQQEQLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKD 182
           A+ILQQ+QLEDSGR+RR IASRVQKP + DEF+  +KHRQSVTAVALSEDD KGFS+SKD
Sbjct: 125 AKILQQQQLEDSGRVRRAIASRVQKPESTDEFRISVKHRQSVTAVALSEDDFKGFSASKD 184

Query: 183 GTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGL 242
           GTILHWDVDSGK EKY WP +EVL+ HG KDPQGRAT+HSK  L+LAVSSDGRYLASGGL
Sbjct: 185 GTILHWDVDSGKSEKYLWPRNEVLKSHGVKDPQGRATKHSKHVLALAVSSDGRYLASGGL 244

Query: 243 DRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTL 302
           DRH+H+WDTRTREHIQAFPGHRGPVSCLTFRQG SELFSGSYDRTVKIWNV+ RAYI+TL
Sbjct: 245 DRHIHLWDTRTREHIQAFPGHRGPVSCLTFRQGASELFSGSYDRTVKIWNVEGRAYIDTL 304

Query: 303 FGHQSEVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLS 362
           FGHQ EVL+IDCLRKER+L+VG DRSMQL+KVPE SRLVFRAPASSLECCCFISND+FLS
Sbjct: 305 FGHQGEVLSIDCLRKERVLSVGHDRSMQLFKVPEASRLVFRAPASSLECCCFISNDDFLS 364

Query: 363 GSDDGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGDSL------- 422
           GSDDGS+ELW+ L+KKPV I +NAHP  ++  N+E K+   +PNG + NGD         
Sbjct: 365 GSDDGSVELWSMLRKKPVCIVKNAHPFLAARKNVEQKDGDRIPNGHIENGDHTSQSYHCS 424

Query: 423 SAYSWVSSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSG 482
           S YSW+SSV+VCR SDLAASGAGNGSVRLWA+ S+ + +KPL+DLPLVGFVNSL FAKSG
Sbjct: 425 STYSWISSVTVCRGSDLAASGAGNGSVRLWAVESESRAMKPLHDLPLVGFVNSLAFAKSG 484

Query: 483 RFVVAGVGQEPRLGRWGRIPDARNGVAVHPLKLS 499
            F+VAGVG+EPRLGRWG I  ARNG+A+HPLKLS
Sbjct: 485 GFLVAGVGKEPRLGRWGHISSARNGIAIHPLKLS 516

[Close]

BLAST of Lsi08G001630 vs. TrEMBL
Match: A0A067GIZ6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010296mg PE=4 SV=1)

HSP 1 Score: 708.4 bits (1827), Expect = 6.3e-201
Identity = 374/511 (73.19%), Postives = 427/511 (83.56%), Query Frame = 1


Query: 4   KKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIV--DDEIESGESD------EDNALVG 63
           KK    P+G  KGK F +++DPFF+ E +KRRKI   DD+IES +S+      E +    
Sbjct: 7   KKKGPAPRG--KGK-FSINQDPFFAGEPKKRRKIDYDDDDIESADSEDYDDEVEKSGPEE 66

Query: 64  VEDEEFEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGD-EGEKDSLVAQI 123
            E EE EEET DEKRKRVA  YLEKIREIA+REKE E++  +  E G+ EGE+DSLVA+I
Sbjct: 67  SEGEEEEEETADEKRKRVATAYLEKIREIARREKEEEEDGDEGREVGEKEGERDSLVAKI 126

Query: 124 LQQEQLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTI 183
           LQQEQLE+SGR+RR IASRVQKP A DEF+ L+KHRQSVTAVALSEDD KGFS+SKDG+I
Sbjct: 127 LQQEQLEESGRVRRVIASRVQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSI 186

Query: 184 LHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRH 243
           LHWDV SGKG KY WPS+EVL+ HGAKDPQGRAT+ SK  L+LAVSSDGRYLASGGLDRH
Sbjct: 187 LHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRH 246

Query: 244 VHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGH 303
           +H+WDTR +EHIQAFPGHRGPVSCLTFRQGTSELFSGS+DRTVKIWN +DRAYI+TLFGH
Sbjct: 247 IHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGH 306

Query: 304 QSEVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSD 363
           QSEVLTIDCLRKER+LTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSD
Sbjct: 307 QSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSD 366

Query: 364 DGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD-------SLSAY 423
           DGSIELW+ L+KKPV+I +NAHP      N E ++ G + NG   NG+       S SAY
Sbjct: 367 DGSIELWSLLRKKPVYIVKNAHPLLDGLKNFE-QDEGKISNGHSENGNLNPGSYHSSSAY 426

Query: 424 SWVSSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFV 483
           SWVSSV+VC  SDLAASGAGNGSVRLWA+ S+ KD++PLY+LPLVGFVNSL FAKSG+F+
Sbjct: 427 SWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFL 486

Query: 484 VAGVGQEPRLGRWGRIPDARNGVAVHPLKLS 499
           +AGVGQEPRLGRWG +P ARNGV VHP+KLS
Sbjct: 487 IAGVGQEPRLGRWGHLPAARNGVLVHPIKLS 513

[Close]

BLAST of Lsi08G001630 vs. TrEMBL
Match: V4TNW7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014949mg PE=4 SV=1)

HSP 1 Score: 706.4 bits (1822), Expect = 2.4e-200
Identity = 373/511 (72.99%), Postives = 427/511 (83.56%), Query Frame = 1


Query: 4   KKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIV--DDEIESGESD------EDNALVG 63
           KK    P+G  KGK F +++DPFF+ E +KRRKI   DD+IES +S+      E +    
Sbjct: 7   KKKGPAPRG--KGK-FSINQDPFFAGEPKKRRKIDYDDDDIESADSEDYDDEVEKSGPEE 66

Query: 64  VEDEEFEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGD-EGEKDSLVAQI 123
            E EE EEET DEKRKRVA  YLEKIREIA+REKE E++  +  E G+ EGE+DSLVA+I
Sbjct: 67  SEGEEEEEETADEKRKRVATAYLEKIREIARREKEEEEDGDEGREVGEKEGERDSLVAKI 126

Query: 124 LQQEQLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTI 183
           LQQEQLE+SGR+RR IASRVQKP A DEF+ L+KHRQSVTAVALSEDD KGFS+SKDG+I
Sbjct: 127 LQQEQLEESGRVRRVIASRVQKPEATDEFRGLLKHRQSVTAVALSEDDSKGFSASKDGSI 186

Query: 184 LHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRH 243
           LHWDV SGKG KY WPS+EVL+ HGAKDPQGRAT+ SK  L+LAVSSDGRYLASGGLDRH
Sbjct: 187 LHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRH 246

Query: 244 VHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGH 303
           +H+WDTR +EHIQAFPGHRGPVSCLTFRQGTSELFSGS+DRTVKIWN +DRAYI+TLFGH
Sbjct: 247 IHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGH 306

Query: 304 QSEVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSD 363
           QSEVLTIDCLRKER+LTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSD
Sbjct: 307 QSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSD 366

Query: 364 DGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD-------SLSAY 423
           DGSIELW+ L+KKPV+I +NAHP      N E ++ G + NG   NG+       S SAY
Sbjct: 367 DGSIELWSLLRKKPVYIVKNAHPLLDGLKNFE-QDEGKISNGHSENGNLNPGSYHSSSAY 426

Query: 424 SWVSSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFV 483
           SWVSSV+VC  SDLAASGAGNGSV LWA+ S+ KD++PLY+LPLVGFVNSL FAKSG+F+
Sbjct: 427 SWVSSVTVCGGSDLAASGAGNGSVHLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFL 486

Query: 484 VAGVGQEPRLGRWGRIPDARNGVAVHPLKLS 499
           +AGVGQEPRLGRWG +P ARNGV+VHP+KLS
Sbjct: 487 IAGVGQEPRLGRWGHLPAARNGVSVHPIKLS 513

[Close]

BLAST of Lsi08G001630 vs. TrEMBL
Match: W9R7L4_9ROSA (U3 small nucleolar RNA-interacting protein 2 OS=Morus notabilis GN=L484_026018 PE=4 SV=1)

HSP 1 Score: 694.5 bits (1791), Expect = 9.4e-197
Identity = 354/505 (70.10%), Postives = 420/505 (83.17%), Query Frame = 1


Query: 14  KKGKNFPLSKDPFFSSESRKRRKIVD-----DEIESGESDEDNALVG--------VEDEE 73
           K  K F LSKD FF+    KRR+ VD     D +ES  S++D  L G         E++E
Sbjct: 11  KANKRFSLSKDSFFAGNDSKRRRKVDGDGEGDVVESSNSEDDYYLGGSDAGEDEATEEKE 70

Query: 74  FEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQL 133
            ++ET DE RKR+A+ +L+++R+IA+R KE +D+E++ ++  ++G +DSLVAQILQQ+QL
Sbjct: 71  EQKETADEARKRLAMAHLDRMRDIARRAKEEDDDEEESEKEDEKGARDSLVAQILQQKQL 130

Query: 134 EDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVD 193
           EDSGR+RR IASR+++P A D+FQ L+KHRQSVTAVALSEDDLKGFS+SKDG+I+HWDVD
Sbjct: 131 EDSGRVRRSIASRIREPEASDQFQVLVKHRQSVTAVALSEDDLKGFSASKDGSIMHWDVD 190

Query: 194 SGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT 253
           SGKGEKY+WPS EVLR HGAKDPQGRAT+HSK  L+LAVSSDGRYLASGG DRHVH+WDT
Sbjct: 191 SGKGEKYRWPSSEVLRSHGAKDPQGRATKHSKTVLALAVSSDGRYLASGGSDRHVHLWDT 250

Query: 254 RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLT 313
           RTREHIQAFPGHRGPVSCL FRQG+SELFSGSYDRTVKIWN +DRAYIN+LFGHQSEVLT
Sbjct: 251 RTREHIQAFPGHRGPVSCLAFRQGSSELFSGSYDRTVKIWNAEDRAYINSLFGHQSEVLT 310

Query: 314 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL 373
           IDCL+KER+L VGRDRSMQL+KVPEESRLVFRAPASSLECCCFISND FLSGSDDGS+EL
Sbjct: 311 IDCLQKERVLAVGRDRSMQLFKVPEESRLVFRAPASSLECCCFISNDGFLSGSDDGSVEL 370

Query: 374 WTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNG-------DSLSAYSWVSSV 433
           W+ ++KKPV I +NAH   +++      E+  +PNG + NG       DS S YSWVSSV
Sbjct: 371 WSVMRKKPVCIVKNAHALFAANQKFG-GESERIPNGHIENGDHASENFDSSSVYSWVSSV 430

Query: 434 SVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQ 493
           ++CR SDLAASGAGNGSVRLWA+ S+ KD++PLY+LPLVGF NSL FAKSG F+VAGVGQ
Sbjct: 431 TLCRGSDLAASGAGNGSVRLWAIGSETKDIQPLYNLPLVGFANSLAFAKSGEFLVAGVGQ 490

Query: 494 EPRLGRWGRIPDARNGVAVHPLKLS 499
           EPRLGRWGRIP A+NGVAVHPLKLS
Sbjct: 491 EPRLGRWGRIPAAQNGVAVHPLKLS 514

[Close]

BLAST of Lsi08G001630 vs. TAIR10
Match: AT4G05410.1 (AT4G05410.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 554.7 bits (1428), Expect = 5.9e-158
Identity = 299/517 (57.83%), Postives = 378/517 (73.11%), Query Frame = 1


Query: 3   KKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIV--DDEIESGESD-EDNALVG---- 62
           KKK  +  +G KKG N    +DPFF  E +KRRK+   DD+IES +SD E+N   G    
Sbjct: 7   KKKGGSFKRGGKKGSN---ERDPFFEEEPKKRRKVSYDDDDIESVDSDAEENGFTGGDED 66

Query: 63  -------VEDE-EFEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEK 122
                  VEDE EF +ET  EKRKR+A E L + RE  +RE+E  D + D+DE  DE  K
Sbjct: 67  GRRVDGEVEDEDEFADETAGEKRKRLAEEMLNRRREAMRREREEADNDDDDDEDDDETIK 126

Query: 123 DSLVAQILQQEQLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFS 182
            SL+     Q+Q EDSGR+RR IASRVQ+P++ D F  ++KHR+SV +VALS+DD +GFS
Sbjct: 127 KSLM-----QKQQEDSGRIRRLIASRVQEPLSTDGFSVIVKHRRSVVSVALSDDDSRGFS 186

Query: 183 SSKDGTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLA 242
           +SKDGTI+HWDV SGK +KY WPSDE+L+ HG K  + R   HS+ +L+LAVSSDGRYLA
Sbjct: 187 ASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNKNHSRESLALAVSSDGRYLA 246

Query: 243 SGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAY 302
           +GG+DRHVHIWD RTREH+QAFPGHR  VSCL FR GTSEL+SGS+DRTVK+WNV+D+A+
Sbjct: 247 TGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAF 306

Query: 303 INTLFGHQSEVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISND 362
           I    GHQ E+L ID LRKER LTVGRDR+M   KVPE +R+++RAPASSLE CCFIS++
Sbjct: 307 ITENHGHQGEILAIDALRKERALTVGRDRTMLYHKVPESTRMIYRAPASSLESCCFISDN 366

Query: 363 EFLSGSDDGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD----- 422
           E+LSGSD+G++ LW  LKKKPVF+ +NAH             +G   NG + NGD     
Sbjct: 367 EYLSGSDNGTVALWGMLKKKPVFVFKNAHQDI---------PDGITTNGILENGDHEPVN 426

Query: 423 -SLSAYSWVSSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFA 482
            + SA SWV++V+  R SDLAASGAGNG VRLWA+ ++   ++PLY+LPL GFVNSL FA
Sbjct: 427 NNCSANSWVNAVATSRGSDLAASGAGNGFVRLWAVETNA--IRPLYELPLTGFVNSLAFA 486

Query: 483 KSGRFVVAGVGQEPRLGRWGRIPDARNGVAVHPLKLS 499
           KSG+F++AGVGQE R GRWG +  A+NGVA+HPL+L+
Sbjct: 487 KSGKFLIAGVGQETRFGRWGCLKSAQNGVAIHPLRLA 504

[Close]

BLAST of Lsi08G001630 vs. TAIR10
Match: AT4G21130.1 (AT4G21130.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 547.0 bits (1408), Expect = 1.2e-155
Identity = 287/491 (58.45%), Postives = 364/491 (74.13%), Query Frame = 1


Query: 12  GAKK-GKNFPLSKDPFFSSESRKRRKIV---DDEIESGESDEDNALVGVEDEEFEEETVD 71
           GAK+ GK   +  DPF   E+ KRRK     DD+IES ES+E+  +    ++EF  ETV 
Sbjct: 10  GAKRRGKKSSIDHDPFLEEETEKRRKFNYDDDDDIESVESEEEGKVGEEVEDEFAHETVG 69

Query: 72  EKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQLEDSGRLR 131
           EKRKR+A + L +I E  +RE E ++EE D+        +DSLVA+ L QEQLE SGR+R
Sbjct: 70  EKRKRLAEDTLNRIEEAKQREHEEDNEEDDDF-------RDSLVAKTLMQEQLEKSGRVR 129

Query: 132 REIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVDSGKGEKY 191
           R  A RVQ   + D+F+ ++KH+ SVT VALS+DD +GFS SKDGTILHWDV SGK ++Y
Sbjct: 130 RANALRVQDLQSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWDVSSGKSDEY 189

Query: 192 QWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRTREHIQ 251
           +WPSDEVL+ HG K  +   TRH+K +L+LAVSSDGRYLA+GG+D HVH+WD RTREH+Q
Sbjct: 190 KWPSDEVLKSHGLKFQESWYTRHNKQSLALAVSSDGRYLATGGVDCHVHLWDIRTREHVQ 249

Query: 252 AFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLTIDCLRKE 311
           AF GH G VS L FR+GT+ELFSGSYD T+ IWN + R YI + FGHQSE+L+ID L +E
Sbjct: 250 AFTGHCGIVSSLCFREGTAELFSGSYDGTLSIWNAEHRTYIESCFGHQSELLSIDALGRE 309

Query: 312 RLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWTALKKK 371
           R+L+VGRDR+MQL+KVPE +RL++RA  S+ ECCCF+++DEFLSGSD+GSI LW+ LKKK
Sbjct: 310 RVLSVGRDRTMQLYKVPESTRLIYRASESNFECCCFVNSDEFLSGSDNGSIALWSILKKK 369

Query: 372 PVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGDSLSAYSWVSSVSVCRNSDLAASGAG 431
           PVFI  NAH          + ++ +V + C        A SWVSSV+VCR S+LAASGAG
Sbjct: 370 PVFIVNNAHH--------VIADHDSVNHNC------TPACSWVSSVAVCRGSELAASGAG 429

Query: 432 NGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQEPRLGRWGRIPDAR 491
           NG VRLW + S    ++PLY+LPL GFVNSL FAKSGRF++AGVGQEPRLGRWG +  A+
Sbjct: 430 NGCVRLWGVESGSSAIQPLYELPLPGFVNSLAFAKSGRFLIAGVGQEPRLGRWGCLKSAQ 479

Query: 492 NGVAVHPLKLS 499
           NGVA+HPL+LS
Sbjct: 490 NGVAIHPLRLS 479

[Close]

BLAST of Lsi08G001630 vs. TAIR10
Match: AT1G48630.1 (AT1G48630.1 receptor for activated C kinase 1B)

HSP 1 Score: 104.0 bits (258), Expect = 2.7e-22
Identity = 77/293 (26.28%), Postives = 125/293 (42.66%), Query Frame = 1


Query: 149 HRQSVTAVALSEDDLKGFSSSKDGTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRAT 208
           H   V  V LS D     S S DG +  WD+ +G+  +                   R  
Sbjct: 62  HSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTR-------------------RFV 121

Query: 209 RHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT--RTREHIQAFPGHRGPVSCLTFRQGT- 268
            H+K  LS+A S+D R + S   DR + +W+T    +  I    GH+  VSC+ F   T 
Sbjct: 122 GHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTL 181

Query: 269 -SELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLTIDCLRKERL-LTVGRDRSMQLWKV 328
              + S S+D+TVK+WN+ +    NTL GH   + T+       L  + G+D  + LW +
Sbjct: 182 VPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL 241

Query: 329 PEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWTALKKKPVFIAQNAHPSSSSSM 388
            E  +L      S +   CF  N  +L  + + SI +W    K  V             +
Sbjct: 242 AEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVV-----------EDL 301

Query: 389 NLELKENGAVPNGCMGNGDSLSAYSWVSSVSVCRNSDLAASGAGNGSVRLWAL 437
            ++LK      +G  G G+      + +S++   + +   SG  +G +R+W +
Sbjct: 302 KVDLKAEAEKTDGSTGIGNKTKVI-YCTSLNWSADGNTLFSGYTDGVIRVWGI 323

[Close]

BLAST of Lsi08G001630 vs. TAIR10
Match: AT3G18130.1 (AT3G18130.1 receptor for activated C kinase 1C)

HSP 1 Score: 102.1 bits (253), Expect = 1.0e-21
Identity = 78/296 (26.35%), Postives = 125/296 (42.23%), Query Frame = 1


Query: 146 LIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQG 205
           L  H   V  V LS D     S S DG +  WD+ +G+  +                   
Sbjct: 59  LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTR------------------- 118

Query: 206 RATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT--RTREHIQAFPGHRGPVSCLTFRQ 265
           R   H+K  LS+A S+D R + S   DR + +W+T    +  I    GH+  VSC+ F  
Sbjct: 119 RFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSP 178

Query: 266 GT--SELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLTIDCLRKERL-LTVGRDRSMQL 325
            T    + S S+D+TVK+WN+ +    N+L GH   + T+       L  + G+D  + L
Sbjct: 179 NTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILL 238

Query: 326 WKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWTALKKKPVFIAQNAHPSSS 385
           W + E  +L      S +   CF  N  +L  + + SI +W    K  V           
Sbjct: 239 WDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSIRIWDLESKSVV----------- 298

Query: 386 SSMNLELKENGAVPNGCMGNGDSLSAYSWVSSVSVCRNSDLAASGAGNGSVRLWAL 437
             + ++LK       G +G G+      + +S++   +     SG  +G VR+W +
Sbjct: 299 EDLKVDLKSEAEKNEGGVGTGNQKKVI-YCTSLNWSADGSTLFSGYTDGVVRVWGI 323

[Close]

BLAST of Lsi08G001630 vs. TAIR10
Match: AT5G16750.1 (AT5G16750.1 Transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 75.9 bits (185), Expect = 8.0e-14
Identity = 66/273 (24.18%), Postives = 120/273 (43.96%), Query Frame = 1


Query: 210 HSKVTLSL--AVSSDGRYL-ASGGLDRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTS 269
           H +V LSL   VSS G  L  +G  D+ V +W+  ++  I    GH G +  + F + + 
Sbjct: 400 HKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSF 459

Query: 270 ELF-SGSYDRTVKIWNV-----DDRAYIN-----TLFGHQSEVLTIDCLRKERLLTVG-R 329
             F SGS DRT+K+W++     D    IN      +  H  ++ ++   R + L+  G  
Sbjct: 460 SFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSE 519

Query: 330 DRSMQLWKVPE---------ESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELW---- 389
           DR+  +W++P+           R +F    S+++ C        ++ S D ++++W    
Sbjct: 520 DRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQC-------VMTASGDKTVKIWAISD 579

Query: 390 ----------TALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGDSLSAYSWVS 443
                     T+   +  FI       S  +  L LK      + C+   D      W  
Sbjct: 580 GSCLKTFEGHTSSVLRASFITDGTQFVSCGADGL-LKLWNVNTSECIATYDQHEDKVW-- 639

[Close]

BLAST of Lsi08G001630 vs. NCBI nr
Match: gi|778707751|ref|XP_011656049.1| (PREDICTED: U3 small nucleolar RNA-interacting protein 2 [Cucumis sativus])

HSP 1 Score: 927.5 bits (2396), Expect = 9.5e-267
Identity = 473/505 (93.66%), Postives = 485/505 (96.04%), Query Frame = 1


Query: 1   MPKKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVGVEDEE 60
           M KKK SAPP GAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDN L+GVEDEE
Sbjct: 1   MTKKKTSAPPNGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNGLMGVEDEE 60

Query: 61  FEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQL 120
           FEEETVDEKRKRVA+EYLEKIREIAKREKER DEEKDEDES DEGEKDSLVA+ILQQEQL
Sbjct: 61  FEEETVDEKRKRVAVEYLEKIREIAKREKERGDEEKDEDESDDEGEKDSLVAKILQQEQL 120

Query: 121 EDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVD 180
           EDSGRLRREIASRVQKPVARDEFQ LIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDV+
Sbjct: 121 EDSGRLRREIASRVQKPVARDEFQLLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVE 180

Query: 181 SGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDT 240
           SGKGEKY+WPSDEVLRLHGAKDPQGRAT+HSKVT SLAVSSDGRYLASGGLDRHVHIWDT
Sbjct: 181 SGKGEKYRWPSDEVLRLHGAKDPQGRATKHSKVTFSLAVSSDGRYLASGGLDRHVHIWDT 240

Query: 241 RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLT 300
           RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQS+VLT
Sbjct: 241 RTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSDVLT 300

Query: 301 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL 360
           IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL
Sbjct: 301 IDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIEL 360

Query: 361 WTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD-------SLSAYSWVSSV 420
           WTALKKKPVFI +NAH SSSSS NLELKENGA+PNGCMGNGD       +LSAYSW+SSV
Sbjct: 361 WTALKKKPVFIVRNAHSSSSSSTNLELKENGAIPNGCMGNGDANHNTSHNLSAYSWISSV 420

Query: 421 SVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQ 480
           SVCRNSDLAASGAGNGSVRLWALTSDKKDV+PLYDLPLVGFVNSLTFA SGRFVVAGVGQ
Sbjct: 421 SVCRNSDLAASGAGNGSVRLWALTSDKKDVRPLYDLPLVGFVNSLTFANSGRFVVAGVGQ 480

Query: 481 EPRLGRWGRIPDARNGVAVHPLKLS 499
           EPRLGRWGRIP ARNGVAVHPLKLS
Sbjct: 481 EPRLGRWGRIPAARNGVAVHPLKLS 505

[Close]

BLAST of Lsi08G001630 vs. NCBI nr
Match: gi|659119177|ref|XP_008459515.1| (PREDICTED: U3 small nucleolar RNA-interacting protein 2-like [Cucumis melo])

HSP 1 Score: 920.2 bits (2377), Expect = 1.5e-264
Identity = 471/503 (93.64%), Postives = 480/503 (95.43%), Query Frame = 1


Query: 3   KKKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVGVEDEEFE 62
           KKK SAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDN LVGVEDEEFE
Sbjct: 2   KKKSSAPPKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNGLVGVEDEEFE 61

Query: 63  EETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLVAQILQQEQLED 122
           EETVDEKRKRVA+EYLEKIREIA REKER DEEKDED S DEGEKD LVAQILQQEQLED
Sbjct: 62  EETVDEKRKRVAVEYLEKIREIANREKERGDEEKDEDASDDEGEKDLLVAQILQQEQLED 121

Query: 123 SGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVDSG 182
           SGRLRREIASRVQKPVA+DEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDV+SG
Sbjct: 122 SGRLRREIASRVQKPVAKDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTILHWDVESG 181

Query: 183 KGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRT 242
           KGEKYQWPSDEVLRLHGAKDPQGRAT+HSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRT
Sbjct: 182 KGEKYQWPSDEVLRLHGAKDPQGRATKHSKVTLSLAVSSDGRYLASGGLDRHVHIWDTRT 241

Query: 243 REHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLTID 302
           REHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVL ID
Sbjct: 242 REHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGHQSEVLAID 301

Query: 303 CLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSDDGSIELWT 362
           CLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLE CCFISNDEFLSGSDDGSIELWT
Sbjct: 302 CLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLESCCFISNDEFLSGSDDGSIELWT 361

Query: 363 ALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD-------SLSAYSWVSSVSV 422
            LKKKPVFI +NAH SSSSS NLELKENG +PNGCMGNGD       +LSAYSW+SSVSV
Sbjct: 362 VLKKKPVFIVRNAHSSSSSSTNLELKENGVIPNGCMGNGDTNHNTSHNLSAYSWISSVSV 421

Query: 423 CRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFVVAGVGQEP 482
           CRNSDLAASGAGNGSVRLWALTSDKKDV+PLYDLPLVGFVNSLTFA SGRFVVAGVGQEP
Sbjct: 422 CRNSDLAASGAGNGSVRLWALTSDKKDVRPLYDLPLVGFVNSLTFANSGRFVVAGVGQEP 481

Query: 483 RLGRWGRIPDARNGVAVHPLKLS 499
           RLGRWGRIP ARNGVAVHPLKLS
Sbjct: 482 RLGRWGRIPAARNGVAVHPLKLS 504

[Close]

BLAST of Lsi08G001630 vs. NCBI nr
Match: gi|645238244|ref|XP_008225587.1| (PREDICTED: U3 small nucleolar RNA-interacting protein 2-like [Prunus mume])

HSP 1 Score: 719.2 bits (1855), Expect = 5.1e-204
Identity = 372/514 (72.37%), Postives = 429/514 (83.46%), Query Frame = 1


Query: 3   KKKISAP--PKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVG----- 62
           KK  SAP  PK AKK K + L++D FFS+ES+KRRKI  DEIES +SD+D  +VG     
Sbjct: 5   KKGGSAPKGPKAAKKSKTYSLNEDSFFSTESKKRRKIDRDEIES-DSDDDYGVVGSDGEG 64

Query: 63  ----VEDEEFEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLV 122
                E+ E  EET DEKRKR+A EYLEK+R +A+REKE E++E DE E   EGE+DSLV
Sbjct: 65  GGEEAEEAEAIEETADEKRKRIAQEYLEKVRGLARREKEEEEDESDE-EGEKEGERDSLV 124

Query: 123 AQILQQEQLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKD 182
           A+ILQQ+QLEDSGR+RR IASRVQKP + DEF+  +KHRQSVTAVALSEDD KGFS+SKD
Sbjct: 125 AKILQQQQLEDSGRVRRAIASRVQKPESTDEFRISVKHRQSVTAVALSEDDFKGFSASKD 184

Query: 183 GTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGL 242
           GTILHWDVDSGK E+Y WP DEVL+ HG KDPQGRAT+HSK  L+LAVSSDGRYLASGGL
Sbjct: 185 GTILHWDVDSGKSERYLWPRDEVLKSHGVKDPQGRATKHSKHVLALAVSSDGRYLASGGL 244

Query: 243 DRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTL 302
           DRH+H+WDTRT+EHIQAFPGHRGPVSCLTFRQG SELFSGSYDRTVKIWNV+DRAYI+TL
Sbjct: 245 DRHIHLWDTRTQEHIQAFPGHRGPVSCLTFRQGASELFSGSYDRTVKIWNVEDRAYIDTL 304

Query: 303 FGHQSEVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLS 362
           FGHQ EVL+IDCLRKER+L+VG DRSMQL+KVPE SRLVFRAPASSLECCCFISND+FLS
Sbjct: 305 FGHQGEVLSIDCLRKERVLSVGHDRSMQLFKVPEASRLVFRAPASSLECCCFISNDDFLS 364

Query: 363 GSDDGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGDSL------- 422
           GSDDGS+ELW+ L+KKPV I +NAHP  ++  N+E K+   +PNG + NGD         
Sbjct: 365 GSDDGSVELWSMLRKKPVCIVKNAHPFLAARKNVEQKDGDRIPNGHIENGDHTSQSYDCS 424

Query: 423 SAYSWVSSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSG 482
           S YSW+SSV+VCR SDLAASGAGNGSVRLWA+ S+ K +KPL+DLPLVGFVNSL FAKSG
Sbjct: 425 STYSWISSVTVCRGSDLAASGAGNGSVRLWAIESESKAMKPLHDLPLVGFVNSLAFAKSG 484

Query: 483 RFVVAGVGQEPRLGRWGRIPDARNGVAVHPLKLS 499
            F+VAGVG+EPRLGRWG I  ARNG+A+HPLKLS
Sbjct: 485 GFLVAGVGKEPRLGRWGHISSARNGIAIHPLKLS 516

[Close]

BLAST of Lsi08G001630 vs. NCBI nr
Match: gi|595902328|ref|XP_007213920.1| (hypothetical protein PRUPE_ppa004203mg [Prunus persica])

HSP 1 Score: 717.2 bits (1850), Expect = 1.9e-203
Identity = 372/514 (72.37%), Postives = 429/514 (83.46%), Query Frame = 1


Query: 3   KKKISAP--PKGAKKGKNFPLSKDPFFSSESRKRRKIVDDEIESGESDEDNALVG----- 62
           KK  SAP  PKGAKK K + L++D FFS+ES+KRRKI  DEIES +SD+D  +VG     
Sbjct: 5   KKGGSAPKGPKGAKKSKTYSLNEDSFFSTESKKRRKIDRDEIES-DSDDDYGVVGSDGEG 64

Query: 63  ----VEDEEFEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGDEGEKDSLV 122
                E+ E  EET DEKRKR+A EYLEK+R +A+REKE E++E DE E   EGE+DSLV
Sbjct: 65  GGEEAEEAEAIEETADEKRKRIAQEYLEKVRGLARREKEDEEDESDE-EGEKEGERDSLV 124

Query: 123 AQILQQEQLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKD 182
           A+ILQQ+QLEDSGR+RR IASRVQKP + DEF+  +KHRQSVTAVALSEDD KGFS+SKD
Sbjct: 125 AKILQQQQLEDSGRVRRAIASRVQKPESTDEFRISVKHRQSVTAVALSEDDFKGFSASKD 184

Query: 183 GTILHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGL 242
           GTILHWDVDSGK EKY WP +EVL+ HG KDPQGRAT+HSK  L+LAVSSDGRYLASGGL
Sbjct: 185 GTILHWDVDSGKSEKYLWPRNEVLKSHGVKDPQGRATKHSKHVLALAVSSDGRYLASGGL 244

Query: 243 DRHVHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTL 302
           DRH+H+WDTRTREHIQAFPGHRGPVSCLTFRQG SELFSGSYDRTVKIWNV+ RAYI+TL
Sbjct: 245 DRHIHLWDTRTREHIQAFPGHRGPVSCLTFRQGASELFSGSYDRTVKIWNVEGRAYIDTL 304

Query: 303 FGHQSEVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLS 362
           FGHQ EVL+IDCLRKER+L+VG DRSMQL+KVPE SRLVFRAPASSLECCCFISND+FLS
Sbjct: 305 FGHQGEVLSIDCLRKERVLSVGHDRSMQLFKVPEASRLVFRAPASSLECCCFISNDDFLS 364

Query: 363 GSDDGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGDSL------- 422
           GSDDGS+ELW+ L+KKPV I +NAHP  ++  N+E K+   +PNG + NGD         
Sbjct: 365 GSDDGSVELWSMLRKKPVCIVKNAHPFLAARKNVEQKDGDRIPNGHIENGDHTSQSYHCS 424

Query: 423 SAYSWVSSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSG 482
           S YSW+SSV+VCR SDLAASGAGNGSVRLWA+ S+ + +KPL+DLPLVGFVNSL FAKSG
Sbjct: 425 STYSWISSVTVCRGSDLAASGAGNGSVRLWAVESESRAMKPLHDLPLVGFVNSLAFAKSG 484

Query: 483 RFVVAGVGQEPRLGRWGRIPDARNGVAVHPLKLS 499
            F+VAGVG+EPRLGRWG I  ARNG+A+HPLKLS
Sbjct: 485 GFLVAGVGKEPRLGRWGHISSARNGIAIHPLKLS 516

[Close]

BLAST of Lsi08G001630 vs. NCBI nr
Match: gi|568827913|ref|XP_006468291.1| (PREDICTED: U3 snoRNP-associated protein-like EMB2271 [Citrus sinensis])

HSP 1 Score: 708.4 bits (1827), Expect = 9.0e-201
Identity = 374/511 (73.19%), Postives = 427/511 (83.56%), Query Frame = 1


Query: 4   KKISAPPKGAKKGKNFPLSKDPFFSSESRKRRKIV--DDEIESGESD------EDNALVG 63
           KK    P+G  KGK F +++DPFF+ E +KRRKI   DD+IES +S+      E +    
Sbjct: 7   KKKGPAPRG--KGK-FSINQDPFFAGEPKKRRKIDYDDDDIESADSEDYDDEVEKSGPEE 66

Query: 64  VEDEEFEEETVDEKRKRVAIEYLEKIREIAKREKEREDEEKDEDESGD-EGEKDSLVAQI 123
            E EE EEET DEKRKRVA  YLEKIREIA+REKE E++  +  E G+ EGE+DSLVA+I
Sbjct: 67  SEGEEEEEETADEKRKRVATAYLEKIREIARREKEEEEDGDEGREVGEKEGERDSLVAKI 126

Query: 124 LQQEQLEDSGRLRREIASRVQKPVARDEFQFLIKHRQSVTAVALSEDDLKGFSSSKDGTI 183
           LQQEQLE+SGR+RR IASRVQKP A DEF+ L+KHRQSVTAVALSEDD KGFS+SKDG+I
Sbjct: 127 LQQEQLEESGRVRRVIASRVQKPEATDEFRVLLKHRQSVTAVALSEDDSKGFSASKDGSI 186

Query: 184 LHWDVDSGKGEKYQWPSDEVLRLHGAKDPQGRATRHSKVTLSLAVSSDGRYLASGGLDRH 243
           LHWDV SGKG KY WPS+EVL+ HGAKDPQGRAT+ SK  L+LAVSSDGRYLASGGLDRH
Sbjct: 187 LHWDVSSGKGVKYLWPSEEVLKSHGAKDPQGRATKQSKHILALAVSSDGRYLASGGLDRH 246

Query: 244 VHIWDTRTREHIQAFPGHRGPVSCLTFRQGTSELFSGSYDRTVKIWNVDDRAYINTLFGH 303
           +H+WDTR +EHIQAFPGHRGPVSCLTFRQGTSELFSGS+DRTVKIWN +DRAYI+TLFGH
Sbjct: 247 IHLWDTRIQEHIQAFPGHRGPVSCLTFRQGTSELFSGSFDRTVKIWNAEDRAYISTLFGH 306

Query: 304 QSEVLTIDCLRKERLLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSD 363
           QSEVLTIDCLRKER+LTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSD
Sbjct: 307 QSEVLTIDCLRKERVLTVGRDRSMQLWKVPEESRLVFRAPASSLECCCFISNDEFLSGSD 366

Query: 364 DGSIELWTALKKKPVFIAQNAHPSSSSSMNLELKENGAVPNGCMGNGD-------SLSAY 423
           DGSIELW+ L+KKPV+I +NAHP      N E ++ G + NG   NG+       S SAY
Sbjct: 367 DGSIELWSLLRKKPVYIVKNAHPLLDGLKNFE-QDEGKISNGHSENGNLNPGSYHSSSAY 426

Query: 424 SWVSSVSVCRNSDLAASGAGNGSVRLWALTSDKKDVKPLYDLPLVGFVNSLTFAKSGRFV 483
           SWVSSV+VC  SDLAASGAGNGSVRLWA+ S+ KD++PLY+LPLVGFVNSL FAKSG+F+
Sbjct: 427 SWVSSVTVCGGSDLAASGAGNGSVRLWAIESETKDIQPLYNLPLVGFVNSLAFAKSGQFL 486

Query: 484 VAGVGQEPRLGRWGRIPDARNGVAVHPLKLS 499
           +AGVGQEPRLGRWG +P ARNGV VHP+KLS
Sbjct: 487 IAGVGQEPRLGRWGHLPAARNGVLVHPIKLS 513

The following BLAST results are available for this feature:

BLAST of Lsi08G001630 vs. Swiss-Prot


Match Name	E-value	Identity	Description
YAO_ARATH	1.0e-156	57.83	U3 snoRNP-associated protein-like YAO OS=Arabidopsis thaliana GN=YAO PE=2 SV=1	[more]
YAOL_ARATH	2.2e-154	58.45	U3 snoRNP-associated protein-like EMB2271 OS=Arabidopsis thaliana GN=EMB2271 PE=...	[more]
YAO_ORYSJ	6.8e-148	54.90	U3 snoRNP-associated protein-like YAOH OS=Oryza sativa subsp. japonica GN=Os03g0...	[more]
U3IP2_MOUSE	9.0e-84	39.91	U3 small nucleolar RNA-interacting protein 2 OS=Mus musculus GN=Rrp9 PE=1 SV=1	[more]
U3IP2_HUMAN	2.7e-80	37.97	U3 small nucleolar RNA-interacting protein 2 OS=Homo sapiens GN=RRP9 PE=1 SV=1	[more]

BLAST of Lsi08G001630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSP4_CUCSA	6.6e-267	93.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G647380 PE=4 SV=1	[more]
M5WN42_PRUPE	1.4e-203	72.37	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004203mg PE=4 SV=1	[more]
A0A067GIZ6_CITSI	6.3e-201	73.19	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g010296mg PE=4 SV=1	[more]
V4TNW7_9ROSI	2.4e-200	72.99	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10014949mg PE=4 SV=1	[more]
W9R7L4_9ROSA	9.4e-197	70.10	U3 small nucleolar RNA-interacting protein 2 OS=Morus notabilis GN=L484_026018 P...	[more]

BLAST of Lsi08G001630 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G05410.1	5.9e-158	57.83	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G21130.1	1.2e-155	58.45	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G48630.1	2.7e-22	26.28	receptor for activated C kinase 1B	[more]
AT3G18130.1	1.0e-21	26.35	receptor for activated C kinase 1C	[more]
AT5G16750.1	8.0e-14	24.18	Transducin family protein / WD-40 repeat family protein	[more]

BLAST of Lsi08G001630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778707751\|ref\|XP_011656049.1\|	9.5e-267	93.66	PREDICTED: U3 small nucleolar RNA-interacting protein 2 [Cucumis sativus]	[more]
gi\|659119177\|ref\|XP_008459515.1\|	1.5e-264	93.64	PREDICTED: U3 small nucleolar RNA-interacting protein 2-like [Cucumis melo]	[more]
gi\|645238244\|ref\|XP_008225587.1\|	5.1e-204	72.37	PREDICTED: U3 small nucleolar RNA-interacting protein 2-like [Prunus mume]	[more]
gi\|595902328\|ref\|XP_007213920.1\|	1.9e-203	72.37	hypothetical protein PRUPE_ppa004203mg [Prunus persica]	[more]
gi\|568827913\|ref\|XP_006468291.1\|	9.0e-201	73.19	PREDICTED: U3 snoRNP-associated protein-like EMB2271 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR020472	G-protein_beta_WD-40_rep
IPR019775	WD40_repeat_CS
IPR017986	WD40_repeat_dom
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR001680	WD40_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
biological_process	GO:0008150	biological_process
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0030515	snoRNA binding
molecular_function	GO:0034511	U3 snoRNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi08G001630.1	Lsi08G001630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 331..361 score: 0.0071coord: 210..239 score: 1.2E-5coord: 244..281 score: 5.5E-6coord: 404..434 score: 0
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 284..322 score: 0.059coord: 200..239 score: 2.0E-5coord: 140..178 score: 0.016coord: 400..435 score: 0.3coord: 242..281 score: 1.7E-8coord: 324..362 score: 0
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 146..187 score: 11.043coord: 207..248 score: 13.516coord: 249..290 score: 14
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	G3DSA:2.130.10.10		coord: 144..470 score: 2.9
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 146..371 score: 33
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 142..370 score: 4.4E-51coord: 403..470 score: 4.4
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 226..240 score: -coord: 268..282 scor
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 349..363 score: 1.1E-6coord: 226..240 score: 1.1E-6coord: 268..282 score: 1.
None	No IPR available	unknown	Coil	Coil	coord: 75..98 scor
None	No IPR available	PANTHER	PTHR19865	U3 SMALL NUCLEOLAR RNA INTERACTING PROTEIN 2	coord: 3..498 score: 3.3E
None	No IPR available	PANTHER	PTHR19865:SF0	U3 SMALL NUCLEOLAR RNA-INTERACTING PROTEIN 2	coord: 3..498 score: 3.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi08G001630	Csa5G647380	Cucumber (Chinese Long) v2	culsiB391
Lsi08G001630	CSPI05G30460	Wild cucumber (PI 183967)	cpilsiB395
Lsi08G001630	Cucsa.237680	Cucumber (Gy14) v1	cgylsiB389
Lsi08G001630	Cla012407	Watermelon (97103) v1	lsiwmB467
Lsi08G001630	MELO3C022131	Melon (DHL92) v3.5.1	lsimeB461
Lsi08G001630	ClCG08G001610	Watermelon (Charleston Gray)	lsiwcgB440
Lsi08G001630	MELO3C022131.2	Melon (DHL92) v3.6.1	lsimedB479
Lsi08G001630	Cla97C08G145780	Watermelon (97103) v2	lsiwmbB445
Lsi08G001630	Bhi06G000137	Wax gourd	lsiwgoB586
Lsi08G001630	CsGy5G029850	Cucumber (Gy14) v2	cgyblsiB358
Lsi08G001630	CsaV3_5G039540	Cucumber (Chinese Long) v3	cuclsiB414

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi08G001630	Cucurbita maxima (Rimu)	cmalsiB453
Lsi08G001630	Cucurbita moschata (Rifu)	cmolsiB440
Lsi08G001630	Cucurbita pepo (Zucchini)	cpelsiB479
Lsi08G001630	Cucurbita pepo (Zucchini)	cpelsiB650
Lsi08G001630	Cucumber (Chinese Long) v2	culsiB392
Lsi08G001630	Watermelon (Charleston Gray)	lsiwcgB442
Lsi08G001630	Watermelon (97103) v1	lsiwmB473
Lsi08G001630	Melon (DHL92) v3.6.1	lsimedB480
Lsi08G001630	Cucumber (Chinese Long) v3	cuclsiB415