Lsi08G001260 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAGCAGCCTCACTTTGCAACTCAAGGAAACCATTCCTTCTTTCCTTCAAAAGGATTTAAAGGTCCATTATCTCTCTCTCTCTTTCTTAATACTATTTCTTGTAGAATCTCTTTCTTTATTGTTGTTATGCATTTCCTCATTAATTAATATTCTTTCTCTTATGCTTAATGCATTCAATCATGGGTTAATATATCATTTGGTACCTATTTAGTTTTTAGTTATGAAAATTAACCCTATAAACACCTTTTTCTTATCTAAATTTCTTGCCTTTGTTATCTACCTTTCTACCAATGTTTTAAAAAACAAAACTAAATTTGGAAAACTAAAAAAAGTAGTTATTAATTTATTTATTTTTTTAATTAGAATTTGGTTAAAAATTCAACTATTAGCTTTTACTTAATAAAGATAAAACCATTATAGGCTTAATTTTAAAAAACCAAGTTTCCAATCAAGGTCTAAATTAATACATTTGCTTGCAACCTCTCTTTCGCCAAGGATTATTTGATGACATTAGAAATTATGGTGGATAATTTTATATTGTTAGATATACGAGAGAGACCAAAAATTATGATTTAACCATGTTTTATATGGAGCATGCAGCCACATTCAATAGACCTTCCTCTAATTTTCTCATTCTTATGCATATTATTAGACCATTCCTTAATTTTCTCATACTTATTATTCTTATACATTAACTAATCAAATTACTTAACATTTTCACAGGATCGATTTGGAAATACGTTTGACTTTATTATTCCAAGGCAAAACTTCCCCCAGCTGTTTAATGAAACTTCTCCAAAGAAATATACAAGCATCCAACTGCCTCCAAATTTGTATACTAATAATGATTGGATGGGATTTGGAGTTTGCACACTCTTCCAAATCAACAAACATCCAACAGCAATTCTCAACAATCTTGGTTCAGTTTCAAGGCATGAACTCATTTGTCATTTTGCAATTGAGAATGGACTAATTGAACCATTACACGTTCATAGGATCACTGAGGACAGATTGATTTGGCTACATGAACGCCAGTTTGTTTGGCTTTATTACAGCCCAAGAAACATATATGGTAACATTTTTCGCCACAGGTCATATGTTTGTGCTATTATTGAAGCTGATACCCCTGACTTGATGGTAAGATGTAGTGGACTTCAATTAATGTACAAGCAAGATGTGGAAGTGATTGACAAGATATTGATGGAAGCCATACAATCGTAA ATGGAAAGCAGCCTCACTTTGCAACTCAAGGAAACCATTCCTTCTTTCCTTCAAAAGGATTTAAAGGATCGATTTGGAAATACGTTTGACTTTATTATTCCAAGGCAAAACTTCCCCCAGCTGTTTAATGAAACTTCTCCAAAGAAATATACAAGCATCCAACTGCCTCCAAATTTGTATACTAATAATGATTGGATGGGATTTGGAGTTTGCACACTCTTCCAAATCAACAAACATCCAACAGCAATTCTCAACAATCTTGGTTCAGTTTCAAGGCATGAACTCATTTGTCATTTTGCAATTGAGAATGGACTAATTGAACCATTACACGTTCATAGGATCACTGAGGACAGATTGATTTGGCTACATGAACGCCAGTTTGTTTGGCTTTATTACAGCCCAAGAAACATATATGGTAACATTTTTCGCCACAGGTCATATGTTTGTGCTATTATTGAAGCTGATACCCCTGACTTGATGGTAAGATGTAGTGGACTTCAATTAATGTACAAGCAAGATGTGGAAGTGATTGACAAGATATTGATGGAAGCCATACAATCGTAA ATGGAAAGCAGCCTCACTTTGCAACTCAAGGAAACCATTCCTTCTTTCCTTCAAAAGGATTTAAAGGATCGATTTGGAAATACGTTTGACTTTATTATTCCAAGGCAAAACTTCCCCCAGCTGTTTAATGAAACTTCTCCAAAGAAATATACAAGCATCCAACTGCCTCCAAATTTGTATACTAATAATGATTGGATGGGATTTGGAGTTTGCACACTCTTCCAAATCAACAAACATCCAACAGCAATTCTCAACAATCTTGGTTCAGTTTCAAGGCATGAACTCATTTGTCATTTTGCAATTGAGAATGGACTAATTGAACCATTACACGTTCATAGGATCACTGAGGACAGATTGATTTGGCTACATGAACGCCAGTTTGTTTGGCTTTATTACAGCCCAAGAAACATATATGGTAACATTTTTCGCCACAGGTCATATGTTTGTGCTATTATTGAAGCTGATACCCCTGACTTGATGGTAAGATGTAGTGGACTTCAATTAATGTACAAGCAAGATGTGGAAGTGATTGACAAGATATTGATGGAAGCCATACAATCGTAA MESSLTLQLKETIPSFLQKDLKDRFGNTFDFIIPRQNFPQLFNETSPKKYTSIQLPPNLYTNNDWMGFGVCTLFQINKHPTAILNNLGSVSRHELICHFAIENGLIEPLHVHRITEDRLIWLHERQFVWLYYSPRNIYGNIFRHRSYVCAIIEADTPDLMVRCSGLQLMYKQDVEVIDKILMEAIQS
BLAST of Lsi08G001260 vs. TrEMBL
Match: A0A0A0KSR4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648120 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 9.0e-76 Identity = 140/187 (74.87%), Postives = 157/187 (83.96%), Query Frame = 1
BLAST of Lsi08G001260 vs. TrEMBL
Match: A0A0A0KXU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G648130 PE=4 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 8.7e-71 Identity = 129/182 (70.88%), Postives = 152/182 (83.52%), Query Frame = 1
BLAST of Lsi08G001260 vs. TrEMBL
Match: E6YCZ7_9ROSA (Nematode resistance-like protein OS=Prunus cerasifera GN=Ma PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 7.7e-19 Identity = 55/170 (32.35%), Postives = 86/170 (50.59%), Query Frame = 1
BLAST of Lsi08G001260 vs. TrEMBL
Match: W9QV01_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022553 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 8.0e-16 Identity = 53/184 (28.80%), Postives = 94/184 (51.09%), Query Frame = 1
BLAST of Lsi08G001260 vs. TrEMBL
Match: M5WLW5_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020500mg PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 4.0e-15 Identity = 43/123 (34.96%), Postives = 68/123 (55.28%), Query Frame = 1
BLAST of Lsi08G001260 vs. NCBI nr
Match: gi|659127202|ref|XP_008463577.1| (PREDICTED: TMV resistance protein N-like [Cucumis melo]) HSP 1 Score: 295.8 bits (756), Expect = 5.2e-77 Identity = 143/188 (76.06%), Postives = 159/188 (84.57%), Query Frame = 1
BLAST of Lsi08G001260 vs. NCBI nr
Match: gi|778707827|ref|XP_011656067.1| (PREDICTED: TMV resistance protein N-like isoform X1 [Cucumis sativus]) HSP 1 Score: 291.2 bits (744), Expect = 1.3e-75 Identity = 140/187 (74.87%), Postives = 157/187 (83.96%), Query Frame = 1
BLAST of Lsi08G001260 vs. NCBI nr
Match: gi|700197463|gb|KGN52640.1| (hypothetical protein Csa_5G648120 [Cucumis sativus]) HSP 1 Score: 291.2 bits (744), Expect = 1.3e-75 Identity = 140/187 (74.87%), Postives = 157/187 (83.96%), Query Frame = 1
BLAST of Lsi08G001260 vs. NCBI nr
Match: gi|659119240|ref|XP_008459549.1| (PREDICTED: uncharacterized protein LOC103498653 [Cucumis melo]) HSP 1 Score: 290.0 bits (741), Expect = 2.9e-75 Identity = 138/187 (73.80%), Postives = 157/187 (83.96%), Query Frame = 1
BLAST of Lsi08G001260 vs. NCBI nr
Match: gi|778707833|ref|XP_011656069.1| (PREDICTED: uncharacterized protein LOC105435623 [Cucumis sativus]) HSP 1 Score: 274.6 bits (701), Expect = 1.3e-70 Identity = 129/182 (70.88%), Postives = 152/182 (83.52%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |