Lsi08G000360 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAGTACAAAAATTAGTACTCTTTTTCAAATACTGTGTGGTTGTTTCCCTTTAAAAACTTGAAAGAAAGTTTTGAAAGGAAAAACACACAAACGAAGCGAAAGGTAAAGCAAACCCATTCTAAAATAGATTAAAAAAAAAAAAAAGTGTGGAGCGTCACCATCTGAACAGAATTCCCAAGTGCTTAGTGGAAATCAGTCAGCTCCGGTATGATCATCAATGGCAATGGCAGTACGATATATGTTCTTCTATCTTTGCTTCAAAGCAATCCCCCATGTTCACTTCTCTATTCTCCTTCCCTTTCTTAATCCCACAATGAAATGAAATTCCACAGCTCCACGTTCTCGATTCACATTTTTCCATCATTTTGCGAAATGGGTTCTCTGTTTTCACCTTCATTCTTCTTCTTCTTCCTCCTCCTTCTTCTTCTATCCCAACAATTTTTCCTAAATTTGACCCATTGTTCGCCTCATGAATCGTTGGAGTATATATCCGCCATTGGAGACCCTGGAATGAAGAGCCCAAATGTTAGAGTTGCATTTGAGGCATGGAATTTTTGTAATGAAGTTGGAGCTGAAGCTCCTCGTATGGGCAGCCCCAGATTGGCTGATTGTGCTGATTTGCGAACCCCATTTGCTTCTGGTATGCAATTCTTCTTAGTAACGGTTCCCCTGTTCCGGTTATGGTTTCTAATTTTCATTAACTGAGTATTTATTTGGGTTGGTTTTTAGAAATCTGGATTTCATTTGCTTGAATTTTCTTAATGTTTTGATGTTTCTTGATACTATTTTTAAACATCAGTGAGTTGTTGGCTATTAATATGTACTTGATTCATTGTGAATTTCTTTATCACTGGCTAGTTTCATTTGGAACAGTGGAGAAACGTACTTATTTGACTCTCTTATGAATTCTAGCATGCTGACAGTTCGGAGTTTATTTGGTTAAATATACAACTCTCTTGCTCGGAATCCACATTATAGAGCAAATTATTACGAATTTTTGGCAATACGAATCTTGTGCATATTAGTTAGAAGTGGCAAAGATCTTGAGTTTATACGTAAGGACGGTATCTCTCTTTATACTACACCTTTTGAGTATAATTTAAAAGTTTTAAAAGTGAAGTGACCTGGACTAAGGTTCAAATTGAACAATGTTATATATGTAAAGATGGAGACTCGTTGTCTTAACACCAATAAATGGATTGATGCCACGGTGAGGCGGATACGACTTCAATCTCTCTATTTTTAATTTTAAATGTAACAAAGGTTATGATTATCTAGCTGTTATGAATTTCTCTTAGATCTGTTGCTTTCTAAGAACTAGCAAAACAAGAGTCTTTGTTCTTGGTGTTTAAATTAATAAGCCAATCTGTATTCAATTGCTTTCGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCTTCAGATCAACAAGATTGTTCTGGTCTTGAAAGTGATAGCAACTGTATGGTACTCCAGAAAGTAAATGAATCGGATAATAAACTTGGGGCTGGCGAAAAGTTCCCATCAGAGCGTTTTAAGTCATACCTGGATCCAGATTTGTATGTTGTGGAGAAGGAGCGCTATCTTGGTTCACTATGTGAGGTTCATGATTCTTCGAATCCATGGAGTTTTTGGATGATTATGCTAAAAAATGGGAATTTTGACAAGAACTCTACTCTCTGCCCTGAAAATGGCAAGAAGATTACTAAACTTATAACTGACAGAAAGTTCCCGTGTTTTGGCAAAGGTTGTATGAACCAGCCTCTTGTTTACCATAACTATTCGAGATTGGTGTCTTTCGGCAAACGAATGGTATCTTTAACTGGTGGTTTCTATGGAACCTATGAACTAGATGCTGATCTGAATAATGGTATAGGGAAGAACTCTTACTTTTCGGTCTCCTGGCACAAGAATGTTAGCACAGGGAGTTGGATATTTTCAAATCGATTGACGACATCTTCTAAGTATCCTTGGCTTATGCTGTACCTTCGATCTGATGCAACAACGGGTTTCAATGGTGGATATCACTACGATGGTCGTGGCATTATGAGAAAGGTGCATCATCCATCATTTATTTATTTACTTTTATTTTCAAACTATAGAAATTCAGTAGAGGAGCTTTTCCAGAAGAGTGAACTGACGTTAGACCAACTAAATGATGTTCTAATCAATAATTAAGTTTCACAAGCTTTATAAGCATTTGCTTTCTTCTTTTGTGGTAACAAAAAACTATGTTCTCAATTTGGTGTTCACTGTCTATCGTATAATTTTGAATTCTGATTTTCAGTTGCCCGAATCCCCAAATTTCAAAGTGAGATTAACACTCGACATTAAAAATGGAGGTGGAAAAAACAGCCAATTCTATCTCATTGACATAGGAAGCTGTTGGAAGAACAATGGAGATGCTTGCAACGGCAACACTACTACTGATGTAACTCGATACAGTGAAATGATTATCAACCCCGAAACTAGTAGCTGGTGTAGGCCGAACAATTTTGCGTCGTGTCCGCCTTATCATGTTAGTGTTTCAGGTGAGAAGATATACAGGAATGAGACATCAAGATTTCCATATTCAGCTTATCACCTGTACTGCAGTCCTGGAAATGCTATGCATTTGGAGAAACCATATGACATTTGTGATCCATATAGCAACCCTCAGTCTCAAGAGTTGCTACAAATTCTTCCACATCCTGAATGGGCTGTACATGGCTATCCAGAGAAGCAAGGAGATGGATGGATTGGAGATCCTAGAACTTGGGAGCTTGACGTAGGATCTTTGTCAAACCGCTTATACTTCTACCAGGTAAATCTTCTTTTCCTCCACGATATTGCTTGACATTTTTCCTCACTAAGATGAACTGCAAATGACCTAGGATTCTAAACTGCTTGTTGATCAAATTAAAAATTGAGCATTCTAAACTCATTGTCTAATGAATATCACGCCAAGGTTAAATTACAGATTTAGTTTATGAACATGTTGGTTTTATCTATTTAATTAGTCCCTAAACTGGAAAATATTTCAACTACATTCATAATCTATGAATGATGATTCTATGTGGTTGTTTGGTTTACAACATTAACTAAATAATGATGAGACATGCCTGATATATTATTGATGTGGTAGACAAATTGTGAAAGGCAAAGTGGAAAACTAAACAAAATAAAGCGGCCTGATCTATAAAAGAGATTTGATAAGTTGATGAAAAGAGAGAGCATATCATATGTGTGACTTTTTTTTTTTTTGTTCAATTCTCCACTTTATTCAATCATCAACGAACAAAATGTTTGTTCATTGTTCAATAGGTATGACATGTCATTATTTAGACAAACCATATGAATAGTAGAGACTACATAGGATCACAATTCAATGTCATAAAATTTATAGTTTATAACAAATCTAAGTGGATATGAACTTTGCTGCTTACCTGAATTCAAGCTTAAGGATGATATGAATTTTGATTAGAAACTGAGTTTTTCTTGTAAATGTAGGATCCGGGAACGAAGCCAGCAAGGCGGGTATGGACTTCGATCAACGTCGGTGTAGAAATATATATTAGTGAAGGGGCAACAGCAGAGTGGAGTGTGAGTGATTTTGATGTCATTGTTCCACCAGATGCTAGGGATGCTAATTGCTGCTCTTATTAACTCTCTGCTCTTAACTTATTATGTAATATATCAATTAGCATCATCATGTCAATTTTTCTCTTCATCTTCCCCTTTGGCATCCTTTAAAAATACTTGCCACTTTATTGTTTCAATAACTAGAGGCTCCTTAGGAAGTTCTTCCTTCCTCTCACACAAGCCATTTTACTATAAAATTATGTGTTGTTGATTTAAGGGACTCAATCTAGTCAAGTGTTTATGGCCACAAATATTAAATAAAATAGTAAAGTTTCTATACT TTTAGTACAAAAATTAGTACTCTTTTTCAAATACTGTGTGGTTGTTTCCCTTTAAAAACTTGAAAGAAAGTTTTGAAAGGAAAAACACACAAACGAAGCGAAAGGTAAAGCAAACCCATTCTAAAATAGATTAAAAAAAAAAAAAAGTGTGGAGCGTCACCATCTGAACAGAATTCCCAAGTGCTTAGTGGAAATCAGTCAGCTCCGGTATGATCATCAATGGCAATGGCAGTACGATATATGTTCTTCTATCTTTGCTTCAAAGCAATCCCCCATGTTCACTTCTCTATTCTCCTTCCCTTTCTTAATCCCACAATGAAATGAAATTCCACAGCTCCACGTTCTCGATTCACATTTTTCCATCATTTTGCGAAATGGGTTCTCTGTTTTCACCTTCATTCTTCTTCTTCTTCCTCCTCCTTCTTCTTCTATCCCAACAATTTTTCCTAAATTTGACCCATTGTTCGCCTCATGAATCGTTGGAGTATATATCCGCCATTGGAGACCCTGGAATGAAGAGCCCAAATGTTAGAGTTGCATTTGAGGCATGGAATTTTTGTAATGAAGTTGGAGCTGAAGCTCCTCGTATGGGCAGCCCCAGATTGGCTGATTGTGCTGATTTGCGAACCCCATTTGCTTCTGATCAACAAGATTGTTCTGGTCTTGAAAGTGATAGCAACTGTATGGTACTCCAGAAAGTAAATGAATCGGATAATAAACTTGGGGCTGGCGAAAAGTTCCCATCAGAGCGTTTTAAGTCATACCTGGATCCAGATTTGTATGTTGTGGAGAAGGAGCGCTATCTTGGTTCACTATGTGAGGTTCATGATTCTTCGAATCCATGGAGTTTTTGGATGATTATGCTAAAAAATGGGAATTTTGACAAGAACTCTACTCTCTGCCCTGAAAATGGCAAGAAGATTACTAAACTTATAACTGACAGAAAGTTCCCGTGTTTTGGCAAAGGTTGTATGAACCAGCCTCTTGTTTACCATAACTATTCGAGATTGGTGTCTTTCGGCAAACGAATGGTATCTTTAACTGGTGGTTTCTATGGAACCTATGAACTAGATGCTGATCTGAATAATGGTATAGGGAAGAACTCTTACTTTTCGGTCTCCTGGCACAAGAATGTTAGCACAGGGAGTTGGATATTTTCAAATCGATTGACGACATCTTCTAAGTATCCTTGGCTTATGCTGTACCTTCGATCTGATGCAACAACGGGTTTCAATGGTGGATATCACTACGATGGTCGTGGCATTATGAGAAAGTTGCCCGAATCCCCAAATTTCAAAGTGAGATTAACACTCGACATTAAAAATGGAGGTGGAAAAAACAGCCAATTCTATCTCATTGACATAGGAAGCTGTTGGAAGAACAATGGAGATGCTTGCAACGGCAACACTACTACTGATGTAACTCGATACAGTGAAATGATTATCAACCCCGAAACTAGTAGCTGGTGTAGGCCGAACAATTTTGCGTCGTGTCCGCCTTATCATGTTAGTGTTTCAGGTGAGAAGATATACAGGAATGAGACATCAAGATTTCCATATTCAGCTTATCACCTGTACTGCAGTCCTGGAAATGCTATGCATTTGGAGAAACCATATGACATTTGTGATCCATATAGCAACCCTCAGTCTCAAGAGTTGCTACAAATTCTTCCACATCCTGAATGGGCTGTACATGGCTATCCAGAGAAGCAAGGAGATGGATGGATTGGAGATCCTAGAACTTGGGAGCTTGACGTAGGATCTTTGTCAAACCGCTTATACTTCTACCAGGATCCGGGAACGAAGCCAGCAAGGCGGGTATGGACTTCGATCAACGTCGGTGTAGAAATATATATTAGTGAAGGGGCAACAGCAGAGTGGAGTGTGAGTGATTTTGATGTCATTGTTCCACCAGATGCTAGGGATGCTAATTGCTGCTCTTATTAACTCTCTGCTCTTAACTTATTATGTAATATATCAATTAGCATCATCATGTCAATTTTTCTCTTCATCTTCCCCTTTGGCATCCTTTAAAAATACTTGCCACTTTATTGTTTCAATAACTAGAGGCTCCTTAGGAAGTTCTTCCTTCCTCTCACACAAGCCATTTTACTATAAAATTATGTGTTGTTGATTTAAGGGACTCAATCTAGTCAAGTGTTTATGGCCACAAATATTAAATAAAATAGTAAAGTTTCTATACT ATGAAATTCCACAGCTCCACGTTCTCGATTCACATTTTTCCATCATTTTGCGAAATGGGTTCTCTGTTTTCACCTTCATTCTTCTTCTTCTTCCTCCTCCTTCTTCTTCTATCCCAACAATTTTTCCTAAATTTGACCCATTGTTCGCCTCATGAATCGTTGGAGTATATATCCGCCATTGGAGACCCTGGAATGAAGAGCCCAAATGTTAGAGTTGCATTTGAGGCATGGAATTTTTGTAATGAAGTTGGAGCTGAAGCTCCTCGTATGGGCAGCCCCAGATTGGCTGATTGTGCTGATTTGCGAACCCCATTTGCTTCTGATCAACAAGATTGTTCTGGTCTTGAAAGTGATAGCAACTGTATGGTACTCCAGAAAGTAAATGAATCGGATAATAAACTTGGGGCTGGCGAAAAGTTCCCATCAGAGCGTTTTAAGTCATACCTGGATCCAGATTTGTATGTTGTGGAGAAGGAGCGCTATCTTGGTTCACTATGTGAGGTTCATGATTCTTCGAATCCATGGAGTTTTTGGATGATTATGCTAAAAAATGGGAATTTTGACAAGAACTCTACTCTCTGCCCTGAAAATGGCAAGAAGATTACTAAACTTATAACTGACAGAAAGTTCCCGTGTTTTGGCAAAGGTTGTATGAACCAGCCTCTTGTTTACCATAACTATTCGAGATTGGTGTCTTTCGGCAAACGAATGGTATCTTTAACTGGTGGTTTCTATGGAACCTATGAACTAGATGCTGATCTGAATAATGGTATAGGGAAGAACTCTTACTTTTCGGTCTCCTGGCACAAGAATGTTAGCACAGGGAGTTGGATATTTTCAAATCGATTGACGACATCTTCTAAGTATCCTTGGCTTATGCTGTACCTTCGATCTGATGCAACAACGGGTTTCAATGGTGGATATCACTACGATGGTCGTGGCATTATGAGAAAGTTGCCCGAATCCCCAAATTTCAAAGTGAGATTAACACTCGACATTAAAAATGGAGGTGGAAAAAACAGCCAATTCTATCTCATTGACATAGGAAGCTGTTGGAAGAACAATGGAGATGCTTGCAACGGCAACACTACTACTGATGTAACTCGATACAGTGAAATGATTATCAACCCCGAAACTAGTAGCTGGTGTAGGCCGAACAATTTTGCGTCGTGTCCGCCTTATCATGTTAGTGTTTCAGGTGAGAAGATATACAGGAATGAGACATCAAGATTTCCATATTCAGCTTATCACCTGTACTGCAGTCCTGGAAATGCTATGCATTTGGAGAAACCATATGACATTTGTGATCCATATAGCAACCCTCAGTCTCAAGAGTTGCTACAAATTCTTCCACATCCTGAATGGGCTGTACATGGCTATCCAGAGAAGCAAGGAGATGGATGGATTGGAGATCCTAGAACTTGGGAGCTTGACGTAGGATCTTTGTCAAACCGCTTATACTTCTACCAGGATCCGGGAACGAAGCCAGCAAGGCGGGTATGGACTTCGATCAACGTCGGTGTAGAAATATATATTAGTGAAGGGGCAACAGCAGAGTGGAGTGTGAGTGATTTTGATGTCATTGTTCCACCAGATGCTAGGGATGCTAATTGCTGCTCTTATTAA MKFHSSTFSIHIFPSFCEMGSLFSPSFFFFFLLLLLLSQQFFLNLTHCSPHESLEYISAIGDPGMKSPNVRVAFEAWNFCNEVGAEAPRMGSPRLADCADLRTPFASDQQDCSGLESDSNCMVLQKVNESDNKLGAGEKFPSERFKSYLDPDLYVVEKERYLGSLCEVHDSSNPWSFWMIMLKNGNFDKNSTLCPENGKKITKLITDRKFPCFGKGCMNQPLVYHNYSRLVSFGKRMVSLTGGFYGTYELDADLNNGIGKNSYFSVSWHKNVSTGSWIFSNRLTTSSKYPWLMLYLRSDATTGFNGGYHYDGRGIMRKLPESPNFKVRLTLDIKNGGGKNSQFYLIDIGSCWKNNGDACNGNTTTDVTRYSEMIINPETSSWCRPNNFASCPPYHVSVSGEKIYRNETSRFPYSAYHLYCSPGNAMHLEKPYDICDPYSNPQSQELLQILPHPEWAVHGYPEKQGDGWIGDPRTWELDVGSLSNRLYFYQDPGTKPARRVWTSINVGVEIYISEGATAEWSVSDFDVIVPPDARDANCCSY
BLAST of Lsi08G000360 vs. TrEMBL
Match: A0A0A0KSW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G650622 PE=4 SV=1) HSP 1 Score: 867.1 bits (2239), Expect = 1.1e-248 Identity = 410/524 (78.24%), Postives = 451/524 (86.07%), Query Frame = 1
BLAST of Lsi08G000360 vs. TrEMBL
Match: B9SLD3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0685200 PE=4 SV=1) HSP 1 Score: 839.7 bits (2168), Expect = 2.0e-240 Identity = 393/525 (74.86%), Postives = 439/525 (83.62%), Query Frame = 1
BLAST of Lsi08G000360 vs. TrEMBL
Match: M5XD77_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004293mg PE=4 SV=1) HSP 1 Score: 830.5 bits (2144), Expect = 1.2e-237 Identity = 383/520 (73.65%), Postives = 436/520 (83.85%), Query Frame = 1
BLAST of Lsi08G000360 vs. TrEMBL
Match: A0A067JK85_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26607 PE=4 SV=1) HSP 1 Score: 825.1 bits (2130), Expect = 5.0e-236 Identity = 379/514 (73.74%), Postives = 429/514 (83.46%), Query Frame = 1
BLAST of Lsi08G000360 vs. TrEMBL
Match: A9PF28_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 818.5 bits (2113), Expect = 4.7e-234 Identity = 379/534 (70.97%), Postives = 438/534 (82.02%), Query Frame = 1
BLAST of Lsi08G000360 vs. TAIR10
Match: AT2G47010.1 (AT2G47010.1 unknown protein) HSP 1 Score: 638.6 bits (1646), Expect = 3.4e-183 Identity = 287/473 (60.68%), Postives = 349/473 (73.78%), Query Frame = 1
BLAST of Lsi08G000360 vs. TAIR10
Match: AT1G17030.1 (AT1G17030.1 unknown protein) HSP 1 Score: 577.8 bits (1488), Expect = 7.0e-165 Identity = 263/500 (52.60%), Postives = 342/500 (68.40%), Query Frame = 1
BLAST of Lsi08G000360 vs. TAIR10
Match: AT4G09965.1 (AT4G09965.1 unknown protein) HSP 1 Score: 101.7 bits (252), Expect = 1.5e-21 Identity = 48/69 (69.57%), Postives = 60/69 (86.96%), Query Frame = 1
BLAST of Lsi08G000360 vs. NCBI nr
Match: gi|659119432|ref|XP_008459653.1| (PREDICTED: uncharacterized protein LOC103498709 [Cucumis melo]) HSP 1 Score: 871.7 bits (2251), Expect = 6.7e-250 Identity = 418/531 (78.72%), Postives = 456/531 (85.88%), Query Frame = 1
BLAST of Lsi08G000360 vs. NCBI nr
Match: gi|778708040|ref|XP_004141557.2| (PREDICTED: uncharacterized protein LOC101207585 [Cucumis sativus]) HSP 1 Score: 867.1 bits (2239), Expect = 1.6e-248 Identity = 410/524 (78.24%), Postives = 451/524 (86.07%), Query Frame = 1
BLAST of Lsi08G000360 vs. NCBI nr
Match: gi|1009137730|ref|XP_015886214.1| (PREDICTED: uncharacterized protein LOC107421478 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 842.4 bits (2175), Expect = 4.3e-241 Identity = 389/519 (74.95%), Postives = 440/519 (84.78%), Query Frame = 1
BLAST of Lsi08G000360 vs. NCBI nr
Match: gi|255571718|ref|XP_002526802.1| (PREDICTED: uncharacterized protein LOC8262698 [Ricinus communis]) HSP 1 Score: 839.7 bits (2168), Expect = 2.8e-240 Identity = 393/525 (74.86%), Postives = 439/525 (83.62%), Query Frame = 1
BLAST of Lsi08G000360 vs. NCBI nr
Match: gi|694368221|ref|XP_009362370.1| (PREDICTED: uncharacterized protein LOC103952509 [Pyrus x bretschneideri]) HSP 1 Score: 835.9 bits (2158), Expect = 4.1e-239 Identity = 381/505 (75.45%), Postives = 436/505 (86.34%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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