Lsi07G014880 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAATTTGTTTGAAAAAAGATATATATGCATATCTATTCTCTCTTTTTAAGTATGTCTATGGAGAAAAACTACACATTCAATTCAATAGTGTATCTGTGCAACCTAATCTAGGCACGTATGCAAATTCTTCACACTATAACCTTCAACTTGGACCTCTCCAACAACTCTCCTATTTGTCCACATGATTTGATGTTGAAAAGAATTGCCAACCAAAAGTTTTGTAACTTTCTATATGTTTTATTTCCTCACTTCTTTAAGATCAGTCTAGGAATCTACTGAATTCCAACTCATTAATCTGCATTTTTTACTTCCCTTCTGAGATATTTAATTGTTAAGTTATATTTTCTTCAAATATCTAAGCCTAACAAATGTCCTCTATTTATGCCTCCTATGACAAGCTAAACGACTGAGTATCAAGTCCTTGAAGAGAGCTCAAAAATGAAGGTAAGCAAAGAGTCCATACACTTGAAGATTTATACCCTTTATCATCCTATCCATTAATGTTGCCTTTCATTGCTGCAGTTATTAGGATGGATGCACAACAAATTTTGGCAAAGTGGAGTCGAGTCGGTCAAGGATTTCACAATTGGTATTTTAACAACCTCTTTTCCTCACACTTTTATTTATATTTATAGTACATATCTCAACAAGAAAAATGAGCAGATCATAGTACATCCAAGTTGATTAAGACGTACAATTCAAGTTTTGCTGTTGGGATTTATCCGGTTGGCTTAGTTTGATATCGTACACCAAGATTTGTTATATACCAGTTGAAAACTTGTTAAATTAGGGAACAATTGTTGGTACAAGAACAAAGTTAGAAATGTACAAGCTCTAAGGTCACCCTCACAGCTATAACATCTTGTAATTTCTCAACATTTCGTACTGTTGTAATCAGTCTAGCTGAAGCTTGAAGTCTGGCTGAACATGATGTTTCAAGGAAACATTACAGTTTCATTCTCTCTTCAGAAGTTGGGGCCACCTGGGGACCTGTAGGAACCTCTCATAACCTCTCATTCTCAAGCCTCTTTCTCTACCGTTGAAACTTCCGAGTAACATTACTATTAGATTGGTCCACTGTGTCTTGCCAGAAGTAGAACAGAAATAAGAAAAGGACATTCAAGTTGCAGTGTCTCACTAATTAACAAAAGGGGAATTTGTTACTATTTTGTTTAGAGAAATCATGGTGGACTCCAGAAATGATGAACTATTTTTTCTTTGGTTTCAGCGAACCCATGCATGTGCCTGTCATTACAAACACCAGTTGATGATGAAGAGTTCTATTTGAAGCCAGGTTTGGGTTGCAGAACCGTGCAGCCACATAGTCAGGATTATGAACAATCATCTTTTGGAGTTGAAGCCAACAATGTATTGGAAAAATGTGGGGACTTATCTAATTCATCTGATATCTTCCATGGGTTCCTCACTATTGGAACTCTGGGTTCTGAACCTGCAACACCAACATTCTCCTTGACTTTTGAAAACATGATTGAGTTGCCAGATGAGGTGACAGAGGATGACCTAAAACTGATAAATTATGAGTTAGAAAAGTTTCTTGAAGCTGAAACTAAGGAAGATTGTTGTGATCAATCACCTGGGAGGACAAGTCATGCTAGTATTATCACACTTGCATGCAAGCATACAGAAGTAACCGAAGATGAAAATGATGGGAAGACTCTAACATGTCCACTTCAGGGATATCTATTTGGATCTACAATTGAACTTCCAGACAAGATGATAGATATGAGGAAGGAAAAACCTTCATCTCCAGAGCTGTTCCAAGGGACTATAACAGCAAATCAGAGTTTCAAATTGAACATTGATAAAAAGGAGGTATTGGTCAAGCATTCAAATAAATCTGCACTAAGCTTTGTGAAGAAGATGCTTAAGAAACTTCGTACCTCTTCACATGGTTCTTGCACATATGACTCAGGTGATTCATATTCAACCAAGAAAAAACTCCAAAAGGTTAGTTTCCAATAGCTTTATTGTTATCATTTATTGAAATTAGTATTCTTGAGTGTCCACTGTGATTTCATTAGGCAAACACTGCTCATGTATATATAGTTCCATGACATAATGAAGAGAAAGATTCTGATACAGACACATATGTATGCATAACACTTGGTCGCAGGAGTACTTTTAAAAATAAGTGCTTTTAGCAAAAATAACTACGTTAGTTACAAGCACCTTAGTAAAAAGTGCATAGTAACAAAATCAATAACAATTCACTTTGACATTTGATTTAAACTCAAAAAAGTACTTTTGAAAAGTGTCTTCTGGTAAAGTCCTCAAGAAGGTTCTTCTCACAAAACACTGTAAGGTGCTTGCTTTTAACTTTTTCCAAAAGTATTTTGATGTAATCTCCAAACATAATAAGTCTGAGTGGGAAGTGGGTGGCACTTGAAGCAGCACTATAGAACTCATTCATAGCACTTGGTGCCTCTAGCACACACTAATTCAACTAAAAATCAGTTTCTTTGTCAAGCTTTTTGAGTGTATTATTTTGATATTCAGGTCCTACGTAGGTTCCATAGAAAAATACACCCTGAAACGTCTACTGCTACAGACGAATGTCAAAAGTCCCAAAAATACATCTTTGAGAATGCTTCTTTCGATAACTTCAATAATGGATGTGTGATGAACAGAGCAGAAGATCGAATAACTTATTGTCAGGAAATCATCTCAAAAGAGGAAATGTGTTATTGGAAAACCAACTTGGGCTTGCCCCTTTATGGGGTTGATACCAATGTTTCAAGTGCAAACAGAGGGCACTGGATCAAGACAGATGCAGAGTGTAAGCACCATCTTCAATGTTTAACTATTAACCTTAACCCTTTGATATATTTAATTATCAATTACTCAGATTAA AAATTTGTTTGAAAAAAGATATATATGCATATCTATTCTCTCTTTTTAAGTATGTCTATGGAGAAAAACTACACATTCAATTCAATAGTGTATCTGTGCAACCTAATCTAGGCACGTATGCAAATTCTTCACACTATAACCTTCAACTTGGACCTCTCCAACAACTCTCCTATTTGTCCACATGATTTGATGTTGAAAAGAATTGCCAACCAAAAGTTTTGTAACTTTCTATATGTTTTATTTCCTCACTTCTTTAAGATCAGTCTAGGAATCTACTGAATTCCAACTCATTAATCTGCATTTTTTACTTCCCTTCTGAGATATTTAATTGTTAAGTTATATTTTCTTCAAATATCTAAGCCTAACAAATGTCCTCTATTTATGCCTCCTATGACAAGCTAAACGACTGAGTATCAAGTCCTTGAAGAGAGCTCAAAAATGAAGTTATTAGGATGGATGCACAACAAATTTTGGCAAAGTGGAGTCGAGTCGGTCAAGGATTTCACAATTGCGAACCCATGCATGTGCCTGTCATTACAAACACCAGTTGATGATGAAGAGTTCTATTTGAAGCCAGGTTTGGGTTGCAGAACCGTGCAGCCACATAGTCAGGATTATGAACAATCATCTTTTGGAGTTGAAGCCAACAATGTATTGGAAAAATGTGGGGACTTATCTAATTCATCTGATATCTTCCATGGGTTCCTCACTATTGGAACTCTGGGTTCTGAACCTGCAACACCAACATTCTCCTTGACTTTTGAAAACATGATTGAGTTGCCAGATGAGGTGACAGAGGATGACCTAAAACTGATAAATTATGAGTTAGAAAAGTTTCTTGAAGCTGAAACTAAGGAAGATTGTTGTGATCAATCACCTGGGAGGACAAGTCATGCTAGTATTATCACACTTGCATGCAAGCATACAGAAGTAACCGAAGATGAAAATGATGGGAAGACTCTAACATGTCCACTTCAGGGATATCTATTTGGATCTACAATTGAACTTCCAGACAAGATGATAGATATGAGGAAGGAAAAACCTTCATCTCCAGAGCTGTTCCAAGGGACTATAACAGCAAATCAGAGTTTCAAATTGAACATTGATAAAAAGGAGGTATTGGTCAAGCATTCAAATAAATCTGCACTAAGCTTTGTGAAGAAGATGCTTAAGAAACTTCGTACCTCTTCACATGGTTCTTGCACATATGACTCAGGTGATTCATATTCAACCAAGAAAAAACTCCAAAAGGTCCTACGTAGGTTCCATAGAAAAATACACCCTGAAACGTCTACTGCTACAGACGAATGTCAAAAGTCCCAAAAATACATCTTTGAGAATGCTTCTTTCGATAACTTCAATAATGGATGTGTGATGAACAGAGCAGAAGATCGAATAACTTATTGTCAGGAAATCATCTCAAAAGAGGAAATGTGTTATTGGAAAACCAACTTGGGCTTGCCCCTTTATGGGGTTGATACCAATGTTTCAAGTGCAAACAGAGGGCACTGGATCAAGACAGATGCAGAGTGTAAGCACCATCTTCAATGTTTAACTATTAACCTTAACCCTTTGATATATTTAATTATCAATTACTCAGATTAA ATGAAGTTATTAGGATGGATGCACAACAAATTTTGGCAAAGTGGAGTCGAGTCGGTCAAGGATTTCACAATTGCGAACCCATGCATGTGCCTGTCATTACAAACACCAGTTGATGATGAAGAGTTCTATTTGAAGCCAGGTTTGGGTTGCAGAACCGTGCAGCCACATAGTCAGGATTATGAACAATCATCTTTTGGAGTTGAAGCCAACAATGTATTGGAAAAATGTGGGGACTTATCTAATTCATCTGATATCTTCCATGGGTTCCTCACTATTGGAACTCTGGGTTCTGAACCTGCAACACCAACATTCTCCTTGACTTTTGAAAACATGATTGAGTTGCCAGATGAGGTGACAGAGGATGACCTAAAACTGATAAATTATGAGTTAGAAAAGTTTCTTGAAGCTGAAACTAAGGAAGATTGTTGTGATCAATCACCTGGGAGGACAAGTCATGCTAGTATTATCACACTTGCATGCAAGCATACAGAAGTAACCGAAGATGAAAATGATGGGAAGACTCTAACATGTCCACTTCAGGGATATCTATTTGGATCTACAATTGAACTTCCAGACAAGATGATAGATATGAGGAAGGAAAAACCTTCATCTCCAGAGCTGTTCCAAGGGACTATAACAGCAAATCAGAGTTTCAAATTGAACATTGATAAAAAGGAGGTATTGGTCAAGCATTCAAATAAATCTGCACTAAGCTTTGTGAAGAAGATGCTTAAGAAACTTCGTACCTCTTCACATGGTTCTTGCACATATGACTCAGGTGATTCATATTCAACCAAGAAAAAACTCCAAAAGGTCCTACGTAGGTTCCATAGAAAAATACACCCTGAAACGTCTACTGCTACAGACGAATGTCAAAAGTCCCAAAAATACATCTTTGAGAATGCTTCTTTCGATAACTTCAATAATGGATGTGTGATGAACAGAGCAGAAGATCGAATAACTTATTGTCAGGAAATCATCTCAAAAGAGGAAATGTGTTATTGGAAAACCAACTTGGGCTTGCCCCTTTATGGGGTTGATACCAATGTTTCAAGTGCAAACAGAGGGCACTGGATCAAGACAGATGCAGAGTGTAAGCACCATCTTCAATGTTTAACTATTAACCTTAACCCTTTGATATATTTAATTATCAATTACTCAGATTAA MKLLGWMHNKFWQSGVESVKDFTIANPCMCLSLQTPVDDEEFYLKPGLGCRTVQPHSQDYEQSSFGVEANNVLEKCGDLSNSSDIFHGFLTIGTLGSEPATPTFSLTFENMIELPDEVTEDDLKLINYELEKFLEAETKEDCCDQSPGRTSHASIITLACKHTEVTEDENDGKTLTCPLQGYLFGSTIELPDKMIDMRKEKPSSPELFQGTITANQSFKLNIDKKEVLVKHSNKSALSFVKKMLKKLRTSSHGSCTYDSGDSYSTKKKLQKVLRRFHRKIHPETSTATDECQKSQKYIFENASFDNFNNGCVMNRAEDRITYCQEIISKEEMCYWKTNLGLPLYGVDTNVSSANRGHWIKTDAECKHHLQCLTINLNPLIYLIINYSD
BLAST of Lsi07G014880 vs. TrEMBL
Match: A0A0A0LBV3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G565330 PE=4 SV=1) HSP 1 Score: 656.0 bits (1691), Expect = 2.9e-185 Identity = 321/364 (88.19%), Postives = 335/364 (92.03%), Query Frame = 1
BLAST of Lsi07G014880 vs. TrEMBL
Match: A0A067FCL1_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g047473mg PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 6.9e-70 Identity = 162/376 (43.09%), Postives = 223/376 (59.31%), Query Frame = 1
BLAST of Lsi07G014880 vs. TrEMBL
Match: V4U838_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018081mg PE=4 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 1.5e-69 Identity = 161/375 (42.93%), Postives = 223/375 (59.47%), Query Frame = 1
BLAST of Lsi07G014880 vs. TrEMBL
Match: A0A061EEL3_THECC (Regulator of nonsense transcripts 3A, putative OS=Theobroma cacao GN=TCM_017254 PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 1.7e-68 Identity = 167/380 (43.95%), Postives = 222/380 (58.42%), Query Frame = 1
BLAST of Lsi07G014880 vs. TrEMBL
Match: A0A061E414_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_008615 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 4.9e-68 Identity = 173/391 (44.25%), Postives = 232/391 (59.34%), Query Frame = 1
BLAST of Lsi07G014880 vs. TAIR10
Match: AT5G14090.1 (AT5G14090.1 unknown protein) HSP 1 Score: 192.6 bits (488), Expect = 4.6e-49 Identity = 134/373 (35.92%), Postives = 192/373 (51.47%), Query Frame = 1
BLAST of Lsi07G014880 vs. TAIR10
Match: AT3G27025.1 (AT3G27025.1 unknown protein) HSP 1 Score: 66.6 bits (161), Expect = 3.8e-11 Identity = 88/296 (29.73%), Postives = 124/296 (41.89%), Query Frame = 1
BLAST of Lsi07G014880 vs. NCBI nr
Match: gi|659098403|ref|XP_008450122.1| (PREDICTED: uncharacterized protein LOC103491804 isoform X1 [Cucumis melo]) HSP 1 Score: 671.4 bits (1731), Expect = 9.5e-190 Identity = 327/364 (89.84%), Postives = 340/364 (93.41%), Query Frame = 1
BLAST of Lsi07G014880 vs. NCBI nr
Match: gi|659098417|ref|XP_008450129.1| (PREDICTED: uncharacterized protein LOC103491804 isoform X2 [Cucumis melo]) HSP 1 Score: 671.4 bits (1731), Expect = 9.5e-190 Identity = 327/364 (89.84%), Postives = 340/364 (93.41%), Query Frame = 1
BLAST of Lsi07G014880 vs. NCBI nr
Match: gi|778681618|ref|XP_004148010.2| (PREDICTED: uncharacterized protein LOC101218873 [Cucumis sativus]) HSP 1 Score: 656.0 bits (1691), Expect = 4.1e-185 Identity = 321/364 (88.19%), Postives = 335/364 (92.03%), Query Frame = 1
BLAST of Lsi07G014880 vs. NCBI nr
Match: gi|1009178274|ref|XP_015870437.1| (PREDICTED: uncharacterized protein LOC107407642 [Ziziphus jujuba]) HSP 1 Score: 283.5 bits (724), Expect = 5.6e-73 Identity = 171/394 (43.40%), Postives = 228/394 (57.87%), Query Frame = 1
BLAST of Lsi07G014880 vs. NCBI nr
Match: gi|985436498|ref|XP_015383120.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107175856, partial [Citrus sinensis]) HSP 1 Score: 277.7 bits (709), Expect = 3.1e-71 Identity = 163/378 (43.12%), Postives = 226/378 (59.79%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |