Lsi07G013780 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGTAATGAAAAAGAGAATCTCATGTTGGAAAAGGAAATAGTTGTCTACTATCTTTTACGATGATGACTAATACTTTTAAAACATATTCGAGTATTTCGATGCATATGGTTAAAGTTTGACATAAGATTATTCGATCTATACTTTAACTACTAATAAGGGAATAAGACTAACTAATTATATCCTTTTTCTAGCATATGTCTATATATATATATATATATATATATTAAAAGAGGCAATAAGAGAATTTTCACCTTCCTATTTTGCCCTTGATTTTTAAATATATTCTCATTATACGCACGGTTAGTTATAACATCTTTTCTTTTCAGAAATGATACATTTTCCTAAAAATACCTGTCTGCAAAGGATATGTCTTTTTCTTGAATTCCTTTTATTTTGGGTATATTCTTCTTTCTTTGAAATTTCTTTTATTTTAATTCATATTTGTTTGTGAACACTTTATTCCTCTTCTTCTTCTTTTTGTTTTGTTTTTTAGTTTGTATTTTTTTTTTGTATTATTATATGTGTTTTTTCAAGAGGGAGATTGTTGGGATTTGTGCCCTAAAGCCTTGTAATTTATTAGTTGATTAATTTAATTATTAATTATGCAATATTAATTTATCCATTAACCGTGAAAATCCAAGGTTATTATATGAAGTCTTGAACATGTAGGTAGTTGACATATGGGTAGATCATATTTAAGAAATAACCCAAAGGTCTATAGTATATGGATAATGTTGGGTGTCCTGGTAACACTATGGATACTGCCCACTTTGTAATAGTTACAAATGGTTTGATTCAAACCATTCATGTGGAGACATGTGAATGAGGTATTCTATACAAAGAGTGTGTATTAAGACCGGACCGCGAAATATTTAATCTCTCTTTGTAAATCCGTTAATTAAATGAGATTAATATTTCATAGGATGATCATGTGCGACTCGATCTCAATCCTGAGTGACTTACGAACTCCTGTCTGTGAGGTCAGTCTTTTGGTTTGCACGGGTGAGAGTGGCCCGAGTTGCCGACTCAATAAGCCTACCATTTTAGAACTTGACTAAATGGGGAGTTGAGAACATAAACTTCAGAAGATGGAATTCACTCCTTCCTGCATAGGGTAAGTAAATGAGTAGTTCTCTTAAGTGCTGATTTTGGGTCTTGAACAAGGGGCCACCATCTCACCGCCCGAGAGGGACTTAGTTTATGGTTGGACCATAAACAAATTGTTCATTAGAAGAATCAATGGTACTTAAGAAAAGATGTAATTACGAGAGTAAAACGGACATTTGACCCAGCTATAATTATGAACAACTCGTGAAGAATCAACTTGCTTATATTGATTATATCCATGGACACAACTTGTCCTACAGTGCATAAGAGTTTAACTATGGGTCTATAGTGGTTTGCCCTGTAGTTAATGAAGGAAGGTTAATTTAATTAAAGAGTTTAATTAATTAATCTTGAATCATTGGAACTTATAATCTGTATGTCCATGAGGTCCTCTGGCTAGCTCACAACGGACCAACAAGGATCAACTATGTTGAAAGAAAAAATTGAAATGTTCAAATTTATGAAAGAAAATATTAATTGTATTGGATACAATTAAATTACATGATTTATTATAAAGTTTATTTGAATGAGATTCAAATTATAACTTTATAATGTGGGAGAATTAATTTATTTAAATATGATTAAATAATTAATTATTTGGATGAGATCCATATAATAAAGTTATTTAATTTAAATAAGATTTGAATTAAATAATTGAGGGAGAATTAATTAATTTGAATTGGATTCAAATAATTAATTGTTTAATTTGGATGAGATTAAAATTAAAGATTTTACGGGAGATAAATATTTAAATATGATTTAAATATTTAAAACCATTTAATATGAGATATTATTTGGGTAGATATTTAATAATATTAGATATTATTAAATATTTAATTTAAGGTTATCCCAAGATAATTAAGAGTAACCTAGGGCCCTTAGGGGATCCCTGAAAAGTTCTAAGAAAATTCTTCTTCTCATTCCTCTATTCATTCAAGAAGCAGTTCCCACAAACCGGATCCTTGCTAGGTACGGTGCTTAACCTTTTTTTTTTTGTTTATTTGTATTTTTAATTGTTTCAAGAAATCAAAGAACGCGATCACAAACTTCTGCCGGGATTCAATTCCCTTCAGATCTTAAGCCAGCCAATATTCTTGCATTCTCCCAAAGTGACGAGAAGTTGAAATTGAAAATTGCCGACTTTGGACTTGCTCAAAGATGCCAGTATAGGGATGATGATCAAGACAGACAGTATTGGCAATGCGGTGCATTAAAGTTTAAAGGAACACCTAAATATATGTCACATGAATCCCTTGTTTTCAATAAGGTCAATAATGCACATGATATTTGGTCATTAGGTCGCATTTTGGTTAAAATAGTTCCTGAAAAGTATGTGTGGGATGATTTCAGAAGTGAACAATTGATGATAAGACTTTTGGATAATAAGAATATACCAACAATACCTATAGAATTATCCGAACAAGGCAAAGATTTTATGCACAACGTTGGACGGCTGAGATGTTACTCCAACACCCTTATCTCAATGAAGGAAATGAAGCTATGA ATGAAATATAGGGATGATGATCAAGACAGACAGTATTGGCAATGCGGTGCATTAAAGTTTAAAGGAACACCTAAATATATGTCACATGAATCCCTTGTTTTCAATAAGGTCAATAATGCACATGATATTTGGTCATTAGGTCGCATTTTGGTTAAAATAGTTCCTGAAAAGTATGTGTGGGATGATTTCAGAAGTGAACAATTGATGATAAGACTTTTGGATAATAAGAATATACCAACAATACCTATAGAATTATCCGAACAAGGCAAAGATTTTATGCACAACGTTGGACGGCTGAGATGTTACTCCAACACCCTTATCTCAATGAAGGAAATGAAGCTATGA ATGAAATATAGGGATGATGATCAAGACAGACAGTATTGGCAATGCGGTGCATTAAAGTTTAAAGGAACACCTAAATATATGTCACATGAATCCCTTGTTTTCAATAAGGTCAATAATGCACATGATATTTGGTCATTAGGTCGCATTTTGGTTAAAATAGTTCCTGAAAAGTATGTGTGGGATGATTTCAGAAGTGAACAATTGATGATAAGACTTTTGGATAATAAGAATATACCAACAATACCTATAGAATTATCCGAACAAGGCAAAGATTTTATGCACAACGTTGGACGGCTGAGATGTTACTCCAACACCCTTATCTCAATGAAGGAAATGAAGCTATGA MKYRDDDQDRQYWQCGALKFKGTPKYMSHESLVFNKVNNAHDIWSLGRILVKIVPEKYVWDDFRSEQLMIRLLDNKNIPTIPIELSEQGKDFMHNVGRLRCYSNTLISMKEMKL
BLAST of Lsi07G013780 vs. Swiss-Prot
Match: YODA_ARATH (Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 7.5e-10 Identity = 32/81 (39.51%), Postives = 48/81 (59.26%), Query Frame = 1
BLAST of Lsi07G013780 vs. Swiss-Prot
Match: M3K3_HUMAN (Mitogen-activated protein kinase kinase kinase 3 OS=Homo sapiens GN=MAP3K3 PE=1 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 7.8e-07 Identity = 23/81 (28.40%), Postives = 41/81 (50.62%), Query Frame = 1
BLAST of Lsi07G013780 vs. Swiss-Prot
Match: M3K3_MOUSE (Mitogen-activated protein kinase kinase kinase 3 OS=Mus musculus GN=Map3k3 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 7.8e-07 Identity = 23/81 (28.40%), Postives = 41/81 (50.62%), Query Frame = 1
BLAST of Lsi07G013780 vs. TrEMBL
Match: A0A0A0KAC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G378450 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 5.8e-25 Identity = 59/94 (62.77%), Postives = 77/94 (81.91%), Query Frame = 1
BLAST of Lsi07G013780 vs. TrEMBL
Match: A0A0A0K7G3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G065150 PE=4 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 4.3e-20 Identity = 48/92 (52.17%), Postives = 71/92 (77.17%), Query Frame = 1
BLAST of Lsi07G013780 vs. TrEMBL
Match: A0A0A0K835_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G407720 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 2.6e-17 Identity = 48/91 (52.75%), Postives = 68/91 (74.73%), Query Frame = 1
BLAST of Lsi07G013780 vs. TrEMBL
Match: B9HR94_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s13360g PE=4 SV=2) HSP 1 Score: 70.9 bits (172), Expect = 1.2e-09 Identity = 35/98 (35.71%), Postives = 58/98 (59.18%), Query Frame = 1
BLAST of Lsi07G013780 vs. TrEMBL
Match: A0A0B2PKP3_GLYSO (Mitogen-activated protein kinase kinase kinase 3 OS=Glycine soja GN=glysoja_044705 PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 5.8e-09 Identity = 37/89 (41.57%), Postives = 55/89 (61.80%), Query Frame = 1
BLAST of Lsi07G013780 vs. TAIR10
Match: AT1G63700.1 (AT1G63700.1 Protein kinase superfamily protein) HSP 1 Score: 64.7 bits (156), Expect = 4.2e-11 Identity = 32/81 (39.51%), Postives = 48/81 (59.26%), Query Frame = 1
BLAST of Lsi07G013780 vs. TAIR10
Match: AT5G67080.1 (AT5G67080.1 mitogen-activated protein kinase kinase kinase 19) HSP 1 Score: 60.5 bits (145), Expect = 8.0e-10 Identity = 28/79 (35.44%), Postives = 48/79 (60.76%), Query Frame = 1
BLAST of Lsi07G013780 vs. TAIR10
Match: AT4G36950.1 (AT4G36950.1 mitogen-activated protein kinase kinase kinase 21) HSP 1 Score: 58.9 bits (141), Expect = 2.3e-09 Identity = 29/81 (35.80%), Postives = 48/81 (59.26%), Query Frame = 1
BLAST of Lsi07G013780 vs. TAIR10
Match: AT3G50310.1 (AT3G50310.1 mitogen-activated protein kinase kinase kinase 20) HSP 1 Score: 57.0 bits (136), Expect = 8.8e-09 Identity = 28/80 (35.00%), Postives = 47/80 (58.75%), Query Frame = 1
BLAST of Lsi07G013780 vs. TAIR10
Match: AT2G30040.1 (AT2G30040.1 mitogen-activated protein kinase kinase kinase 14) HSP 1 Score: 48.9 bits (115), Expect = 2.4e-06 Identity = 23/73 (31.51%), Postives = 43/73 (58.90%), Query Frame = 1
BLAST of Lsi07G013780 vs. NCBI nr
Match: gi|659131276|ref|XP_008465601.1| (PREDICTED: mitogen-activated protein kinase kinase kinase ANP1-like, partial [Cucumis melo]) HSP 1 Score: 124.8 bits (312), Expect = 9.8e-26 Identity = 63/94 (67.02%), Postives = 76/94 (80.85%), Query Frame = 1
BLAST of Lsi07G013780 vs. NCBI nr
Match: gi|659111011|ref|XP_008455530.1| (PREDICTED: mitogen-activated protein kinase kinase kinase A-like [Cucumis melo]) HSP 1 Score: 124.4 bits (311), Expect = 1.3e-25 Identity = 63/93 (67.74%), Postives = 76/93 (81.72%), Query Frame = 1
BLAST of Lsi07G013780 vs. NCBI nr
Match: gi|778730382|ref|XP_011659771.1| (PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Cucumis sativus]) HSP 1 Score: 121.7 bits (304), Expect = 8.3e-25 Identity = 59/94 (62.77%), Postives = 77/94 (81.91%), Query Frame = 1
BLAST of Lsi07G013780 vs. NCBI nr
Match: gi|700189523|gb|KGN44756.1| (hypothetical protein Csa_7G378450 [Cucumis sativus]) HSP 1 Score: 121.7 bits (304), Expect = 8.3e-25 Identity = 59/94 (62.77%), Postives = 77/94 (81.91%), Query Frame = 1
BLAST of Lsi07G013780 vs. NCBI nr
Match: gi|449438574|ref|XP_004137063.1| (PREDICTED: mitogen-activated protein kinase kinase kinase ANP1-like [Cucumis sativus]) HSP 1 Score: 105.5 bits (262), Expect = 6.1e-20 Identity = 48/92 (52.17%), Postives = 71/92 (77.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |