Lsi07G013720 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G013720
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Cyclin F-box
Location	chr07 : 19935773 .. 19946480 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTGTTCGGAGTCTCGAGATTGGGCAACACTTGAATACGATGTCCTTGGTGTGATTCTCAACAAGATGGTGTCTCTCTATGATTATCTTCAATTTAGTAGGGTATGTAAGTCTTGGAATTTTATTGCATTACGCCACAAACACCAACGATCCCTAATTACTTCTAATGTTCCTCAACTTCCCATGCTCGTTGTTCCTTCAAAATATGATCGTGAGAAGGAACATTGTCTTTACAATCTCACAAACAATGAAATTCGCCCTGTAGACTTCATATTTTCCTTCAACAAAAGGTGTTGCGGTTCATCTTTTGGTTGGCTCATCATGCTTGAAGAGACATTTGATATTACTTTGTTTAACCCTTTTAATGGGAGTGTGATTCATCTTCCTCCCATTACTATAGATGATGAACCTGATTATTATCCTTGTTCCATACATAAAGCCATACTAACCAAAGATCCATCGCTATATCCACATGACTTCACTATTGTTGCCATCTATAGTTCATATCGTAGATTGTGTCTCATGAAAGCAAAGGATAAAACCTTAAGGTGGATCTATCACAACCTAAACACGAATAATGGTTTTGATGATGTTAATGTTTTCAATGACATTTTATATGTTTTGGACTGGCGGATGGGACTTTGGATTGTGGAAGTTGAGAATAGTTCAATTTATTTAAAGAAGGTCATATTTAGTGTAAGTTTAAATGATGGTCGTGAGGCTGATATAGTGTATCTTGTTGTGTCTTCCAAAAGTGAGCTTTTATTAGTTAGTAGGTTCAACTTACTCGAGTGGGAAGGAGAATTTCCAAATGAGATTCCAAAGTTTGCAAGGACTTTCAAATTTGTAGTCTATAAAGTTACTGATGAATGTGAAGATGGAATGGTGAGAGTTGTAGAGGTAGAGAGTTTAGATGGCGATGCTATGTTTATTGGTGACAACCAATCTATTTGTGTGTCAACTCAAGATTTTCCCAAATGTTTTCCTAATTGCATATACTATACAGATAATTGTCACTTGTATGATTTTCCTTGTTTATATGGACATCAAGATGCCGGAATATACAACCTAGAAAACAAGAGCTTTGATAAACACTATATAGTAGATTCTGCACATAGAAACTTGCCTCCACCCATATGGATCATTCCAACAATATGTTACAAAGATTTTGAGGATCCGTGGCCACATATTTTGAAAAGGAGTTTCTATTGGAATATAATTTTTATATTATGTTGGTGCGTATATATATGGTTACTACAATATGGGGGGTTCTAATTTTAATTTGAGATCACAATTTTATATTCTTGTAATATTATTGGATTAATGTTTACATCTTCTATATTTATTTTCTCTTCGATTTATGATTATATAATACTGCGGATAGGAGGATTAATTTCAATCTATATAGATCTCTTCAATTTTTTTTTTTTTTTTTTTTTTTNCAAAAAGGTGATTTAATTTAGAATTAGTGTTACATTTTTTTTTTAATTTCATCTTTGATTTTTTATAAATTTATTTTATTAATTGGAGTTGCCACATCTTTATCACTAAAACAATATTCGTACATGTACAGGGTTGCTCGAAGTTATCAATTGTACGTTGTCCTTCAAGATTTCCTGACTAAGTATTCTATTTTTTGATATCATCTTAAATCGCCAATTGACCTAAAAGTTTAAGTTGATAGGTGGAAGCAAATTTAATATAATATCTAACCGGGAGTTTAGAAAAGAAAAAAATAATATGCAAGAAATGTAAATTGCAAGAGAAAAGATTATTTTTAGATTTTATATTTGTGTGAGAGAAACAATTTTAAACAATTGGGAATAGGGACTAGTTTAATTCACTTTTATTATTGAATCAAAGAGACATTGATTAACTCAAGAATCCACAATCAAGTAGAAATTCAATCCAAATTGACTTAATTCATATATGGATTATTTAAAATAAACACGAATAGATATGGATTATTTGAAATAAATCCAAAATTGATGGATTAATTGAAATATCAAAGGACTATTTTTTTTGTTTTTGTTTTTTTTTTTCTTTCATTAAATAGGGAAAAATGAAAGAACTATCCTACTTATTGTATATATTTGGTCAAATTAATCACATCATATTAGGATACCAACTAAAAATATTATTTCTTTCTTCTTTGAATGAACCTGAAAATGACTGCACATACAATAATTTATTATATTCATGTATTAATGATATTCTCATACTATATTTTTTTCATCCCATTATTCTCCTCCACAGAGTAGAAGTGTTTGTAGGAAAATAAAAAATAATAGTAATATACTGTTATTGAAACAAAATGTGTGTTAAAATACTATAGAAATACAAACAAAATATGTGTTAAAACACTATAAATATACTGTTACCCAATTTTTCAAATATATATATAATTTATTTCTTTATTTTGGAATGGTAATGATAATGTTTTTAATTGAGATTAATATGGAGAATGGAAATGTTTTTATTTTGAAGTTTTTGAAAATTATTTGATGTTATGGAAAACGGAATAATGAATGGAATCGGATGATGACGATGGACGAAAGAAATTGTGTTTATTGGTTTAGGTGGGGTCCACAGTGAGGTGGTCCCTACCTCATTTTAGAGTGGGCCAAAAAATATATGCAGCTGAGGGGGAGGGGGAAAGGAAAGGAAAGGAATGAAACGCTGGTTTGGCACGTGCGAAGGAGGGGGAATTTGGGAGTGTGGGCGGACGCCGGAAATGAAGGATTCTTCGTTTTTTTATTAGTTATTTTTTCCAAATACAACTTTTTAAATTTAGTTTTTTTAATGTATATTACAATGAACCGTAATATTTTGTTACCAAATCATATATATTTCATATCAAATTCATTAATATTCCAAAATATCAACACATTTTTTTTTTTTTTTTTTATTTCGATTTTAAATTTGTTTCTAAAAGCCAACTACTCAATGAAAAAGAGGATTAAACTAATTAGATGATATATAATTCATTTTTTTCTTTTTTAAAAAAATATTTTGAGAATGTTTTTTCTTTTGATTTAATTTAGATTTGATTGTTGATTTATATATTCAAACGAAATATTAAGGAAAAATATATATTAATTATAACATTGTCTATAACACCATATAAATAGTTAGCAAAACCCAATAAATGGGTTGAATCTCTTAAATAATGAATGAAATATTACAACAAATATTTTATGATTGCAATTATTTTCCTTCCACGCCATACATTTTAAAGTTTGGTTATTTCTAAATCTATTTATTTTTAAAATCTAAATGTTTATAATTATGTATTTAAATTTATTCTTCTCCGGTTATTTTCCATATTTAAAGTTTAGATTTAAGGTATTTTTATTTCTCTTTCCATATTTAGAATTAGGACTTTGTTTCCATATCTTTTTTAAGAATAAATTGTATTAAATTGTATTGAATCTCTCACTTTATATTTAATTGTCTGATTTTGAAGATTAAAAGAGTGTATTTTGAACCGCGTTTCCTCCTCGACGGCCGGCATTCACCAACCAACCGACTTACAGTGAGCTTCTCTTCCTTTTCCTTCAATATATTTTGTCTTTTCTTTTTTTTTTTTAATTTATATATAATTATAATTATAATTATTTTGAGTAACTTTAATATTTTATTTGTTATATTGAAGAGGACAACATGGATTGTTCGGAGTCTCGAGATTGGGCAACACTTGAATACGATGTCCTTGGTGTGATTCTCAACAAGATGGTGTCTCTCTATGATTATCTTCAATTTAGTAGGGTATGTAAGTCTTGGAATTTTATTGCATTACGCCACAAACACCAACGATCCCTAATTACTTCTAATGTTCCTCAACTTCCCATGCTCGTTGTTCCTTCAAAATATGATCGTGAGAAGGAACATTGTCTTTACAATCTCACAAACAATGAAATTCGCCCTGTAGACTTCATATTTTCCTTCAACAAAAGGTGTTGCGGTTCATCTTTTGGTTGGCTCATCATGCTTGAAGAGACATTTGATATTACTTTGTTTAACCCTTTTAATGGGAGTGTGATTCATCTTCCTCCCATTACTATAGATGATGAACCTGATTATTATCCTTGTTCCATACATAAAGCCATACTAACCAAAGATCCATCGCTATATCCACATGACTTCACTATTGTTGCCATCTATAGTTCATATCGTAGATTGTGTCTCATGAAAGCAAAGGATAAAACCTTAAGGTGGATCTATCACAACCTAAACACGAATAATGGTTTTGATGATGTTAATGTTTTCAATGACATTTTATATGTTTTGGACTGGCGGATGGGACTTTGGATTGTGGAAGTTGAGAATAGTTCAATTTATTTAAAGAAGGTCATATTTAGTGTAAGTTTAAATGATGGTCGTGAGGCTGATATAGTGTATCTTGTTGTGTCTTCCAAAAGTGAGCTTTTATTAGTTAGTAGGTTCAACTTACTCGAGTGGGAAGGAGAATTTCCAAATGAGATTCCAAAGTTTGCAAGGACTTTCAAATTTGTAGTCTATAAAGTTACTGATGAATGTGAAGATGGAATGGTGAGAGTTGTAGAGGTAGAGAGTTTAGATGGCGATGCTATGTTTATTGGTGACAACCAATCTATTTGTGTGTCAACTCAAGATTTTCCCAAATGTTTTCCTAATTGCATATACTATACAGATAATTGTCACTTGTATGATTTTCCTTGTTTATATGGACATCAAGATGCCGGAATATACAACCTAGAAAACAAGAGCTTTGATAAACACTATATAGTAGATTCTGCACATAGAAACTTGCCTCCACCCATATGGATCATTCCAACAATATGTTACAAAGATTTTGAGGATCCGTGGCCACATATTTTGAAAAGGAGTTTCTATTGGAATATAATTTTTATATTATGTTGGTGCGTATATATATGGTTACTACAATATGGGGGGTTCTAATTTTAATTTGAGATCACAATTTTATATTCTTGTAATATTATTGGATTAATGTTTACATCTTCTATATTTATTTTCTCTTCGATTTATGATTATATAATACTGCGGATAGGAGGATTAATTTCAATCTATATAGATCTCTTCAATTTTTTTTTTTTTAGCAAATAAGTAGGATAATTCTTTTTTTTTTTTTTTCNACAAAAATTTGGATGATTAAAATTCATTAGGATCAAATTTGTTGATAAACTAAAATCTAAATCACTTTTAATAAAAACTGACAACTAATTAACTTTTGGTTTAGCACTTTCTGTATTTGTTTTAGTTTGTTTTTGATTTATTTGAGTTTGTGAGGTTTGTTTTTATCAATTAGGATAGTTTTAGTATTTGTTAATTAGTAATTTTTTAGTTAAAAAAAAATCATTTTTCTTATATTTATGATTTTGAAAACATTTTGCTATTTTTCGAAATGCAACTTTAAAATTTGTTATTTGCCTCACCCTATCTAAAATTCATATTTTATGTCAATTGTGCTGATGATAAATTAGAAATAAAATTTGAGAAACGAATATCTGACATTTTAGTCAAAATTTCATACTTTATGCCAATTGAGTTAGGTTAATTTTGAAATTAGAAGGTTAAATAATACTAAGCATATCTTTCCATTAGTATTAGACATAAAATTAAAAGTTTAAAATAGGGTTAGGTGAAAATTTATAATGGTAATGATAATGTTTTTAATTGAAATTAATTTGGATAATGGTAATGTTTTTATTTTGAAGTTTTTTAAAATTATTTTATTTTGTGAAGAACGCTTGCTTCTAATGAGATTCCCAACAAGAATCCTCACTGTTTCATTTTGTCTAAACTGTATTCAGATTGGTTTTTGTTCAAGATGGAGAACCCTTGCTTCAAATTTTAAATTCAATTTTCATATATTAAAATATGTTATAAATGATTAAAAGTATGTTTTAAAATGATTTTAATCATTTCAGATTCACTTTTAAACATGTCTTAAAATATATAATAGTGTTGTTTCGGAACTTAATTGCTATATTCTAAAAAATTGCCTTTCTTCCATATTTCGAAAACAAATTTGGAATTACTTTCTTAATTGTTATCATTGATATGCGTTTGATTTTGATATATTGTTTCCATATTTAAAACCATTTTCTGATAAAAATCTTTCATAATATTTTAGTTTTTTAAATATTAATTACCAGCCGTAGAGATGTGAAGTCCGTTTTTAAATATGAAATTTAAGCTCCAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTTGCTTCAACCAGATATTTCTTAAATTGTAGACTAAAGAGGCTTAAAACAAAACTTTGAATTCAAATTTCATATCAAATTCATTAATATTCCAAAATATAAACACATCTCTACGATAATATATGATTATTAGACTAAAGAGATTATTAGAGATAATCTATGATTTATTTAAAAAAATAACTCAGTGAATTAGAGATTAGAGTATAAAATGTAACTTTTTTTACTTTTTATATTTTTTCCCTTTATTTAACAATGAAGTAGAGATTATCAAATTTGATTTTTTTAAAGGAAAAAAATTCCCTTTTACGTGGAGTAGATATTATAAGAGAGAATAAAATGTGATCTTTTTTTAAAATAAAAATCGTAAATATTATTATAGATAAAATGTGATTTTTTAAAAAAAAAATATTTGAATTATATATTAAAGAATAAAAGTTTTTTTTTATATATTTTTTTTCTTTTATTTAACATCAAGTAGATATAATTAGAGATAAAATGTGATATTTTGTTTTTTAAATTTTTTTCGTGAATTAGAGATTTGAGGAGATGTTTTAAAAATAATTTAAGAGTGTTTTTTCTCTTGATTTAATTTAGATTTGATTGTTGATTTATATATTCAAACGAAATATTCAGTAAAAATATATATTAATTATAACATTGTCTATAAGATCATATAAATAGTTGGCAAAACTCAATAAATGGGCTCAGTCTCTTAAATAATGAATGAAATATTACAACAAATATTTTATCATTGCAATTATTTTCCTTCCACCATACATTTTAAAGTTTGATTGTTTTCATAGTAGCGATTTAAATTAATTGATTTTTTTAAAAAAGAAACTAATGGAGAAATTTTTTTCTTATAGAGAACTTGATCATCGCAAACATCTCTAATTCCCACCTTGTACTAAAATAAATTCTAAAATGTGTAAAATTGCATTAATTTCCTATTCTAAATTTCCAATTTCATAAAATGAGATTTCTTTTTATAAATACATAGGTTTTATTATTATTATTATTATTTTTTAGAACTATATACTACATAAAATGTTAATGCTTGGTGTGATTCTCAACAAAATAGTATCTATCTATTATCTTCAATTTAGCAAGGTATGTAAATCTTGGAATTTTAATGGCCACAAACACCAACGATCTCTAGTTACTTCTAAGGTTCTTCAACTTCCTATGCTCATTGTTCCCTCAGAATATGTTAGTTGAGAAGGTACATTGTCTTTACAATCTCACGAACAATGAAATTCGTCCTGTAGACTTCATATTTTCCTTCAACAAAAGCTGTTGTGGTTCATCTTTTGGTTGGTTGATCATGCTTGAAGAGACATTCGATATTACTTTGTCTAACCCTTTTAATGGGAGTGTGGTTCCTCTTCCTCTCATTACTAACCTGATTATTATCCTTGTTCCCTACATAAAGTCATACTAACCAAAGATCCATCGTTATATCCACACGACTTCACTATTGTTGTCATCTATATAGTTCATTTCGTAGATTGTGTCTCATGAAAGCAAAGGATAAAAGGTGGATCTATCATAACCTAAACAGGAAAAATGGTTTTGACAATGTTAATGTTCTCAATGACATTTTATATGTTTTGGATTGGCGGATGAGACTTTGGATTGTGAAAGTTGAGAATAGTTCAATTTATTTAAAGGTCATATTTAGTGTAAATTTAAATGATGGTCATCAAGCTAATATAGCGTATCTTGTTGTGTCCTCCAAAAGTGAGCTTTTATTAGTTAATAGGTTCACCTTACTTGAGTGGAAATGACAATTTCCAAATGAAATTTCAAAGTTTATGAGGNTCACATCATATTAGGATACCAACTAAAAATATTATTTCTTTCTTCTTTGAATGAACCTGAAAATGACTGCACATACAATAATTTATTATATTCATGTATTAATGATATTCTCATACTATATTTTTTTCATCCCATTATTCTCCTCCACAGAGTAGAAGTGTTTGTAGGAAAATAAAAAATAATAGTAATATACTGTTATTGAAACAAAATGTGTGTTAAAATACTATAGAAATACAAACAAAATATGTGTTAAAACACTATAAATATACTGTTACCCAATTTTTCAAATATATATATAATTTATTTCTTTATTTTGGAATGGTAATGATAATGTTTTTAATTGAGATTAATATGGAGAATGGAAATGTTTTTATTTTGAAGTTTTTGAAAATTATTTGATGTTATGGAAAACGGAATAATGAATGGAATCGGATGATGACGATGGACGAAAGAAATTGTGTTTATTGGTTTAGGTGGGGTCCACAGTGAGGTGGTCCCTACCTCATTTTAGAGTGGGCCAAAAAATATATGCAGCTGAGGGGGAGGGGGAAAGGAAAGGAAAGGAATGAAACGCTGGTTTGGCACGTGCGAAGGAGGGGGAATTTGGGAGTGTGGGCGGACGCCGGAAATGAAGGATTCTTCGTTTTTTTATTAGTTATTTTTTCCAAATACAACTTTTTAAATTTAGTTTTTTTAATGTATATTACAATGAACCGTAATATTTTGTTACCAAATCATATATATTTCATATCAAATTCATTAATATTCCAAAATATCAACACATTTTTTTTTTTTTTTTTTATTTCGATTTTAAATTTGTTTCTAAAAGCCAACTACTCAATGAAAAAGAGGATTAAACTAATTAGATGATATATAATTCATTTTTTTCTTTTTTAAAAAAATATTTTGAGAATGTTTTTTCTTTTGATTTAATTTAGATTTGATTGTTGATTTATATATTCAAACGAAATATTAAGGAAAAATATATATTAATTATAACATTGTCTATAACACCATATAAATAGTTAGCAAAACCCAATAAATGGGTTGAATCTCTTAAATAATGAATGAAATATTACAACAAATATTTTATGATTGCAATTATTTTCCTTCCACGCCATACATTTTAAAGTTTGGTTATTTCTAAATCTATTTATTTTTAAAATCTAAATGTTTATAATTATGTATTTAAATTTATTCTTCTCCGGTTATTTTCCATATTTAAAGTTTAGATTTAAGGTATTTTTATTTCTCTTTCCATATTTAGAATTAGGACTTTGTTTCCATATCTTTTTTAAGAATAAATTGTATTAAATTGTATTGAATCTCTCACTTTATATTTAATTGTCTGATTTTGAAGATTAAAAGAGTGTATTTTGAACCGCGTTTCCTCCTCGACGGCCGGCATTCACCAACCAACCGACTTACAGTGAGCTTCTCTTCCTTTTCCTTCAATATATTTTGTCTTTTCTTTTTTTTTTTTAATTTATATATAATTATAATTATAATTATTTTGAGTAACTTTAATATTTTATTTGTTATATTGAAGAGGACAACATGGATTGTTCGGAGTCTCGAGATTGGGCAACACTTGAATACGATGTCCTTGGTGTGATTCTCAACAAGATGGTGTCTCTCTATGATTATCTTCAATTTAGTAGGGTATGTAAGTCTTGGAATTTTATTGCATTACGCCACAAACACCAACGATCCCTAATTACTTCTAATGTTCCTCAACTTCCCATGCTCGTTGTTCCTTCAAAATATGATCGTGAGAAGGAACATTGTCTTTACAATCTCACAAACAATGAAATTCGCCCTGTAGACTTCATATTTTCCTTCAACAAAAGGTGTTGCGGTTCATCTTTTGGTTGGCTCATCATGCTTGAAGAGACATTTGATATTACTTTGTTTAACCCTTTTAATGGGAGTGTGATTCATCTTCCTCCCATTACTATAGATGATGAACCTGATTATTATCCTTGTTCCATACATAAAGCCATACTAACCAAAGATCCATCGCTATATCCACATGACTTCACTATTGTTGCCATCTATAGTTCATATCGTAGATTGTGTCTCATGAAAGCAAAGGATAAAACCTTAAGGTGGATCTATCACAACCTAAACACGAATAATGGTTTTGATGATGTTAATGTTTTCAATGACATTTTATATGTTTTGGACTGGCGGATGGGACTTTGGATTGTGGAAGTTGAGAATAGTTCAATTTATTTAAAGAAGGTCATATTTAGTGTAAGTTTAAATGATGGTCGTGAGGCTGATATAGTGTATCTTGTTGTGTCTTCCAAAAGTGAGCTTTTATTAGTTAGTAGGTTCAACTTACTCGAGTGGGAAGGAGAATTTCCAAATGAGATTCCAAAGTTTGCAAGGACTTTCAAATTTGTAGTCTATAAAGTTACTGATGAATGTGAAGATGGAATGGTGAGAGTTGTAGAGGTAGAGAGTTTAGATGGCGATGCTATGTTTATTGGTGACAACCAATCTATTTGTGTGTCAACTCAAGATTTTCCCAAATGTTTTCCTAATTGCATATACTATACAGATAATTGTCACTTGTATGATTTTCCTTGTTTATATGGACATCAAGATGCCGGAATATACAACCTAG

mRNA sequence

ATGGATTGTTCGGAGTCTCGAGATTGGGCAACACTTGAATACGATGTCCTTGGTGTGATTCTCAACAAGATGGTGTCTCTCTATGATTATCTTCAATTTAGTAGGGTATGTAAGTCTTGGAATTTTATTGCATTACGCCACAAACACCAACGATCCCTAATTACTTCTAATGTTCCTCAACTTCCCATGCTCGTTGTTCCTTCAAAATATGATCGTGAGAAGGAACATTGTCTTTACAATCTCACAAACAATGAAATTCGCCCTGTAGACTTCATATTTTCCTTCAACAAAAGGTGTTGCGGTTCATCTTTTGGTTGGCTCATCATGCTTGAAGAGACATTTGATATTACTTTGTTTAACCCTTTTAATGGGAGTGTGATTCATCTTCCTCCCATTACTATAGATGATGAACCTGATTATTATCCTTGTTCCATACATAAAGCCATACTAACCAAAGATCCATCGCTATATCCACATGACTTCACTATTGTTGCCATCTATAGTTCATATCGTAGATTGTGTCTCATGAAAGCAAAGGATAAAACCTTAAGGTGGATCTATCACAACCTAAACACGAATAATGGTTTTGATGATGTTAATGTTTTCAATGACATTTTATATGTTTTGGACTGGCGGATGGGACTTTGGATTGTGGAAGTTGAGAATAGTTCAATTTATTTAAAGAAGGTCATATTTAGTGTAAGTTTAAATGATGGTCGTGAGGCTGATATAGTGTATCTTGTTGTGTCTTCCAAAAGTGAGCTTTTATTAGTTAGTAGGTTCAACTTACTCGAGTGGGAAGGAGAATTTCCAAATGAGATTCCAAAGTTTGCAAGGACTTTCAAATTTGTAGTCTATAAAGTTACTGATGAATGTGAAGATGGAATGGTGAGAGTTGTAGAGGTAGAGAGTTTAGATGGCGATGCTATGTTTATTGAGGACAACATGGATTGTTCGGAGTCTCGAGATTGGGCAACACTTGAATACGATGTCCTTGGTGTGATTCTCAACAAGATGGTGTCTCTCTATGATTATCTTCAATTTAGTAGGGTATGTAAGTCTTGGAATTTTATTGCATTACGCCACAAACACCAACGATCCCTAATTACTTCTAATGTTCCTCAACTTCCCATGCTCGTTGTTCCTTCAAAATATGATCGTGAGAAGGAACATTGTCTTTACAATCTCACAAACAATGAAATTCGCCCTGTAGACTTCATATTTTCCTTCAACAAAAGGTGTTGCGGTTCATCTTTTGGTTGGCTCATCATGCTTGAAGAGACATTTGATATTACTTTGTTTAACCCTTTTAATGGGAGTGTGATTCATCTTCCTCCCATTACTATAGATGATGAACCTGATTATTATCCTTGTTCCATACATAAAGCCATACTAACCAAAGATCCATCGCTATATCCACATGACTTCACTATTGTTGCCATCTATAGTTCATATCGTAGATTGTGTCTCATGAAAGCAAAGGATAAAACCTTAAGGTGGATCTATCACAACCTAAACACGAATAATGGTTTTGATGATGTTAATGTTTTCAATGACATTTTATATGTTTTGGACTGGCGGATGGGACTTTGGATTGTGGAAGTTGAGAATAGTTCAATTTATTTAAAGAAGGTCATATTTAGTGTAAGTTTAAATGATGGTCGTGAGGCTGATATAGTGTATCTTGTTGTGTCTTCCAAAAGTGAGCTTTTATTAGTTAGTAGGTTCAACTTACTCGAGTGGGAAGGAGAATTTCCAAATGAGATTCCAAAGTTTGCAAGGACTTTCAAATTTGTAGTCTATAAAGTTACTGATGAATGTGAAGATGGAATGGTGAGAGTTGTAGAGGTAGAGAGTTTAGATGGCGATGCTATGTTTATTGAGGACAACATGGATTGTTCGGAGTCTCGAGATTGGGCAACACTTGAATACGATGTCCTTGGTGTGATTCTCAACAAGATGGTGTCTCTCTATGATTATCTTCAATTTAGTAGGGTATGTAAGTCTTGGAATTTTATTGCATTACGCCACAAACACCAACGATCCCTAATTACTTCTAATGTTCCTCAACTTCCCATGCTCGTTGTTCCTTCAAAATATGATCGTGAGAAGGAACATTGTCTTTACAATCTCACAAACAATGAAATTCGCCCTGTAGACTTCATATTTTCCTTCAACAAAAGGTGTTGCGGTTCATCTTTTGGTTGGCTCATCATGCTTGAAGAGACATTTGATATTACTTTGTTTAACCCTTTTAATGGGAGTGTGATTCATCTTCCTCCCATTACTATAGATGATGAACCTGATTATTATCCTTGTTCCATACATAAAGCCATACTAACCAAAGATCCATCGCTATATCCACATGACTTCACTATTGTTGCCATCTATAGTTCATATCGTAGATTGTGTCTCATGAAAGCAAAGGATAAAACCTTAAGGTGGATCTATCACAACCTAAACACGAATAATGGTTTTGATGATGTTAATGTTTTCAATGACATTTTATATGTTTTGGACTGGCGGATGGGACTTTGGATTGTGGAAGTTGAGAATAGTTCAATTTATTTAAAGAAGGTCATATTTAGTGTAAGTTTAAATGATGGTCGTGAGGCTGATATAGTGTATCTTGTTGTGTCTTCCAAAAGTGAGCTTTTATTAGTTAGTAGGTTCAACTTACTCGAGTGGGAAGGAGAATTTCCAAATGAGATTCCAAAGTTTGCAAGGACTTTCAAATTTGTAGTCTATAAAGTTACTGATGAATGTGAAGATGGAATGGTGAGAGTTGTAGAGATAATTGTCACTTGTATGATTTTCCTTGTTTATATGGACATCAAGATGCCGGAATATACAACCTAG

Coding sequence (CDS)

ATGGATTGTTCGGAGTCTCGAGATTGGGCAACACTTGAATACGATGTCCTTGGTGTGATTCTCAACAAGATGGTGTCTCTCTATGATTATCTTCAATTTAGTAGGGTATGTAAGTCTTGGAATTTTATTGCATTACGCCACAAACACCAACGATCCCTAATTACTTCTAATGTTCCTCAACTTCCCATGCTCGTTGTTCCTTCAAAATATGATCGTGAGAAGGAACATTGTCTTTACAATCTCACAAACAATGAAATTCGCCCTGTAGACTTCATATTTTCCTTCAACAAAAGGTGTTGCGGTTCATCTTTTGGTTGGCTCATCATGCTTGAAGAGACATTTGATATTACTTTGTTTAACCCTTTTAATGGGAGTGTGATTCATCTTCCTCCCATTACTATAGATGATGAACCTGATTATTATCCTTGTTCCATACATAAAGCCATACTAACCAAAGATCCATCGCTATATCCACATGACTTCACTATTGTTGCCATCTATAGTTCATATCGTAGATTGTGTCTCATGAAAGCAAAGGATAAAACCTTAAGGTGGATCTATCACAACCTAAACACGAATAATGGTTTTGATGATGTTAATGTTTTCAATGACATTTTATATGTTTTGGACTGGCGGATGGGACTTTGGATTGTGGAAGTTGAGAATAGTTCAATTTATTTAAAGAAGGTCATATTTAGTGTAAGTTTAAATGATGGTCGTGAGGCTGATATAGTGTATCTTGTTGTGTCTTCCAAAAGTGAGCTTTTATTAGTTAGTAGGTTCAACTTACTCGAGTGGGAAGGAGAATTTCCAAATGAGATTCCAAAGTTTGCAAGGACTTTCAAATTTGTAGTCTATAAAGTTACTGATGAATGTGAAGATGGAATGGTGAGAGTTGTAGAGGTAGAGAGTTTAGATGGCGATGCTATGTTTATTGAGGACAACATGGATTGTTCGGAGTCTCGAGATTGGGCAACACTTGAATACGATGTCCTTGGTGTGATTCTCAACAAGATGGTGTCTCTCTATGATTATCTTCAATTTAGTAGGGTATGTAAGTCTTGGAATTTTATTGCATTACGCCACAAACACCAACGATCCCTAATTACTTCTAATGTTCCTCAACTTCCCATGCTCGTTGTTCCTTCAAAATATGATCGTGAGAAGGAACATTGTCTTTACAATCTCACAAACAATGAAATTCGCCCTGTAGACTTCATATTTTCCTTCAACAAAAGGTGTTGCGGTTCATCTTTTGGTTGGCTCATCATGCTTGAAGAGACATTTGATATTACTTTGTTTAACCCTTTTAATGGGAGTGTGATTCATCTTCCTCCCATTACTATAGATGATGAACCTGATTATTATCCTTGTTCCATACATAAAGCCATACTAACCAAAGATCCATCGCTATATCCACATGACTTCACTATTGTTGCCATCTATAGTTCATATCGTAGATTGTGTCTCATGAAAGCAAAGGATAAAACCTTAAGGTGGATCTATCACAACCTAAACACGAATAATGGTTTTGATGATGTTAATGTTTTCAATGACATTTTATATGTTTTGGACTGGCGGATGGGACTTTGGATTGTGGAAGTTGAGAATAGTTCAATTTATTTAAAGAAGGTCATATTTAGTGTAAGTTTAAATGATGGTCGTGAGGCTGATATAGTGTATCTTGTTGTGTCTTCCAAAAGTGAGCTTTTATTAGTTAGTAGGTTCAACTTACTCGAGTGGGAAGGAGAATTTCCAAATGAGATTCCAAAGTTTGCAAGGACTTTCAAATTTGTAGTCTATAAAGTTACTGATGAATGTGAAGATGGAATGGTGAGAGTTGTAGAGGTAGAGAGTTTAGATGGCGATGCTATGTTTATTGAGGACAACATGGATTGTTCGGAGTCTCGAGATTGGGCAACACTTGAATACGATGTCCTTGGTGTGATTCTCAACAAGATGGTGTCTCTCTATGATTATCTTCAATTTAGTAGGGTATGTAAGTCTTGGAATTTTATTGCATTACGCCACAAACACCAACGATCCCTAATTACTTCTAATGTTCCTCAACTTCCCATGCTCGTTGTTCCTTCAAAATATGATCGTGAGAAGGAACATTGTCTTTACAATCTCACAAACAATGAAATTCGCCCTGTAGACTTCATATTTTCCTTCAACAAAAGGTGTTGCGGTTCATCTTTTGGTTGGCTCATCATGCTTGAAGAGACATTTGATATTACTTTGTTTAACCCTTTTAATGGGAGTGTGATTCATCTTCCTCCCATTACTATAGATGATGAACCTGATTATTATCCTTGTTCCATACATAAAGCCATACTAACCAAAGATCCATCGCTATATCCACATGACTTCACTATTGTTGCCATCTATAGTTCATATCGTAGATTGTGTCTCATGAAAGCAAAGGATAAAACCTTAAGGTGGATCTATCACAACCTAAACACGAATAATGGTTTTGATGATGTTAATGTTTTCAATGACATTTTATATGTTTTGGACTGGCGGATGGGACTTTGGATTGTGGAAGTTGAGAATAGTTCAATTTATTTAAAGAAGGTCATATTTAGTGTAAGTTTAAATGATGGTCGTGAGGCTGATATAGTGTATCTTGTTGTGTCTTCCAAAAGTGAGCTTTTATTAGTTAGTAGGTTCAACTTACTCGAGTGGGAAGGAGAATTTCCAAATGAGATTCCAAAGTTTGCAAGGACTTTCAAATTTGTAGTCTATAAAGTTACTGATGAATGTGAAGATGGAATGGTGAGAGTTGTAGAGATAATTGTCACTTGTATGATTTTCCTTGTTTATATGGACATCAAGATGCCGGAATATACAACCTAG

Protein sequence

MDCSESRDWATLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNVPQLPMLVVPSKYDREKEHCLYNLTNNEIRPVDFIFSFNKRCCGSSFGWLIMLEETFDITLFNPFNGSVIHLPPITIDDEPDYYPCSIHKAILTKDPSLYPHDFTIVAIYSSYRRLCLMKAKDKTLRWIYHNLNTNNGFDDVNVFNDILYVLDWRMGLWIVEVENSSIYLKKVIFSVSLNDGREADIVYLVVSSKSELLLVSRFNLLEWEGEFPNEIPKFARTFKFVVYKVTDECEDGMVRVVEVESLDGDAMFIEDNMDCSESRDWATLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNVPQLPMLVVPSKYDREKEHCLYNLTNNEIRPVDFIFSFNKRCCGSSFGWLIMLEETFDITLFNPFNGSVIHLPPITIDDEPDYYPCSIHKAILTKDPSLYPHDFTIVAIYSSYRRLCLMKAKDKTLRWIYHNLNTNNGFDDVNVFNDILYVLDWRMGLWIVEVENSSIYLKKVIFSVSLNDGREADIVYLVVSSKSELLLVSRFNLLEWEGEFPNEIPKFARTFKFVVYKVTDECEDGMVRVVEVESLDGDAMFIEDNMDCSESRDWATLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNVPQLPMLVVPSKYDREKEHCLYNLTNNEIRPVDFIFSFNKRCCGSSFGWLIMLEETFDITLFNPFNGSVIHLPPITIDDEPDYYPCSIHKAILTKDPSLYPHDFTIVAIYSSYRRLCLMKAKDKTLRWIYHNLNTNNGFDDVNVFNDILYVLDWRMGLWIVEVENSSIYLKKVIFSVSLNDGREADIVYLVVSSKSELLLVSRFNLLEWEGEFPNEIPKFARTFKFVVYKVTDECEDGMVRVVEIIVTCMIFLVYMDIKMPEYTT

Homology

[Close]

BLAST of Lsi07G013720 vs. TrEMBL
Match: A0A0A0L2J8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099610 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 2.9e-146
Identity = 254/325 (78.15%), Postives = 286/325 (88.00%), Query Frame = 1


Query: 1   MDCSESRDWATLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNVPQ 60
           MDC ESRDW+TLEYDVLG+ILNKMVSLYDYLQFS VCKSWNFIALR+KH RSLITSN+PQ
Sbjct: 1   MDCLESRDWSTLEYDVLGMILNKMVSLYDYLQFSSVCKSWNFIALRYKHHRSLITSNLPQ 60

Query: 61  LPMLVVPSKYDREKEHCLYNLTNNEIRPVDFIFSFNKRCCGSSFGWLIMLEETFDITLFN 120
           LPML+VPS+YD  K+HCLY+L NNEIRPVDF+ SFNKRCCGSSFGWLIMLE+T DITLFN
Sbjct: 61  LPMLIVPSEYDSGKQHCLYDLINNEIRPVDFVCSFNKRCCGSSFGWLIMLEDTLDITLFN 120

Query: 121 PFNGSVIHLPPITIDDEPDYYPCSIHKAILTKDPSLYPHDFTIVAIYSSYRRLCLMKAKD 180
           PFNG+VIH+PPITI DEP Y P +IHKAILTKDPS+YP  FTIVAIYSS+RRLCLM+AKD
Sbjct: 121 PFNGNVIHIPPITIHDEPGYSPIAIHKAILTKDPSIYPQGFTIVAIYSSFRRLCLMEAKD 180

Query: 181 KTLRWIYHNLNTNNGFDDVNVFNDILYVLDWRMGLWIVEVENSSIYLKKVIFSVSLNDGR 240
           K  RWIYHNLN NNGFDDVNV +DILYVLDWR+GLWIV+VE+SSIYLKKVIFS + N   
Sbjct: 181 K--RWIYHNLNRNNGFDDVNVVDDILYVLDWRIGLWIVKVEDSSIYLKKVIFSFNFN--- 240

Query: 241 EADIVYLVVSSKSELLLVSRFNLLEWEGEFPNEIPKFARTFKFVVYKVTDECEDGMVRVV 300
           EADI YL+VSSK ELLLVSRF + +WEG+ PNEI KF RT KF+V+KVT ECEDG++RVV
Sbjct: 241 EADIAYLIVSSKRELLLVSRFVVTQWEGQVPNEILKFTRTSKFIVHKVTHECEDGIMRVV 300

Query: 301 EVESLDGDAMFIEDNMD-CSESRDW 325
           EVESLDGD MFI DN   C  ++D+
Sbjct: 301 EVESLDGDVMFIGDNQSICVSTKDF 320

[Close]

BLAST of Lsi07G013720 vs. TrEMBL
Match: M5W2I9_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025068mg PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.5e-41
Identity = 112/325 (34.46%), Postives = 170/325 (52.31%), Query Frame = 1


Query: 9   WATLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNVPQLPMLVVPS 68
           WA L  D+L +I+ K++ + D ++   VCK+W  +A   KHQR  + S   QLPML+VPS
Sbjct: 13  WAWLPSDLLYLIVEKLIPITDCIRLGAVCKNWQSVARHQKHQR--LKSCHKQLPMLMVPS 72

Query: 69  KYDREKEHCLYNLTNNEIRPVDFIFSFNKRCCGSSFGWLIMLEETFDITLFNPFNGSVIH 128
           K++R +   LY++   E    +    +NKR CGSS GWL  ++E  ++TL NPF    +H
Sbjct: 73  KHNRHERRGLYSVAKGETCSFELHVPYNKRLCGSSHGWLACVDENLEVTLLNPFTKRTVH 132

Query: 129 LPPITIDDEP--------DYYPCSIHKAILTKDPSLYPHDFTIVAIY-SSYRRLCLMKAK 188
           LPP T   +P        D+Y   I K +L+ DPSL+P+D+  VA++ S+  R+  +K+ 
Sbjct: 133 LPPFTQVPQPIHKQAYRSDHY---IKKVVLSADPSLFPNDYEAVALFDSNGTRVAHIKSG 192

Query: 189 -------DKTLRWIYHNLNTNNGFDDVNVFNDILYVLDWRMGLWIVEVENSSIYLKKVIF 248
                  D+T+R+ Y  LN   GFDDV  +           G++ + V     Y   V  
Sbjct: 193 DHGWTHIDQTIRFFY-GLNQVIGFDDVIYYRGQFLAASREGGVFAINVSKDPTYKPHVSL 252

Query: 249 SVSLNDGREADIVYLVVSSKSELLLVSRFNLLEWEGEFPNEIPKFARTFKFVVYKVTDEC 308
            V +  G + D  YLV SS  +LLLV +F  +       N +  F     F V+K+  +C
Sbjct: 253 VVPIVQGID-DQAYLVESSSGDLLLVRKFQSM-------NYVECFTEILSFKVFKLFSDC 312

Query: 309 ED--GMVRVVEVESLDGDAMFIEDN 316
            D  G  R+ E++S+  DA F+  N
Sbjct: 313 GDKIGSERIEEIDSIGNDAFFLGGN 323

[Close]

BLAST of Lsi07G013720 vs. TrEMBL
Match: A0A068TW97_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032507001 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 3.2e-36
Identity = 113/338 (33.43%), Postives = 178/338 (52.66%), Query Frame = 1


Query: 5   ESRDWATLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNVPQLPML 64
           E + WA L+ DVLGVILNK++ L D+++FS VCKSW  +AL HKH+R + T N  Q+PML
Sbjct: 30  EGKSWAELQRDVLGVILNKLI-LPDFIRFSVVCKSWLSVALDHKHKR-METIN-QQVPML 89

Query: 65  VVPSKYDREKEHC-LYNLTNNEIRPVDFIFSFNKRCCGSSFGWLIMLEETFDITLFNPFN 124
           ++P   +  KEH  LY+L  N++    F+     RCCGSS+GW  M E+   + L NPF+
Sbjct: 90  MIPQ--EGRKEHWNLYSLCENKVYGYQFLVPHRVRCCGSSYGWWAMAEKDLSVKLVNPFS 149

Query: 125 GSVIHLPPITI-----DDEPDYYPCSIHKAILTKDPSLYPHDFTIVAIYSSYRRLCLMKA 184
           G +IHLPPI +        P+YY   IH+ IL+ DP LYP+ + + A Y++   +  +K+
Sbjct: 150 GEIIHLPPIMVAIPGFHTVPEYY---IHRVILSCDPCLYPNSYVVAATYNAAPVVAFIKS 209

Query: 185 KDKTLRWIYHNLNTNNGFDDVNVFNDILYVLDWRMGLWIVEVENSSI------------- 244
            +++  ++Y+     N   ++    + LY ++ R  + +++ E +               
Sbjct: 210 GEQSWTYVYNKFRPVN---NILFHKEQLYAVNSRNQVLVIDYEGNDSSDDSEDEDEDEDD 269

Query: 245 ----YLKKVIFSVSLNDGRE-ADIVYLVVSSKSELLLVSRFNLLEWEGEFPNEIPKFART 304
               Y +       ++   E + + YLV S    LLLV R  L     E  ++I  +  T
Sbjct: 270 DEVEYYEGPRVEYLISQPTEYSHVSYLVESFDGGLLLVRRRYL-----EIIDDI-DYKVT 329

Query: 305 FKFVVYKVT---DECEDGMVRVVEVESLDGDAMFIEDN 316
             F VY++T      E+     VE +SL   A+F+ DN
Sbjct: 330 VGFKVYRMTRKHSSDEEEEPEWVETKSLPNIALFVGDN 350

[Close]

BLAST of Lsi07G013720 vs. TrEMBL
Match: A0A0A0L1U5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G038180 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.5e-33
Identity = 99/231 (42.86%), Postives = 140/231 (60.61%), Query Frame = 1


Query: 106 WLIMLEETFDITLFNPFNGSVIHLPPITIDDEPD-YYPCSIHKAILTKDPSLYPHDFTIV 165
           WL+  +  FD TL NPF+GSVI LPP+  + E D Y+P  + KAILTKDPSLYP+D+ +V
Sbjct: 35  WLV--DHAFDFTLLNPFSGSVIRLPPLPKEHEDDVYHPWYMLKAILTKDPSLYPNDYMVV 94

Query: 166 AIYSSYRRLCLMKAKDKTLRWIYHNLNTN---NGFDDVNVFNDILYVL---DWRMGLWIV 225
           AIY    +LCL++AK K   W  +++      N F+DV V N+ LY     D ++ LW V
Sbjct: 95  AIYGISTKLCLIEAKSKI--WKKYDIPPGQDYNPFEDVYVCNNNLYASHLDDVQLNLWKV 154

Query: 226 EV-ENSSIYLKKV--IFSVSLNDGREADIVYLVVSSKSELLLVSRFNLLEWEGEFPNEIP 285
           EV ENS I L++V  I   SL+   +   +++V SSK E+LL+ R   +E   +  + I 
Sbjct: 155 EVDENSPISLQRVAVILQPSLST-HDFGPMFIVESSKKEVLLIRRVLSVEDHEQPDSGIT 214

Query: 286 KFARTFKFVVYKVTDECEDGMVRVVEVESLDGDAMFIEDNMDCSESRDWAT 327
              +T KFV YK T  C+DG  R  EV+SLD DA+FI +   C  ++++ T
Sbjct: 215 TLVKTIKFVAYKHTRTCKDGTQRFEEVKSLDDDAVFIGEQSICISTKNFPT 260

[Close]

BLAST of Lsi07G013720 vs. TrEMBL
Match: M5W7N4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026022mg PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.3e-33
Identity = 104/344 (30.23%), Postives = 172/344 (50.00%), Query Frame = 1


Query: 9   WATLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNVPQLPMLVVPS 68
           WA L  ++L +IL K++ + DY++FS VCK W  +AL  K QR  I S   Q+PML++P+
Sbjct: 5   WAWLPSNILDLILEKLIPISDYIRFSAVCKHWQSVALHRKKQR--IKSCHKQIPMLIIPT 64

Query: 69  KYDREKEHCLYNLTNNEIRPVDFIFSFNKRCCGSSFGWLIMLEETFDITLFNPFNGSVIH 128
                +   LY++T  +    +    ++KR CGSS GWL  ++E   +TL NPF G  I 
Sbjct: 65  IDGSSERRGLYSVTQGKTCSFELNVYYSKRFCGSSHGWLACVDENLVVTLLNPFTGRTIS 124

Query: 129 LPPI-------TIDDEPDYYPCSIHKAILTKDPSLYPHDFTIVAIYSSY-RRLCLMKAKD 188
           LPP+       T+    DYY   I+K +L+ DPS  P+D+ ++ IY  Y +++   K+ D
Sbjct: 125 LPPVPKSTWRSTVAYRCDYY---INKVVLSADPSFLPNDYEVLVIYDGYGKQIAHFKSGD 184

Query: 189 KTLRWIYHNLNTNNGFDDVNVFNDILYVLDWRMGLWIVEVENSSIYLKKVIFSVSLNDGR 248
                 + +++   GFDDV  +      +     ++ + V        +V   V ++ G 
Sbjct: 185 DA----WTSIDQVIGFDDVIYYKGQFLGVSLGGSVFSMNVSRDQTIKPRVSLLVPMDPGT 244

Query: 249 EADIVYLVVSSKSELLLVSR---------------FNLLEWEG---EFPNEIPKFARTFK 308
           + +  YLV SS+ +L+LV +               F + ++E    E  N   +F  T  
Sbjct: 245 D-NKTYLVQSSQGDLMLVRKFKRVNHCKRFMKSLNFKIFKFERLKFERVNGYDRFTETLS 304

Query: 309 FVVYKVTDECEDG-MVRVVEVESLDGDAMFIEDNMD-CSESRDW 325
           F V+K+   C  G   + VE+ES+  +A+F+  N   C  + D+
Sbjct: 305 FKVFKLF--CAHGERPQWVEIESIGNEALFLGTNQSMCVSALDF 336

[Close]

BLAST of Lsi07G013720 vs. NCBI nr
Match: gi|700201067|gb|KGN56200.1| (hypothetical protein Csa_3G099610 [Cucumis sativus])

HSP 1 Score: 527.7 bits (1358), Expect = 4.2e-146
Identity = 254/325 (78.15%), Postives = 286/325 (88.00%), Query Frame = 1


Query: 1   MDCSESRDWATLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNVPQ 60
           MDC ESRDW+TLEYDVLG+ILNKMVSLYDYLQFS VCKSWNFIALR+KH RSLITSN+PQ
Sbjct: 1   MDCLESRDWSTLEYDVLGMILNKMVSLYDYLQFSSVCKSWNFIALRYKHHRSLITSNLPQ 60

Query: 61  LPMLVVPSKYDREKEHCLYNLTNNEIRPVDFIFSFNKRCCGSSFGWLIMLEETFDITLFN 120
           LPML+VPS+YD  K+HCLY+L NNEIRPVDF+ SFNKRCCGSSFGWLIMLE+T DITLFN
Sbjct: 61  LPMLIVPSEYDSGKQHCLYDLINNEIRPVDFVCSFNKRCCGSSFGWLIMLEDTLDITLFN 120

Query: 121 PFNGSVIHLPPITIDDEPDYYPCSIHKAILTKDPSLYPHDFTIVAIYSSYRRLCLMKAKD 180
           PFNG+VIH+PPITI DEP Y P +IHKAILTKDPS+YP  FTIVAIYSS+RRLCLM+AKD
Sbjct: 121 PFNGNVIHIPPITIHDEPGYSPIAIHKAILTKDPSIYPQGFTIVAIYSSFRRLCLMEAKD 180

Query: 181 KTLRWIYHNLNTNNGFDDVNVFNDILYVLDWRMGLWIVEVENSSIYLKKVIFSVSLNDGR 240
           K  RWIYHNLN NNGFDDVNV +DILYVLDWR+GLWIV+VE+SSIYLKKVIFS + N   
Sbjct: 181 K--RWIYHNLNRNNGFDDVNVVDDILYVLDWRIGLWIVKVEDSSIYLKKVIFSFNFN--- 240

Query: 241 EADIVYLVVSSKSELLLVSRFNLLEWEGEFPNEIPKFARTFKFVVYKVTDECEDGMVRVV 300
           EADI YL+VSSK ELLLVSRF + +WEG+ PNEI KF RT KF+V+KVT ECEDG++RVV
Sbjct: 241 EADIAYLIVSSKRELLLVSRFVVTQWEGQVPNEILKFTRTSKFIVHKVTHECEDGIMRVV 300

Query: 301 EVESLDGDAMFIEDNMD-CSESRDW 325
           EVESLDGD MFI DN   C  ++D+
Sbjct: 301 EVESLDGDVMFIGDNQSICVSTKDF 320

[Close]

BLAST of Lsi07G013720 vs. NCBI nr
Match: gi|449463176|ref|XP_004149310.1| (PREDICTED: uncharacterized protein LOC101210708 [Cucumis sativus])

HSP 1 Score: 524.2 bits (1349), Expect = 4.6e-145
Identity = 255/328 (77.74%), Postives = 287/328 (87.50%), Query Frame = 1


Query: 631 MDCSESRDWATLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNVPQ 690
           MDC ESRDW+TLEYDVLG+ILNKMVSLYDYLQFS VCKSWNFIALR+KH RSLITSN+PQ
Sbjct: 1   MDCLESRDWSTLEYDVLGMILNKMVSLYDYLQFSSVCKSWNFIALRYKHHRSLITSNLPQ 60

Query: 691 LPMLVVPSKYDREKEHCLYNLTNNEIRPVDFIFSFNKRCCGSSFGWLIMLEETFDITLFN 750
           LPML+VPS+YD  K+HCLY+L NNEIRPVDF+ SFNKRCCGSSFGWLIMLE+T DITLFN
Sbjct: 61  LPMLIVPSEYDSGKQHCLYDLINNEIRPVDFVCSFNKRCCGSSFGWLIMLEDTLDITLFN 120

Query: 751 PFNGSVIHLPPITIDDEPDYYPCSIHKAILTKDPSLYPHDFTIVAIYSSYRRLCLMKAKD 810
           PFNG+VIH+PPITI DEP Y P +IHKAILTKDPS+YP  FTIVAIYSS+RRLCLM+AKD
Sbjct: 121 PFNGNVIHIPPITIHDEPGYSPIAIHKAILTKDPSIYPQGFTIVAIYSSFRRLCLMEAKD 180

Query: 811 KTLRWIYHNLNTNNGFDDVNVFNDILYVLDWRMGLWIVEVENSSIYLKKVIFSVSLNDGR 870
           K  RWIYHNLN NNGFDDVNV +DILYVLDWR+GLWIV+VE+SSIYLKKVIFS + N   
Sbjct: 181 K--RWIYHNLNRNNGFDDVNVVDDILYVLDWRIGLWIVKVEDSSIYLKKVIFSFNFN--- 240

Query: 871 EADIVYLVVSSKSELLLVSRFNLLEWEGEFPNEIPKFARTFKFVVYKVTDECEDGMVRVV 930
           EADI YL+VSSK ELLLVSRF + +WEG+ PNEI KF RT KF+V+KVT ECEDG++RVV
Sbjct: 241 EADIAYLIVSSKRELLLVSRFVVTQWEGQVPNEILKFTRTSKFIVHKVTHECEDGIMRVV 300

Query: 931 E-------IIVTCMIFLVYMDIKMPEYT 952
           E       IIVT ++FL+YMDIKM EYT
Sbjct: 301 EVESLDGDIIVTILLFLIYMDIKMQEYT 323

[Close]

BLAST of Lsi07G013720 vs. NCBI nr
Match: gi|659096592|ref|XP_008449178.1| (PREDICTED: uncharacterized protein LOC103491129 [Cucumis melo])

HSP 1 Score: 350.9 bits (899), Expect = 7.0e-93
Identity = 191/336 (56.85%), Postives = 239/336 (71.13%), Query Frame = 1


Query: 1   MDCSESRDWATLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNVPQ 60
           MDCSESRDW TLEYD+LGVILNKM+SLYDYLQFS VCKSWNF+ALRHKHQRS+ITS  PQ
Sbjct: 1   MDCSESRDWTTLEYDILGVILNKMMSLYDYLQFSLVCKSWNFVALRHKHQRSVITSEFPQ 60

Query: 61  LPMLVVPSKYDR-EKEHCLYNLTNNEIRPVDFIFSFNKRCCGSSFGWLIMLEETFDITLF 120
           LPML+VPS  D  EK+HCLY++TNN+IR  DF F FNKRCCGSSFGWLIM EETFD+TLF
Sbjct: 61  LPMLIVPSIKDGIEKQHCLYDVTNNKIRTADFKFCFNKRCCGSSFGWLIMHEETFDVTLF 120

Query: 121 NPFNGSVIHLPPITID-DEPDYYPCSIHKAILTKDPSLYPHDFTIVAIYSSYRRLCLMKA 180
           NPF+G+VI LPP+  + ++ DYYP  I KAILTKDPSLYP+D+ +VAIY    +LCL++A
Sbjct: 121 NPFSGTVIRLPPLPKEHEDDDYYPWYILKAILTKDPSLYPNDYMVVAIYGISTKLCLIEA 180

Query: 181 KDKTLRWIYHNL---NTNNGFDDVNVFNDILYVL---DWRMGLWIVEV-ENSSIYLKKV- 240
           K K   W  +++      N F+DV V ND LY     D ++ LW VEV ENS I L++V 
Sbjct: 181 KSKI--WKKYDIPPGQDYNPFEDVYVCNDTLYASHLDDVQLNLWKVEVDENSPISLQRVA 240

Query: 241 -IFSVSLNDGREADIVYLVVSSKSELLLVSRFNLLEWEGEFPNEI-PKFARTFKFVVYKV 300
            I   SL+   +   +++V SSK ELLL+ R   +E   +  ++I     +T KFV YK 
Sbjct: 241 IILQPSLST-HDFGPMFIVESSKKELLLIRRILSVEDHEQPDSDITTTLVKTIKFVAYKH 300

Query: 301 TDECEDGMVRVVEVESLDGDAMFIEDNMDCSESRDW 325
           T  C DG  R  EV+SLD DA+FI +   C  ++++
Sbjct: 301 THTCNDGTQRFEEVKSLDDDAVFIGEQSICISTKNF 333

[Close]

BLAST of Lsi07G013720 vs. NCBI nr
Match: gi|659134098|ref|XP_008467027.1| (PREDICTED: uncharacterized protein LOC103504452, partial [Cucumis melo])

HSP 1 Score: 319.3 bits (817), Expect = 2.3e-83
Identity = 146/167 (87.43%), Postives = 157/167 (94.01%), Query Frame = 1


Query: 1   MDCSESRDWATLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNVPQ 60
           MDC ESRDW+TLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSN  Q
Sbjct: 1   MDCLESRDWSTLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNHSQ 60

Query: 61  LPMLVVPSKYDREKEHCLYNLTNNEIRPVDFIFSFNKRCCGSSFGWLIMLEETFDITLFN 120
           LP+L+VPS+YD EK+HCLY+LTNNEIRPVDF+ SFNKRCCGSSFGWLI+LEET DITLFN
Sbjct: 61  LPVLIVPSEYDSEKQHCLYDLTNNEIRPVDFVCSFNKRCCGSSFGWLILLEETLDITLFN 120

Query: 121 PFNGSVIHLPPITIDDEPDYYPCSIHKAILTKDPSLYPHDFTIVAIY 168
           PFNG+ IH+PPITIDDEPDY P +IHKAILTKDPSLYPH FTIVAIY
Sbjct: 121 PFNGNKIHIPPITIDDEPDYCPLAIHKAILTKDPSLYPHGFTIVAIY 167

[Close]

BLAST of Lsi07G013720 vs. NCBI nr
Match: gi|595833845|ref|XP_007206745.1| (hypothetical protein PRUPE_ppa025068mg, partial [Prunus persica])

HSP 1 Score: 179.9 bits (455), Expect = 2.1e-41
Identity = 112/325 (34.46%), Postives = 170/325 (52.31%), Query Frame = 1


Query: 9   WATLEYDVLGVILNKMVSLYDYLQFSRVCKSWNFIALRHKHQRSLITSNVPQLPMLVVPS 68
           WA L  D+L +I+ K++ + D ++   VCK+W  +A   KHQR  + S   QLPML+VPS
Sbjct: 13  WAWLPSDLLYLIVEKLIPITDCIRLGAVCKNWQSVARHQKHQR--LKSCHKQLPMLMVPS 72

Query: 69  KYDREKEHCLYNLTNNEIRPVDFIFSFNKRCCGSSFGWLIMLEETFDITLFNPFNGSVIH 128
           K++R +   LY++   E    +    +NKR CGSS GWL  ++E  ++TL NPF    +H
Sbjct: 73  KHNRHERRGLYSVAKGETCSFELHVPYNKRLCGSSHGWLACVDENLEVTLLNPFTKRTVH 132

Query: 129 LPPITIDDEP--------DYYPCSIHKAILTKDPSLYPHDFTIVAIY-SSYRRLCLMKAK 188
           LPP T   +P        D+Y   I K +L+ DPSL+P+D+  VA++ S+  R+  +K+ 
Sbjct: 133 LPPFTQVPQPIHKQAYRSDHY---IKKVVLSADPSLFPNDYEAVALFDSNGTRVAHIKSG 192

Query: 189 -------DKTLRWIYHNLNTNNGFDDVNVFNDILYVLDWRMGLWIVEVENSSIYLKKVIF 248
                  D+T+R+ Y  LN   GFDDV  +           G++ + V     Y   V  
Sbjct: 193 DHGWTHIDQTIRFFY-GLNQVIGFDDVIYYRGQFLAASREGGVFAINVSKDPTYKPHVSL 252

Query: 249 SVSLNDGREADIVYLVVSSKSELLLVSRFNLLEWEGEFPNEIPKFARTFKFVVYKVTDEC 308
            V +  G + D  YLV SS  +LLLV +F  +       N +  F     F V+K+  +C
Sbjct: 253 VVPIVQGID-DQAYLVESSSGDLLLVRKFQSM-------NYVECFTEILSFKVFKLFSDC 312

Query: 309 ED--GMVRVVEVESLDGDAMFIEDN 316
            D  G  R+ E++S+  DA F+  N
Sbjct: 313 GDKIGSERIEEIDSIGNDAFFLGGN 323

The following BLAST results are available for this feature:

BLAST of Lsi07G013720 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi07G013720 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2J8_CUCSA	2.9e-146	78.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099610 PE=4 SV=1	[more]
M5W2I9_PRUPE	1.5e-41	34.46	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa025068mg PE=4 S...	[more]
A0A068TW97_COFCA	3.2e-36	33.43	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00032507001 PE=4 SV=1	[more]
A0A0A0L1U5_CUCSA	1.5e-33	42.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G038180 PE=4 SV=1	[more]
M5W7N4_PRUPE	3.3e-33	30.23	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026022mg PE=4 SV=1	[more]

BLAST of Lsi07G013720 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi07G013720 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700201067\|gb\|KGN56200.1\|	4.2e-146	78.15	hypothetical protein Csa_3G099610 [Cucumis sativus]	[more]
gi\|449463176\|ref\|XP_004149310.1\|	4.6e-145	77.74	PREDICTED: uncharacterized protein LOC101210708 [Cucumis sativus]	[more]
gi\|659096592\|ref\|XP_008449178.1\|	7.0e-93	56.85	PREDICTED: uncharacterized protein LOC103491129 [Cucumis melo]	[more]
gi\|659134098\|ref\|XP_008467027.1\|	2.3e-83	87.43	PREDICTED: uncharacterized protein LOC103504452, partial [Cucumis melo]	[more]
gi\|595833845\|ref\|XP_007206745.1\|	2.1e-41	34.46	hypothetical protein PRUPE_ppa025068mg, partial [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G013720.1	Lsi07G013720.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 327..368 score: 3.1coord: 642..683 score: 3.1coord: 12..53 score:
None	No IPR available	PANTHER	PTHR33110	FAMILY NOT NAMED	coord: 302..627 score: 7.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi07G013720	CmoCh16G010650	Cucurbita moschata (Rifu)	cmolsiB316
Lsi07G013720	ClCG00G000180	Watermelon (Charleston Gray)	lsiwcgB383
Lsi07G013720	ClCG10G003430	Watermelon (Charleston Gray)	lsiwcgB389
Lsi07G013720	Cp4.1LG14g08370	Cucurbita pepo (Zucchini)	cpelsiB186

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi07G013720	Cucumber (Chinese Long) v3	cuclsiB250
Lsi07G013720	Cucumber (Chinese Long) v3	cuclsiB409
Lsi07G013720	Watermelon (97103) v2	lsiwmbB391
Lsi07G013720	Watermelon (97103) v2	lsiwmbB395
Lsi07G013720	Wax gourd	lsiwgoB541
Lsi07G013720	Cucumber (Gy14) v1	cgylsiB491
Lsi07G013720	Cucumber (Gy14) v1	cgylsiB530
Lsi07G013720	Cucurbita maxima (Rimu)	cmalsiB291
Lsi07G013720	Cucurbita maxima (Rimu)	cmalsiB327
Lsi07G013720	Cucurbita maxima (Rimu)	cmalsiB775
Lsi07G013720	Cucurbita moschata (Rifu)	cmolsiB279
Lsi07G013720	Cucurbita moschata (Rifu)	cmolsiB766
Lsi07G013720	Cucurbita pepo (Zucchini)	cpelsiB156
Lsi07G013720	Cucurbita pepo (Zucchini)	cpelsiB721
Lsi07G013720	Wild cucumber (PI 183967)	cpilsiB227
Lsi07G013720	Wild cucumber (PI 183967)	cpilsiB390
Lsi07G013720	Cucumber (Chinese Long) v2	culsiB228
Lsi07G013720	Cucumber (Chinese Long) v2	culsiB386
Lsi07G013720	Melon (DHL92) v3.5.1	lsimeB426
Lsi07G013720	Melon (DHL92) v3.5.1	lsimeB446
Lsi07G013720	Watermelon (Charleston Gray)	lsiwcgB394
Lsi07G013720	Watermelon (97103) v1	lsiwmB431
Lsi07G013720	Watermelon (97103) v1	lsiwmB454
Lsi07G013720	Cucumber (Gy14) v2	cgyblsiB217
Lsi07G013720	Cucumber (Gy14) v2	cgyblsiB352
Lsi07G013720	Melon (DHL92) v3.6.1	lsimedB446
Lsi07G013720	Melon (DHL92) v3.6.1	lsimedB462
Lsi07G013720	Silver-seed gourd	carlsiB786
Lsi07G013720	Silver-seed gourd	carlsiB854