Lsi07G011930 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G011930
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionGlycine-rich protein-1
Locationchr07 : 17432026 .. 17436963 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGTGAAATTCGATGTGTTTCAATGATAAACAAATTTGGATTACATTTATATGAACCAAATACTTCTAAAATAATCTTAGGTTACTTTCTCGGAATTAAGCTTAAGAACACTCTTTGCTTATTACTTAAAAGCATATAGGAAGTATGGAAAGAAGGCAAGTAAAATAGGTTGTAAATTAATCTGAGGCATTCATTTACTTTTAGAGAATTGTTTAATTGTAACATGAAAGGAAAGTCAGCTTGGAGCCTTTAATAGTATCAATAATACACATCTGAAGCATTTATAGAAAATAGTTGTAACTTGTCGATGTGACCATAGCAACGGTTGATAGACTTAATTGATGACAATGATAGACGTAATAGCAATTAGTCAATTTTGAATCAATTGATGACAATGAGAATCCGTCGTAATAAACTTGACAATGATTGTTTATATAATTGTCAATAATAATTATTCAGTGTTACAATTATTTATTGTCAGTAAAAGTTCAATTATGACATTTTTTAAAAAACTATCACTAATACTCATACTTTTACAGGGAATAACATGACAGAAAATAATTGTCATGAATTTTAATTGTGGCAACTTTTAAATGTCATATAATCACAGTTTTAGGTGTTTACAAGGAAATAGTTCTTAAAGAAATAGTTAGGATGGTTTATACAGATAAGTAATAAGTGATGATGAAAAAGGATGAGATTCAATCAAGTTTCAACTTTAAGAGAAGTAGGTGATAGAATGTGCATGCATTGACATTGCATTTTACCGTATGTTAATGAATCGGATTTATCTTTCAATTCAGTCTTGATTCAAGTATACTTCCTCTGAGAGAGTAAGCAATTAAACTTTTAATGGCTAATTTTAACTTTTGTGGTCGATTCTTAGACATGCAATTTGCCTGAATAACATACAACGTTGACAACGACTATAAAATTATTTGATGGAGAAGAATAACGTAGCCTGCAAAAGAAGAAAAAAACTTGCACATCGAGTTGTGCTCATCACATGCACTCGGATGATAAGTTCCTTTGTTTTGTTATCTACTCTTTAGATTTGTTTTCAAAATTCAATCCAAGTCGTTTTGAAAACTAAGAAAAATTATTTTTTAAAATACATGAAATATGAAAATCAAGATAAAAGAAATTAAGAAAAAAGAAATACAACTTTTATAAACCAGAAATAATTAAAAACAAAATTGTTACCGAATAATATCTTAGTAATTAAATTTAGATATATTCAATCACATATATGTATTTGCGCATATTATATTGGATATGATGAATTATTCTTCTCCATTGCTAATTTATTTTGAAATATATGAAACCCATATTTTCTAATACCAATTTGAGATTATATCTCTTTAAAACGTGATATTATCCCTCCATTATTATTGTATATATGATCAAATGGAATAGATTCTTTAAAGTTTGATCTCTCCTGTGGGAATTAGGGAAATTATTTATAGTAATGCAAAGTGGTTTCAGAACCCATTTCTTCATCTCAATTATGATCTCCATGGCACCTGCAGTACAGAAAGAGAAAATTTAAAAAGAAAAAAGACCTAATAAAATATATGTTCTTTACTTAGTGGATTTTTTTTTCAATTATATCAATATCATAAATTAATCATGCAAATAACTTATAATGGGAAGAATGTTCTTCAAGAAAATAGTCGATGTTCAATGAAATAAATTTTTATCTAAACTATATTAAAAACACCCTTATGTTGATTCACAGCCTATTTGAGATATCTTTGTGCACCTATTTAAACTATATTAAAAACACCCTTATGTTTATCTAAACTATATTAAAAACACCCTTATTTAATGTTTCTTTGAAGGGAGAATTAGGCAAAGAAGCATAAATAATATGTAATAAATTTTTATAGTAATGCGAAATCGTTTCAGCAGCCACTTTCATCTCTCTCAATCTCATGGCAACAACTTAAGTACAAAAACAGAAAAAAGGGAAAAAGAAACCCTAATAAAATATTTGTTCTTTATTTGGTGGATTTTTATAGCCATTAATATTAATTAATCATGAAAAATATGTATGAACAATTATTCTCAAGATAATTCTTGATGAAGAATTATTCTAAGGGTAAACTTTCTTGGTTAACTGAGGAACTTTTTAACTCTTAGGGATCTTTTAGTATGTTCAGAGTTCGTATTAAGTTTGTTAAAGTCTGTGGCTGTTAAGTTTGAATTTGTTAAAACCTATGTTTAGATTTTGTAAATCGATTTTGAAATTCATGGTGGAAACATAAATATATAATTCATAGTAGAATTGGAAATTGGGTGTATGATTTAGAAGATTACATCAGATTTGATATAATATTTTGGAAAGATTGAAATTTTTTAAAAGAGGTAAGATTTGGTATAAGATTTGGAAAGATTACATAATATTTAAAAATTTTATGTGGATATCGGTGTTCAACCCAACGAAATTTCACTGAGAAAGCCAAAAGAATTACTAGTTTGAATATAAGATGAAAACGTTATTTTTTTATTTAAATCTCGGTGTTGATCTCGACTGAGAAGGATCGAAAAAAACTATTTCAACGAGTTTAAAAAAAAATGTGCTAGTTGTGAAAGGGAGAAACATTTGAGAGTTATTTCTGACAATTTTCTAACTTCTATCATTTGGAAAAAAAACAAAAAACAAAAACAAACAAAAACCTACCGCAATAGATTATTCGAAAAAATGTTTGTAAACTACCCTACATTTCAAAAACATAAAACTAAAAATTTTAGAAAAAAATCACTCAAAGAGAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTGTTGCACTAGTAGTTTTATGGAGAATTTTTAAAAATAGAAAAATAAGGGAAACTATTTATACAATATAGCATAATTTTAGATAGTTGCGATAGACGTTGATAGAAGTCTATTGGAGTCTATCAGTGATAGAAATGATAGAAGATGCTGATAGAAATCTATTAATGTCTATCAGTGGTTTTTTCTTTTTGCTATTTTTTGTAAATAGTTTGACATTTTTTTTATTTGTGAAAATTTTCCTAATTTTATCCTCTTGAGAAAAATAAGGTTAACTTACCGCCAATTAAAACAAGTATACCAATGCATTAACATGCGCAAAATTCAACCAACGACATAAAATCTAAACTTTCGACAAAGAGAATAGAAGTTCAAACCTCACACCAACATACGTTAAACTCAAAGATATAGATATATGTATCTAGAAATTAATAGACTCGCCTATTAAAGAATACTATTTTAATGACCATATATTTTAGGTTAATTTTTCTTTGCTATTGTTTTTTTTAACAATATACTAGTAGTAGAAAGATCAGGAGGTGCATCGGAACATCTCAACTAGTTTGACACCTCCTTAACACCCTCATCACACCTCGACACCAAAAAGTTAGATTTTTCTTCGCTATTATTGTTTAAGTTCGACTAGAATTAATCTTGCACCGTGGAAGATGGGATCCAATCCAACAATAATCTAACTTTTGAGCCTAAATGACATGGGCAAAGCCACATTAATTATATATAGTGCTTAATTGCCTCTTGAATCTCCGTTGAGCTATATATCTAAAATTAATCATCTTTTTTTGCACGTGTGCCCTCTTTAATTACACCACACTAACCCTAGCACACTATGGAGAAGCTAATGGATCCTTGTTTCGTTTTCTATATAAGGAGATGGATGGATGCATTCTAGGCATTCCTATCCATGGCTATCCCTAGAGTTGTGTGCCTTGGCTTTCTTCTCTTTATAGGGTTAGGTTTAGCTTCGACTGCCAGAACTCTTCTTGATTATGATTCCCATACACCTCACTATGGTTATGACCGTCCTACTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGCTCTAGTACAGGACATGGAATTGGAGACTCCGCTCTTGGAGGATCGGGACGATATGAAGGTGGTGGAGGACGTGATTCTAGATATGGAGGTCGAAATGATGATCCTGGGGTTGGATATGGAGGTGGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAAGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATGGTGGTGGAGGCAATGGAGATCGTTATGGGCCTTCCTTTGGAGGCTCAGGATATGGAAGTGGCAATGGATATGACCAAGGAAGAGATAATGGTGTGGGTTATGGAAGTAGAGGAGGTAGCAATGGTTATGGAGATTCACATGGCAATGGATATGGAGCACGTGACAATGGCCATGGAGATTCACGTGGATATGGAGCACGTGACAATGGCTATGGAGTAGGAGGCCATGGTGGTGGTTATGATAATAATGGAGGTGTTCATGGAGGACAATATGAGAATAGCAAAGGAAGTGGAGAAGAAGGAGGCTATGATGGTGGATATGCCGTCAAAAACTCCATCTCAAAGGAGAATTGA

mRNA sequence

ATGAATGTTACTTTCTCGGAATTAAGCTTAAGAACACTCTTTGCTTATTACTTAAAAGCATATAGGAAGTATGGAAAGAAGGCAAGGTTAGGTTTAGCTTCGACTGCCAGAACTCTTCTTGATTATGATTCCCATACACCTCACTATGGTTATGACCGTCCTACTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGCTCTAGTACAGGACATGGAATTGGAGACTCCGCTCTTGGAGGATCGGGACGATATGAAGGTGGTGGAGGACGTGATTCTAGATATGGAGGTCGAAATGATGATCCTGGGGTTGGATATGGAGGTGGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAAGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATGGTGGTGGAGGCAATGGAGATCGTTATGGGCCTTCCTTTGGAGGCTCAGGATATGGAAGTGGCAATGGATATGACCAAGGAAGAGATAATGGTGTGGGTTATGGAAGTAGAGGAGGTAGCAATGGTTATGGAGATTCACATGGCAATGGATATGGAGCACGTGACAATGGCCATGGAGATTCACGTGGATATGGAGCACGTGACAATGGCTATGGAGTAGGAGGCCATGGTGGTGGTTATGATAATAATGGAGGTGTTCATGGAGGACAATATGAGAATAGCAAAGGAAGTGGAGAAGAAGGAGGCTATGATGGTGGATATGCCGTCAAAAACTCCATCTCAAAGGAGAATTGA

Coding sequence (CDS)

ATGAATGTTACTTTCTCGGAATTAAGCTTAAGAACACTCTTTGCTTATTACTTAAAAGCATATAGGAAGTATGGAAAGAAGGCAAGGTTAGGTTTAGCTTCGACTGCCAGAACTCTTCTTGATTATGATTCCCATACACCTCACTATGGTTATGACCGTCCTACTCCAAGAGTAGGGTACGATCCTAGCCATCGTGATGAATCCTATGATAATGCATATGGTGGAAGCTCTAGTACAGGACATGGAATTGGAGACTCCGCTCTTGGAGGATCGGGACGATATGAAGGTGGTGGAGGACGTGATTCTAGATATGGAGGTCGAAATGATGATCCTGGGGTTGGATATGGAGGTGGAAATGATGATCGTGGGGTTGGATATGGTAATGGTGGTGGATATGGAAGTGTAGGAGGACATGGTGATGGTTATGGTAGCAATGGTGGTGGAGGCAATGGAGATCGTTATGGGCCTTCCTTTGGAGGCTCAGGATATGGAAGTGGCAATGGATATGACCAAGGAAGAGATAATGGTGTGGGTTATGGAAGTAGAGGAGGTAGCAATGGTTATGGAGATTCACATGGCAATGGATATGGAGCACGTGACAATGGCCATGGAGATTCACGTGGATATGGAGCACGTGACAATGGCTATGGAGTAGGAGGCCATGGTGGTGGTTATGATAATAATGGAGGTGTTCATGGAGGACAATATGAGAATAGCAAAGGAAGTGGAGAAGAAGGAGGCTATGATGGTGGATATGCCGTCAAAAACTCCATCTCAAAGGAGAATTGA

Protein sequence

MNVTFSELSLRTLFAYYLKAYRKYGKKARLGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSTGHGIGDSALGGSGRYEGGGGRDSRYGGRNDDPGVGYGGGNDDRGVGYGNGGGYGSVGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSHGNGYGARDNGHGDSRGYGARDNGYGVGGHGGGYDNNGGVHGGQYENSKGSGEEGGYDGGYAVKNSISKEN
Homology
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BLAST of Lsi07G011930 vs. TrEMBL
Match: A0A0A0L1V3_CUCSA (Glycine-rich protein-1 OS=Cucumis sativus GN=Csa_3G011070 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.7e-59
Identity = 160/235 (68.09%), Postives = 170/235 (72.34%), Query Frame = 1 

Query: 29  RLGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSTGHGIGDSAL 88
           RLGLAS  RTLLDYD  T  YGYDRP+PRVGYDP H DESYD AYGGSSS GHGIGDSAL
Sbjct: 16  RLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAYGGSSSRGHGIGDSAL 75

Query: 89  GGSGRYEGGGGRDSRYGGRNDDPGVGYGGGNDDRGVGYGN-GGGYGSVGGHGDGYGSNGG 148
           GGSG YEGGG  D            GYG  ++DRGVGYGN GGGYG VGGHGDGYG+NGG
Sbjct: 76  GGSG-YEGGGRHD-----------YGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGNNGG 135

Query: 149 GGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSHGNGYGARDNGHGDSR 208
           G  GDRYGPS GGSGYGS              G +G  NGY D H  G GARDN +GDS 
Sbjct: 136 GSYGDRYGPSLGGSGYGS--------------GGKGSGNGY-DDHSRGNGARDNSYGDSH 195

Query: 209 GYGARDNGYGVGGHGGGYDNNGGVHGGQYENSKGSGEEGGYDGGYAVKNSISKEN 263
           G+G RD+GYG GG   G   NGGVHGG+Y+NSKGSGEEGGYDGGYAVKNSISK N
Sbjct: 196 GHGGRDSGYGSGGGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]
BLAST of Lsi07G011930 vs. TrEMBL
Match: A0A0A0L6H2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G010060 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.5e-25
Identity = 120/235 (51.06%), Postives = 132/235 (56.17%), Query Frame = 1 

Query: 30  LGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSTGHGIGDSALG 89
           LGLAS  RTLLDYD     Y YD PTPRVGYDPSHRD+SYDNAY GSSS G+GIGDS LG
Sbjct: 17  LGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAYSGSSSKGYGIGDSTLG 76

Query: 90  GSGRYEGGGGRDSRYGGRNDDPGVGYGGGNDDRGVGYG--NGGGYGSVGGHGDGYGSNGG 149
           GSGRY GG G DS YGGRNDD GVGYGG NDDR  GYG  N       GG  D  G+  G
Sbjct: 77  GSGRYGGGKGHDSGYGGRNDDRGVGYGGRNDDRSTGYGGRNDDRSDGYGGRNDDRGAGYG 136

Query: 150 GGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGG--SNGYG---DSHGNGYGARDNG 209
           G N DR        GYG  N      D   GYG R    S+GYG   D   +GYG R++ 
Sbjct: 137 GRNDDR------SDGYGGRND-----DRSDGYGGRNDDRSDGYGGRNDDRSDGYGGRNDD 196

Query: 210 HGDSRGYGARDNGYGVGGHGGGYDNNGGVHGGQYENSKG-SGEEGGYDGGYAVKN 257
             D  GYG R++    G  G   D + G  G   + S G  G       GY  +N
Sbjct: 197 RSD--GYGGRNDDRSDGYGGRNDDRSDGYGGRNDDRSDGYGGRNDDRSDGYGGRN 238

[Close]
BLAST of Lsi07G011930 vs. TrEMBL
Match: A0A0A0L190_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G010050 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-15
Identity = 49/70 (70.00%), Postives = 52/70 (74.29%), Query Frame = 1 

Query: 30  LGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSTGHGIGDSALG 89
           LGLAS  RTLLDYD     Y YDRPTPRVGYDPSHRD+SYDN YGGSSS G+G GDSALG
Sbjct: 17  LGLASATRTLLDYDPRARRYDYDRPTPRVGYDPSHRDQSYDNVYGGSSSRGYGAGDSALG 76

Query: 90  GSGRYEGGGG 100
                + G G
Sbjct: 77  AKEVEKKGVG 86

[Close]
BLAST of Lsi07G011930 vs. TrEMBL
Match: A0A0A0L1U7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G009540 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.8e-13
Identity = 117/255 (45.88%), Postives = 132/255 (51.76%), Query Frame = 1 

Query: 30  LGLASTARTLLDYDSHTPHYGYDR-----PTPRVGYDPSHRDESY------DNAYGGSSS 89
           LGLAS AR+LL YD      GYD        P+VGY+   RD  Y      D  YGG + 
Sbjct: 17  LGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGYYHDRDHHDAPYGGGAG 76

Query: 90  TGHGIG---DSALGGSGRYEGGGGRDSRYGG-RNDDPGVGYGGG--------NDDRGVGY 149
            G+G G    S+LGGSG Y  GGG  S YGG  N + G G GGG        +D  G GY
Sbjct: 77  GGYGAGAGAGSSLGGSG-YGSGGGGGSGYGGVGNHEVGYGSGGGGGYGAGVGSDLGGSGY 136

Query: 150 ------GNGGGYGSVGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYG 209
                 G+GGGYG +GG G GYGS GGGG+G   G    G GYGSG G   G   G G G
Sbjct: 137 GSGGGGGSGGGYGDLGGRGKGYGSGGGGGSG-YGGRGDHGVGYGSGGGGGYGSGVGGGAG 196

Query: 210 SRGGSNGYGDSHGNGYGARDNGHGDSRGYGARDNGYGVGGHGGGYDNNGGVHGGQYEN-- 254
                 GYG   G G G   +G+G S+GYG      G  G GGG    GG HG  Y +  
Sbjct: 197 VVDHGVGYGSGGGGGAG---SGYGGSKGYG------GGSGGGGGAGYGGGAHGSGYGSGG 256

[Close]
BLAST of Lsi07G011930 vs. TrEMBL
Match: Q9ZWM2_CUCSA (Glycine-rich protein-2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.8e-13
Identity = 117/255 (45.88%), Postives = 132/255 (51.76%), Query Frame = 1 

Query: 30  LGLASTARTLLDYDSHTPHYGYDR-----PTPRVGYDPSHRDESY------DNAYGGSSS 89
           LGLAS AR+LL YD      GYD        P+VGY+   RD  Y      D  YGG + 
Sbjct: 17  LGLASAARSLLSYDIPPHRSGYDNYDHPVVNPKVGYEHDRRDGYYHDRDHHDAPYGGGAG 76

Query: 90  TGHGIG---DSALGGSGRYEGGGGRDSRYGG-RNDDPGVGYGGG--------NDDRGVGY 149
            G+G G    S+LGGSG Y  GGG  S YGG  N + G G GGG        +D  G GY
Sbjct: 77  GGYGAGAGAGSSLGGSG-YGSGGGGGSGYGGVGNHEVGYGSGGGGGYGAGVGSDLGGSGY 136

Query: 150 GN------GGGYGSVGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYG 209
           G+      GGGYG +GG G GYGS GGGG+G   G    G GYGSG G   G   G G G
Sbjct: 137 GSGGGGGTGGGYGDLGGRGKGYGSGGGGGSG-YGGRGDHGVGYGSGGGGGYGSGVGGGAG 196

Query: 210 SRGGSNGYGDSHGNGYGARDNGHGDSRGYGARDNGYGVGGHGGGYDNNGGVHGGQYEN-- 254
                 GYG   G G G   +G+G S+GYG      G  G GGG    GG HG  Y +  
Sbjct: 197 VVDHGVGYGSGGGGGAG---SGYGGSKGYG------GGSGGGGGAGYGGGAHGSGYGSGG 256

[Close]
BLAST of Lsi07G011930 vs. NCBI nr
Match: gi|659096568|ref|XP_008449165.1| (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo])

HSP 1 Score: 261.9 bits (668), Expect = 1.2e-66
Identity = 165/233 (70.82%), Postives = 175/233 (75.11%), Query Frame = 1 

Query: 30  LGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSTGHGIGDSALG 89
           LGLAS  RTLLDYD  T HYGYDRP+PRVGYDP HRDESYDNAYGGSSS GHGIGDSALG
Sbjct: 17  LGLASATRTLLDYDPRTRHYGYDRPSPRVGYDPGHRDESYDNAYGGSSSRGHGIGDSALG 76

Query: 90  GSGRYEGGGGRDSRYGGRNDDPGVGYGGGNDDRGVGYGNGGGYGSVGGHGDGYGSNGGGG 149
           GSG YEGGG RD  YG RN           D+RGVGYGNGGGYG VGGHGDGYG+NGGGG
Sbjct: 77  GSG-YEGGGRRDYGYGDRN-----------DNRGVGYGNGGGYGGVGGHGDGYGNNGGGG 136

Query: 150 NGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSHGNGYGARDNGHGDSRGY 209
            GDRYGPS GGSGYGS              G +G  NGY D H +GYG RDNG+GDS G+
Sbjct: 137 YGDRYGPSLGGSGYGS--------------GGKGSDNGYDDRHSHGYGGRDNGYGDSHGH 196

Query: 210 GARDNGYGVGGHGGGYDNNGGVHGGQYENSKGSGEEGGYDGGYAVKNSISKEN 263
             RD+GYG GG   G   NGGVHGG+Y+NSKGSGEEGGYDGGYAVKNSISK N
Sbjct: 197 EGRDSGYGSGGGVSGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]
BLAST of Lsi07G011930 vs. NCBI nr
Match: gi|778688294|ref|XP_011652712.1| (PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis sativus])

HSP 1 Score: 237.7 bits (605), Expect = 2.4e-59
Identity = 160/235 (68.09%), Postives = 170/235 (72.34%), Query Frame = 1 

Query: 29  RLGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSTGHGIGDSAL 88
           RLGLAS  RTLLDYD  T  YGYDRP+PRVGYDP H DESYD AYGGSSS GHGIGDSAL
Sbjct: 16  RLGLASATRTLLDYDPRTLQYGYDRPSPRVGYDPGHGDESYDKAYGGSSSRGHGIGDSAL 75

Query: 89  GGSGRYEGGGGRDSRYGGRNDDPGVGYGGGNDDRGVGYGN-GGGYGSVGGHGDGYGSNGG 148
           GGSG YEGGG  D            GYG  ++DRGVGYGN GGGYG VGGHGDGYG+NGG
Sbjct: 76  GGSG-YEGGGRHD-----------YGYGDRHNDRGVGYGNYGGGYGGVGGHGDGYGNNGG 135

Query: 149 GGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSHGNGYGARDNGHGDSR 208
           G  GDRYGPS GGSGYGS              G +G  NGY D H  G GARDN +GDS 
Sbjct: 136 GSYGDRYGPSLGGSGYGS--------------GGKGSGNGY-DDHSRGNGARDNSYGDSH 195

Query: 209 GYGARDNGYGVGGHGGGYDNNGGVHGGQYENSKGSGEEGGYDGGYAVKNSISKEN 263
           G+G RD+GYG GG   G   NGGVHGG+Y+NSKGSGEEGGYDGGYAVKNSISK N
Sbjct: 196 GHGGRDSGYGSGGGVTGGYGNGGVHGGEYDNSKGSGEEGGYDGGYAVKNSISKGN 223

[Close]
BLAST of Lsi07G011930 vs. NCBI nr
Match: gi|659095616|ref|XP_008448676.1| (PREDICTED: glycine-rich cell wall structural protein 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 208.0 bits (528), Expect = 2.0e-50
Identity = 159/265 (60.00%), Postives = 169/265 (63.77%), Query Frame = 1 

Query: 30  LGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSTGHGIGDSALG 89
           LGLAS ARTLLDYD  T +YGYDRPTPRVGYDPSHRDESYDN YGGSSS GHGIGDSALG
Sbjct: 17  LGLASAARTLLDYDPRTRYYGYDRPTPRVGYDPSHRDESYDNVYGGSSSKGHGIGDSALG 76

Query: 90  GSGRYEGGGGRDSRYGGRNDDPGVGYGGGNDDRGVGYGNGGGYGSVGGHGDGYGSNGGGG 149
           GS   E  GGR  +YGGRNDD            GVGYGNGGGYGSVGGHGDGYG+NGGGG
Sbjct: 77  GS---EHEGGRHYQYGGRNDD-----------HGVGYGNGGGYGSVGGHGDGYGNNGGGG 136

Query: 150 NGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGGSNGYGDSHGNGYGARD------NGH 209
           +GD YG +  G GYGS  G+      G GYG+ GG  G    HG+GYG          GH
Sbjct: 137 HGDGYGNN--GGGYGSVGGH------GDGYGNNGGGYGSVGGHGDGYGNNGGGYGSVGGH 196

Query: 210 GDSRG----------YGARDNGYGVGGHGG------------GYDN----NGGVHGGQYE 263
           GD  G          YG    G G G  GG            GY +    NGGVH G+Y 
Sbjct: 197 GDGYGNNGGGGYGDRYGPSLGGSGYGSSGGKGSGNGYGDSSHGYGSGGYGNGGVHEGEYG 256

[Close]
BLAST of Lsi07G011930 vs. NCBI nr
Match: gi|659096566|ref|XP_008449164.1| (PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo])

HSP 1 Score: 185.7 bits (470), Expect = 1.1e-43
Identity = 158/289 (54.67%), Postives = 173/289 (59.86%), Query Frame = 1 

Query: 30  LGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSTGHGIGDSALG 89
           LGLAS ARTLLDYD  T  Y YD PTPRVGYDPSHRD+SYDNAYGGSS+ G+G+GDSALG
Sbjct: 17  LGLASAARTLLDYDPRTRRYDYDHPTPRVGYDPSHRDQSYDNAYGGSSNRGYGVGDSALG 76

Query: 90  GSGRYEGGGGRDSRYGGRNDDPGV--------------------------GYGGGNDDRG 149
           GSGRYEGGGG D  YGGRNDD GV                          GYGG NDDRG
Sbjct: 77  GSGRYEGGGGHDYGYGGRNDDRGVGYGGRNDDHGAGYGAGYGGRNDDRGAGYGGRNDDRG 136

Query: 150 VGYG-----NGGGYGSVGGHGDGYGSNGGGGNGDRYGPSFGGSGYGSGNGYDQGRDNGVG 209
            GYG     +G GY   GG  D  G+  GG N DR      G GYG+G GY     +G G
Sbjct: 137 AGYGRRNDDHGAGY---GGRNDDRGAGYGGRNDDR------GVGYGNGGGYGGVGGHGDG 196

Query: 210 YGSRGGSNGYGDSH-----GNGYGARDNGHGDSRGYG-------ARDNGYGVG-GHGG-- 263
           YG+  G  GYGD +     G+GYG  + G G   GY          DNGYG   GHGG  
Sbjct: 197 YGNNVG-GGYGDRYSPSLGGSGYG--NGGKGSGNGYDDHSRGYGGHDNGYGDSHGHGGRD 256

[Close]
BLAST of Lsi07G011930 vs. NCBI nr
Match: gi|778688292|ref|XP_011652711.1| (PREDICTED: stress protein DDR48-like [Cucumis sativus])

HSP 1 Score: 123.6 bits (309), Expect = 5.0e-25
Identity = 120/235 (51.06%), Postives = 132/235 (56.17%), Query Frame = 1 

Query: 30  LGLASTARTLLDYDSHTPHYGYDRPTPRVGYDPSHRDESYDNAYGGSSSTGHGIGDSALG 89
           LGLAS  RTLLDYD     Y YD PTPRVGYDPSHRD+SYDNAY GSSS G+GIGDS LG
Sbjct: 78  LGLASATRTLLDYDPRARRYDYDHPTPRVGYDPSHRDQSYDNAYSGSSSKGYGIGDSTLG 137

Query: 90  GSGRYEGGGGRDSRYGGRNDDPGVGYGGGNDDRGVGYG--NGGGYGSVGGHGDGYGSNGG 149
           GSGRY GG G DS YGGRNDD GVGYGG NDDR  GYG  N       GG  D  G+  G
Sbjct: 138 GSGRYGGGKGHDSGYGGRNDDRGVGYGGRNDDRSTGYGGRNDDRSDGYGGRNDDRGAGYG 197

Query: 150 GGNGDRYGPSFGGSGYGSGNGYDQGRDNGVGYGSRGG--SNGYG---DSHGNGYGARDNG 209
           G N DR        GYG  N      D   GYG R    S+GYG   D   +GYG R++ 
Sbjct: 198 GRNDDR------SDGYGGRND-----DRSDGYGGRNDDRSDGYGGRNDDRSDGYGGRNDD 257

Query: 210 HGDSRGYGARDNGYGVGGHGGGYDNNGGVHGGQYENSKG-SGEEGGYDGGYAVKN 257
             D  GYG R++    G  G   D + G  G   + S G  G       GY  +N
Sbjct: 258 RSD--GYGGRNDDRSDGYGGRNDDRSDGYGGRNDDRSDGYGGRNDDRSDGYGGRN 299

The following BLAST results are available for this feature:
BLAST of Lsi07G011930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi07G011930 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1V3_CUCSA1.7e-5968.09Glycine-rich protein-1 OS=Cucumis sativus GN=Csa_3G011070 PE=4 SV=1[more]
A0A0A0L6H2_CUCSA3.5e-2551.06Uncharacterized protein OS=Cucumis sativus GN=Csa_3G010060 PE=4 SV=1[more]
A0A0A0L190_CUCSA1.5e-1570.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G010050 PE=4 SV=1[more]
A0A0A0L1U7_CUCSA1.8e-1345.88Uncharacterized protein OS=Cucumis sativus GN=Csa_3G009540 PE=4 SV=1[more]
Q9ZWM2_CUCSA1.8e-1345.88Glycine-rich protein-2 (Fragment) OS=Cucumis sativus PE=2 SV=1[more]
BLAST of Lsi07G011930 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Lsi07G011930 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659096568|ref|XP_008449165.1|1.2e-6670.82PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo][more]
gi|778688294|ref|XP_011652712.1|2.4e-5968.09PREDICTED: glycine-rich cell wall structural protein 2-like [Cucumis sativus][more]
gi|659095616|ref|XP_008448676.1|2.0e-5060.00PREDICTED: glycine-rich cell wall structural protein 2-like isoform X1 [Cucumis ... [more]
gi|659096566|ref|XP_008449164.1|1.1e-4354.67PREDICTED: glycine-rich cell wall structural protein 1.0-like [Cucumis melo][more]
gi|778688292|ref|XP_011652711.1|5.0e-2551.06PREDICTED: stress protein DDR48-like [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G011930.1Lsi07G011930.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi07G011930Silver-seed gourdcarlsiB451
Lsi07G011930Silver-seed gourdcarlsiB721
Lsi07G011930Silver-seed gourdcarlsiB889
Lsi07G011930Silver-seed gourdcarlsiB882
Lsi07G011930Cucumber (Chinese Long) v3cuclsiB250
Lsi07G011930Cucumber (Chinese Long) v3cuclsiB251
Lsi07G011930Watermelon (97103) v2lsiwmbB395
Lsi07G011930Watermelon (97103) v2lsiwmbB418
Lsi07G011930Wax gourdlsiwgoB539
Lsi07G011930Wax gourdlsiwgoB566
Lsi07G011930Bottle gourd (USVL1VR-Ls)lsilsiB000
Lsi07G011930Cucumber (Gy14) v1cgylsiB510
Lsi07G011930Cucumber (Gy14) v1cgylsiB530
Lsi07G011930Cucurbita maxima (Rimu)cmalsiB324
Lsi07G011930Cucurbita maxima (Rimu)cmalsiB496
Lsi07G011930Cucurbita maxima (Rimu)cmalsiB591
Lsi07G011930Cucurbita maxima (Rimu)cmalsiB772
Lsi07G011930Cucurbita moschata (Rifu)cmolsiB313
Lsi07G011930Cucurbita moschata (Rifu)cmolsiB481
Lsi07G011930Cucurbita moschata (Rifu)cmolsiB574
Lsi07G011930Cucurbita moschata (Rifu)cmolsiB763
Lsi07G011930Cucurbita pepo (Zucchini)cpelsiB183
Lsi07G011930Cucurbita pepo (Zucchini)cpelsiB218
Lsi07G011930Cucurbita pepo (Zucchini)cpelsiB630
Lsi07G011930Cucurbita pepo (Zucchini)cpelsiB725
Lsi07G011930Wild cucumber (PI 183967)cpilsiB227
Lsi07G011930Wild cucumber (PI 183967)cpilsiB228
Lsi07G011930Cucumber (Chinese Long) v2culsiB228
Lsi07G011930Cucumber (Chinese Long) v2culsiB229
Lsi07G011930Melon (DHL92) v3.5.1lsimeB439
Lsi07G011930Melon (DHL92) v3.5.1lsimeB446
Lsi07G011930Watermelon (Charleston Gray)lsiwcgB385
Lsi07G011930Watermelon (Charleston Gray)lsiwcgB389
Lsi07G011930Watermelon (97103) v1lsiwmB424
Lsi07G011930Watermelon (97103) v1lsiwmB429
Lsi07G011930Cucumber (Gy14) v2cgyblsiB217
Lsi07G011930Cucumber (Gy14) v2cgyblsiB218
Lsi07G011930Melon (DHL92) v3.6.1lsimedB458
Lsi07G011930Melon (DHL92) v3.6.1lsimedB462