Lsi07G009820 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCTCGAAAAGACGAAAGGGCATAAGGGTAAAATCCACCAACCAATCTCCACCCAAAAGAACCCAACAAAGCAATTTTAATAGGTTGCTATAAATACATCCATGAAAGCCAAACAAATGCAAAATTTTGTAGGATAAGCATTGAAAAACATACCCAAAAATCCCAAAAGAGAAAAGAAAAAAAAAATGAGACCTACAACTTCAAGTCCAAGTTCAAGAAACTCCACCGGCGCCATAGACACCGGCTTCGGAAACTGGCACTCTCCAATCCCTTATCTTTTCACAGGTTTAGCTATAGTTTTGGGTCTCATCGCCATCGCATTGCTCATCCTCTCGTGCTCCTATCTACATTCTCCTCCCGATTCCGACTCCCGTTCGACCGCCCCCGCCGCCACCGACGAAGAAAAGCCTCCCAACCGCAGCCAGGATTTGGAGCCGACCATTGTCGTTATTATGGCCGGCGATGATAACCCTACCTTCTTCGCCAAACAGACAGCCCTCTAACTGTAAAGATTATGTTCTCTTTTTTTTCTTCTTTTTTTTTTTATAGATTTTTTAAGGTGTATTACTTGTGATCTGTTTTGTGGGGGTTTTCCATGTGATCTAACTGATCTTCTTCATCATTTTTCAGAAATTTTGATGTATATAACTTTCTTAACCTTATACATGTGTGTATGTGTAGTGTAGTTTTAAATAGGTTAAAATATCATTTTGGTTCTTATACTTTTAAATTTGTTCAATTTTTATTTTTATACTTTTAAATATCTAATTTTAGTTCCTCCCTACTTTCAATATATCTTAAATTTAGTCTATACTATTAGTTTATTGTGAATTTTTTCATTACTTTATATCTTGTATTATCATTTTCACTATAATTTTTAAAAAATATATTCACATATGACGTTTCTTTCTACCAAAATTATTAAGATTATTTAATCAATTTCAATAAAAGTTAACTTCGAATGACTAAATTTAAGATTTATTAAAAATATAGCTAAAAACTTTTGAGGGTGTAATTGGGTGAATTTGAGATGGGTGTTAGAATAGAGTGGAACAATTGTAGCCATTTTAAAAAGTCCTACACTTGAAGTTTTCTATTTTATTATCTACTTTTATTTAGTGCTTTAAAAACAAGCCAATTTTAATTAAAAAATAGATTTTGTTTTTGAAAAGTAACATTGTTATCCAATAGAGCCTACGCTTTGGTCTTTCGAAATCAGTGTCGATTTTTTTTTAACAAAGAAATTAGTGTCTATTTAATGCTTGTGTTTTAACAAAATTTAAATAGATATTATTTATAATAATTAGAGAGTGTTTTAGTGTATGCTATTTTTAGCATTGAAGCTAAGTAAATGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGATGAAATTTAATAAGAAGCAAACTCAATGCTTGGTGAAGGGTGTTTTTGGGAGTTTGAAAAATTGCCTTAAGACAATCATTACAAGGTAAATTGATGGTTCAAGTTAGGGAGAATGTGGACATCACCCAAAAGAAAAAGCATCAACTTTTTTGTTTTGTTTTTTCTAAAGTGATATATAAACATATATATTTGCAGTGGGAATAAGTAAGGAGATTTCAAAATGAAAGGTCATATGGGACACAATAATTGTACTTTTAATTTTGTATTCCTTTCCGAAAAGAAAGTAAAGGATTAATCATAGTTTTTTTTTTCCTTTCTTTATTCCTTTTTTATAAATAAGGTTTAGTAATGGATTGATTTGTTATGTAGGTACACATTTTGGCATGAAAATCTATCCATTTGAAATTAGGAATCTTTTTGTGTTGAGAACTCTTAATTATCAATTACTAAAACCATTAAAATTAATTAGTACAACTTTAAGAGAGTGTTAGATAAGATTATGGTTATGGGTAAAAAAATATATCTAAGTATTTAGCTTGGAAAAAATGATGCACTTATCATTTCAAAGAAAGTGAGTTATATGGCTTAGTATGGGACCAACCCATAGACTCAATGATGAGGACTAAAGAGATCAATCCATCATGTGGTCAACAAGATCGAGGTTAATACATAGAGTCGACTATAGAGACTTTATGAAGACAACCCATAGGGTCGACCATGATGGTCAAAGTATGCCCAAGTGTTTGTCTATTGGTTAAGGTCTACTAATGAGATTATATGTAATGGTCAGGTTAAGTTAGTCATGGTCAAATTAATTATTTGAGAGAATATTTAATCAAGTGGCTGTTATAGGATAATTTTTCTATATAATAAGAAGGCTTGATGAGGTATATAGTGTAACACTCTGAATTCTCTAGCATCGAGCTCTCGATCAAGATAGTAACTAACTTGATCATTGAAGTATTGGTGGTCAAGCGTCATACCGATGTAAGATTTTCTTTATTGTGTAGGGTGATTGTTTGGTTCCTCCCAATTATTACAAATTCATCGTTGATACCAATTTTCGGTATCAATAGTTACTTTGTGATTGAAGACCAGAAGGTAAGGAGAACTAGTTACCCTACTCAAGGTTTGAACACTCCAAAAGCAAGCTGATCAATCTTACCTGAATGCTCAAACATGCAATCCTAAATCACGAATTGCAAATGATGGTGATGAAGCTCATTCATCAACACAGAGCAAAAGTCTCATTCCCAAAATTTAAAATCCAAAAAAAAGAAAAAATGGTAAAATGTCATTTTCAAACCCATAGGACCATTCAGCTTAGGACAATTGCCAAAAATAGGACAATTTCATATGGCCTAAAGAGTTTTGAGATCAATTTTTAAAAAGAAGACTTTTGGGACAAATGAACATGCGAAACGTCTAAATTTTCCTTAGTAAAAAAAACAAAAAATGTTTAGCCCTCTCCTCCATCTTTTCGACACCCATATTTGTGATTCCCATCTTCTCTCGCGCCACAGGTTACATGGGCAGACAAATAGTAGGAGACTTTAGACGACAATGAGGCGAGGCGAGGCGAGGCGAGGCAACTATGAACAGCAGCAACGCGATTTAGACAATGTGATGATGAGATTTAAACGGTGCAACAGGCAACTTCAAATGATGGGGGAAGCGACTTCTAGCGATGTGACAAGGCAACTTTGGCCGGTGAGGTGACATCAGACGGTGTGGCAACTCCCATTTCTTTACTCAACTTCTTACTAGGTGAGAAAATTTCGTTTAGGTTACTGATTTTTGTTGAGGAGAAGTTCATTTGGGTCAATGAAATTATTTTTATTGGTGAAAAAATTTCGTTTGCTTAGACTAGCCAAGAAAAGTTATACTTCTTGTATAACAAAATGTTTATTGATTTTTTTTTCCGAATATTCTTTATTGATTTATGCTTTTTTTTCGTTTTTTAGAACAAGGTTCCATCAAAAAGTGTTTCTGAAGCACTTTTTGAGTAATGGGAAGGTCGTAATGGCAGTTTACATCATTTCAGAACTTGGGGATGTCTAACATATGTGCTAACAACAAACCCAAAGAAATTGGAACCTCGTTCAAGAGTATGCCTATTTGTATGTTATCCCAAAAAGACAAGGGGTGAACTCTTTTATGATCCTAAGGATAATAAGGTATTTGTATCGACAAATGTCACATTCTTAGAGGAAGATCATATGAGAGATCACAAATCGCATAGTAAATTAATTTTGGGTGAACTTTCTAATGAAAATGATAGTACGTCAACAAGAGTTGTTGACAATGCTGGTACATTAACAAGAGTTGACGATTCTAGCACATCTAGTCAAAATCCTTCTCAATAGTTGTGAGAGCCCCATCTTAGTGGCAGGGTTATATCCTATCTTATGCGATATATGGGTTTAACAGAAACCCAAGTCATCATATCTAATGATGGTGTTGAGGATCCATTGTCTTTTTAAGCAGGCAATAGAAGATGTTGACAGAGATGAATGGGTCAAAGTTATGACTCTTAAAATAGACTCTACGTATTCCAATTCAGTTTGGGATCTTGTTGATAGCTCTCGAAAAGAGCTATTATTATGTCTTTAATCTAGCTTGCTTGTTATACTTTATATGATTAAATGTCATTAGTTCATGCATTTCGGAGTGTTACAGGCCGTTCAAAATTGATTTGGAGCTATCAGAAATGAAATTGGACACTCGGAGCTTCAAAGACGTGAAATGACCAAATTACCCCTGATGGTCAGCGTAGCTGCGCTCTAGGAAGCGCAGCGCTACGTTGCAAGGCAGTAACGAGCGTTGCCGAAAATTGGAGAGGCAACGTAGCTACACTACGG TTTCTCGAAAAGACGAAAGGGCATAAGGGTAAAATCCACCAACCAATCTCCACCCAAAAGAACCCAACAAAGCAATTTTAATAGGTTGCTATAAATACATCCATGAAAGCCAAACAAATGCAAAATTTTGTAGGATAAGCATTGAAAAACATACCCAAAAATCCCAAAAGAGAAAAGAAAAAAAAAATGAGACCTACAACTTCAAGTCCAAGTTCAAGAAACTCCACCGGCGCCATAGACACCGGCTTCGGAAACTGGCACTCTCCAATCCCTTATCTTTTCACAGGTTTAGCTATAGTTTTGGGTCTCATCGCCATCGCATTGCTCATCCTCTCGTGCTCCTATCTACATTCTCCTCCCGATTCCGACTCCCGTTCGACCGCCCCCGCCGCCACCGACGAAGAAAAGCCTCCCAACCGCAGCCAGGATTTGGAGCCGACCATTGTCGTTATTATGGCCGGCGATGATAACCCTACCTTCTTCGCCAAACAGACAGCCCTCTAAGTTACATGGGCAGACAAATAGTAGGAGACTTTAGACGACAATGAGGCGAGGCGAGGCGAGGCGAGGCAACTATGAACAGCAGCAACGCGATTTAGACAATGTGATGATGAGATTTAAACGGTGCAACAGGCAACTTCAAATGATGGGGGAAGCGACTTCTAGCGATGTGACAAGGCAACTTTGGCCGGTGAGGTGACATCAGACGGTGTGGCAACTCCCATTTCTTTACTCAACTTCTTACTAGAACAAGGTTCCATCAAAAAGTGTTTCTGAAGCACTTTTTGAGTAATGGGAAGGTCGTAATGGCAGTTTACATCATTTCAGAACTTGGGGATGTCTAACATATGTGCTAACAACAAACCCAAAGAAATTGGAACCTCGTTCAAGAGTATGCCTATTTGTATGTTATCCCAAAAAGACAAGGGGTGAACTCTTTTATGATCCTAAGGATAATAAGGTATTTGTATCGACAAATGTCACATTCTTAGAGGAAGATCATATGAGAGATCACAAATCGCATAGTAAATTAATTTTGGGTGAACTTTCTAATGAAAATGATAGTACGTCAACAAGAGTTGTTGACAATGCTGGTACATTAACAAGAGTTGACGATTCTAGCACATCTAGTCAAAATCCTTCTCAATAGTTGTGAGAGCCCCATCTTAGTGGCAGGGTTATATCCTATCTTATGCGATATATGGGTTTAACAGAAACCCAAGTCATCATATCTAATGATGGTGTTGAGGATCCATTGTCTTTTTAAGCAGGCAATAGAAGATGTTGACAGAGATGAATGGGTCAAAGTTATGACTCTTAAAATAGACTCTACGTATTCCAATTCAGTTTGGGATCTTGTTGATAGCTCTCGAAAAGAGCTATTATTATGTCTTTAATCTAGCTTGCTTGTTATACTTTATATGATTAAATGTCATTAGTTCATGCATTTCGGAGTGTTACAGGCCGTTCAAAATTGATTTGGAGCTATCAGAAATGAAATTGGACACTCGGAGCTTCAAAGACGTGAAATGACCAAATTACCCCTGATGGTCAGCGTAGCTGCGCTCTAGGAAGCGCAGCGCTACGTTGCAAGGCAGTAACGAGCGTTGCCGAAAATTGGAGAGGCAACGTAGCTACACTACGG ATGAGACCTACAACTTCAAGTCCAAGTTCAAGAAACTCCACCGGCGCCATAGACACCGGCTTCGGAAACTGGCACTCTCCAATCCCTTATCTTTTCACAGGTTTAGCTATAGTTTTGGGTCTCATCGCCATCGCATTGCTCATCCTCTCGTGCTCCTATCTACATTCTCCTCCCGATTCCGACTCCCGTTCGACCGCCCCCGCCGCCACCGACGAAGAAAAGCCTCCCAACCGCAGCCAGGATTTGGAGCCGACCATTGTCGTTATTATGGCCGGCGATGATAACCCTACCTTCTTCGCCAAACAGACAGCCCTCTAA MRPTTSSPSSRNSTGAIDTGFGNWHSPIPYLFTGLAIVLGLIAIALLILSCSYLHSPPDSDSRSTAPAATDEEKPPNRSQDLEPTIVVIMAGDDNPTFFAKQTAL
BLAST of Lsi07G009820 vs. Swiss-Prot
Match: GDU4_ARATH (Protein GLUTAMINE DUMPER 4 OS=Arabidopsis thaliana GN=GDU4 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 2.1e-11 Identity = 53/120 (44.17%), Postives = 63/120 (52.50%), Query Frame = 1
BLAST of Lsi07G009820 vs. Swiss-Prot
Match: GDU1_ARATH (Protein GLUTAMINE DUMPER 1 OS=Arabidopsis thaliana GN=GDU1 PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 6.9e-10 Identity = 43/85 (50.59%), Postives = 53/85 (62.35%), Query Frame = 1
BLAST of Lsi07G009820 vs. Swiss-Prot
Match: GDU2_ARATH (Protein GLUTAMINE DUMPER 2 OS=Arabidopsis thaliana GN=GDU2 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 6.9e-10 Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 1
BLAST of Lsi07G009820 vs. Swiss-Prot
Match: GDU5_ARATH (Protein GLUTAMINE DUMPER 5 OS=Arabidopsis thaliana GN=GDU5 PE=2 SV=2) HSP 1 Score: 64.3 bits (155), Expect = 9.0e-10 Identity = 41/86 (47.67%), Postives = 50/86 (58.14%), Query Frame = 1
BLAST of Lsi07G009820 vs. Swiss-Prot
Match: GDU3_ARATH (Protein GLUTAMINE DUMPER 3 OS=Arabidopsis thaliana GN=GDU3 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 8.4e-08 Identity = 37/84 (44.05%), Postives = 44/84 (52.38%), Query Frame = 1
BLAST of Lsi07G009820 vs. TrEMBL
Match: A0A0A0KVV2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G122800 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 4.3e-43 Identity = 91/105 (86.67%), Postives = 95/105 (90.48%), Query Frame = 1
BLAST of Lsi07G009820 vs. TrEMBL
Match: A0A061ENI6_THECC (Glutamine dumper 2, putative OS=Theobroma cacao GN=TCM_019105 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 9.1e-17 Identity = 50/96 (52.08%), Postives = 68/96 (70.83%), Query Frame = 1
BLAST of Lsi07G009820 vs. TrEMBL
Match: B9TNZ9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_2028990 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.2e-15 Identity = 49/100 (49.00%), Postives = 68/100 (68.00%), Query Frame = 1
BLAST of Lsi07G009820 vs. TrEMBL
Match: W9RDY4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_000167 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 5.0e-15 Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 1
BLAST of Lsi07G009820 vs. TrEMBL
Match: B9SXU4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0877440 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 5.0e-15 Identity = 50/99 (50.51%), Postives = 64/99 (64.65%), Query Frame = 1
BLAST of Lsi07G009820 vs. TAIR10
Match: AT2G24762.1 (AT2G24762.1 glutamine dumper 4) HSP 1 Score: 69.7 bits (169), Expect = 1.2e-12 Identity = 53/120 (44.17%), Postives = 63/120 (52.50%), Query Frame = 1
BLAST of Lsi07G009820 vs. TAIR10
Match: AT4G31730.1 (AT4G31730.1 glutamine dumper 1) HSP 1 Score: 64.7 bits (156), Expect = 3.9e-11 Identity = 43/85 (50.59%), Postives = 53/85 (62.35%), Query Frame = 1
BLAST of Lsi07G009820 vs. TAIR10
Match: AT4G25760.1 (AT4G25760.1 glutamine dumper 2) HSP 1 Score: 64.7 bits (156), Expect = 3.9e-11 Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 1
BLAST of Lsi07G009820 vs. TAIR10
Match: AT5G24920.1 (AT5G24920.1 glutamine dumper 5) HSP 1 Score: 64.3 bits (155), Expect = 5.1e-11 Identity = 41/86 (47.67%), Postives = 50/86 (58.14%), Query Frame = 1
BLAST of Lsi07G009820 vs. TAIR10
Match: AT5G57685.1 (AT5G57685.1 glutamine dumper 3) HSP 1 Score: 57.8 bits (138), Expect = 4.8e-09 Identity = 37/84 (44.05%), Postives = 44/84 (52.38%), Query Frame = 1
BLAST of Lsi07G009820 vs. NCBI nr
Match: gi|659111098|ref|XP_008455577.1| (PREDICTED: protein GLUTAMINE DUMPER 4 [Cucumis melo]) HSP 1 Score: 183.3 bits (464), Expect = 2.1e-43 Identity = 91/105 (86.67%), Postives = 96/105 (91.43%), Query Frame = 1
BLAST of Lsi07G009820 vs. NCBI nr
Match: gi|449438981|ref|XP_004137266.1| (PREDICTED: protein GLUTAMINE DUMPER 4 [Cucumis sativus]) HSP 1 Score: 181.8 bits (460), Expect = 6.2e-43 Identity = 91/105 (86.67%), Postives = 95/105 (90.48%), Query Frame = 1
BLAST of Lsi07G009820 vs. NCBI nr
Match: gi|590651722|ref|XP_007032963.1| (Glutamine dumper 2, putative [Theobroma cacao]) HSP 1 Score: 94.4 bits (233), Expect = 1.3e-16 Identity = 50/96 (52.08%), Postives = 68/96 (70.83%), Query Frame = 1
BLAST of Lsi07G009820 vs. NCBI nr
Match: gi|255618736|ref|XP_002539968.1| (PREDICTED: protein GLUTAMINE DUMPER 2 [Ricinus communis]) HSP 1 Score: 89.7 bits (221), Expect = 3.2e-15 Identity = 49/100 (49.00%), Postives = 68/100 (68.00%), Query Frame = 1
BLAST of Lsi07G009820 vs. NCBI nr
Match: gi|703115454|ref|XP_010100897.1| (hypothetical protein L484_009667 [Morus notabilis]) HSP 1 Score: 88.6 bits (218), Expect = 7.1e-15 Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|