Lsi07G008190 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi07G008190
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Phytoene synthase 3
Location	chr07 : 9123302 .. 9126554 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAGAAGAGAAGCAGCAAGACCCAATAAAATATTGGGGGGGGTTTTGTGGATAGTTGTGAAGAAGATGTCTGGTGTCAATGCCAACTCTCTGCTGAGCCCCAAGCCAAGAATCAGAATCAGCAGCAACCCATTTGGGTCTAAAAGATTGAGTTTCTTTTCTGATGGGGTTTTGGCTTCCTCTGCTGCTGTGGTGAATCCTTCAAGATCTTCTGAAGAAAGGGTCTATGAAGTTGTGCTGAAGCAAGCGGCTCTTGTCAGGGAACCCAAAAGGGATATACAGAGAGCTTTGGATTGGGAAAAAACCATCCAAAATGAGGGCATCACTGATGGGAATCTCTTGTCTGAGGCTTATGCTCGCTGTGGTGTGGTCTGTGCTGAATATGCCAAAACATTTTACTTGGGTAAACTTTCCTCCTTCCTACTCTTTTCATTTCTGGGTTGAATGCTTTTTGTTTCTGTCACCCTGTTTTCAGAGTTCCATTACAATTTGTACTGCTGCCTTTCTTTGAGATATAGATAATAGATTGTTTGGTTGCCAAGAAAATGGAATTGGAATGTTTTCTACTCTTGTTATACCTTTCCCAATGGCTGGAGTTGGGTTAAAACCATTTGGCTTTTTCTCTTTTCCCCCTTTGTTATTACAGATTGTAGTAAAGTAAAAAAGAGGCATGCACTTTTTCTAACTCTGTAGTCTGCAAAAGATGGGAGGATTATTGCTCCATTTTGATCTTAGCAAAGCATCTCAACTTACAAATAATTGTTTGATTGAGTCTCTTTCTTGCAATTCTCAGGGACACAACTTATGACACCAGAGCGAAGAAGAGCTGTGTGGGCGATTTACGGTATCAGTCATCCTCTTCCTCCAGCATGTTATCTTTATGTCTGCTGCAATTTTTGTTCATTTTTGTAGACCAAGTTGCTTGTTGGACATGGCAATGGACTTACACTAGTTGTAGCTATGCTTTCCTATAAGACATGTAGAATCACAAGTTGTCTTTTAACTTTTTGGTTAAATTATAAGTTTGGGCTTTGTAATCCAAGATTTGTATCTAGGTCCTTGAATAAGTGTTCAATAACTCCCTAATTCTTTAGTGGTATGTCCTACTCCTAAAGGTTCTTGAACTTTAAAAAGTTTATAATAGATCCATAGATTTTCATTTTCGTATCTAATGGATCTCTAAACTTTTTTCGTTTTGTCCAAAATCCCTAACTTACTAGACATTTTCTGAAGTTTTAAAACGTATTGAATACAAATTTGAAAGTTTATGGACTTATTACAAACGTTTTAAAGTTGAAGAACCTATTAGACACAAGTTGAAATTTAGGAACCTATTAGACAACTTTTCAAATAAAGGCTCCTATGAGACACAATCCAAAAGCTTAGAGACCAAACTTGTAATTTATCCTAACTATTATATTGTTTCTTTAAGATTTGTAGTTAAGTTGGGTATTAATATAAATGACAGTTAATTGAACACAATTCTTAATCACTACTCTTTTTATTTCACAATTAGAGTGCCAAAGACCCTTGATCTCCATTAACTTTAGAGAGACTTTGGAAGACAATAAAAGTTGTAAGTCATTAAGTTATCAACTGGAAAATTTGAACCCAAGGCTTTCAACGGTATCTCAGCACATCTTAAGCTCTTACTTAACCTCAGGGATAATTCTTAATCACTACATTTGCAGTCCTGATACTTTTTATATGTCATTCAATAAAAATATACCATCCCTGCACTTACTATGCTATCCTTTTTGTTCATACTACTGCCATAGTAGCAGTTTGCCTCGCAGTTCATAGCATTCCTTTTGATGTTATTTGAAGTTTTGAACATTCAAGAGTTCAACTCTTTGTAATGCAGTGTGGTGCAGAAGGACCGATGAGCTCGTGGATGGACCTAATGCTTCACACATTACCCCTAAAGCTCTTGAGCGATGGGAAAAACGACTAACTGATCTATTTGAGGGTCGACCGTATGATATGTATGATGCTGCTCTTTCCGATACTGTCTCAAAATACCCTGTTGACATTCAGGTAAACTTGACTTGGGGTCTGTTTAAAATGATTTTCACGATATTTATGTTTCTCTTCACTCCCTTTGTGATATGAGAACTTTAGGCTGCCATGACTAACATCTTGTGAAACCTAACAAAAAGCCAGATCCCAGTGAAGAAATGAACTTTTTTGATAGTACAAGAACAGAGAGGAGCTTACACAAATTGGAGATGTTATTGCCTGCTCTTTATCATTAAAATTTGATCATATAAGTTAATGAGATTTAGCCCTTTTTTGCTCTAATTTGAATTGGCAGTGAATGAATTTGTTCGGTCTAATCAAAAGCACACGAATTAAAACGAGCAACAATGATTTAACTACTCTCGTCTTCGAGTAAAGGAGGTCCATTTGTGTATGTTTTGACTTTTGATTCACTTGGCTTGAAATTATACGTTATGTTTTTGACAGCCCTTCAAGGACATGATCGAAGGAATGAGGTTGGACCTGCGAAAATCGAGATATGACAACTTTGACGAGCTTTACCTTTATTGCTATTATGTTGCGGGGACTGTGGGGCTCATGAGTGTTCCTGTCATGGGATTGGCACCTGAGTCGAAAGCTTCAGTAGAGAGCGTCTACAATGCAGCATTGGCTCTCGGACTCGCCAATCAACTCACAAACATTCTCAGAGACGTTGGAGAAGAGTAAGCTAATTTCCTCCACCATCTTTATATATCAACTATATTGCTTTCTAAACCATAGGGTTGCAAATTAGTTTCATAACAACCTTAAGATTTAGTTGTTAAAAACGAAACAAACGCAAAACCTTTTCGAAGTTTACGATAGTAACCTACATTTAGTTGTTCATTCATATCTTCCTTTTGGACAGTGCTAGGAGGGGAAGAGTGTATCTCCCACAAGACGAGTTGGCACAAGCAGGGCTATGCGACGACGACATATTCCGAGGGAAAGTGACGGACAAGTGGCGGTTTTTCATGAAAGGACAGATAAAAAGAGCAAGAAGGTTCTTTGATGAGGCTGAGAAGGGCGTTGCAGAACTGAGTGCAGCCAGTAGATGGCCAGTGTGGGCATCCCTAATGCTTTATAAGCAAATATTGGATTCCATTGAAGCAAATGACTATGACAACTTCACCAAAAGGGCATATGTAGGCAAAGCAAAGAAACTGCTATCACTTCCCATAGCCTTTGGGAGAGCTATGGTGGGCCCTTCAAGCTTCAAAGATTTGGTAACAAGA

mRNA sequence

AGAGAAGAGAAGCAGCAAGACCCAATAAAATATTGGGGGGGGTTTTGTGGATAGTTGTGAAGAAGATGTCTGGTGTCAATGCCAACTCTCTGCTGAGCCCCAAGCCAAGAATCAGAATCAGCAGCAACCCATTTGGGTCTAAAAGATTGAGTTTCTTTTCTGATGGGGTTTTGGCTTCCTCTGCTGCTGTGGTGAATCCTTCAAGATCTTCTGAAGAAAGGGTCTATGAAGTTGTGCTGAAGCAAGCGGCTCTTGTCAGGGAACCCAAAAGGGATATACAGAGAGCTTTGGATTGGGAAAAAACCATCCAAAATGAGGGCATCACTGATGGGAATCTCTTGTCTGAGGCTTATGCTCGCTGTGGTGTGGTCTGTGCTGAATATGCCAAAACATTTTACTTGGGGACACAACTTATGACACCAGAGCGAAGAAGAGCTGTGTGGGCGATTTACGGTATCAGTCATCCTCTTCCTCCAGCATGTTATCTTTATAGTTCAACTCTTTGTAATGCAGTGTGGTGCAGAAGGACCGATGAGCTCGTGGATGGACCTAATGCTTCACACATTACCCCTAAAGCTCTTGAGCGATGGGAAAAACGACTAACTGATCTATTTGAGGGTCGACCGTATGATATGTATGATGCTGCTCTTTCCGATACTGTCTCAAAATACCCTGTTGACATTCAGTACAAGAACAGAGAGGAGCTTACACAAATTGGAGATCCCTTCAAGGACATGATCGAAGGAATGAGGTTGGACCTGCGAAAATCGAGATATGACAACTTTGACGAGCTTTACCTTTATTGCTATTATGTTGCGGGGACTGTGGGGCTCATGAGTGTTCCTGTCATGGGATTGGCACCTGAGTCGAAAGCTTCAGTAGAGAGCGTCTACAATGCAGCATTGGCTCTCGGACTCGCCAATCAACTCACAAACATTCTCAGAGACGTTGGAGAAGATGCTAGGAGGGGAAGAGTGTATCTCCCACAAGACGAGTTGGCACAAGCAGGGCTATGCGACGACGACATATTCCGAGGGAAAGTGACGGACAAGTGGCGGTTTTTCATGAAAGGACAGATAAAAAGAGCAAGAAGGTTCTTTGATGAGGCTGAGAAGGGCGTTGCAGAACTGAGTGCAGCCAGTAGATGGCCAGTGTGGGCATCCCTAATGCTTTATAAGCAAATATTGGATTCCATTGAAGCAAATGACTATGACAACTTCACCAAAAGGGCATATGTAGGCAAAGCAAAGAAACTGCTATCACTTCCCATAGCCTTTGGGAGAGCTATGGTGGGCCCTTCAAGCTTCAAAGATTTGGTAACAAGA

Coding sequence (CDS)

ATGTCTGGTGTCAATGCCAACTCTCTGCTGAGCCCCAAGCCAAGAATCAGAATCAGCAGCAACCCATTTGGGTCTAAAAGATTGAGTTTCTTTTCTGATGGGGTTTTGGCTTCCTCTGCTGCTGTGGTGAATCCTTCAAGATCTTCTGAAGAAAGGGTCTATGAAGTTGTGCTGAAGCAAGCGGCTCTTGTCAGGGAACCCAAAAGGGATATACAGAGAGCTTTGGATTGGGAAAAAACCATCCAAAATGAGGGCATCACTGATGGGAATCTCTTGTCTGAGGCTTATGCTCGCTGTGGTGTGGTCTGTGCTGAATATGCCAAAACATTTTACTTGGGGACACAACTTATGACACCAGAGCGAAGAAGAGCTGTGTGGGCGATTTACGGTATCAGTCATCCTCTTCCTCCAGCATGTTATCTTTATAGTTCAACTCTTTGTAATGCAGTGTGGTGCAGAAGGACCGATGAGCTCGTGGATGGACCTAATGCTTCACACATTACCCCTAAAGCTCTTGAGCGATGGGAAAAACGACTAACTGATCTATTTGAGGGTCGACCGTATGATATGTATGATGCTGCTCTTTCCGATACTGTCTCAAAATACCCTGTTGACATTCAGTACAAGAACAGAGAGGAGCTTACACAAATTGGAGATCCCTTCAAGGACATGATCGAAGGAATGAGGTTGGACCTGCGAAAATCGAGATATGACAACTTTGACGAGCTTTACCTTTATTGCTATTATGTTGCGGGGACTGTGGGGCTCATGAGTGTTCCTGTCATGGGATTGGCACCTGAGTCGAAAGCTTCAGTAGAGAGCGTCTACAATGCAGCATTGGCTCTCGGACTCGCCAATCAACTCACAAACATTCTCAGAGACGTTGGAGAAGATGCTAGGAGGGGAAGAGTGTATCTCCCACAAGACGAGTTGGCACAAGCAGGGCTATGCGACGACGACATATTCCGAGGGAAAGTGACGGACAAGTGGCGGTTTTTCATGAAAGGACAGATAAAAAGAGCAAGAAGGTTCTTTGATGAGGCTGAGAAGGGCGTTGCAGAACTGAGTGCAGCCAGTAGATGGCCAGTGTGGGCATCCCTAATGCTTTATAAGCAAATATTGGATTCCATTGAAGCAAATGACTATGACAACTTCACCAAAAGGGCATATGTAGGCAAAGCAAAGAAACTGCTATCACTTCCCATAGCCTTTGGGAGAGCTATGGTGGGCCCTTCAAGCTTCAAAGATTTGGTAACAAGA

Protein sequence

MSGVNANSLLSPKPRIRISSNPFGSKRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQAALVREPKRDIQRALDWEKTIQNEGITDGNLLSEAYARCGVVCAEYAKTFYLGTQLMTPERRRAVWAIYGISHPLPPACYLYSSTLCNAVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQYKNREELTQIGDPFKDMIEGMRLDLRKSRYDNFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSSFKDLVTR

Homology

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BLAST of Lsi07G008190 vs. Swiss-Prot
Match: PSY_DAUCA (Phytoene synthase, chloroplastic OS=Daucus carota GN=PSY PE=2 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 5.3e-154
Identity = 284/401 (70.82%), Postives = 318/401 (79.30%), Query Frame = 1


Query: 25  SKRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQAALVREPKRDIQR-ALDWEKT--- 84
           S R+   S GV   SA   NP R+SEERVYEVVLKQAALVRE KR  +   LD ++T   
Sbjct: 33  SCRVMKLSTGV---SAVAANPVRTSEERVYEVVLKQAALVREEKRSSRGLCLDTKRTGSK 92

Query: 85  ----IQNE--GITDGNLLSEAYARCGVVCAEYAKTFYLGTQLMTPERRRAVWAIYGISHP 144
                +N+  G+   NLL+EAY RCG VCAEYAKTFYLGT LMTPERRRAVWAIY     
Sbjct: 93  SFDKSENDDAGMKSWNLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRRAVWAIY----- 152

Query: 145 LPPACYLYSSTLCNAVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAA 204
                          VWCRRTDELVDGPNASHITPKAL+RWEKRL DLF+G+PYDMYDAA
Sbjct: 153 ---------------VWCRRTDELVDGPNASHITPKALDRWEKRLNDLFDGQPYDMYDAA 212

Query: 205 LSDTVSKYPVDIQYKNREELTQIGDPFKDMIEGMRLDLRKSRYDNFDELYLYCYYVAGTV 264
           L+DTVS YPVDIQ            PFKDMI+GMR+DL+KSRY  FDELYLYCYYVAGTV
Sbjct: 213 LADTVSTYPVDIQ------------PFKDMIDGMRMDLKKSRYQTFDELYLYCYYVAGTV 272

Query: 265 GLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQA 324
           GLMSVPVMG+APESKA+ ESVY+AALALG+ANQLTNILRDVGEDARRGR+YLPQ+EL  A
Sbjct: 273 GLMSVPVMGIAPESKATTESVYSAALALGIANQLTNILRDVGEDARRGRIYLPQEELKLA 332

Query: 325 GLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQIL 384
           G+  + IF+GKVTDKWR FMKGQIKRAR FFDEAEKGVAELS+ASRWPVWASL+LYKQIL
Sbjct: 333 GITPEYIFKGKVTDKWRSFMKGQIKRARMFFDEAEKGVAELSSASRWPVWASLLLYKQIL 392

Query: 385 DSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSSFK 416
           D+IEANDYDNFTKRAYVGKAKKL+SLP+A+ RA+  PS+ +
Sbjct: 393 DAIEANDYDNFTKRAYVGKAKKLVSLPLAYSRALFAPSTVR 398

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BLAST of Lsi07G008190 vs. Swiss-Prot
Match: PSY_ARATH (Phytoene synthase, chloroplastic OS=Arabidopsis thaliana GN=PSY1 PE=2 SV=2)

HSP 1 Score: 512.7 bits (1319), Expect = 3.8e-144
Identity = 263/391 (67.26%), Postives = 305/391 (78.01%), Query Frame = 1


Query: 25  SKRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQAALVREPKRDIQRALDWEKTIQNE 84
           S+R+   S  ++AS +  +  + SSEE+VY VVLKQAALV +  R     LD +K    +
Sbjct: 63  SRRIGVVSSSLVASPSGEI--ALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKKP--QD 122

Query: 85  GITDGNL--LSEAYARCGVVCAEYAKTFYLGTQLMTPERRRAVWAIYGISHPLPPACYLY 144
            +  G+L  L EAY RCG VCAEYAKTFYLGT LMTPERR+A+WAIY             
Sbjct: 123 VVLPGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIY------------- 182

Query: 145 SSTLCNAVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVSKY 204
                  VWCRRTDELVDGPNASHITP AL+RWE RL DLF GRP+DM DAAL+DTV++Y
Sbjct: 183 -------VWCRRTDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARY 242

Query: 205 PVDIQYKNREELTQIGDPFKDMIEGMRLDLRKSRYDNFDELYLYCYYVAGTVGLMSVPVM 264
           PVDIQ            PF+DMIEGMR+DL+KSRY NFD+LYLYCYYVAGTVGLMSVPVM
Sbjct: 243 PVDIQ------------PFRDMIEGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVM 302

Query: 265 GLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIF 324
           G+ P+SKA+ ESVYNAALALG+ANQLTNILRDVGEDARRGRVYLPQDELAQAGL D+DIF
Sbjct: 303 GIDPKSKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIF 362

Query: 325 RGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDY 384
            GKVTDKWR FMK Q+KRAR FFDEAEKGV ELSAASRWPVWASL+LY++ILD IEANDY
Sbjct: 363 AGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRWPVWASLLLYRRILDEIEANDY 417

Query: 385 DNFTKRAYVGKAKKLLSLPIAFGRAMVGPSS 414
           +NFTKRAYVGK KK+ +LP+A+ ++++  SS
Sbjct: 423 NNFTKRAYVGKVKKIAALPLAYAKSVLKTSS 417

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BLAST of Lsi07G008190 vs. Swiss-Prot
Match: PSY_CUCME (Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 5.0e-144
Identity = 266/386 (68.91%), Postives = 305/386 (79.02%), Query Frame = 1


Query: 34  GVLASSAAVVNPSR----SSEERVYEVVLKQAALVREPKRDIQRA--LDWEKTIQNEGIT 93
           G +  ++ V NP+     S+E++VY VV+KQAALV   KR ++ A  LD +  I   G  
Sbjct: 74  GSVIVASMVANPAGEIAVSAEQKVYNVVMKQAALV---KRQLRTAGELDVKPDIVLPGTL 133

Query: 94  DGNLLSEAYARCGVVCAEYAKTFYLGTQLMTPERRRAVWAIYGISHPLPPACYLYSSTLC 153
             +LL+EAY RCG VCAEYAKTFYLGT LMTPER++A+WAIY                  
Sbjct: 134 --SLLNEAYDRCGEVCAEYAKTFYLGTMLMTPERQKAIWAIY------------------ 193

Query: 154 NAVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQ 213
             VWCRRTDELVDGPNASHITP AL+RWE RL +LF+GRP+DM DAAL+DTV+K+PVDIQ
Sbjct: 194 --VWCRRTDELVDGPNASHITPTALDRWEARLEELFQGRPFDMLDAALADTVTKFPVDIQ 253

Query: 214 YKNREELTQIGDPFKDMIEGMRLDLRKSRYDNFDELYLYCYYVAGTVGLMSVPVMGLAPE 273
                       PFKDMIEGMR+DLRKSRY NFDELYLYCYYVAGTVGLMSVPVMG+APE
Sbjct: 254 ------------PFKDMIEGMRMDLRKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPE 313

Query: 274 SKASVESVYNAALALGLANQLT-NILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKV 333
           S+AS ESVYNAALALG+ANQ   NILRDVGEDARRGR+YLPQDELAQAGL D+DIF G+V
Sbjct: 314 SQASTESVYNAALALGIANQAPPNILRDVGEDARRGRIYLPQDELAQAGLSDEDIFAGRV 373

Query: 334 TDKWRFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFT 393
           TDKWR FMK QIKRAR FFDEAEKGV EL+ ASRWPVWASL+LY+QILD IEANDYDNFT
Sbjct: 374 TDKWRNFMKNQIKRARMFFDEAEKGVLELNKASRWPVWASLLLYRQILDEIEANDYDNFT 422

Query: 394 KRAYVGKAKKLLSLPIAFGRAMVGPS 413
           KRAYV KAKK+L+LP+A+GRA++GPS
Sbjct: 434 KRAYVSKAKKILALPMAYGRALLGPS 422

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BLAST of Lsi07G008190 vs. Swiss-Prot
Match: PSY_NARPS (Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 1.9e-143
Identity = 258/384 (67.19%), Postives = 299/384 (77.86%), Query Frame = 1


Query: 36  LASSAAVVNPSR----SSEERVYEVVLKQAALVREPKRDIQRALDWEKTIQNEGITDGNL 95
           L  S+ V NP+     SSE++VY+VVLKQAALV++  +  +++ D +  I   G     L
Sbjct: 67  LIRSSLVANPAGEATISSEQKVYDVVLKQAALVKDQTKSSRKSTDVKPDIVLPGTV--YL 126

Query: 96  LSEAYARCGVVCAEYAKTFYLGTQLMTPERRRAVWAIYGISHPLPPACYLYSSTLCNAVW 155
           L +AY RCG VCAEYAKTFYLGT LMTPERRRA+WAIY                    VW
Sbjct: 127 LKDAYDRCGEVCAEYAKTFYLGTLLMTPERRRAIWAIY--------------------VW 186

Query: 156 CRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQYKNR 215
           CRRTDELVDG NASHITP AL+RWE RL DLF GRPYDM+DAALSDTVS++PVDIQ    
Sbjct: 187 CRRTDELVDGHNASHITPSALDRWEARLEDLFAGRPYDMFDAALSDTVSRFPVDIQ---- 246

Query: 216 EELTQIGDPFKDMIEGMRLDLRKSRYDNFDELYLYCYYVAGTVGLMSVPVMGLAPESKAS 275
                   PF DM+EGMR+DL+KSRY NFDELYLYCYYVAGTVGLMSVPVMG+APES A 
Sbjct: 247 --------PFMDMVEGMRMDLKKSRYKNFDELYLYCYYVAGTVGLMSVPVMGIAPESLAE 306

Query: 276 VESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWR 335
            ESVYNAALALG+ANQLTNILRDVGEDARRGR+YLPQDELA+AGL D+D+F GKVTDKWR
Sbjct: 307 AESVYNAALALGIANQLTNILRDVGEDARRGRIYLPQDELAEAGLSDEDVFTGKVTDKWR 366

Query: 336 FFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYV 395
            FMK QIKRAR FF++AEKGV ELS ASRWPVWASL+LY+QILD IEANDY+NFTKRAYV
Sbjct: 367 SFMKRQIKRARTFFEQAEKGVTELSQASRWPVWASLLLYRQILDEIEANDYNNFTKRAYV 416

Query: 396 GKAKKLLSLPIAFGRAMVGPSSFK 416
            K K+L +LP+A+G++++ P S +
Sbjct: 427 SKVKRLAALPLAYGKSLLIPLSLR 416

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BLAST of Lsi07G008190 vs. Swiss-Prot
Match: PSY_CAPAN (Bifunctional 15-cis-phytoene synthase, chromoplastic OS=Capsicum annuum GN=PSY1 PE=1 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 7.2e-143
Identity = 263/375 (70.13%), Postives = 294/375 (78.40%), Query Frame = 1


Query: 39  SAAVVNPS----RSSEERVYEVVLKQAALVREPKRDIQRALDWEKTIQNEGITDGNLLSE 98
           SA V  P+     SSE  VY+VVL+QAALV+   R     LD +K I   G     LLSE
Sbjct: 75  SAIVATPAGEMTMSSERMVYDVVLRQAALVKRQLRSTDE-LDVKKDIPIPGTL--GLLSE 134

Query: 99  AYARCGVVCAEYAKTFYLGTQLMTPERRRAVWAIYGISHPLPPACYLYSSTLCNAVWCRR 158
           AY RC  VCAEYAKTFYLGT LMTPERR+A+WAIY                    VWCRR
Sbjct: 135 AYDRCSEVCAEYAKTFYLGTMLMTPERRKAIWAIY--------------------VWCRR 194

Query: 159 TDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQYKNREEL 218
           TDELVDGPNASHITP AL+RWE RL D+F GRP+DM DAALSDTVSK+PVDIQ       
Sbjct: 195 TDELVDGPNASHITPAALDRWEDRLEDVFSGRPFDMLDAALSDTVSKFPVDIQ------- 254

Query: 219 TQIGDPFKDMIEGMRLDLRKSRYDNFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVES 278
                PF+DMIEGMR+DLRKSRY NFDELYLYCYYVAGTVGLMSVP+MG+APESKA+ ES
Sbjct: 255 -----PFRDMIEGMRMDLRKSRYRNFDELYLYCYYVAGTVGLMSVPIMGIAPESKATTES 314

Query: 279 VYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFM 338
           VYNAALALG+ANQLTNILRDVGEDARRGRVYLPQDELAQAGL D+DIF G+VTDKWR FM
Sbjct: 315 VYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGRVTDKWRIFM 374

Query: 339 KGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKA 398
           K QI+RAR+FFDEAEKGV ELSAASRWPV ASL+LY++ILD IEANDY+NFTKRAYV K 
Sbjct: 375 KKQIQRARKFFDEAEKGVTELSAASRWPVLASLLLYRRILDEIEANDYNNFTKRAYVSKP 414

Query: 399 KKLLSLPIAFGRAMV 410
           KKL++LPIA+ +++V
Sbjct: 435 KKLIALPIAYAKSLV 414

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BLAST of Lsi07G008190 vs. TrEMBL
Match: A0A0A0KVC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G063980 PE=4 SV=1)

HSP 1 Score: 747.7 bits (1929), Expect = 7.9e-213
Identity = 380/420 (90.48%), Postives = 384/420 (91.43%), Query Frame = 1


Query: 1   MSGVNANSLLSPKPRIRISSNPFGSKRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQ 60
           MSGVNANSLL PKPRIRISS+PFGSKRLSFFSDGVLASSAAV NPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGVLASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPKRDIQRALDWEKTIQNEGITDGNLLSEAYARCGVVCAEYAKTFYLGTQLMTPE 120
           AALVREPKRD+QRALDWEKTIQNEGITDGNLLSEAYARCG VCAEYAKTFYLGTQLMTPE
Sbjct: 61  AALVREPKRDVQRALDWEKTIQNEGITDGNLLSEAYARCGEVCAEYAKTFYLGTQLMTPE 120

Query: 121 RRRAVWAIYGISHPLPPACYLYSSTLCNAVWCRRTDELVDGPNASHITPKALERWEKRLT 180
           RRRAVWAIY                    VWCRRTDELVDGPNASHITPKALERWEKRLT
Sbjct: 121 RRRAVWAIY--------------------VWCRRTDELVDGPNASHITPKALERWEKRLT 180

Query: 181 DLFEGRPYDMYDAALSDTVSKYPVDIQYKNREELTQIGDPFKDMIEGMRLDLRKSRYDNF 240
           DLFEGRPYDMYDAALSDTVSKYPVDIQ            PFKDMIEGMRLDLRKSRY+NF
Sbjct: 181 DLFEGRPYDMYDAALSDTVSKYPVDIQ------------PFKDMIEGMRLDLRKSRYENF 240

Query: 241 DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDAR 300
           DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDAR
Sbjct: 241 DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDAR 300

Query: 301 RGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASR 360
           RGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASR
Sbjct: 301 RGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASR 360

Query: 361 WPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSSFKDLVTR 420
           WPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPS+ KDLVTR
Sbjct: 361 WPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSNLKDLVTR 388

[Close]

BLAST of Lsi07G008190 vs. TrEMBL
Match: T1RK41_CUCME (Phytoene synthase 3 OS=Cucumis melo GN=PSY3 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 2.1e-210
Identity = 375/420 (89.29%), Postives = 381/420 (90.71%), Query Frame = 1


Query: 1   MSGVNANSLLSPKPRIRISSNPFGSKRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQ 60
           MSGVNANSLL PKPRIRISS+PFGSKRLSFFSDG LASSAAV NPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGALASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPKRDIQRALDWEKTIQNEGITDGNLLSEAYARCGVVCAEYAKTFYLGTQLMTPE 120
           AALVREPKRD+QRALDWEKTIQNEGI DGNLLSEAYARCG VCAEYAKTFYLGTQLMTPE
Sbjct: 61  AALVREPKRDVQRALDWEKTIQNEGINDGNLLSEAYARCGEVCAEYAKTFYLGTQLMTPE 120

Query: 121 RRRAVWAIYGISHPLPPACYLYSSTLCNAVWCRRTDELVDGPNASHITPKALERWEKRLT 180
           RR+AVWAIY                    VWCRRTDELVDGPNASHITPKALERWEKRLT
Sbjct: 121 RRKAVWAIY--------------------VWCRRTDELVDGPNASHITPKALERWEKRLT 180

Query: 181 DLFEGRPYDMYDAALSDTVSKYPVDIQYKNREELTQIGDPFKDMIEGMRLDLRKSRYDNF 240
           DLFEGRPYDMYDAALSDTVSKYPVDIQ            PFKDMIEGMRLDLRKSRY++F
Sbjct: 181 DLFEGRPYDMYDAALSDTVSKYPVDIQ------------PFKDMIEGMRLDLRKSRYESF 240

Query: 241 DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDAR 300
           DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDAR
Sbjct: 241 DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDAR 300

Query: 301 RGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASR 360
           RGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASR
Sbjct: 301 RGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASR 360

Query: 361 WPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSSFKDLVTR 420
           WPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAM GPS+ KDLVTR
Sbjct: 361 WPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMAGPSNLKDLVTR 388

[Close]

BLAST of Lsi07G008190 vs. TrEMBL
Match: U3L2Q6_CUCPE (Phytoene synthase OS=Cucurbita pepo GN=PSYC PE=2 SV=1)

HSP 1 Score: 674.1 bits (1738), Expect = 1.1e-190
Identity = 350/421 (83.14%), Postives = 361/421 (85.75%), Query Frame = 1


Query: 1   MSGVNANSLLSPKPRIRISSNPF-----GSKRLSFFSDGVLASSAAVVNPSRSSEERVYE 60
           MSGVNANSLLSP PRI  SS+       G KRLS FS GVLASSAAV NPSRSSEERVYE
Sbjct: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRE-PKRDIQRALDWEKTIQNEGITDGNLLSEAYARCGVVCAEYAKTFYLGT 120
           VVLKQAALVRE PKRD + ALDW+KTIQNEGI+DGNLL EAY+RCG VCAEYAKTFYLGT
Sbjct: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120

Query: 121 QLMTPERRRAVWAIYGISHPLPPACYLYSSTLCNAVWCRRTDELVDGPNASHITPKALER 180
           QLMTPERRRAVWAIY                    VWCRRTDELVDGPNASHITPKALER
Sbjct: 121 QLMTPERRRAVWAIY--------------------VWCRRTDELVDGPNASHITPKALER 180

Query: 181 WEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQYKNREELTQIGDPFKDMIEGMRLDLRK 240
           WEKRLTDLFEGR YDMYDAALSDTVSKYPVDIQ            PFKDMIEGMRLDLRK
Sbjct: 181 WEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQ------------PFKDMIEGMRLDLRK 240

Query: 241 SRYDNFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRD 300
           SRY+NFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRD
Sbjct: 241 SRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRD 300

Query: 301 VGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAE 360
           VGEDARRGRVYLPQDELAQAGLCDDDIFRGKVT+KWR FMKGQIKRAR FFDEAEKG+ E
Sbjct: 301 VGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMFFDEAEKGIGE 360

Query: 361 LSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSSF 416
           L+ ASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFG+A+V P   
Sbjct: 361 LNGASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGKAVVAPQIS 389

[Close]

BLAST of Lsi07G008190 vs. TrEMBL
Match: U3L2P5_CUCPE (Phytoene synthase OS=Cucurbita pepo subsp. pepo GN=PSYC PE=2 SV=1)

HSP 1 Score: 671.8 bits (1732), Expect = 5.5e-190
Identity = 349/421 (82.90%), Postives = 360/421 (85.51%), Query Frame = 1


Query: 1   MSGVNANSLLSPKPRIRISSNPF-----GSKRLSFFSDGVLASSAAVVNPSRSSEERVYE 60
           MSGVNANSLLSP PRI  SS+       G KRLS FS GVLASSAAV NPSRSSEERVYE
Sbjct: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRE-PKRDIQRALDWEKTIQNEGITDGNLLSEAYARCGVVCAEYAKTFYLGT 120
           VVLKQAALVRE PKRD + ALDW KTIQNEGI+DGNLL EAY+RCG VCAEYAKTFYLGT
Sbjct: 61  VVLKQAALVRELPKRDGETALDWNKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120

Query: 121 QLMTPERRRAVWAIYGISHPLPPACYLYSSTLCNAVWCRRTDELVDGPNASHITPKALER 180
           QLMTPERRRAVWAIY                    VWCRRTDELVDGPNASHITPKALER
Sbjct: 121 QLMTPERRRAVWAIY--------------------VWCRRTDELVDGPNASHITPKALER 180

Query: 181 WEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQYKNREELTQIGDPFKDMIEGMRLDLRK 240
           WEKRLTDLFEGR YDMYDAALSDTVSKYPVDIQ            PFKDMIEGMRLDLRK
Sbjct: 181 WEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQ------------PFKDMIEGMRLDLRK 240

Query: 241 SRYDNFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRD 300
           SRY+NFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRD
Sbjct: 241 SRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRD 300

Query: 301 VGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAE 360
           VGEDARRG+VYLPQDELAQAGLCDDDIFRGKVT+KWR FMKGQIKRAR FFDEAEKG+ E
Sbjct: 301 VGEDARRGKVYLPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMFFDEAEKGIGE 360

Query: 361 LSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSSF 416
           L+ ASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFG+A+V P   
Sbjct: 361 LNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGKAVVAPQIS 389

[Close]

BLAST of Lsi07G008190 vs. TrEMBL
Match: C5I849_FRAAN (Phytoene synthase protein OS=Fragaria ananassa GN=psy PE=2 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 3.7e-170
Identity = 313/418 (74.88%), Postives = 347/418 (83.01%), Query Frame = 1


Query: 5   NANSLLSPKPRIRISSNPFGSKRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQAALV 64
           NA SLLS  PRI          RLSF S G++A S AV +P RSSEERVYEVVLKQAALV
Sbjct: 14  NATSLLSLMPRIGSPKRSKFCSRLSF-SPGIIAYSGAVAHPPRSSEERVYEVVLKQAALV 73

Query: 65  REPKRDIQRALDWEKTIQ-NEGITDGNLLSEAYARCGVVCAEYAKTFYLGTQLMTPERRR 124
           RE +R  ++ALD+++ I+ ++G+T+ +LL+EAY RCG VCAEYAKTFYLGT LMTPERRR
Sbjct: 74  REQRRPKEKALDFDQRIEGSDGMTNWDLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRR 133

Query: 125 AVWAIYGISHPLPPACYLYSSTLCNAVWCRRTDELVDGPNASHITPKALERWEKRLTDLF 184
           AVWAIY                    VWCRRTDELVDGPNAS+ITPKAL+RWEKRLTDLF
Sbjct: 134 AVWAIY--------------------VWCRRTDELVDGPNASYITPKALDRWEKRLTDLF 193

Query: 185 EGRPYDMYDAALSDTVSKYPVDIQYKNREELTQIGDPFKDMIEGMRLDLRKSRYDNFDEL 244
           EGRPYDMYDAALSDTV+KYPVDIQ            PFKDM+EGMRLDLRKSRY NFDEL
Sbjct: 194 EGRPYDMYDAALSDTVTKYPVDIQ------------PFKDMVEGMRLDLRKSRYQNFDEL 253

Query: 245 YLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGR 304
           YLYCYYVAGTVGLMSVPVMG+APESKAS ESVYNAALALG+ANQLTNILRDVGEDARRGR
Sbjct: 254 YLYCYYVAGTVGLMSVPVMGIAPESKASTESVYNAALALGIANQLTNILRDVGEDARRGR 313

Query: 305 VYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASRWPV 364
           +YLPQDELAQAGL DDDIFRGKVTDKW+ FMKGQIKRAR FFDEAEKGVAEL++ASRWPV
Sbjct: 314 IYLPQDELAQAGLSDDDIFRGKVTDKWQSFMKGQIKRARMFFDEAEKGVAELNSASRWPV 373

Query: 365 WASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSSF-KDLVTR 421
           WASL+LY+QILD+IEAN YDNFTKRAYVGKAKKL+SLPIA+GRA++GPS   + LV R
Sbjct: 374 WASLLLYRQILDAIEANGYDNFTKRAYVGKAKKLVSLPIAYGRAIIGPSKLTEQLVAR 398

[Close]

BLAST of Lsi07G008190 vs. TAIR10
Match: AT5G17230.3 (AT5G17230.3 PHYTOENE SYNTHASE)

HSP 1 Score: 517.7 bits (1332), Expect = 6.7e-147
Identity = 264/391 (67.52%), Postives = 309/391 (79.03%), Query Frame = 1


Query: 25  SKRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQAALVREPKRDIQRALDWEKTIQNE 84
           S+R+   S  ++AS +  +  + SSEE+VY VVLKQAALV +  R     LD +K    +
Sbjct: 63  SRRIGVVSSSLVASPSGEI--ALSSEEKVYNVVLKQAALVNKQLRSSSYDLDVKKP--QD 122

Query: 85  GITDGNL--LSEAYARCGVVCAEYAKTFYLGTQLMTPERRRAVWAIYGISHPLPPACYLY 144
            +  G+L  L EAY RCG VCAEYAKTFYLGT LMTPERR+A+WAIY +          Y
Sbjct: 123 VVLPGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVMLK-----VDFY 182

Query: 145 SSTLCNAVWCRRTDELVDGPNASHITPKALERWEKRLTDLFEGRPYDMYDAALSDTVSKY 204
             ++   VWCRRTDELVDGPNASHITP AL+RWE RL DLF GRP+DM DAAL+DTV++Y
Sbjct: 183 KQSIVALVWCRRTDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALADTVARY 242

Query: 205 PVDIQYKNREELTQIGDPFKDMIEGMRLDLRKSRYDNFDELYLYCYYVAGTVGLMSVPVM 264
           PVDIQ            PF+DMIEGMR+DL+KSRY NFD+LYLYCYYVAGTVGLMSVPVM
Sbjct: 243 PVDIQ------------PFRDMIEGMRMDLKKSRYQNFDDLYLYCYYVAGTVGLMSVPVM 302

Query: 265 GLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGRVYLPQDELAQAGLCDDDIF 324
           G+ P+SKA+ ESVYNAALALG+ANQLTNILRDVGEDARRGRVYLPQDELAQAGL D+DIF
Sbjct: 303 GIDPKSKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIF 362

Query: 325 RGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASRWPVWASLMLYKQILDSIEANDY 384
            GKVTDKWR FMK Q+KRAR FFDEAEKGV ELSAASRWPVWASL+LY++ILD IEANDY
Sbjct: 363 AGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELSAASRWPVWASLLLYRRILDEIEANDY 422

Query: 385 DNFTKRAYVGKAKKLLSLPIAFGRAMVGPSS 414
           +NFTKRAYVGK KK+ +LP+A+ ++++  SS
Sbjct: 423 NNFTKRAYVGKVKKIAALPLAYAKSVLKTSS 432

[Close]

BLAST of Lsi07G008190 vs. NCBI nr
Match: gi|449460028|ref|XP_004147748.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 747.7 bits (1929), Expect = 1.1e-212
Identity = 380/420 (90.48%), Postives = 384/420 (91.43%), Query Frame = 1


Query: 1   MSGVNANSLLSPKPRIRISSNPFGSKRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQ 60
           MSGVNANSLL PKPRIRISS+PFGSKRLSFFSDGVLASSAAV NPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGVLASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPKRDIQRALDWEKTIQNEGITDGNLLSEAYARCGVVCAEYAKTFYLGTQLMTPE 120
           AALVREPKRD+QRALDWEKTIQNEGITDGNLLSEAYARCG VCAEYAKTFYLGTQLMTPE
Sbjct: 61  AALVREPKRDVQRALDWEKTIQNEGITDGNLLSEAYARCGEVCAEYAKTFYLGTQLMTPE 120

Query: 121 RRRAVWAIYGISHPLPPACYLYSSTLCNAVWCRRTDELVDGPNASHITPKALERWEKRLT 180
           RRRAVWAIY                    VWCRRTDELVDGPNASHITPKALERWEKRLT
Sbjct: 121 RRRAVWAIY--------------------VWCRRTDELVDGPNASHITPKALERWEKRLT 180

Query: 181 DLFEGRPYDMYDAALSDTVSKYPVDIQYKNREELTQIGDPFKDMIEGMRLDLRKSRYDNF 240
           DLFEGRPYDMYDAALSDTVSKYPVDIQ            PFKDMIEGMRLDLRKSRY+NF
Sbjct: 181 DLFEGRPYDMYDAALSDTVSKYPVDIQ------------PFKDMIEGMRLDLRKSRYENF 240

Query: 241 DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDAR 300
           DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDAR
Sbjct: 241 DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDAR 300

Query: 301 RGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASR 360
           RGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASR
Sbjct: 301 RGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASR 360

Query: 361 WPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSSFKDLVTR 420
           WPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPS+ KDLVTR
Sbjct: 361 WPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSNLKDLVTR 388

[Close]

BLAST of Lsi07G008190 vs. NCBI nr
Match: gi|659101861|ref|XP_008451831.1| (PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis melo])

HSP 1 Score: 739.6 bits (1908), Expect = 3.1e-210
Identity = 375/420 (89.29%), Postives = 381/420 (90.71%), Query Frame = 1


Query: 1   MSGVNANSLLSPKPRIRISSNPFGSKRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQ 60
           MSGVNANSLL PKPRIRISS+PFGSKRLSFFSDG LASSAAV NPSRSSEERVYEVVLKQ
Sbjct: 1   MSGVNANSLLIPKPRIRISSSPFGSKRLSFFSDGALASSAAVANPSRSSEERVYEVVLKQ 60

Query: 61  AALVREPKRDIQRALDWEKTIQNEGITDGNLLSEAYARCGVVCAEYAKTFYLGTQLMTPE 120
           AALVREPKRD+QRALDWEKTIQNEGI DGNLLSEAYARCG VCAEYAKTFYLGTQLMTPE
Sbjct: 61  AALVREPKRDVQRALDWEKTIQNEGINDGNLLSEAYARCGEVCAEYAKTFYLGTQLMTPE 120

Query: 121 RRRAVWAIYGISHPLPPACYLYSSTLCNAVWCRRTDELVDGPNASHITPKALERWEKRLT 180
           RR+AVWAIY                    VWCRRTDELVDGPNASHITPKALERWEKRLT
Sbjct: 121 RRKAVWAIY--------------------VWCRRTDELVDGPNASHITPKALERWEKRLT 180

Query: 181 DLFEGRPYDMYDAALSDTVSKYPVDIQYKNREELTQIGDPFKDMIEGMRLDLRKSRYDNF 240
           DLFEGRPYDMYDAALSDTVSKYPVDIQ            PFKDMIEGMRLDLRKSRY++F
Sbjct: 181 DLFEGRPYDMYDAALSDTVSKYPVDIQ------------PFKDMIEGMRLDLRKSRYESF 240

Query: 241 DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDAR 300
           DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDAR
Sbjct: 241 DELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDAR 300

Query: 301 RGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASR 360
           RGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASR
Sbjct: 301 RGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASR 360

Query: 361 WPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSSFKDLVTR 420
           WPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAM GPS+ KDLVTR
Sbjct: 361 WPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMAGPSNLKDLVTR 388

[Close]

BLAST of Lsi07G008190 vs. NCBI nr
Match: gi|524852994|gb|AFV33363.1| (phytoene synthase [Cucurbita pepo])

HSP 1 Score: 674.1 bits (1738), Expect = 1.6e-190
Identity = 350/421 (83.14%), Postives = 361/421 (85.75%), Query Frame = 1


Query: 1   MSGVNANSLLSPKPRIRISSNPF-----GSKRLSFFSDGVLASSAAVVNPSRSSEERVYE 60
           MSGVNANSLLSP PRI  SS+       G KRLS FS GVLASSAAV NPSRSSEERVYE
Sbjct: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRE-PKRDIQRALDWEKTIQNEGITDGNLLSEAYARCGVVCAEYAKTFYLGT 120
           VVLKQAALVRE PKRD + ALDW+KTIQNEGI+DGNLL EAY+RCG VCAEYAKTFYLGT
Sbjct: 61  VVLKQAALVRELPKRDGETALDWDKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120

Query: 121 QLMTPERRRAVWAIYGISHPLPPACYLYSSTLCNAVWCRRTDELVDGPNASHITPKALER 180
           QLMTPERRRAVWAIY                    VWCRRTDELVDGPNASHITPKALER
Sbjct: 121 QLMTPERRRAVWAIY--------------------VWCRRTDELVDGPNASHITPKALER 180

Query: 181 WEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQYKNREELTQIGDPFKDMIEGMRLDLRK 240
           WEKRLTDLFEGR YDMYDAALSDTVSKYPVDIQ            PFKDMIEGMRLDLRK
Sbjct: 181 WEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQ------------PFKDMIEGMRLDLRK 240

Query: 241 SRYDNFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRD 300
           SRY+NFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRD
Sbjct: 241 SRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRD 300

Query: 301 VGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAE 360
           VGEDARRGRVYLPQDELAQAGLCDDDIFRGKVT+KWR FMKGQIKRAR FFDEAEKG+ E
Sbjct: 301 VGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMFFDEAEKGIGE 360

Query: 361 LSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSSF 416
           L+ ASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFG+A+V P   
Sbjct: 361 LNGASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGKAVVAPQIS 389

[Close]

BLAST of Lsi07G008190 vs. NCBI nr
Match: gi|524852996|gb|AFV33364.1| (phytoene synthase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 671.8 bits (1732), Expect = 7.9e-190
Identity = 349/421 (82.90%), Postives = 360/421 (85.51%), Query Frame = 1


Query: 1   MSGVNANSLLSPKPRIRISSNPF-----GSKRLSFFSDGVLASSAAVVNPSRSSEERVYE 60
           MSGVNANSLLSP PRI  SS+       G KRLS FS GVLASSAAV NPSRSSEERVYE
Sbjct: 1   MSGVNANSLLSPMPRISSSSSSSSSRSNGCKRLSLFSCGVLASSAAVANPSRSSEERVYE 60

Query: 61  VVLKQAALVRE-PKRDIQRALDWEKTIQNEGITDGNLLSEAYARCGVVCAEYAKTFYLGT 120
           VVLKQAALVRE PKRD + ALDW KTIQNEGI+DGNLL EAY+RCG VCAEYAKTFYLGT
Sbjct: 61  VVLKQAALVRELPKRDGETALDWNKTIQNEGISDGNLLDEAYSRCGEVCAEYAKTFYLGT 120

Query: 121 QLMTPERRRAVWAIYGISHPLPPACYLYSSTLCNAVWCRRTDELVDGPNASHITPKALER 180
           QLMTPERRRAVWAIY                    VWCRRTDELVDGPNASHITPKALER
Sbjct: 121 QLMTPERRRAVWAIY--------------------VWCRRTDELVDGPNASHITPKALER 180

Query: 181 WEKRLTDLFEGRPYDMYDAALSDTVSKYPVDIQYKNREELTQIGDPFKDMIEGMRLDLRK 240
           WEKRLTDLFEGR YDMYDAALSDTVSKYPVDIQ            PFKDMIEGMRLDLRK
Sbjct: 181 WEKRLTDLFEGRAYDMYDAALSDTVSKYPVDIQ------------PFKDMIEGMRLDLRK 240

Query: 241 SRYDNFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRD 300
           SRY+NFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRD
Sbjct: 241 SRYENFDELYLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRD 300

Query: 301 VGEDARRGRVYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAE 360
           VGEDARRG+VYLPQDELAQAGLCDDDIFRGKVT+KWR FMKGQIKRAR FFDEAEKG+ E
Sbjct: 301 VGEDARRGKVYLPQDELAQAGLCDDDIFRGKVTEKWRSFMKGQIKRARMFFDEAEKGIGE 360

Query: 361 LSAASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSSF 416
           L+ ASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFG+A+V P   
Sbjct: 361 LNEASRWPVWASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGKAVVAPQIS 389

[Close]

BLAST of Lsi07G008190 vs. NCBI nr
Match: gi|238836224|gb|ACR61392.1| (phytoene synthase protein [Fragaria x ananassa])

HSP 1 Score: 605.9 bits (1561), Expect = 5.3e-170
Identity = 313/418 (74.88%), Postives = 347/418 (83.01%), Query Frame = 1


Query: 5   NANSLLSPKPRIRISSNPFGSKRLSFFSDGVLASSAAVVNPSRSSEERVYEVVLKQAALV 64
           NA SLLS  PRI          RLSF S G++A S AV +P RSSEERVYEVVLKQAALV
Sbjct: 14  NATSLLSLMPRIGSPKRSKFCSRLSF-SPGIIAYSGAVAHPPRSSEERVYEVVLKQAALV 73

Query: 65  REPKRDIQRALDWEKTIQ-NEGITDGNLLSEAYARCGVVCAEYAKTFYLGTQLMTPERRR 124
           RE +R  ++ALD+++ I+ ++G+T+ +LL+EAY RCG VCAEYAKTFYLGT LMTPERRR
Sbjct: 74  REQRRPKEKALDFDQRIEGSDGMTNWDLLNEAYDRCGEVCAEYAKTFYLGTLLMTPERRR 133

Query: 125 AVWAIYGISHPLPPACYLYSSTLCNAVWCRRTDELVDGPNASHITPKALERWEKRLTDLF 184
           AVWAIY                    VWCRRTDELVDGPNAS+ITPKAL+RWEKRLTDLF
Sbjct: 134 AVWAIY--------------------VWCRRTDELVDGPNASYITPKALDRWEKRLTDLF 193

Query: 185 EGRPYDMYDAALSDTVSKYPVDIQYKNREELTQIGDPFKDMIEGMRLDLRKSRYDNFDEL 244
           EGRPYDMYDAALSDTV+KYPVDIQ            PFKDM+EGMRLDLRKSRY NFDEL
Sbjct: 194 EGRPYDMYDAALSDTVTKYPVDIQ------------PFKDMVEGMRLDLRKSRYQNFDEL 253

Query: 245 YLYCYYVAGTVGLMSVPVMGLAPESKASVESVYNAALALGLANQLTNILRDVGEDARRGR 304
           YLYCYYVAGTVGLMSVPVMG+APESKAS ESVYNAALALG+ANQLTNILRDVGEDARRGR
Sbjct: 254 YLYCYYVAGTVGLMSVPVMGIAPESKASTESVYNAALALGIANQLTNILRDVGEDARRGR 313

Query: 305 VYLPQDELAQAGLCDDDIFRGKVTDKWRFFMKGQIKRARRFFDEAEKGVAELSAASRWPV 364
           +YLPQDELAQAGL DDDIFRGKVTDKW+ FMKGQIKRAR FFDEAEKGVAEL++ASRWPV
Sbjct: 314 IYLPQDELAQAGLSDDDIFRGKVTDKWQSFMKGQIKRARMFFDEAEKGVAELNSASRWPV 373

Query: 365 WASLMLYKQILDSIEANDYDNFTKRAYVGKAKKLLSLPIAFGRAMVGPSSF-KDLVTR 421
           WASL+LY+QILD+IEAN YDNFTKRAYVGKAKKL+SLPIA+GRA++GPS   + LV R
Sbjct: 374 WASLLLYRQILDAIEANGYDNFTKRAYVGKAKKLVSLPIAYGRAIIGPSKLTEQLVAR 398

The following BLAST results are available for this feature:

BLAST of Lsi07G008190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PSY_DAUCA	5.3e-154	70.82	Phytoene synthase, chloroplastic OS=Daucus carota GN=PSY PE=2 SV=1	[more]
PSY_ARATH	3.8e-144	67.26	Phytoene synthase, chloroplastic OS=Arabidopsis thaliana GN=PSY1 PE=2 SV=2	[more]
PSY_CUCME	5.0e-144	68.91	Phytoene synthase, chloroplastic OS=Cucumis melo GN=PSY PE=2 SV=1	[more]
PSY_NARPS	1.9e-143	67.19	Phytoene synthase, chloroplastic OS=Narcissus pseudonarcissus GN=PSY PE=2 SV=1	[more]
PSY_CAPAN	7.2e-143	70.13	Bifunctional 15-cis-phytoene synthase, chromoplastic OS=Capsicum annuum GN=PSY1 ...	[more]

BLAST of Lsi07G008190 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVC2_CUCSA	7.9e-213	90.48	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G063980 PE=4 SV=1	[more]
T1RK41_CUCME	2.1e-210	89.29	Phytoene synthase 3 OS=Cucumis melo GN=PSY3 PE=4 SV=1	[more]
U3L2Q6_CUCPE	1.1e-190	83.14	Phytoene synthase OS=Cucurbita pepo GN=PSYC PE=2 SV=1	[more]
U3L2P5_CUCPE	5.5e-190	82.90	Phytoene synthase OS=Cucurbita pepo subsp. pepo GN=PSYC PE=2 SV=1	[more]
C5I849_FRAAN	3.7e-170	74.88	Phytoene synthase protein OS=Fragaria ananassa GN=psy PE=2 SV=1	[more]

BLAST of Lsi07G008190 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G17230.3	6.7e-147	67.52	PHYTOENE SYNTHASE	[more]

BLAST of Lsi07G008190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449460028\|ref\|XP_004147748.1\|	1.1e-212	90.48	PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis sativus]	[more]
gi\|659101861\|ref\|XP_008451831.1\|	3.1e-210	89.29	PREDICTED: phytoene synthase 2, chloroplastic-like [Cucumis melo]	[more]
gi\|524852994\|gb\|AFV33363.1\|	1.6e-190	83.14	phytoene synthase [Cucurbita pepo]	[more]
gi\|524852996\|gb\|AFV33364.1\|	7.9e-190	82.90	phytoene synthase [Cucurbita pepo subsp. pepo]	[more]
gi\|238836224\|gb\|ACR61392.1\|	5.3e-170	74.88	phytoene synthase protein [Fragaria x ananassa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups
GO:0016740	transferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0009058	biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR019845	Squalene/phytoene_synthase_CS
IPR008949	Isoprenoid_synthase_dom_sf
IPR002060	Squ/phyt_synthse

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016102	diterpenoid biosynthetic process
biological_process	GO:0006694	steroid biosynthetic process
biological_process	GO:0009058	biosynthetic process
cellular_component	GO:0009536	plastid
molecular_function	GO:0016767	geranylgeranyl-diphosphate geranylgeranyltransferase activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi07G008190.1	Lsi07G008190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002060	Squalene/phytoene synthase	PFAM	PF00494	SQS_PSY	coord: 150..393 score: 4.5
IPR008949	Isoprenoid synthase domain	GENE3D	G3DSA:1.10.600.10		coord: 92..409 score: 2.8E
IPR008949	Isoprenoid synthase domain	unknown	SSF48576	Terpenoid synthases	coord: 95..408 score: 1.33
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01044	SQUALEN_PHYTOEN_SYN_1	coord: 246..261 scor
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01045	SQUALEN_PHYTOEN_SYN_2	coord: 282..307 scor
None	No IPR available	PANTHER	PTHR31480	FAMILY NOT NAMED	coord: 220..420 score: 1.5E-262coord: 31..129 score: 1.5E-262coord: 150..203 score: 1.5E
None	No IPR available	PANTHER	PTHR31480:SF4	SUBFAMILY NOT NAMED	coord: 150..203 score: 1.5E-262coord: 31..129 score: 1.5E-262coord: 220..420 score: 1.5E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi07G008190	Silver-seed gourd	carlsiB043
Lsi07G008190	Silver-seed gourd	carlsiB596
Lsi07G008190	Cucumber (Chinese Long) v3	cuclsiB323
Lsi07G008190	Watermelon (97103) v2	lsiwmbB411
Lsi07G008190	Wax gourd	lsiwgoB544
Lsi07G008190	Cucumber (Gy14) v1	cgylsiB301
Lsi07G008190	Cucurbita maxima (Rimu)	cmalsiB325
Lsi07G008190	Cucurbita maxima (Rimu)	cmalsiB695
Lsi07G008190	Cucurbita moschata (Rifu)	cmolsiB314
Lsi07G008190	Cucurbita moschata (Rifu)	cmolsiB689
Lsi07G008190	Cucurbita pepo (Zucchini)	cpelsiB184
Lsi07G008190	Cucurbita pepo (Zucchini)	cpelsiB372
Lsi07G008190	Wild cucumber (PI 183967)	cpilsiB304
Lsi07G008190	Cucumber (Chinese Long) v2	culsiB304
Lsi07G008190	Melon (DHL92) v3.5.1	lsimeB455
Lsi07G008190	Watermelon (Charleston Gray)	lsiwcgB412
Lsi07G008190	Watermelon (97103) v1	lsiwmB440
Lsi07G008190	Cucumber (Gy14) v2	cgyblsiB278
Lsi07G008190	Melon (DHL92) v3.6.1	lsimedB472