Lsi07G006230 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGCAATGAAACGGCCTAAAACCTAGGCAAAGTCTTACTATTGACGCCACACGGACTATTCACATCCCTTTCAAAAAGGGTATAAAGTTTAAACCAACAAAAAGGATTAAAACCCAGCCCTCGCTGCATCAAAACCTCTCTTAATCCCTCCATCTTCTCTCGATCGCTCCTCCGATTCAAGGTTTGTTCGTCTTTCAACCCGTCTTGTTCTCTTCAAGAGTTTCTTGCCTTACGATTGTTGCAATCACGATTTTATGTTTTTTTTTTCCTGCTACAATGTAATTAGCAATTAGCAATTTCGTTTATAATCTCACTCTGTTACTCGATTTATCTCTTTTCTTTTTATTTGAAGTTCCTGATTAAACTGTCTGTTTCTGACTGTCATTCATGTTAAGAATCTAATTGTTCTCGTCGATGTTACAGATTTGTCACCGAAATTTATCGAACGCCTTACAAACAATTCAGCCCCTTTCGGCATTCAATTCCCCCCCGATCAATCTTTTCTGTTTCCAGTTCCCTCCTCAAGATCATGAATGACGGTGGCCCTAGATATGCTGGAAGAGGCCATCCGAATAACAGAGGACGATCTCCTCGCTCTGCCGATAATTTCATTTATCGTCCCCGTCATGTAATGTAACTTTCTTCAAGCTTCGCAATGTTTACAAATTTTACGCATATTGGCTATAGTCTTTAGTTTTTTCATTCTTCGTTTATTAATATGTGTTTATTCGTGTCTATAAAAAGATGGAGTTAACAGTTCACTGAGTCCGTTTCAGTTATTTATTTATTTATTTTTCTCTTCATGAAGAAGAATTGATGATATTCCTGACACAATTGGAGATTTCATGGATCTTGGGAATGACACGAGGACTTAACTTGTTTATGGAATTCTGAAACTTGTAGATGTTTAATTTTGTTTGCAAGTTTATGAAAATACAATGTATGATAGGAATAGGTTGTATCAGTTAGTAAGGGAGTCGAATTGAAGGTGCTGGAGTTTATATTTGTACTTTCATGCTTACTTCTAATCTTTTCACATTCTAACAAAAAGTGCAGGCTGGAGGTGAGGGGCCCTCTGTTGCTGGTTCTTCTAACACTGGTAGTGGAGCTTTCCGAGCGAGAAGTTCTCACCAGATGTCATCAAGGAATTTCAGGAAGCCTGTTGGACAGAAACAGGCCTCGAGTTCTGAACAGTGGCAGTGGCGGCCTTTAAATAGTGGGAAAGATGCATCTCCTTGTGCTGTTGATCTTCAGCTGGAACATAATTCAACTGATGATATGAGCAATACCTCTAAAAAATTATTGGGATCTATTGCATCAAATTCTGATAGCAATCAAATGAGCAATACCTCTGAGCAACTATTGGGATCTATTGCTTCAAATTCTGATAGCAATCAAATGAGCAATACCTCTGAACAACTATTGGGATCTGTTGCATCAAATTCTGATTGCATCGAACTCCCGCCCTCTTCTGCTGAAAATGTCTTTAAGAGTTTGCATTCTGCTGTAGAAAGAATTCAGATTCGGGAACCTACAGCGGTAGGGGGAAGTTGTAGTGATTCATTTCCTTATGATAATTGCAACAGATCAGATGCTGTTGGACAGGAACTCAAGGTTCAACTTACCTTGGAATCCTGTGTGAAAGATGAGAGTTCCACCATAAAACTAAGGGAAAGTAATAATGTTTCTGACTCTACGGACTCAAAAGACAAGAAGCCTTCAGTGAACCTCGATCCTTTTGATATATGCCCTCTAAAGTCTGGAGTTGTCATGCTGAATCCTTCTTTATTGGCTAAGAACAGAGAAAAGAGGAATGAGATGAAGCGTGCAATGGAGGGAAATAGTGGAATTGTGTTAAGATCAGGAATGGTTCATTTGAAGAGTGGCATTTCCCTTAGGGATCAGGTATACATTGATTTTTCTCTCTCACCTGCATAAATGATGCATATCAAAATTTTGTTATTGTAGAAACAGCCTCAGACATAACTGAATCAGTTCTTGAGTTAAAGATCTTTCCATGTATCTCTAGGAGGGAAAGCTCGCTCTCCAAGGATAGGAAAGCGCTGTATCATTTTATTTTTCTTGAACCAAGCTTTCATTGAGAAAAACGGAATATGGAAAAGAAAAATAAAAGAAAAAGCCTCACAAAACGAGTCCAAATGCTAAGCACAAATTGACTAAGATCTAGATGATAGTTACAAAAATCCTGAGGAAAGATGATTTATTATCAAGCAAGAAATATATCTACAGGATGAGTTGTAGCTTCCACTATGGTCTGTGTTTTCCTTTCATTCTAGGCTCACCATATATGTGTTGGATGGTTTTCTTTATGTTTGATTTGAACCACACTATTATTTTTAGCTTTGTTGAGGGGGTTTTCAAAACTCTGAATCTTCCTTGCTTTCCTTACTGTTGTTTTTCTTTCTCTGTTATGCTCGCTGCAGGTAAAGATAGTAAAAAGATGTCGGGATCTTGGTGTTGGACCTGGAGGATTTTACCAACCTGGTTACCGTGAAGGAGGAAAGCTACACTTGAAAATGATGTGCCTAGGTAAAAATTGGGATCCTGACAGTAGTACATATGGGGATGTTCGTCCATTTGATGATACAAAACCACCGAATCTACCCGATGAATTTCATCAACTGGTTGAAAAGGCAATCAAAGATTCTTATGCCATTATGGGGAAAGATTCAACAATAAAAAATCCTGAACGTGTACTTCCAGGGATGAAGCCAAACATCTGTATTGTAAACTTCTACTCACAAAATGGACGATTAGATCTTCATCAGGTCTGCAATAATGGCTCCTATGATCCACTTTTTGGATTGTCCAACATTTGCATAATTCTTCCATCATAATCTTTATTTCATTTTCTTCCCATTAGGATCGAGATGAAAGTCAAGAAAGTCTCGATAAAGGATTGCCTGTTGTCTCCTTCTCCATTGGTGACTCTGCAGAATTCCTATTTGGTGATCGGAGTGACGTTGATCAAGCAGAGAAAGTTACTTTGGAATCCGGAGATATCTTGATATTTGGTGGGAAATCAAGACATGTTTTCCATGGGGTGACTGCAATTCATCCAAACACTGCTCCAAAAGCACTTTTAGAATCAACAAATCTTCGTCCAGGTCGTTTGAATCTTACTTTCCGTCAGTACTGAAAGCTTTTTTTTTTTTCTCATCTAGGGAGATATCCATGAAACAACGCCCTTATATATAATACAGTTCCATGTTTCCCTCTAACAACGCCCTTATAATACAGTTCCATGTTTCCCTCTAGTGCCTTCGGGAAGTTGGTTTTGTTTTACTTAACACATTTCAAAAGTTTCGTCGTAATAGATTCTTGATGCTGTACAGAGGTAGATATTAGTTGTAATTTATTATCCGATGGGAAATTTTATGGCTTTGCAAGAACTTTCTCATATTGTGCAGTTGTAGTCTTTTGCATCACAGTGAAGAGTGGTTGTGAAGGAATTTTTGTTGGGAGTTCTGATCTCTGGAAGGAGTTTCTTCTCTTGTGTTAGTTACCATGGAATCACCCAATTGACTGCCATTTTG CGCAATGAAACGGCCTAAAACCTAGGCAAAGTCTTACTATTGACGCCACACGGACTATTCACATCCCTTTCAAAAAGGGTATAAAGTTTAAACCAACAAAAAGGATTAAAACCCAGCCCTCGCTGCATCAAAACCTCTCTTAATCCCTCCATCTTCTCTCGATCGCTCCTCCGATTCAAGATTTGTCACCGAAATTTATCGAACGCCTTACAAACAATTCAGCCCCTTTCGGCATTCAATTCCCCCCCGATCAATCTTTTCTGTTTCCAGTTCCCTCCTCAAGATCATGAATGACGGTGGCCCTAGATATGCTGGAAGAGGCCATCCGAATAACAGAGGACGATCTCCTCGCTCTGCCGATAATTTCATTTATCGTCCCCGTCATGCTGGAGGTGAGGGGCCCTCTGTTGCTGGTTCTTCTAACACTGGTAGTGGAGCTTTCCGAGCGAGAAGTTCTCACCAGATGTCATCAAGGAATTTCAGGAAGCCTGTTGGACAGAAACAGGCCTCGAGTTCTGAACAGTGGCAGTGGCGGCCTTTAAATAGTGGGAAAGATGCATCTCCTTGTGCTGTTGATCTTCAGCTGGAACATAATTCAACTGATGATATGAGCAATACCTCTAAAAAATTATTGGGATCTATTGCATCAAATTCTGATAGCAATCAAATGAGCAATACCTCTGAGCAACTATTGGGATCTATTGCTTCAAATTCTGATAGCAATCAAATGAGCAATACCTCTGAACAACTATTGGGATCTGTTGCATCAAATTCTGATTGCATCGAACTCCCGCCCTCTTCTGCTGAAAATGTCTTTAAGAGTTTGCATTCTGCTGTAGAAAGAATTCAGATTCGGGAACCTACAGCGGTAGGGGGAAGTTGTAGTGATTCATTTCCTTATGATAATTGCAACAGATCAGATGCTGTTGGACAGGAACTCAAGGTTCAACTTACCTTGGAATCCTGTGTGAAAGATGAGAGTTCCACCATAAAACTAAGGGAAAGTAATAATGTTTCTGACTCTACGGACTCAAAAGACAAGAAGCCTTCAGTGAACCTCGATCCTTTTGATATATGCCCTCTAAAGTCTGGAGTTGTCATGCTGAATCCTTCTTTATTGGCTAAGAACAGAGAAAAGAGGAATGAGATGAAGCGTGCAATGGAGGGAAATAGTGGAATTGTGTTAAGATCAGGAATGGTTCATTTGAAGAGTGGCATTTCCCTTAGGGATCAGGTAAAGATAGTAAAAAGATGTCGGGATCTTGGTGTTGGACCTGGAGGATTTTACCAACCTGGTTACCGTGAAGGAGGAAAGCTACACTTGAAAATGATGTGCCTAGGTAAAAATTGGGATCCTGACAGTAGTACATATGGGGATGTTCGTCCATTTGATGATACAAAACCACCGAATCTACCCGATGAATTTCATCAACTGGTTGAAAAGGCAATCAAAGATTCTTATGCCATTATGGGGAAAGATTCAACAATAAAAAATCCTGAACGTGTACTTCCAGGGATGAAGCCAAACATCTGTATTGTAAACTTCTACTCACAAAATGGACGATTAGATCTTCATCAGGATCGAGATGAAAGTCAAGAAAGTCTCGATAAAGGATTGCCTGTTGTCTCCTTCTCCATTGGTGACTCTGCAGAATTCCTATTTGGTGATCGGAGTGACGTTGATCAAGCAGAGAAAGTTACTTTGGAATCCGGAGATATCTTGATATTTGGTGGGAAATCAAGACATGTTTTCCATGGGGTGACTGCAATTCATCCAAACACTGCTCCAAAAGCACTTTTAGAATCAACAAATCTTCGTCCAGGTCGTTTGAATCTTACTTTCCGTCAGTACTGAAAGCTTTTTTTTTTTTCTCATCTAGGGAGATATCCATGAAACAACGCCCTTATATATAATACAGTTCCATGTTTCCCTCTAACAACGCCCTTATAATACAGTTCCATGTTTCCCTCTAGTGCCTTCGGGAAGTTGGTTTTGTTTTACTTAACACATTTCAAAAGTTTCGTCGTAATAGATTCTTGATGCTGTACAGAGGTAGATATTAGTTGTAATTTATTATCCGATGGGAAATTTTATGGCTTTGCAAGAACTTTCTCATATTGTGCAGTTGTAGTCTTTTGCATCACAGTGAAGAGTGGTTGTGAAGGAATTTTTGTTGGGAGTTCTGATCTCTGGAAGGAGTTTCTTCTCTTGTGTTAGTTACCATGGAATCACCCAATTGACTGCCATTTTG ATGAATGACGGTGGCCCTAGATATGCTGGAAGAGGCCATCCGAATAACAGAGGACGATCTCCTCGCTCTGCCGATAATTTCATTTATCGTCCCCGTCATGCTGGAGGTGAGGGGCCCTCTGTTGCTGGTTCTTCTAACACTGGTAGTGGAGCTTTCCGAGCGAGAAGTTCTCACCAGATGTCATCAAGGAATTTCAGGAAGCCTGTTGGACAGAAACAGGCCTCGAGTTCTGAACAGTGGCAGTGGCGGCCTTTAAATAGTGGGAAAGATGCATCTCCTTGTGCTGTTGATCTTCAGCTGGAACATAATTCAACTGATGATATGAGCAATACCTCTAAAAAATTATTGGGATCTATTGCATCAAATTCTGATAGCAATCAAATGAGCAATACCTCTGAGCAACTATTGGGATCTATTGCTTCAAATTCTGATAGCAATCAAATGAGCAATACCTCTGAACAACTATTGGGATCTGTTGCATCAAATTCTGATTGCATCGAACTCCCGCCCTCTTCTGCTGAAAATGTCTTTAAGAGTTTGCATTCTGCTGTAGAAAGAATTCAGATTCGGGAACCTACAGCGGTAGGGGGAAGTTGTAGTGATTCATTTCCTTATGATAATTGCAACAGATCAGATGCTGTTGGACAGGAACTCAAGGTTCAACTTACCTTGGAATCCTGTGTGAAAGATGAGAGTTCCACCATAAAACTAAGGGAAAGTAATAATGTTTCTGACTCTACGGACTCAAAAGACAAGAAGCCTTCAGTGAACCTCGATCCTTTTGATATATGCCCTCTAAAGTCTGGAGTTGTCATGCTGAATCCTTCTTTATTGGCTAAGAACAGAGAAAAGAGGAATGAGATGAAGCGTGCAATGGAGGGAAATAGTGGAATTGTGTTAAGATCAGGAATGGTTCATTTGAAGAGTGGCATTTCCCTTAGGGATCAGGTAAAGATAGTAAAAAGATGTCGGGATCTTGGTGTTGGACCTGGAGGATTTTACCAACCTGGTTACCGTGAAGGAGGAAAGCTACACTTGAAAATGATGTGCCTAGGTAAAAATTGGGATCCTGACAGTAGTACATATGGGGATGTTCGTCCATTTGATGATACAAAACCACCGAATCTACCCGATGAATTTCATCAACTGGTTGAAAAGGCAATCAAAGATTCTTATGCCATTATGGGGAAAGATTCAACAATAAAAAATCCTGAACGTGTACTTCCAGGGATGAAGCCAAACATCTGTATTGTAAACTTCTACTCACAAAATGGACGATTAGATCTTCATCAGGATCGAGATGAAAGTCAAGAAAGTCTCGATAAAGGATTGCCTGTTGTCTCCTTCTCCATTGGTGACTCTGCAGAATTCCTATTTGGTGATCGGAGTGACGTTGATCAAGCAGAGAAAGTTACTTTGGAATCCGGAGATATCTTGATATTTGGTGGGAAATCAAGACATGTTTTCCATGGGGTGACTGCAATTCATCCAAACACTGCTCCAAAAGCACTTTTAGAATCAACAAATCTTCGTCCAGGTCGTTTGAATCTTACTTTCCGTCAGTACTGA MNDGGPRYAGRGHPNNRGRSPRSADNFIYRPRHAGGEGPSVAGSSNTGSGAFRARSSHQMSSRNFRKPVGQKQASSSEQWQWRPLNSGKDASPCAVDLQLEHNSTDDMSNTSKKLLGSIASNSDSNQMSNTSEQLLGSIASNSDSNQMSNTSEQLLGSVASNSDCIELPPSSAENVFKSLHSAVERIQIREPTAVGGSCSDSFPYDNCNRSDAVGQELKVQLTLESCVKDESSTIKLRESNNVSDSTDSKDKKPSVNLDPFDICPLKSGVVMLNPSLLAKNREKRNEMKRAMEGNSGIVLRSGMVHLKSGISLRDQVKIVKRCRDLGVGPGGFYQPGYREGGKLHLKMMCLGKNWDPDSSTYGDVRPFDDTKPPNLPDEFHQLVEKAIKDSYAIMGKDSTIKNPERVLPGMKPNICIVNFYSQNGRLDLHQDRDESQESLDKGLPVVSFSIGDSAEFLFGDRSDVDQAEKVTLESGDILIFGGKSRHVFHGVTAIHPNTAPKALLESTNLRPGRLNLTFRQY
BLAST of Lsi07G006230 vs. Swiss-Prot
Match: ALKB_CAUCN (Alpha-ketoglutarate-dependent dioxygenase AlkB homolog OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=alkB PE=3 SV=2) HSP 1 Score: 83.6 bits (205), Expect = 7.1e-15 Identity = 64/195 (32.82%), Postives = 89/195 (45.64%), Query Frame = 1
BLAST of Lsi07G006230 vs. Swiss-Prot
Match: ALKB_CAUCR (Alpha-ketoglutarate-dependent dioxygenase AlkB homolog OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=alkB PE=3 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 7.1e-15 Identity = 64/195 (32.82%), Postives = 89/195 (45.64%), Query Frame = 1
BLAST of Lsi07G006230 vs. Swiss-Prot
Match: ALKBH_SCHPO (Alpha-ketoglutarate-dependent dioxygenase abh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=abh1 PE=2 SV=3) HSP 1 Score: 82.8 bits (203), Expect = 1.2e-14 Identity = 58/181 (32.04%), Postives = 80/181 (44.20%), Query Frame = 1
BLAST of Lsi07G006230 vs. Swiss-Prot
Match: ALKB_ECOLI (Alpha-ketoglutarate-dependent dioxygenase AlkB OS=Escherichia coli (strain K12) GN=alkB PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.2e-14 Identity = 49/160 (30.63%), Postives = 76/160 (47.50%), Query Frame = 1
BLAST of Lsi07G006230 vs. Swiss-Prot
Match: ALKB_SALTY (Alpha-ketoglutarate-dependent dioxygenase AlkB OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=alkB PE=3 SV=2) HSP 1 Score: 79.3 bits (194), Expect = 1.3e-13 Identity = 57/176 (32.39%), Postives = 77/176 (43.75%), Query Frame = 1
BLAST of Lsi07G006230 vs. TrEMBL
Match: A0A0A0LC72_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G651830 PE=4 SV=1) HSP 1 Score: 823.9 bits (2127), Expect = 1.1e-235 Identity = 423/522 (81.03%), Postives = 449/522 (86.02%), Query Frame = 1
BLAST of Lsi07G006230 vs. TrEMBL
Match: A0A061GD55_THECC (2-oxoglutarate-dependent dioxygenase family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_029204 PE=4 SV=1) HSP 1 Score: 401.0 bits (1029), Expect = 2.3e-108 Identity = 200/301 (66.45%), Postives = 238/301 (79.07%), Query Frame = 1
BLAST of Lsi07G006230 vs. TrEMBL
Match: W9RP27_9ROSA (Alpha-ketoglutarate-dependent dioxygenase AlkB OS=Morus notabilis GN=L484_005039 PE=4 SV=1) HSP 1 Score: 382.9 bits (982), Expect = 6.3e-103 Identity = 185/310 (59.68%), Postives = 232/310 (74.84%), Query Frame = 1
BLAST of Lsi07G006230 vs. TrEMBL
Match: A0A0D2RCG1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G235600 PE=4 SV=1) HSP 1 Score: 378.3 bits (970), Expect = 1.6e-101 Identity = 188/295 (63.73%), Postives = 224/295 (75.93%), Query Frame = 1
BLAST of Lsi07G006230 vs. TrEMBL
Match: M5WUR8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016882mg PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 7.8e-101 Identity = 185/314 (58.92%), Postives = 235/314 (74.84%), Query Frame = 1
BLAST of Lsi07G006230 vs. TAIR10
Match: AT3G14160.1 (AT3G14160.1 2-oxoglutarate-dependent dioxygenase family protein) HSP 1 Score: 335.1 bits (858), Expect = 7.7e-92 Identity = 175/316 (55.38%), Postives = 224/316 (70.89%), Query Frame = 1
BLAST of Lsi07G006230 vs. TAIR10
Match: AT5G01780.2 (AT5G01780.2 2-oxoglutarate-dependent dioxygenase family protein) HSP 1 Score: 283.5 bits (724), Expect = 2.7e-76 Identity = 151/302 (50.00%), Postives = 204/302 (67.55%), Query Frame = 1
BLAST of Lsi07G006230 vs. TAIR10
Match: AT3G14140.1 (AT3G14140.1 2-oxoglutarate-dependent dioxygenase family protein) HSP 1 Score: 268.1 bits (684), Expect = 1.2e-71 Identity = 142/299 (47.49%), Postives = 194/299 (64.88%), Query Frame = 1
BLAST of Lsi07G006230 vs. TAIR10
Match: AT1G11780.1 (AT1G11780.1 oxidoreductase, 2OG-Fe(II) oxygenase family protein) HSP 1 Score: 59.3 bits (142), Expect = 8.1e-09 Identity = 46/150 (30.67%), Postives = 63/150 (42.00%), Query Frame = 1
BLAST of Lsi07G006230 vs. NCBI nr
Match: gi|659127991|ref|XP_008463993.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103501985 [Cucumis melo]) HSP 1 Score: 865.1 bits (2234), Expect = 6.0e-248 Identity = 445/522 (85.25%), Postives = 464/522 (88.89%), Query Frame = 1
BLAST of Lsi07G006230 vs. NCBI nr
Match: gi|778682576|ref|XP_011651736.1| (PREDICTED: uncharacterized protein LOC101205291 [Cucumis sativus]) HSP 1 Score: 823.9 bits (2127), Expect = 1.5e-235 Identity = 423/522 (81.03%), Postives = 449/522 (86.02%), Query Frame = 1
BLAST of Lsi07G006230 vs. NCBI nr
Match: gi|700203366|gb|KGN58499.1| (hypothetical protein Csa_3G651830 [Cucumis sativus]) HSP 1 Score: 823.9 bits (2127), Expect = 1.5e-235 Identity = 423/522 (81.03%), Postives = 449/522 (86.02%), Query Frame = 1
BLAST of Lsi07G006230 vs. NCBI nr
Match: gi|590621107|ref|XP_007024711.1| (2-oxoglutarate-dependent dioxygenase family protein, putative isoform 1 [Theobroma cacao]) HSP 1 Score: 401.0 bits (1029), Expect = 3.2e-108 Identity = 200/301 (66.45%), Postives = 238/301 (79.07%), Query Frame = 1
BLAST of Lsi07G006230 vs. NCBI nr
Match: gi|1009111586|ref|XP_015901656.1| (PREDICTED: uncharacterized protein LOC107434680 [Ziziphus jujuba]) HSP 1 Score: 399.1 bits (1024), Expect = 1.2e-107 Identity = 188/267 (70.41%), Postives = 226/267 (84.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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