Lsi07G002720 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAAAAAATATATGTAAAAATGAATGAAAATTATTTGGGCCTACGGCAATCTTAAGGGCATCCTCCTCTACCGCTATCTCCGAATCCTTATCCACACCCAATTGCTCAAATTCTTGTCTTCTTCCTTATCTCTTCTTTCATTCTACTCTCACAAACTATATCTAAATCTAATCCTTCATCTTCGCCCGTTTTCTATATTCATTTTATACTCATTTGCACCTTCTTGTAATCATTGGAATCGATTTGGAGTAAAACCCACCTTTTTTTTTCTTCCTGTTTTTCTCTTCCTCTCTTGAAACCCTCGATTAATCTATATGCTTTGACGCCAATCTGTTTGATTAAATTTGAGGGTTTTTCTTTTTCTTTTTTACTCGATTCGAATGGCTTTGCTTTCGATTTTGGCGGAGATTTTGGGGAGACCCAGAATTGTTGATGTGCTTAGCGAGCTTATGATCTTGATTGCTCCCCTTTGGATTGCGGTTATTGTTGGAGTTTTGGTGGGGTGGACTTGGAAACCGAAATGGGCTAATTTGGGAAGAGAAATGTTGGATTCTTCAGTTTCGGATGATTCTAAGTCGACATCGACTTCTTTTTCGCTGTTGGGGTCAATTCCGAGCTTCAATTCCTTGAACTTTCAGATGCCCAGCTGCATACTTAGCTCCTTCGATGGAAAATATGAGAAGGAAACTTCCTCCCCGCCGTCAAGTCCTGATTCTTTCTCCAGGTTGTTTAGTTGTTCTTTCAAGCAATAATACAGTGGGTTGATTATTATCCACAGAGTTAATTGTAGCTGGTGAAGTTTAGTTATTTGTACTGGGTGGGTTGAAGTTGTGAATTTGGTTATGCTTTGTTAATAATCATTTCTAACATCTGATTTGTTGTGCGCCAGTTCGACAGAACTTGAAGGAGAAAATTTGAGAGTTGTGAATGAAGATGATTTGGAATACTTATGTAAGCTAGTTGAAGAGAAAGATGGAGGACCTGCGTGGATTAAAATGATGGATCGCTCTACTTCGAATATGAGTTATCAAGCATGGAGAAGAGATCCTGAGGTAGCACTCCTTTGCTTGCAAAACAATGATTTCAGTGGAACTTTTTAATGAATGTGTTTAAGACATTTATAAGTTAAGTAATATATTGTTCATAATTCATATGCAGCTCTTAGTTTATCAATTGAATTAAAGTAAATATATTTGACTCATTGAATTAGTGTTCATTTATGAATGATCAAGGTATGGTATTCATGTAAAATGGGTTTCATATTGAATTCATTTTGTTCCAAATGATAGCTGCAGTCTTGCTGTCTTACATTGTTTTATCAGCCTTGATTTTGTCCAAGTCCTATTTCTGTCCAATTCGCAGCCTGTACACTTAGTAACTTACTGTACTATTTCACTCTGGTGTGTGGCCTTACCAGACTGGACCTCCACAATATAGAAGTAGAACAGTGTATGAAAATGCAACTCCGGAGATTGTGAGGGATTTCTTTTGGGATGATGATTTTCGGTCAAAATGGGATGACATGCTTATATCTGCTACAACTTTGGCAGAATGCCCAACAACAGGAACCATGGTAGTTCATTGGGTACGCAAGGTGAGGCAGCTATTTTCTTTTAGTATTTGTGCTATAAATTCTTTATTCCCCTTTTATTTTGGTGGGACACTGTTTTATGGTGCTTTTCCTTTTTCTTTGGTGCTTCAGTTTCCTTTCTTCTGTAGTGACAGAGAGTATATAATTGGGCGACGAATTTGGGAAGCAGGACGATCATATTACTGTGTCACAAAGGTATAACTAGTAATCATCCCTGCCCCATGGCATGATACCATGTGTTTGTTCCCCTGTTTTTTCCCCTTCTTATTCTTCTATTTATTTCCTCTTTGAATTTTACTATCTTTCTGATTAACCTTGTGTTGTCTTGATTGTGCTATGTTTTGTTCTTACATTAACCCTTCTGTACCCAGTAGAAGGCAGATTGAATAGAAAAATGAGTCTAGCTGATGTATTCTGCAAAAGTGAGAGAATACGGAGCTTTAAGCTCCCTGGTGCATTAAATTATGTGTATATCAGGGACCTACGCTTTGTCATTGTTATTTGTATTATTTATTGGTATTATCTATGGTGTATTCGTGTCCCCCTTCCACTGAATGAGCATCCATTCGCATGGACATCCCCTGATGTGCAATTATTGAAAAACGTGCTTTCTGATACCTATCAAACTCATGTTTGCTCTTTACATCCAACAGTGAATAGCCCATGCCCATGCGGTGAGCCACTCAATCAAACAGCTAGGGATCTCTTTCCCCTCTACTCTTTTGATCCTCTCAAGATCAATCCTAAACCTGGATTGAATAACAAAACATGTTCAATATTGGTTGGGACCCTCATCCTAGTTCTTGCACTAACTGAGTCTGTTTCACCACATTGTGCTATGTTTTGTTCTTACATTAAACCTTCTGTACGCCCACTACCCTAAGTAGTATGAAGAGTTCTAGAATAAAATCATTATCTTTGTGATGAATGGAACTACAATCTGTGTGTTGATCCGAAGAGGGTGTGTTTGTGTTGATATTACAATCATGTTTCATTCAATCCAAGTTCATTAGTTTATAGGTAAATGTGATGCCGAGACATTTTAGTTAGTCACTCTTCCTTTTATCTTGGTGTCACTCCTATTTAATACATGGTAGCCCTCATGAACAGGTCTGTGGATTTTCTTTGTAGAAGTACTCTAATGTCTGTTCTTCTGCCAATAATTAATTTTCTGGCAATAACTCGTTGATCTTTTATCTTTGTTTAGAGTGTACCATGTTCCTCTATTCCAAGACGCAACAAACCAAGACGGGTTGATTTGTACTATTCGAGCTGGTGCATTCGTGCAGGTAACTATATTCTTCTGTATTATTTCGCCTTAGTGTTACATTTCCACATGCTATCATGTTGTGTTATTGCAAAGTAGTTGTTCTCAGAGCAGAAGAAAATGTGAGGGCCCCAAAAATGTTTCAGAATCCCTTTCCCTATTCTATTTCATTTCTCTTTTCTACTTGGAAGTTAGTTCCTCATCCCTTTTAAGATGTGACTTAGAGAGTTTTTGTTCCCCTCTGATTGGATATCTGAGCAGTTGAATCAAAAAAGGGGGACGGACAGCTAACTGCATGTGAGGTTATACTGTTTCACTATGAAGATATGGGCATTCCTTGGGAAATTGCTAAGCTCGGGGTTCGGCAGGGAATGTGGGGAACTGTTAAAAAGATTGATCCCGGACTACGAGCATACCAAAAAGAGAGAGCATCGCGTTCCACCATACCACACTGCGCCTTCATGGCTCAGATCAACACTAAGGTTAATGTAGACTACTTGAGATCTCTGGAAAACAGCTCTCATAATGATTCATTGGAAGATCAAAGCAGTTCAAAGTCATCTGAAAAACCAGTTGGGAAGAACATTCCCAAACTGCTTGTGGTTGGTGGAGCTATTGCTCTAGCCTGCACTATTGACCGTGGACTATTAACAAAGGCAGTCATATTTGGAATTGGCAGACGGTTTGCCAAGATTGGGAGGAGATTATGAACTGATGCTAGCAGGCTCAAGTTTTTTTTTTTTTTGTTTTTCCTGGTCACAATGCCTATACATAACAACCTGCTTATTTGCATTAGTTTTTTGTTTATATTTTTCGTTCGTGTTTGTCCCGGATAGAAAGAGAATAGAATGTCAATACCACCTAGGTGGACGGGAACAAAACTCGACTTTATCGGGGCGTAGAAATGGAATGTCTTTAAGCAGCAACCAGAATGTGTAGGCTCTTAAATTTGTGCATCATTCTTCTCTTCATCCTTCATTGAAGATGATAATGGCAGCAGATGTGGATATCAGTTGGTTTGTGAATGTGGACAGCAATTTTCTATTTGTAAACACTGCTATGGGGAGTAGGAGACTATCAAACCAAAAGCACTTCCCCGCTAATCATGGAGTGGCTTAAAGACACTTTAAAAAGTTTAGGAAAAAGTGTTGTTAGTGTTTTAGGTCGAAATTTTAAGGAGAGTTTGACATACTTTCTAATTTTAACTTTTTAATT TTTAAAAAATATATGTAAAAATGAATGAAAATTATTTGGGCCTACGGCAATCTTAAGGGCATCCTCCTCTACCGCTATCTCCGAATCCTTATCCACACCCAATTGCTCAAATTCTTGTCTTCTTCCTTATCTCTTCTTTCATTCTACTCTCACAAACTATATCTAAATCTAATCCTTCATCTTCGCCCGTTTTCTATATTCATTTTATACTCATTTGCACCTTCTTGTAATCATTGGAATCGATTTGGAGTAAAACCCACCTTTTTTTTTCTTCCTGTTTTTCTCTTCCTCTCTTGAAACCCTCGATTAATCTATATGCTTTGACGCCAATCTGTTTGATTAAATTTGAGGGTTTTTCTTTTTCTTTTTTACTCGATTCGAATGGCTTTGCTTTCGATTTTGGCGGAGATTTTGGGGAGACCCAGAATTGTTGATGTGCTTAGCGAGCTTATGATCTTGATTGCTCCCCTTTGGATTGCGGTTATTGTTGGAGTTTTGGTGGGGTGGACTTGGAAACCGAAATGGGCTAATTTGGGAAGAGAAATGTTGGATTCTTCAGTTTCGGATGATTCTAAGTCGACATCGACTTCTTTTTCGCTGTTGGGGTCAATTCCGAGCTTCAATTCCTTGAACTTTCAGATGCCCAGCTGCATACTTAGCTCCTTCGATGGAAAATATGAGAAGGAAACTTCCTCCCCGCCGTCAAGTCCTGATTCTTTCTCCAGTTCGACAGAACTTGAAGGAGAAAATTTGAGAGTTGTGAATGAAGATGATTTGGAATACTTATGTAAGCTAGTTGAAGAGAAAGATGGAGGACCTGCGTGGATTAAAATGATGGATCGCTCTACTTCGAATATGAGTTATCAAGCATGGAGAAGAGATCCTGAGACTGGACCTCCACAATATAGAAGTAGAACAGTGTATGAAAATGCAACTCCGGAGATTGTGAGGGATTTCTTTTGGGATGATGATTTTCGGTCAAAATGGGATGACATGCTTATATCTGCTACAACTTTGGCAGAATGCCCAACAACAGGAACCATGGTAGTTCATTGGGTACGCAAGAGTGTACCATGTTCCTCTATTCCAAGACGCAACAAACCAAGACGGGTTGATTTGTACTATTCGAGCTGGTGCATTCGTGCAGTTGAATCAAAAAAGGGGGACGGACAGCTAACTGCATGTGAGGTTATACTGTTTCACTATGAAGATATGGGCATTCCTTGGGAAATTGCTAAGCTCGGGGTTCGGCAGGGAATGTGGGGAACTGTTAAAAAGATTGATCCCGGACTACGAGCATACCAAAAAGAGAGAGCATCGCGTTCCACCATACCACACTGCGCCTTCATGGCTCAGATCAACACTAAGGTTAATGTAGACTACTTGAGATCTCTGGAAAACAGCTCTCATAATGATTCATTGGAAGATCAAAGCAGTTCAAAGTCATCTGAAAAACCAGTTGGGAAGAACATTCCCAAACTGCTTGTGGTTGGTGGAGCTATTGCTCTAGCCTGCACTATTGACCGTGGACTATTAACAAAGGCAGTCATATTTGGAATTGGCAGACGGTTTGCCAAGATTGGGAGGAGATTATGAACTGATGCTAGCAGGCTCAAGTTTTTTTTTTTTTTGTTTTTCCTGGTCACAATGCCTATACATAACAACCTGCTTATTTGCATTAGTTTTTTGTTTATATTTTTCGTTCGTGTTTGTCCCGGATAGAAAGAGAATAGAATGTCAATACCACCTAGGTGGACGGGAACAAAACTCGACTTTATCGGGGCGTAGAAATGGAATGTCTTTAAGCAGCAACCAGAATGTGTAGGCTCTTAAATTTGTGCATCATTCTTCTCTTCATCCTTCATTGAAGATGATAATGGCAGCAGATGTGGATATCAGTTGGTTTGTGAATGTGGACAGCAATTTTCTATTTGTAAACACTGCTATGGGGAGTAGGAGACTATCAAACCAAAAGCACTTCCCCGCTAATCATGGAGTGGCTTAAAGACACTTTAAAAAGTTTAGGAAAAAGTGTTGTTAGTGTTTTAGGTCGAAATTTTAAGGAGAGTTTGACATACTTTCTAATTTTAACTTTTTAATT ATGGCTTTGCTTTCGATTTTGGCGGAGATTTTGGGGAGACCCAGAATTGTTGATGTGCTTAGCGAGCTTATGATCTTGATTGCTCCCCTTTGGATTGCGGTTATTGTTGGAGTTTTGGTGGGGTGGACTTGGAAACCGAAATGGGCTAATTTGGGAAGAGAAATGTTGGATTCTTCAGTTTCGGATGATTCTAAGTCGACATCGACTTCTTTTTCGCTGTTGGGGTCAATTCCGAGCTTCAATTCCTTGAACTTTCAGATGCCCAGCTGCATACTTAGCTCCTTCGATGGAAAATATGAGAAGGAAACTTCCTCCCCGCCGTCAAGTCCTGATTCTTTCTCCAGTTCGACAGAACTTGAAGGAGAAAATTTGAGAGTTGTGAATGAAGATGATTTGGAATACTTATGTAAGCTAGTTGAAGAGAAAGATGGAGGACCTGCGTGGATTAAAATGATGGATCGCTCTACTTCGAATATGAGTTATCAAGCATGGAGAAGAGATCCTGAGACTGGACCTCCACAATATAGAAGTAGAACAGTGTATGAAAATGCAACTCCGGAGATTGTGAGGGATTTCTTTTGGGATGATGATTTTCGGTCAAAATGGGATGACATGCTTATATCTGCTACAACTTTGGCAGAATGCCCAACAACAGGAACCATGGTAGTTCATTGGGTACGCAAGAGTGTACCATGTTCCTCTATTCCAAGACGCAACAAACCAAGACGGGTTGATTTGTACTATTCGAGCTGGTGCATTCGTGCAGTTGAATCAAAAAAGGGGGACGGACAGCTAACTGCATGTGAGGTTATACTGTTTCACTATGAAGATATGGGCATTCCTTGGGAAATTGCTAAGCTCGGGGTTCGGCAGGGAATGTGGGGAACTGTTAAAAAGATTGATCCCGGACTACGAGCATACCAAAAAGAGAGAGCATCGCGTTCCACCATACCACACTGCGCCTTCATGGCTCAGATCAACACTAAGGTTAATGTAGACTACTTGAGATCTCTGGAAAACAGCTCTCATAATGATTCATTGGAAGATCAAAGCAGTTCAAAGTCATCTGAAAAACCAGTTGGGAAGAACATTCCCAAACTGCTTGTGGTTGGTGGAGCTATTGCTCTAGCCTGCACTATTGACCGTGGACTATTAACAAAGGCAGTCATATTTGGAATTGGCAGACGGTTTGCCAAGATTGGGAGGAGATTATGA MALLSILAEILGRPRIVDVLSELMILIAPLWIAVIVGVLVGWTWKPKWANLGREMLDSSVSDDSKSTSTSFSLLGSIPSFNSLNFQMPSCILSSFDGKYEKETSSPPSSPDSFSSSTELEGENLRVVNEDDLEYLCKLVEEKDGGPAWIKMMDRSTSNMSYQAWRRDPETGPPQYRSRTVYENATPEIVRDFFWDDDFRSKWDDMLISATTLAECPTTGTMVVHWVRKSVPCSSIPRRNKPRRVDLYYSSWCIRAVESKKGDGQLTACEVILFHYEDMGIPWEIAKLGVRQGMWGTVKKIDPGLRAYQKERASRSTIPHCAFMAQINTKVNVDYLRSLENSSHNDSLEDQSSSKSSEKPVGKNIPKLLVVGGAIALACTIDRGLLTKAVIFGIGRRFAKIGRRL
BLAST of Lsi07G002720 vs. TrEMBL
Match: A0A0A0KWS1_CUCSA (Phosphatidylcholine transfer protein OS=Cucumis sativus GN=Csa_4G047900 PE=4 SV=1) HSP 1 Score: 765.0 bits (1974), Expect = 4.6e-218 Identity = 391/432 (90.51%), Postives = 395/432 (91.44%), Query Frame = 1
BLAST of Lsi07G002720 vs. TrEMBL
Match: A0A061G3R2_THECC (Polyketide cyclase/dehydrase and lipid transport superfamily protein OS=Theobroma cacao GN=TCM_015607 PE=4 SV=1) HSP 1 Score: 566.2 bits (1458), Expect = 3.1e-158 Identity = 291/435 (66.90%), Postives = 345/435 (79.31%), Query Frame = 1
BLAST of Lsi07G002720 vs. TrEMBL
Match: A0A067JZ22_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20381 PE=4 SV=1) HSP 1 Score: 564.3 bits (1453), Expect = 1.2e-157 Identity = 288/432 (66.67%), Postives = 337/432 (78.01%), Query Frame = 1
BLAST of Lsi07G002720 vs. TrEMBL
Match: F6HU88_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g02820 PE=4 SV=1) HSP 1 Score: 559.3 bits (1440), Expect = 3.8e-156 Identity = 297/442 (67.19%), Postives = 340/442 (76.92%), Query Frame = 1
BLAST of Lsi07G002720 vs. TrEMBL
Match: B9RYW5_RICCO (Phosphatidylcholine transfer protein, putative OS=Ricinus communis GN=RCOM_1314180 PE=4 SV=1) HSP 1 Score: 546.2 bits (1406), Expect = 3.4e-152 Identity = 285/436 (65.37%), Postives = 330/436 (75.69%), Query Frame = 1
BLAST of Lsi07G002720 vs. TAIR10
Match: AT1G64720.1 (AT1G64720.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 432.6 bits (1111), Expect = 2.7e-121 Identity = 231/412 (56.07%), Postives = 279/412 (67.72%), Query Frame = 1
BLAST of Lsi07G002720 vs. TAIR10
Match: AT5G54170.1 (AT5G54170.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 327.4 bits (838), Expect = 1.2e-89 Identity = 188/446 (42.15%), Postives = 257/446 (57.62%), Query Frame = 1
BLAST of Lsi07G002720 vs. TAIR10
Match: AT3G23080.1 (AT3G23080.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 307.4 bits (786), Expect = 1.3e-83 Identity = 173/436 (39.68%), Postives = 246/436 (56.42%), Query Frame = 1
BLAST of Lsi07G002720 vs. TAIR10
Match: AT4G14500.1 (AT4G14500.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 307.0 bits (785), Expect = 1.7e-83 Identity = 180/440 (40.91%), Postives = 253/440 (57.50%), Query Frame = 1
BLAST of Lsi07G002720 vs. TAIR10
Match: AT3G13062.2 (AT3G13062.2 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 87.8 bits (216), Expect = 1.7e-17 Identity = 86/324 (26.54%), Postives = 143/324 (44.14%), Query Frame = 1
BLAST of Lsi07G002720 vs. NCBI nr
Match: gi|449457564|ref|XP_004146518.1| (PREDICTED: uncharacterized protein LOC101209389 [Cucumis sativus]) HSP 1 Score: 765.0 bits (1974), Expect = 6.6e-218 Identity = 391/432 (90.51%), Postives = 395/432 (91.44%), Query Frame = 1
BLAST of Lsi07G002720 vs. NCBI nr
Match: gi|659102280|ref|XP_008452046.1| (PREDICTED: uncharacterized protein LOC103493171 [Cucumis melo]) HSP 1 Score: 757.3 bits (1954), Expect = 1.4e-215 Identity = 388/432 (89.81%), Postives = 392/432 (90.74%), Query Frame = 1
BLAST of Lsi07G002720 vs. NCBI nr
Match: gi|590675045|ref|XP_007039336.1| (Polyketide cyclase/dehydrase and lipid transport superfamily protein [Theobroma cacao]) HSP 1 Score: 566.2 bits (1458), Expect = 4.5e-158 Identity = 291/435 (66.90%), Postives = 345/435 (79.31%), Query Frame = 1
BLAST of Lsi07G002720 vs. NCBI nr
Match: gi|802733517|ref|XP_012086635.1| (PREDICTED: uncharacterized protein LOC105645602 [Jatropha curcas]) HSP 1 Score: 564.3 bits (1453), Expect = 1.7e-157 Identity = 288/432 (66.67%), Postives = 337/432 (78.01%), Query Frame = 1
BLAST of Lsi07G002720 vs. NCBI nr
Match: gi|225426534|ref|XP_002278777.1| (PREDICTED: uncharacterized protein LOC100247984 [Vitis vinifera]) HSP 1 Score: 559.3 bits (1440), Expect = 5.5e-156 Identity = 297/442 (67.19%), Postives = 340/442 (76.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |