Lsi07G001870 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi07G001870
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionMitochondrial transcription termination factor family protein, putative
Locationchr07 : 2048644 .. 2049630 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTGCCGTAAAGGCGTTGTATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCGACGCCCACATTCAATCGGCGATTCGACTCGTGCCGCAGATTGCGTTTTCTAGCATTGAAAAAACTCTGAAACCGAAGATTGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCTGATTTGGGTAAGTTCATTTCCAGGCATTCTTCGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCCAGTGTTGAGATTCTTAAGAATGTTTTCCCCAAGGATAATTGTAATAGAGATCTCCTGTGTGTTATGCGGCGATGTTCTGATATGGTTATGAGATCCCCGTATAAAAGGTTGTCTGTAAATATTAATTACTTACAAAGTTGTGGGATTGTTGATTCTCAACTCTCTATGTTACTGAAGATGCAACCTGCATTTTTTGGTAAGCGTGAATCTCGAGTTAAAGATATTGTTTCCATGGTTGTAGAAACTGGTTTTTCTACCGATACTAAAATGTTTGTTCATGGACTTCAAGCTATCAGTTGTGTAAGTAATGCGACCTTTAACAAGAAAGTGGACCTGATTTGTAGCTTTGGAATAACTGAGAAAGAATGTATGAGAATGTTTACTTCTGCTCCTTTTTTGATAAGGACTTCCATTGATAAACTTAAGCTTGGTCTAGAATTCTTCATGAATGAGGCAAAACTTAGCAAATCACATATTCTTGGTAAACCTACTTGTTTGATGCACTCCATGCAGGGGAGGGTGCTCCCTCGTTATAGAGTTCTACAGGTTGTGAAGTCGAAGAGGCTATTGAAGAAGCAACCCAAATTTATCCATATATTGGGGATGTCTGATCAGGATTTCTTGGATAAATTCGTGTGTAGGTTTCCTGATAATATGAAAGATTTGTTGGTGGCCTTTAGAGGTAATTCTGTGGGTGCATTTCAGCCTAAGGAGTTAACAACATGA

mRNA sequence

ATGAGCTGCCGTAAAGGCGTTGTATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCGACGCCCACATTCAATCGGCGATTCGACTCGTGCCGCAGATTGCGTTTTCTAGCATTGAAAAAACTCTGAAACCGAAGATTGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCTGATTTGGGTAAGTTCATTTCCAGGCATTCTTCGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCCAGTGTTGAGATTCTTAAGAATGTTTTCCCCAAGGATAATTGTAATAGAGATCTCCTGTGTGTTATGCGGCGATGTTCTGATATGGTTATGAGATCCCCGTATAAAAGGTTGTCTGTAAATATTAATTACTTACAAAGTTGTGGGATTGTTGATTCTCAACTCTCTATGTTACTGAAGATGCAACCTGCATTTTTTGGTAAGCGTGAATCTCGAGTTAAAGATATTGTTTCCATGGTTGTAGAAACTGGTTTTTCTACCGATACTAAAATGTTTGTTCATGGACTTCAAGCTATCAGTTGTGTAAGTAATGCGACCTTTAACAAGAAAGTGGACCTGATTTGTAGCTTTGGAATAACTGAGAAAGAATGTATGAGAATGTTTACTTCTGCTCCTTTTTTGATAAGGACTTCCATTGATAAACTTAAGCTTGGTCTAGAATTCTTCATGAATGAGGCAAAACTTAGCAAATCACATATTCTTGGTAAACCTACTTGTTTGATGCACTCCATGCAGGGGAGGGTGCTCCCTCGTTATAGAGTTCTACAGGTTGTGAAGTCGAAGAGGCTATTGAAGAAGCAACCCAAATTTATCCATATATTGGGGATGTCTGATCAGGATTTCTTGGATAAATTCGTGTGTAGGTTTCCTGATAATATGAAAGATTTGTTGGTGGCCTTTAGAGGTAATTCTGTGGGTGCATTTCAGCCTAAGGAGTTAACAACATGA

Coding sequence (CDS)

ATGAGCTGCCGTAAAGGCGTTGTATCAACGGAAAAGCCTCAATCCGTTTACAAATATCTTTCAGAGCTCGGATTCTCCGACGCCCACATTCAATCGGCGATTCGACTCGTGCCGCAGATTGCGTTTTCTAGCATTGAAAAAACTCTGAAACCGAAGATTGAGTTCTTCCAGAATCTTGGCTTGGTCGGCTCTGATTTGGGTAAGTTCATTTCCAGGCATTCTTCGCTTTTGACTGTTAGTTTGGAGAAGAAATTGATGCCCAGTGTTGAGATTCTTAAGAATGTTTTCCCCAAGGATAATTGTAATAGAGATCTCCTGTGTGTTATGCGGCGATGTTCTGATATGGTTATGAGATCCCCGTATAAAAGGTTGTCTGTAAATATTAATTACTTACAAAGTTGTGGGATTGTTGATTCTCAACTCTCTATGTTACTGAAGATGCAACCTGCATTTTTTGGTAAGCGTGAATCTCGAGTTAAAGATATTGTTTCCATGGTTGTAGAAACTGGTTTTTCTACCGATACTAAAATGTTTGTTCATGGACTTCAAGCTATCAGTTGTGTAAGTAATGCGACCTTTAACAAGAAAGTGGACCTGATTTGTAGCTTTGGAATAACTGAGAAAGAATGTATGAGAATGTTTACTTCTGCTCCTTTTTTGATAAGGACTTCCATTGATAAACTTAAGCTTGGTCTAGAATTCTTCATGAATGAGGCAAAACTTAGCAAATCACATATTCTTGGTAAACCTACTTGTTTGATGCACTCCATGCAGGGGAGGGTGCTCCCTCGTTATAGAGTTCTACAGGTTGTGAAGTCGAAGAGGCTATTGAAGAAGCAACCCAAATTTATCCATATATTGGGGATGTCTGATCAGGATTTCTTGGATAAATTCGTGTGTAGGTTTCCTGATAATATGAAAGATTTGTTGGTGGCCTTTAGAGGTAATTCTGTGGGTGCATTTCAGCCTAAGGAGTTAACAACATGA

Protein sequence

MSCRKGVVSTEKPQSVYKYLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVFPKDNCNRDLLCVMRRCSDMVMRSPYKRLSVNINYLQSCGIVDSQLSMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVHGLQAISCVSNATFNKKVDLICSFGITEKECMRMFTSAPFLIRTSIDKLKLGLEFFMNEAKLSKSHILGKPTCLMHSMQGRVLPRYRVLQVVKSKRLLKKQPKFIHILGMSDQDFLDKFVCRFPDNMKDLLVAFRGNSVGAFQPKELTT
Homology
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BLAST of Lsi07G001870 vs. Swiss-Prot
Match: MTEF9_ARATH (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.9e-06
Identity = 68/299 (22.74%), Postives = 128/299 (42.81%), Query Frame = 1 

Query: 19  YLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGKFISRHSSLLT 78
           YL  +G     I+  +   PQI   ++E  LK  I F   LG+  S +G+ ++   SL +
Sbjct: 225 YLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFS 284

Query: 79  VSLEKKLMPSVE-ILKNVFPKDNCNRDLLCVMRRCSDMVMRSPYKRLSVNINYLQSCGIV 138
            S+E  L P++  +++ V  K+    D+  V++    +++    +RL +  N        
Sbjct: 285 YSVENSLRPTIRYLIEEVGIKET---DVGKVVQLSPQILV----QRLDITWN-------- 344

Query: 139 DSQLSMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVHGLQAISCVSNATFNKKV 198
               +  + +       R+S VK +        +S D                  F  ++
Sbjct: 345 ----TRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDG----------------FLPRI 404

Query: 199 DLICSFGITEKECMRMFTSAPFLIRTSI-DKLKLGLEFFMNEAKLSKSHILGK-PTCLMH 258
           + + S G+   + +++ TS   ++  S+ D LK    + +NE   ++ HIL K P  L  
Sbjct: 405 NFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELN-NEVHILTKYPMYLSL 464

Query: 259 SMQGRVLPRYRVLQVVKSKRLLKKQPKFIHILGMSDQDFLDKFVCRFPDNMKDLLVAFR 315
           S+  R+ PR+R L  +K    ++K P  +  L  +D+ F  ++         D  +AFR
Sbjct: 465 SLDQRIRPRHRFLVELKK---VRKGPFPLSSLVPNDESFCQQWA----GTSVDTYLAFR 480

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BLAST of Lsi07G001870 vs. TrEMBL
Match: A0A0A0KUB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G036600 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.3e-122
Identity = 227/317 (71.61%), Postives = 258/317 (81.39%), Query Frame = 1 

Query: 1   MSCRKGVVSTEKPQSVYKYLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLG 60
           M+ R+G+ STEKP+SVYKYLS+LG SD  I+SA+R+ PQIAFSSIEKTLKPKIEF QNLG
Sbjct: 88  MATRRGIQSTEKPRSVYKYLSDLGLSDTQIKSAVRITPQIAFSSIEKTLKPKIEFLQNLG 147

Query: 61  LVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVFPKDNCNRDLLCVMRRCSDMVMRSP 120
            VGSDL KFISR S   + SLEK LMP+VEILKNV PK  CN DL  V+RRCSD++ RSP
Sbjct: 148 FVGSDLSKFISRQSKFFSSSLEKTLMPNVEILKNVLPKGTCNDDLPKVLRRCSDVLTRSP 207

Query: 121 YKRLSVNINYLQSCGIVDSQLSMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVH 180
           YK LSVNINYL+SCGIVD QLS LLK QPA F   ESR+KD VSM V+ GFS +  MF+H
Sbjct: 208 YKVLSVNINYLRSCGIVDYQLSTLLKRQPALFIMHESRLKDFVSMAVKAGFSPNGTMFIH 267

Query: 181 GLQAISCVSNATFNKKVDLICSFGITEKECMRMFTSAPFLIRTSIDKLKLGLEFFMNEAK 240
           GL +IS +SNAT+ KKV LICSFGITEKECMRMF SAP L+RTS+ KL++GLEFFMNEAK
Sbjct: 268 GLHSISSISNATYKKKVKLICSFGITEKECMRMFNSAPVLMRTSVGKLEVGLEFFMNEAK 327

Query: 241 LSKSHILGKPTCLMHSMQGRVLPRYRVLQVVKSKRLLKKQPKFIHILGMSDQDFLDKFVC 300
           +SKS I+  P CLMH+M GRVLPRYRVL+V+KSKRL KK PK I  L M D+DFLDKFV 
Sbjct: 328 VSKSDIVRNPFCLMHAMHGRVLPRYRVLEVLKSKRLTKKLPKLIDSLWMPDEDFLDKFVR 387

Query: 301 RFPDNMKDLLVAFRGNS 318
           RFPDNM DL  AFRGNS
Sbjct: 388 RFPDNMNDLFEAFRGNS 404

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BLAST of Lsi07G001870 vs. TrEMBL
Match: D7SW46_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01450 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 9.2e-92
Identity = 169/310 (54.52%), Postives = 239/310 (77.10%), Query Frame = 1 

Query: 9   STEKPQSVYKYLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGK 68
           STE PQSV  +L +LGFS+AHI++++R+ PQI FS I+KTLKPK++FF+ LGLVG+DLGK
Sbjct: 56  STENPQSVIHFLRDLGFSEAHIRTSVRVGPQILFSDIDKTLKPKVQFFEQLGLVGADLGK 115

Query: 69  FISRHSSLLTVSLEKKLMPSVEILKNVFPKDNCNRDLLCVMRRCSDMVMRSPYKRLSVNI 128
           FIS++S +LT+SLEKKL+P +EILK     D  N DL+ V+RRC+ ++ R+P   LS NI
Sbjct: 116 FISKNSKVLTISLEKKLVPCIEILKKTLSDDENNGDLIRVLRRCTWVLSRNPELLLS-NI 175

Query: 129 NYLQSCGIVDSQLSMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVHGLQAISCV 188
            +L+SCGIV SQLSMLL  QP  F  ++S +KD+VS  V+ GFS +++M V+ L  ISC+
Sbjct: 176 AFLESCGIVGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYALYTISCL 235

Query: 189 SNATFNKKVDLICSFGITEKECMRMFTSAPFLIRTSIDKLKLGLEFFMNEAKLSKSHILG 248
            + T  KK +L  S+G TE+EC+ MF   P L+R S +KLKLG+EFFMN  K  K+ ++ 
Sbjct: 236 RDETLRKKFELFRSWGFTEQECIEMFRRTPGLLRASEEKLKLGMEFFMNTMKFEKTLLVH 295

Query: 249 KPTCLMHSMQGRVLPRYRVLQVVKSKRLLKKQPKFIHILGMSDQDFLDKFVCRFPDNMKD 308
           +PT LM SM+ RV+PRYRVLQ++KSKRLLK++P FI++L ++D++FLDKF+ RF D+ ++
Sbjct: 296 RPTILMLSMEDRVIPRYRVLQILKSKRLLKREPSFINVLSLTDEEFLDKFISRFADDAEE 355

Query: 309 LLVAFRGNSV 319
           LLVA++G+++
Sbjct: 356 LLVAYKGHTL 364

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BLAST of Lsi07G001870 vs. TrEMBL
Match: B9T3X3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0169990 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.5e-89
Identity = 159/319 (49.84%), Postives = 240/319 (75.24%), Query Frame = 1 

Query: 7   VVSTEKPQSVYKYLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLGLVGSDL 66
           + STEKPQSV+ +L  LG S++HIQSAI   PQI F++++K LKPK++ FQ+LGLVG DL
Sbjct: 47  IKSTEKPQSVHYFLKNLGLSNSHIQSAIHGAPQILFANVDKCLKPKVKLFQDLGLVGYDL 106

Query: 67  GKFISRHSSLLTVSLEKKLMPSVEILKNVFPKDNCNRDLLCVMRRCSDMVMRSPYKRLSV 126
           GKFIS++S+LLT SL+KKL P VEILK +   D  N+DL+ V+ RC+ ++ ++P  RL  
Sbjct: 107 GKFISKNSTLLTASLDKKLSPRVEILKRLLLNDENNKDLVKVLTRCNWIISKNPKSRLLS 166

Query: 127 NINYLQSCGIVDSQLSMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVHGLQAIS 186
           N+ +L+SCGIV SQLSMLL+ QP  F  +ES ++D+VS V+  GFS +++M V+ L  +S
Sbjct: 167 NVAFLESCGIVGSQLSMLLRRQPRLFIMQESALRDLVSQVLNMGFSVNSRMLVYALYTVS 226

Query: 187 CVSNATFNKKVDLICSFGITEKECMRMFTSAPFLIRTSIDKLKLGLEFFMNEAKLSKSHI 246
           C+S+ TF KK++++  FG +E EC  MF   P L+R+S  KLKLGL+FF+N  K  +  +
Sbjct: 227 CMSHETFGKKIEILKKFGFSEYECTEMFRKQPGLLRSSEKKLKLGLDFFINTIKFKREVL 286

Query: 247 LGKPTCLMHSMQGRVLPRYRVLQVVKSKRLLKKQPKFIHILGMSDQDFLDKFVCRFPDNM 306
           + +PTCLM SM+ RV+PRY+VL+++K K+LLKKQP FI++L +++++F+ KF+  FPD+ 
Sbjct: 287 VYRPTCLMLSMEERVIPRYKVLEIMKLKKLLKKQPSFINVLNLTEEEFVQKFIASFPDDA 346

Query: 307 KDLLVAFRGNSVGAFQPKE 326
           ++LLVA+R +++ ++  ++
Sbjct: 347 EELLVAYRSHTLDSYSEEK 365

[Close]
BLAST of Lsi07G001870 vs. TrEMBL
Match: M5W835_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015928mg PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 2.4e-84
Identity = 160/299 (53.51%), Postives = 219/299 (73.24%), Query Frame = 1 

Query: 7   VVSTEKPQSVYKYLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLGLVGSDL 66
           V S EKPQSV  +L ELGFSD HI+SA+R  PQI FS+I+KTL+PK+EFFQ LGL  SDL
Sbjct: 74  VTSPEKPQSVRSFLRELGFSDTHIRSAVRGSPQILFSNIDKTLRPKLEFFQQLGLSSSDL 133

Query: 67  GKFISRHSSLLTVSLEKKLMPSVEILKNVFPKDNCNRDLLCVMRRCSDMVMRSPYKRLSV 126
              IS++S+LLTVSLE+KL+P +EILK +   D   +DL+ V+ RC+ +V + P  RL  
Sbjct: 134 ASLISKNSTLLTVSLERKLVPCIEILKKILGNDENAKDLIRVLCRCNWVVRKDPESRLLG 193

Query: 127 NINYLQSCGIVDSQLSMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVHGLQAIS 186
           NI +++SCGIV SQL+MLLK QP  F  +ES ++ +VS V+E GFS +++M VH L  +S
Sbjct: 194 NIAFMESCGIVGSQLTMLLKRQPWLFIVQESVLRSLVSRVLEMGFSLNSRMLVHALYTVS 253

Query: 187 CVSNATFNKKVDLICSFGITEKECMRMFTSAPFLIRTSIDKLKLGLEFFMNEAKLSKSHI 246
           C+ + T ++K+DL+C FG +E ECM MF   P L+RTS +KLKLG++FF+N  K  KS +
Sbjct: 254 CLRSGTISRKLDLLCIFGFSEDECMEMFRRTPGLLRTSEEKLKLGIDFFLNTVKFKKSVL 313

Query: 247 LGKPTCLMHSMQGRVLPRYRVLQVVKSKRLLKKQPKFIHILGMSDQDFLDKFVCRFPDN 306
           +  P  LM SM+ RV+ RYRVL+V+KSKRLLK+ P F   L +++++FLDKF+ RF D+
Sbjct: 314 IHTPWILMFSMENRVIARYRVLEVIKSKRLLKRDPTFYGALVLTEEEFLDKFISRFRDD 372

[Close]
BLAST of Lsi07G001870 vs. TrEMBL
Match: A0A061DJV1_THECC (Mitochondrial transcription termination factor family protein, putative OS=Theobroma cacao GN=TCM_001221 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.4e-79
Identity = 156/322 (48.45%), Postives = 229/322 (71.12%), Query Frame = 1 

Query: 7   VVSTEKPQSVYKYLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLGLVGSDL 66
           V S EKPQ+V  +   +GFS+A I +++R  PQI F+++E  L+PKI+FFQ+LG VG  L
Sbjct: 69  VKSFEKPQAVANFFRNVGFSNAEIAASVRNAPQILFANVETKLRPKIKFFQDLGFVGPHL 128

Query: 67  GKFISRHSSLLTVSLEKKLMPSVEILKNVFPKDNCNRDLLCVMRRCSDMVMRSPYKRLSV 126
           GKF+S +S+LL  SL+KKL+PS +I+K V   +N N+DL+ V  R S  + R    +LS 
Sbjct: 129 GKFLSGNSALLACSLDKKLIPSFQIVKKVLG-NNDNKDLIKVFNRSSGFIARDCILKLSR 188

Query: 127 NINYLQSCGIVDSQLSMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVHGLQAIS 186
           NI YL+SCGIV SQLS LLK QP  F  RES ++D+VS V++ GFSTD++M V+ +  ++
Sbjct: 189 NIGYLESCGIVGSQLSKLLKRQPRIFRMRESALRDLVSRVLDMGFSTDSRMLVYAIHTMN 248

Query: 187 CVSNATFNKKVDLICSFGITEKECMRMFTSAPFLIRTSIDKLKLGLEFFMNEAKLSKSHI 246
           C+S  TF KK +L+ SFG +E E + MF  AP L+RTS +K+KLG+ FF N AK  K+ +
Sbjct: 249 CLSEQTFKKKWELLQSFGFSENERVDMFRKAPGLLRTSEEKMKLGIAFFTNVAKFDKNVL 308

Query: 247 LGKPTCLMHSMQGRVLPRYRVLQVVKSKRLLKKQPKFIHILGMSDQDFLDKFVCRFPDNM 306
           + +P  LM+S++ RV+PRYRVLQ++KSK+LLKK+  F++IL  ++ +FL KF+ RF DN+
Sbjct: 309 VSRPRLLMNSLEDRVIPRYRVLQIIKSKKLLKKELSFLNILDYTENEFL-KFISRFTDNV 368

Query: 307 KDLLVAFRGNSVGAFQPKELTT 329
           ++LL+A++   +   + +E  T
Sbjct: 369 EELLIAYKAYLLHTSEEEEEKT 388

[Close]
BLAST of Lsi07G001870 vs. TAIR10
Match: AT5G64950.1 (AT5G64950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 234.2 bits (596), Expect = 1.2e-61
Identity = 127/313 (40.58%), Postives = 207/313 (66.13%), Query Frame = 1 

Query: 9   STEKPQSVYKYLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGK 68
           S E+P+SV + L    FSD  IQ +IR+ P++ F ++EK L+PK+ FF+++G  GS LGK
Sbjct: 67  SLEQPRSVIQMLKSYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGK 126

Query: 69  FISRHSSLLTVSLEKKLMPSVEILKNVF-PKDNCNRDLLCVMRRCSDMVM-RSPYKRLSV 128
           F+S++SS++ VSL KKL+P+VEILK++  PK   + DL  ++ RC  +++ R P   L  
Sbjct: 127 FVSQNSSVVGVSLVKKLIPTVEILKSIVAPK---HEDLPVILSRCGWLLLSRDPNLFLLP 186

Query: 129 NINYLQSCGIVDSQLSMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVHGLQAIS 188
           NI+YL++CGIV SQL+ LL+ QP  F   E +++  VS  ++ GF+ +++M VH + ++S
Sbjct: 187 NISYLETCGIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLS 246

Query: 189 CVSNATFNKKVDLICSFGITEKECMRMFTSAPFLIRTSIDKLKLGLEFFMNEAKLSKSHI 248
            +S  TF++KV L  + G +E E   +   +P LIR S DKL LG EF++    L +  +
Sbjct: 247 SLSEKTFDRKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREAL 306

Query: 249 LGKPTCLMHSMQGRVLPRYRVLQVVKSKRLL----KKQPKFIHILGMSDQDFLDKFVCRF 308
             +P  L ++++ RV+PR +VLQ+++ K LL    KK+   + I+ M+++ FL+K+V RF
Sbjct: 307 AKRPCVLSYNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRF 366

Query: 309 PDNM-KDLLVAFR 315
            D + ++LLVA++
Sbjct: 367 GDEIAEELLVAYK 376

[Close]
BLAST of Lsi07G001870 vs. TAIR10
Match: AT1G21150.1 (AT1G21150.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 154.1 bits (388), Expect = 1.5e-37
Identity = 90/311 (28.94%), Postives = 157/311 (50.48%), Query Frame = 1 

Query: 7   VVSTEKPQSVYKYLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLGLVGSDL 66
           +VS++KP SV     + GF++  I S I+  P++   S E  + PK+ FF ++G   SD 
Sbjct: 82  LVSSKKPDSVLALFKDHGFTNDQITSVIKSFPRVLSLSPEDVISPKLMFFSSIGFSTSDT 141

Query: 67  GKFISRHSSLLTVSLEKKLMPSVEILKNVFPKDNCNRDLLCVMRRCSDMVMRSPYKRLSV 126
            K IS    +L+ SL K+L+P  + LK++  ++      L    RC  + +      +S+
Sbjct: 142 AKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEESVVKCLKRGIRCFSLKITHC---VSL 201

Query: 127 NINYLQSCGIVDSQLSMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVHGLQAIS 186
            ++  +  G+ D  +  L++  P  F  RE R  ++++ V   GF      FVH + A  
Sbjct: 202 RVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFD 261

Query: 187 CVSNATFNKKVDLICSFGITEKECMRMFTSAPFLIRTSIDKLKLGLEFFMNEAKLSKSHI 246
           C S +   +K  L   FG ++++ +      P  +  S +K+   LE+ +N   L    I
Sbjct: 262 CTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDI 321

Query: 247 LGKPTCLMHSMQGRVLPRYRVLQVVKSKRLLKKQP-KFIHILGMSDQDFLDKFVCRFPDN 306
           + +P  L  SM+ R+ PR +V+ ++ SK L+KK+   +  IL +   +F+DKFV ++ D 
Sbjct: 322 VARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDE 381

Query: 307 MKDLLVAFRGN 317
           M  L+  F  N
Sbjct: 382 MPQLVQPFTSN 389

[Close]
BLAST of Lsi07G001870 vs. TAIR10
Match: AT5G07900.1 (AT5G07900.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 132.5 bits (332), Expect = 4.7e-31
Identity = 83/308 (26.95%), Postives = 155/308 (50.32%), Query Frame = 1 

Query: 9   STEKPQSVYKYLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGK 68
           S E+P +V   L + GF+ A I S ++  P +  ++ E  L PK+ FF ++G+  S L +
Sbjct: 97  SPERPNTVLNLLRDHGFTTAQISSLVKKRPVLLLANAESVLLPKLSFFLSIGVSKSLLAR 156

Query: 69  FISRHSSLLTVSLEKKLMPSVEILKNVFPKDNCNRDLLCVMRRCSDMVMRSPYKRLSVNI 128
            ++   ++LT SL  +L+PS   LK+V   D     ++  +RR + + +    K L  NI
Sbjct: 157 TLASDPTILTRSLVNQLIPSYNFLKSVLDSD---EKIVAALRRTTWVFLEDHTKNLVPNI 216

Query: 129 NYLQSCGIVDSQLSMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVHGLQAISCV 188
           NY+   G+ +  + +LL   P    ++    + I     E GF+     FV  + A+S  
Sbjct: 217 NYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALSGK 276

Query: 189 SN-ATFNKKVDLICSFGITEKECMRMFTSAPFLIRTSIDKLKLGLEFFMNEAKLSKSHIL 248
            N + ++K  ++   +G +E + M  F   P  +  S  K+   +E+F+NE  ++   I 
Sbjct: 277 GNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRSIA 336

Query: 249 GKPTCLMHSMQGRVLPRYRVLQVVKSKRLLKKQPKFIHILGMSDQDFLDKFVCRFPDNMK 308
             P  L  S++ R++PR  V +V+ S  L+K+      +L   ++ FL+K V ++ + + 
Sbjct: 337 QCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKYEEELP 396

Query: 309 DLLVAFRG 316
           +L+  + G
Sbjct: 397 ELMNLYLG 401

[Close]
BLAST of Lsi07G001870 vs. TAIR10
Match: AT1G61970.1 (AT1G61970.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 78.6 bits (192), Expect = 8.1e-15
Identity = 58/225 (25.78%), Postives = 101/225 (44.89%), Query Frame = 1 

Query: 13  PQSVYKYLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGKFISR 72
           P SV   L+  GF+ + I + IR  PQ+  +  EK+L PK++F Q+ G   S++ + +S 
Sbjct: 84  PDSVLNLLTSHGFTGSQISTIIRDYPQLLIADAEKSLGPKLQFLQSRGASSSEITEIVSS 143

Query: 73  HSSLLTVSLEKKLMPSVEILKNVFPKDNCNRDLLCVMRRCSDMVMRSPYKRLSVNINYLQ 132
              +L     K +    + +K+   + +   + LC        + +   +    N++ L+
Sbjct: 144 VPEILGKKGHKTISVYYDFIKDTLLEKSSKNEKLC------HSLPQGNLENKIRNVSVLR 203

Query: 133 SCGIVDSQL-SMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVHGLQAISCVSNA 192
             G+    L S+L+       GK   + ++ +  VVE GF   T  FV  LQ I  ++  
Sbjct: 204 ELGMPHKLLFSLLISDSQPVCGK--EKFEETLKKVVEMGFDPTTSKFVEALQVIYKMNEK 263

Query: 193 TFNKKVDLICSFGITEKECMRMFTSAPFLIRTSIDKLKLGLEFFM 237
           T  +KV L  S G    +    F   P  +R S  K+   +E F+
Sbjct: 264 TIEEKVHLYKSLGFDVGDVWSSFKKWPISLRVSEKKMLDSIETFL 300

[Close]
BLAST of Lsi07G001870 vs. TAIR10
Match: AT3G46950.1 (AT3G46950.1 Mitochondrial transcription termination factor family protein)

HSP 1 Score: 75.5 bits (184), Expect = 6.9e-14
Identity = 60/251 (23.90%), Postives = 115/251 (45.82%), Query Frame = 1 

Query: 13  PQSVYKYLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGKFISR 72
           P SV   L   GF D+ I   IR  P++  +  EK+L+PK++F ++ G   S++ + +S 
Sbjct: 84  PDSVLNLLRSNGFKDSQISRIIRAYPRLLVTDAEKSLRPKLQFLKSRGASSSEVIEIVSN 143

Query: 73  HSSLLTVSLEKKLMPSVEILKNVFPKDNCNRDLLCVMRRCSDMVMRSPYKRLSVNINYLQ 132
             ++L    E+ +    + +K++  +D  +  + C   +  + +          NI+ L+
Sbjct: 144 VPTILDKKGEESVSLYYDFVKDIM-QDGKSLCISCPEGKKGNRIR---------NISVLR 203

Query: 133 SCGIVDSQL-SMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVHGLQAISCVSNA 192
             G+    L S+L+       GK   + ++ +  VV+ GF      FV  L  +  +S  
Sbjct: 204 ELGVPQKLLFSLLISRYQPVCGK--EKFEESLKKVVDMGFDPAKSKFVEALHVVYEMSEK 263

Query: 193 TFNKKVDLICSFGITEKECMRMFTSAPFLIRTSIDKLKLGLEFFMNEAKLSKSHIL---- 252
           T  +KV++    G +E E   +F   P+ ++ S  K+ L  E  + +  L +  I+    
Sbjct: 264 TIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFE-TLKKCGLVEEEIISVLK 321

Query: 253 GKPTCLMHSMQ 259
            +P C+  S Q
Sbjct: 324 SRPQCIRSSEQ 321

[Close]
BLAST of Lsi07G001870 vs. NCBI nr
Match: gi|659107586|ref|XP_008453750.1| (PREDICTED: uncharacterized protein LOC103494394 [Cucumis melo])

HSP 1 Score: 455.7 bits (1171), Expect = 6.9e-125
Identity = 230/328 (70.12%), Postives = 273/328 (83.23%), Query Frame = 1 

Query: 1   MSCRKGVVSTEKPQSVYKYLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLG 60
           M+ R+G+ STEKP+SVYKYLSELG SD  I+SAIR  PQ+AF+SI+KTLKPKIEFFQNLG
Sbjct: 77  MANRRGLKSTEKPRSVYKYLSELGLSDTQIKSAIRNTPQLAFTSIDKTLKPKIEFFQNLG 136

Query: 61  LVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVFPKDNCNRDLLCVMRRCSDMVMRSP 120
           LVGS L KFIS++S +L+ SLEK LMP++EILKNV  KD CN  L  V+RRCS ++MRSP
Sbjct: 137 LVGSHLSKFISKNSKVLSCSLEKTLMPNIEILKNVLAKDKCNAGLPTVLRRCSGILMRSP 196

Query: 121 YKRLSVNINYLQSCGIVDSQLSMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVH 180
            K LSVNI+YL+SCG+VD QL MLLK QPA    RESR+KD VSM ++ GFS +++MF+H
Sbjct: 197 DKVLSVNISYLRSCGVVDYQLPMLLKRQPALLITRESRLKDFVSMAIKAGFSINSRMFIH 256

Query: 181 GLQAISCVSNATFNKKVDLICSFGITEKECMRMFTSAPFLIRTSIDKLKLGLEFFMNEAK 240
           GL +IS +SNATF KKV+LICSFGITEKECMRMF SAP L+RTSIDKL++GLEFFMNEAK
Sbjct: 257 GLLSISSISNATFKKKVELICSFGITEKECMRMFNSAPVLMRTSIDKLEVGLEFFMNEAK 316

Query: 241 LSKSHILGKPTCLMHSMQGRVLPRYRVLQVVKSKRLLKKQPKFIHILGMSDQDFLDKFVC 300
           +SKS I+ KP+CLMH+M  RVLPRYRVL+V+KSKRL KK PK I+ L  SD+DFLD +V 
Sbjct: 317 VSKSEIVRKPSCLMHAMHERVLPRYRVLEVLKSKRLTKKLPKLINSLWKSDEDFLDIYVR 376

Query: 301 RFPDNMKDLLVAFRGNSVGAFQPKELTT 329
           RFPDNM DL  AFRGNSVGA QP+EL T
Sbjct: 377 RFPDNMDDLFEAFRGNSVGALQPEELAT 404

[Close]
BLAST of Lsi07G001870 vs. NCBI nr
Match: gi|449462880|ref|XP_004149163.1| (PREDICTED: uncharacterized protein LOC101214031 [Cucumis sativus])

HSP 1 Score: 447.6 bits (1150), Expect = 1.9e-122
Identity = 227/317 (71.61%), Postives = 258/317 (81.39%), Query Frame = 1 

Query: 1   MSCRKGVVSTEKPQSVYKYLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLG 60
           M+ R+G+ STEKP+SVYKYLS+LG SD  I+SA+R+ PQIAFSSIEKTLKPKIEF QNLG
Sbjct: 1   MATRRGIQSTEKPRSVYKYLSDLGLSDTQIKSAVRITPQIAFSSIEKTLKPKIEFLQNLG 60

Query: 61  LVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVFPKDNCNRDLLCVMRRCSDMVMRSP 120
            VGSDL KFISR S   + SLEK LMP+VEILKNV PK  CN DL  V+RRCSD++ RSP
Sbjct: 61  FVGSDLSKFISRQSKFFSSSLEKTLMPNVEILKNVLPKGTCNDDLPKVLRRCSDVLTRSP 120

Query: 121 YKRLSVNINYLQSCGIVDSQLSMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVH 180
           YK LSVNINYL+SCGIVD QLS LLK QPA F   ESR+KD VSM V+ GFS +  MF+H
Sbjct: 121 YKVLSVNINYLRSCGIVDYQLSTLLKRQPALFIMHESRLKDFVSMAVKAGFSPNGTMFIH 180

Query: 181 GLQAISCVSNATFNKKVDLICSFGITEKECMRMFTSAPFLIRTSIDKLKLGLEFFMNEAK 240
           GL +IS +SNAT+ KKV LICSFGITEKECMRMF SAP L+RTS+ KL++GLEFFMNEAK
Sbjct: 181 GLHSISSISNATYKKKVKLICSFGITEKECMRMFNSAPVLMRTSVGKLEVGLEFFMNEAK 240

Query: 241 LSKSHILGKPTCLMHSMQGRVLPRYRVLQVVKSKRLLKKQPKFIHILGMSDQDFLDKFVC 300
           +SKS I+  P CLMH+M GRVLPRYRVL+V+KSKRL KK PK I  L M D+DFLDKFV 
Sbjct: 241 VSKSDIVRNPFCLMHAMHGRVLPRYRVLEVLKSKRLTKKLPKLIDSLWMPDEDFLDKFVR 300

Query: 301 RFPDNMKDLLVAFRGNS 318
           RFPDNM DL  AFRGNS
Sbjct: 301 RFPDNMNDLFEAFRGNS 317

[Close]
BLAST of Lsi07G001870 vs. NCBI nr
Match: gi|700198082|gb|KGN53240.1| (hypothetical protein Csa_4G036600 [Cucumis sativus])

HSP 1 Score: 447.6 bits (1150), Expect = 1.9e-122
Identity = 227/317 (71.61%), Postives = 258/317 (81.39%), Query Frame = 1 

Query: 1   MSCRKGVVSTEKPQSVYKYLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLG 60
           M+ R+G+ STEKP+SVYKYLS+LG SD  I+SA+R+ PQIAFSSIEKTLKPKIEF QNLG
Sbjct: 88  MATRRGIQSTEKPRSVYKYLSDLGLSDTQIKSAVRITPQIAFSSIEKTLKPKIEFLQNLG 147

Query: 61  LVGSDLGKFISRHSSLLTVSLEKKLMPSVEILKNVFPKDNCNRDLLCVMRRCSDMVMRSP 120
            VGSDL KFISR S   + SLEK LMP+VEILKNV PK  CN DL  V+RRCSD++ RSP
Sbjct: 148 FVGSDLSKFISRQSKFFSSSLEKTLMPNVEILKNVLPKGTCNDDLPKVLRRCSDVLTRSP 207

Query: 121 YKRLSVNINYLQSCGIVDSQLSMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVH 180
           YK LSVNINYL+SCGIVD QLS LLK QPA F   ESR+KD VSM V+ GFS +  MF+H
Sbjct: 208 YKVLSVNINYLRSCGIVDYQLSTLLKRQPALFIMHESRLKDFVSMAVKAGFSPNGTMFIH 267

Query: 181 GLQAISCVSNATFNKKVDLICSFGITEKECMRMFTSAPFLIRTSIDKLKLGLEFFMNEAK 240
           GL +IS +SNAT+ KKV LICSFGITEKECMRMF SAP L+RTS+ KL++GLEFFMNEAK
Sbjct: 268 GLHSISSISNATYKKKVKLICSFGITEKECMRMFNSAPVLMRTSVGKLEVGLEFFMNEAK 327

Query: 241 LSKSHILGKPTCLMHSMQGRVLPRYRVLQVVKSKRLLKKQPKFIHILGMSDQDFLDKFVC 300
           +SKS I+  P CLMH+M GRVLPRYRVL+V+KSKRL KK PK I  L M D+DFLDKFV 
Sbjct: 328 VSKSDIVRNPFCLMHAMHGRVLPRYRVLEVLKSKRLTKKLPKLIDSLWMPDEDFLDKFVR 387

Query: 301 RFPDNMKDLLVAFRGNS 318
           RFPDNM DL  AFRGNS
Sbjct: 388 RFPDNMNDLFEAFRGNS 404

[Close]
BLAST of Lsi07G001870 vs. NCBI nr
Match: gi|296082490|emb|CBI21495.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 345.1 bits (884), Expect = 1.3e-91
Identity = 169/310 (54.52%), Postives = 239/310 (77.10%), Query Frame = 1 

Query: 9   STEKPQSVYKYLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGK 68
           STE PQSV  +L +LGFS+AHI++++R+ PQI FS I+KTLKPK++FF+ LGLVG+DLGK
Sbjct: 56  STENPQSVIHFLRDLGFSEAHIRTSVRVGPQILFSDIDKTLKPKVQFFEQLGLVGADLGK 115

Query: 69  FISRHSSLLTVSLEKKLMPSVEILKNVFPKDNCNRDLLCVMRRCSDMVMRSPYKRLSVNI 128
           FIS++S +LT+SLEKKL+P +EILK     D  N DL+ V+RRC+ ++ R+P   LS NI
Sbjct: 116 FISKNSKVLTISLEKKLVPCIEILKKTLSDDENNGDLIRVLRRCTWVLSRNPELLLS-NI 175

Query: 129 NYLQSCGIVDSQLSMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVHGLQAISCV 188
            +L+SCGIV SQLSMLL  QP  F  ++S +KD+VS  V+ GFS +++M V+ L  ISC+
Sbjct: 176 AFLESCGIVGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYALYTISCL 235

Query: 189 SNATFNKKVDLICSFGITEKECMRMFTSAPFLIRTSIDKLKLGLEFFMNEAKLSKSHILG 248
            + T  KK +L  S+G TE+EC+ MF   P L+R S +KLKLG+EFFMN  K  K+ ++ 
Sbjct: 236 RDETLRKKFELFRSWGFTEQECIEMFRRTPGLLRASEEKLKLGMEFFMNTMKFEKTLLVH 295

Query: 249 KPTCLMHSMQGRVLPRYRVLQVVKSKRLLKKQPKFIHILGMSDQDFLDKFVCRFPDNMKD 308
           +PT LM SM+ RV+PRYRVLQ++KSKRLLK++P FI++L ++D++FLDKF+ RF D+ ++
Sbjct: 296 RPTILMLSMEDRVIPRYRVLQILKSKRLLKREPSFINVLSLTDEEFLDKFISRFADDAEE 355

Query: 309 LLVAFRGNSV 319
           LLVA++G+++
Sbjct: 356 LLVAYKGHTL 364

[Close]
BLAST of Lsi07G001870 vs. NCBI nr
Match: gi|731397370|ref|XP_002276330.2| (PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera])

HSP 1 Score: 345.1 bits (884), Expect = 1.3e-91
Identity = 169/310 (54.52%), Postives = 239/310 (77.10%), Query Frame = 1 

Query: 9   STEKPQSVYKYLSELGFSDAHIQSAIRLVPQIAFSSIEKTLKPKIEFFQNLGLVGSDLGK 68
           STE PQSV  +L +LGFS+AHI++++R+ PQI FS I+KTLKPK++FF+ LGLVG+DLGK
Sbjct: 77  STENPQSVIHFLRDLGFSEAHIRTSVRVGPQILFSDIDKTLKPKVQFFEQLGLVGADLGK 136

Query: 69  FISRHSSLLTVSLEKKLMPSVEILKNVFPKDNCNRDLLCVMRRCSDMVMRSPYKRLSVNI 128
           FIS++S +LT+SLEKKL+P +EILK     D  N DL+ V+RRC+ ++ R+P   LS NI
Sbjct: 137 FISKNSKVLTISLEKKLVPCIEILKKTLSDDENNGDLIRVLRRCTWVLSRNPELLLS-NI 196

Query: 129 NYLQSCGIVDSQLSMLLKMQPAFFGKRESRVKDIVSMVVETGFSTDTKMFVHGLQAISCV 188
            +L+SCGIV SQLSMLL  QP  F  ++S +KD+VS  V+ GFS +++M V+ L  ISC+
Sbjct: 197 AFLESCGIVGSQLSMLLTRQPRLFVIKQSTLKDLVSRAVDMGFSIESRMLVYALYTISCL 256

Query: 189 SNATFNKKVDLICSFGITEKECMRMFTSAPFLIRTSIDKLKLGLEFFMNEAKLSKSHILG 248
            + T  KK +L  S+G TE+EC+ MF   P L+R S +KLKLG+EFFMN  K  K+ ++ 
Sbjct: 257 RDETLRKKFELFRSWGFTEQECIEMFRRTPGLLRASEEKLKLGMEFFMNTMKFEKTLLVH 316

Query: 249 KPTCLMHSMQGRVLPRYRVLQVVKSKRLLKKQPKFIHILGMSDQDFLDKFVCRFPDNMKD 308
           +PT LM SM+ RV+PRYRVLQ++KSKRLLK++P FI++L ++D++FLDKF+ RF D+ ++
Sbjct: 317 RPTILMLSMEDRVIPRYRVLQILKSKRLLKREPSFINVLSLTDEEFLDKFISRFADDAEE 376

Query: 309 LLVAFRGNSV 319
           LLVA++G+++
Sbjct: 377 LLVAYKGHTL 385

The following BLAST results are available for this feature:
BLAST of Lsi07G001870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MTEF9_ARATH2.9e-0622.74Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana G... [more]
BLAST of Lsi07G001870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUB9_CUCSA1.3e-12271.61Uncharacterized protein OS=Cucumis sativus GN=Csa_4G036600 PE=4 SV=1[more]
D7SW46_VITVI9.2e-9254.52Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g01450 PE=4 SV=... [more]
B9T3X3_RICCO1.5e-8949.84Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0169990 PE=4 SV=1[more]
M5W835_PRUPE2.4e-8453.51Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015928mg PE=4 S... [more]
A0A061DJV1_THECC1.4e-7948.45Mitochondrial transcription termination factor family protein, putative OS=Theob... [more]
BLAST of Lsi07G001870 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G64950.11.2e-6140.58 Mitochondrial transcription termination factor family protein[more]
AT1G21150.11.5e-3728.94 Mitochondrial transcription termination factor family protein[more]
AT5G07900.14.7e-3126.95 Mitochondrial transcription termination factor family protein[more]
AT1G61970.18.1e-1525.78 Mitochondrial transcription termination factor family protein[more]
AT3G46950.16.9e-1423.90 Mitochondrial transcription termination factor family protein[more]
BLAST of Lsi07G001870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659107586|ref|XP_008453750.1|6.9e-12570.12PREDICTED: uncharacterized protein LOC103494394 [Cucumis melo][more]
gi|449462880|ref|XP_004149163.1|1.9e-12271.61PREDICTED: uncharacterized protein LOC101214031 [Cucumis sativus][more]
gi|700198082|gb|KGN53240.1|1.9e-12271.61hypothetical protein Csa_4G036600 [Cucumis sativus][more]
gi|296082490|emb|CBI21495.3|1.3e-9154.52unnamed protein product [Vitis vinifera][more]
gi|731397370|ref|XP_002276330.2|1.3e-9154.52PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR003690MTERF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi07G001870.1Lsi07G001870.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 187..295
score: 5.7E-15coord: 18..97
score: 5.1E-12coord: 106..199
score: 1.
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 211..242
score: 29.0coord: 142..172
score: 19.0coord: 244..274
score: 2100.0coord: 106..137
score: 140.0coord: 67..99
score: 2.5coord: 31..62
score: 0
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 9..315
score: 6.8E