Lsi07G000860 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAAAGCTATAAAGGTTGTGGCTTTGGCATTGGTCTTGATGGTTGTGATTGGTTTTGGTGAAGCTCAAACCATTTGCAACATGCCAGTTGCTGGTTTGTATGCATGTAGACCGTCGGTGACACCTCCGAACCCGACACCCCCGACCGCTCAATGTTGCATGGCGCTCTCGCACGCCGACTTGCACTGCTTTTGCACTTACCGGAACTCGGGAGCTCTTTCTTCTCTTGGCATTGACCCTAATCTTGCAATGCAGTTACCTAAGATCTGCAAGCTTCCTAACTCTCCAAATTGCTAG ATGGATAAAGCTATAAAGGTTGTGGCTTTGGCATTGGTCTTGATGGTTGTGATTGGTTTTGGTGAAGCTCAAACCATTTGCAACATGCCAGTTGCTGGTTTGTATGCATGTAGACCGTCGGTGACACCTCCGAACCCGACACCCCCGACCGCTCAATGTTGCATGGCGCTCTCGCACGCCGACTTGCACTGCTTTTGCACTTACCGGAACTCGGGAGCTCTTTCTTCTCTTGGCATTGACCCTAATCTTGCAATGCAGTTACCTAAGATCTGCAAGCTTCCTAACTCTCCAAATTGCTAG ATGGATAAAGCTATAAAGGTTGTGGCTTTGGCATTGGTCTTGATGGTTGTGATTGGTTTTGGTGAAGCTCAAACCATTTGCAACATGCCAGTTGCTGGTTTGTATGCATGTAGACCGTCGGTGACACCTCCGAACCCGACACCCCCGACCGCTCAATGTTGCATGGCGCTCTCGCACGCCGACTTGCACTGCTTTTGCACTTACCGGAACTCGGGAGCTCTTTCTTCTCTTGGCATTGACCCTAATCTTGCAATGCAGTTACCTAAGATCTGCAAGCTTCCTAACTCTCCAAATTGCTAG MDKAIKVVALALVLMVVIGFGEAQTICNMPVAGLYACRPSVTPPNPTPPTAQCCMALSHADLHCFCTYRNSGALSSLGIDPNLAMQLPKICKLPNSPNC
BLAST of Lsi07G000860 vs. Swiss-Prot
Match: DIRL1_ARATH (Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana GN=DIR1 PE=1 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.1e-16 Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 1
BLAST of Lsi07G000860 vs. TrEMBL
Match: A0A0A0KZ41_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G017140 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 2.5e-40 Identity = 83/101 (82.18%), Postives = 90/101 (89.11%), Query Frame = 1
BLAST of Lsi07G000860 vs. TrEMBL
Match: A0A0A1IXE5_CUCSA (Lipid binding/ Lipid transporter protein OS=Cucumis sativus GN=LBP PE=2 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 7.2e-40 Identity = 82/101 (81.19%), Postives = 90/101 (89.11%), Query Frame = 1
BLAST of Lsi07G000860 vs. TrEMBL
Match: A0A0D2VM18_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G140600 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 2.8e-28 Identity = 58/97 (59.79%), Postives = 77/97 (79.38%), Query Frame = 1
BLAST of Lsi07G000860 vs. TrEMBL
Match: A0A0D2USW2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G140500 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 1.8e-27 Identity = 56/97 (57.73%), Postives = 77/97 (79.38%), Query Frame = 1
BLAST of Lsi07G000860 vs. TrEMBL
Match: D7U9P1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0062g01260 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 3.5e-26 Identity = 56/98 (57.14%), Postives = 73/98 (74.49%), Query Frame = 1
BLAST of Lsi07G000860 vs. TAIR10
Match: AT5G48485.1 (AT5G48485.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 84.7 bits (208), Expect = 3.4e-17 Identity = 40/96 (41.67%), Postives = 58/96 (60.42%), Query Frame = 1
BLAST of Lsi07G000860 vs. TAIR10
Match: AT5G48490.1 (AT5G48490.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 84.0 bits (206), Expect = 5.8e-17 Identity = 45/98 (45.92%), Postives = 57/98 (58.16%), Query Frame = 1
BLAST of Lsi07G000860 vs. TAIR10
Match: AT5G55450.1 (AT5G55450.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 60.8 bits (146), Expect = 5.3e-10 Identity = 39/93 (41.94%), Postives = 50/93 (53.76%), Query Frame = 1
BLAST of Lsi07G000860 vs. TAIR10
Match: AT5G55410.2 (AT5G55410.2 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein) HSP 1 Score: 51.6 bits (122), Expect = 3.2e-07 Identity = 26/89 (29.21%), Postives = 45/89 (50.56%), Query Frame = 1
BLAST of Lsi07G000860 vs. NCBI nr
Match: gi|700197968|gb|KGN53126.1| (hypothetical protein Csa_4G017140 [Cucumis sativus]) HSP 1 Score: 172.6 bits (436), Expect = 3.5e-40 Identity = 83/101 (82.18%), Postives = 90/101 (89.11%), Query Frame = 1
BLAST of Lsi07G000860 vs. NCBI nr
Match: gi|659107927|ref|XP_008453924.1| (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo]) HSP 1 Score: 172.6 bits (436), Expect = 3.5e-40 Identity = 84/101 (83.17%), Postives = 89/101 (88.12%), Query Frame = 1
BLAST of Lsi07G000860 vs. NCBI nr
Match: gi|821595415|ref|NP_001295798.1| (lipopolysaccharide-binding protein precursor [Cucumis sativus]) HSP 1 Score: 171.0 bits (432), Expect = 1.0e-39 Identity = 82/101 (81.19%), Postives = 90/101 (89.11%), Query Frame = 1
BLAST of Lsi07G000860 vs. NCBI nr
Match: gi|823250126|ref|XP_012457661.1| (PREDICTED: putative lipid-transfer protein DIR1 [Gossypium raimondii]) HSP 1 Score: 132.5 bits (332), Expect = 4.1e-28 Identity = 58/97 (59.79%), Postives = 77/97 (79.38%), Query Frame = 1
BLAST of Lsi07G000860 vs. NCBI nr
Match: gi|823242124|ref|XP_012453760.1| (PREDICTED: putative lipid-transfer protein DIR1 [Gossypium raimondii]) HSP 1 Score: 129.8 bits (325), Expect = 2.6e-27 Identity = 56/97 (57.73%), Postives = 77/97 (79.38%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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