Lsi06G016400 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi06G016400
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr06 : 26691349 .. 26696145 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTCAACTTTACGAAACCAAAATCAAAGTCTCTGTAAATGCTCCATTTGGGGATCTCTTGGGTGAATGCGGATAAGTGGCTCCCTGCTCCACCAACCACTACGTGGATTGTGCCATTCATAGTGCCTGAATATTGCGTTTTTTCTGCATTCACGCATTGATTCTACACCACCACCATACAAATATTATGTTAATCAACAAAAGATATAAAATTTAGATACACTAAATTAGATAAGATACGTAAAAATTGTAAGAGCTTATTTGAGAGTGATTTTAAAATTGTTAAAATTACTCAGAAGCATACTTTAATCACTCAATTAATTTAATTTTTTATTTAAACTTTTAAATGCAATGTTCAATCAAAAATTAGTTTTGAAGGATTAAAAACACATTTTACGGTAATTTTGAAAATGATAAAAGTGATTTTAACCATTTTAAAATCACTCCCAAACATTCTCAAAAAGGCCCTAACTCATCACCTATCTAAAAATCTATATGTTGTCCAAATCTTACCACAATTTAAAAATAACAAGGTTAAAATACTATTTTGCACTTTTTTTTCCGTCAATTTTAAATGTCCAATTTTAGTATACTTTTAATAAATCTTAAATTTTGAAGTTTAAGAGGAGTTACATTTATTTTTTTTAGTTTCCTTTTTCTGAAAATTGTATTTTCATTTATTAACATTTTTGTTTCTCTTGGGGAGATTACTTTCAGAATCCTTTTAGAAATCATGGTGAAAATTTTAAATCCAGTACTCAAATTTTGTTCTTATATTTGGAAATTGTATAATATTTTCTAGTGGTTTTAAAAAAGAAACCATTGATATGATAAGATATTGATTCTGAAATTGTTAAAATTAATTTTGTCATTTTCAAAATTGACATGATAAATATGTTATAAACAAACATTGAATTGATTTAGAGTGATCAAAAGTGTGTTTCGAGGTGATTTAAACAAAAAAAAAATGATTTTAACCAATTCAAAATCATTCTAAAACATCACCTACTCAGATCTAATTTTTTAGGTTTTAAAAAAAAATTGAGCCGGATTGAAAAACATTAATAAAAATAGATTAGGAAAAGTGACTTACCTGATAAACTGGACATGTTCTTTCGTAGTTATGGACATGGCCATAGAAGGCAATATCGACCCTATACTTCTGCCAGAGTTTCTGAAGGCTTTCCCTTCCCATGGGTTCCTCGAATGAGCCCTGCGAAGCATACCAATCGTTGGAAGAGTAGCCGAGCACACGATGAGCAGCAAATATCAACCAAGGTTGTTTTTGTCTATCCGCTGATGCAAGGCATTGCTCTATGAATCTGTACTGTTCTGAGCCCTCTCGCCAGTCATGTTCAGTGTCAACTATACAGAACCGGAACAATCCATAATCTGTCGAATACCTGATACCATAATTCAACAATGAAATGTTTCACAAATTGTATCAGATATTTAAAAAGAAAATGCTGATATCTTTCAGCATGATAGTTCTATGAATAGTGCTGAAATTGTCTGTTTTTTAAGTGTTGAAACTGTCTATTCAACAGACATATCATTTATTTCTTTGATTGTAGTCTTTATTTGTATCAAGAAATGTCGGGTAGCATTATAGTTAGATCCTGTTTGTCTTTTGGAACAGACAATTTAATAAATTAATTAACCCGATTGGATAATTAATTGCCACTATTCATCGATCCGCCTTATGCAGTTTGACTTCTGAATACACTAACTAAAGACGGCAGGGGATTATTTTAGTAATAATCTAAAATAAATAGGAATGGGATCCTCCAATAAAACAAGTGCGGCTTAAATACTTATTGGTCCTATTTTGGTTCATTTTAGTCGTCGTACTATCACAATGTTAATTTTGGTCTTTATACTTTTAACTTTGATTCATTTTGGTTTTTGTACTTTCAACATTTTGGTTCTTATACTTTTAAAAAGTGATCATTTTGGGTTCATTCATTTTCATTTTTATTTCATTTTTAAGGGATCAAAATGATCACTTTTCGAAAGTTTAAAGACCAAAATAAACCAAAGTTGAAAGTACGAGGACCAAAATGAACATTTTAAAAGTATAGAGATCCAAATGTACCAAAGTCGTAAGTATAGGAACTAAAATGAACATTTTGAAAATATAGAGACCAAAATGAACTAAAACCAAAAGTAAAGGAAACAAAGTAGTATTTAAACCAAAAAGTGCACAGTTAATTTGTGAAGCAACTTATAAAACTCAGCATTGCAACAGATTCATGAAATTGTTTAAAAGAATTCTTGGCTTACCAGAACTTTGCTCTGTTTTCAGCAGGAAAATAGAACATGGTCTCCGCCGGAACTCCACATTCCCCACCTGAATCCATGTTTGCATAGAAGGACCCAGAATTTGGCCAGTCACGCTCATGGTTACCACTGCAGGAGTGAAATTGGAGAGCCTTTAAGATTTATATAAGTAAATGGTCCAAAAATATCATACTCTAAGAATCAATCGAGTTATTGATATTGATAACCTTGCAACCATGTAGGGGACCCTAGATGCAATGGGCTCCACCTGTGCAGTAAATTGGTCCCACTCTGAGAGATACCCATTTGCATAAGATAGGTCTCCGATATGGAAAATAATGTCAATATTGTCCAAGTCTTTGATGAGCTGATCGGTGGTGTTCAATGCTCCAGGCTGATAGTTGCTATATTCATTTGAGCCATCACGTTGTCCCTGAAAGTCATGGTTAGTGTTACAAATCTTTTTCCAGAGCCTTGTTTGAAAAAGTTTATCTTCATGAGATTGCCATTTACCACAAGCAGAAAGTGAGCAACTCAGAAAATATTCGATATGGAAAGGGCTGCATTTGAATTCTAAGTTCTTATCAAGTTTGGATGATTAAGTTATATCTTGTTACAGTTACTAAAGAAACACTGGCTACTGAAATGGCAGAACAGTGAAGGATTAGGTTGTTCCTTTTCCAAAAATCATTTGTATGACAACCAATTTTCTTTGAATTAATCAAAATGTTAACTGCCCCTCAAGGAGCTCAAATGTGAAGGCAATTGTAGAAGATCCTCTCAGGAAGATATAGATATATGAAGTCAATACAAGAAATTTAAATAGACCACGAAGAGGTGGCTAAATTAAGTTAATTAACTGAAGTTCAGAAGTATCATTTTTGTTTAATTTCGATATTTCCTTCTGAATTATAAACCTCATTCTCATTTTGGTTATAATCAATGTAATATAAAAATTTTATGGTACCTTCCCCATATCACCAAATATAATGACACGCTGTGATGATTCTTCTCCAGGATGCGGTGATGACTTGAATGAATAGCTTTTGCTCCAAATATATGATCCACTAAGCAAGCGATGACCCATTCTGTACGTATACCTGTTTAAACCAACGTGAGAATCCTTAGTGCAAATGAACAAGATTTTAATAGTGGTTCAGACCAATAGCTTCAACCATTGATACATACACAGTGTTTGGCCATAAGTTCTGTAGGAAACTCGTATGAAAGAAACCAGGATCACGCCAACCAACAGTTCGTGCAGGTGCATCTTTAATCAAAGAAAATAGCATCATGCAACAAGTCAAACATTCGAAACCAGTGTTCAGCCGGAATAAAAGAGTAAACATAATACGATTTGCAGAGTAATTATCTCAAGATTAGAATCGAAGAAAGTCATCAATCCATTCTGGAAGAAGTCTTAACTACCTTTCTAAAAGAATTGTAGATATTCATTATCCTGACGAGACTATGAAAGAAAGACATTGGTAGTGTTCTAAGAAGCCACTTGGATGGAATTGACAACTCATTTCCAGGTTAATAGCCAAAAGCTCAGGACACCAAGATGAGAGAATGGAAATTTTACGAGTTGACTAATATAAGGCATAGCCTCTGTTTTTAAGTATATTACTAATTAAAGAACGGAAGCAGCAAAACTTCAACAAGGCAGCGACATAAATACCTAGAGTGGCCAAGAGATAGGTGATCTATATGATCCAAAACTAATTCTCCAATGAATTTGTGGTTAGTTGCAATTGTTTGGTATTAAAAATCAACTAGACGCAAATTGCAAGTGAAACGTAAATGCAACACACACACGCAAGTTATTAGTTGAACCTTTTTGAAACAGTATTCTAATTGAGGTTTAAGAAAATGTCTGAAAAGTTTCAACAGACATCTTGGTATTTTTTATTTATTTTTTTGTTTCAAGATAATATTAAGTTGTTAACTTAGATGGTGCAGTCTAGCTGACGAGTTGCTCGAATGAATCATACCACACATGCTGTTCCTACTAAATGTCAGTGTGCCAGCTGGGGATCTCGTCTGTGTCTCCCCTTCTAGACCCCATTCAACAAATGGAGTAGCTTCACTTATATCGTACCCGCTTGTCCAGGTTACTGTCATCTGCAAAAATCAAAAGACCATCGTTCTGCTACTAAGCTACTTAAATCTTGCTAACAACTACAGAATATGTAACTTTCTTCTCAAGTATGTTGGCAGCAAATAGGAGTTACAGTTTGAAGACATCTTTTAACGTAAGTTAGCAACGAATATCCAATTGAATGAAGTTTTCGTTACAGTTTCAACAATAACTAAAGAATCACGGTGATGTGGATTAGAAAGGAACAAGAAGTTTTCAAACTGCAGGCCATTATTGACTTTTTTTGTGTCCTCTATCAAAAGTTTCCCACAATAAAATGAAAGGAAATATCAGGATATTGATCAACTTACTTCATTCCACAGTTTGCCATGTGCAAGGCGAGGAAACAATGGTGCTTTAGGATTCTTAAATGA

mRNA sequence

ATGATTTATGGACATGGCCATAGAAGGCAATATCGACCCTATACTTCTGCCAGAGTTTCTGAAGGCTTTCCCTTCCCATGGGTTCCTCGAATGAGCCCTGCGAAGCATACCAATCGTTGGAAGAGTAGCCGAGCACACGATGAGCAGCAAATATCAACCAAGAACGGAAGCAGCAAAACTTCAACAAGGCAGCGACATAAATACCTAGAGTGGCCAAGAGATAGTGTGCCAGCTGGGGATCTCGTCTGTGTCTCCCCTTCTAGACCCCATTCAACAAATGGAGTAGCTTCACTTATATCGTACCCGCTTGTCCAGTTTGCCATGTGCAAGGCGAGGAAACAATGGTGCTTTAGGATTCTTAAATGA

Coding sequence (CDS)

ATGATTTATGGACATGGCCATAGAAGGCAATATCGACCCTATACTTCTGCCAGAGTTTCTGAAGGCTTTCCCTTCCCATGGGTTCCTCGAATGAGCCCTGCGAAGCATACCAATCGTTGGAAGAGTAGCCGAGCACACGATGAGCAGCAAATATCAACCAAGAACGGAAGCAGCAAAACTTCAACAAGGCAGCGACATAAATACCTAGAGTGGCCAAGAGATAGTGTGCCAGCTGGGGATCTCGTCTGTGTCTCCCCTTCTAGACCCCATTCAACAAATGGAGTAGCTTCACTTATATCGTACCCGCTTGTCCAGTTTGCCATGTGCAAGGCGAGGAAACAATGGTGCTTTAGGATTCTTAAATGA

Protein sequence

MIYGHGHRRQYRPYTSARVSEGFPFPWVPRMSPAKHTNRWKSSRAHDEQQISTKNGSSKTSTRQRHKYLEWPRDSVPAGDLVCVSPSRPHSTNGVASLISYPLVQFAMCKARKQWCFRILK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G016400.1Lsi06G016400.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi06G016400Melon (DHL92) v3.6.1lsimedB414
Lsi06G016400Melon (DHL92) v3.6.1lsimedB419
Lsi06G016400Silver-seed gourdcarlsiB331
Lsi06G016400Silver-seed gourdcarlsiB397
Lsi06G016400Silver-seed gourdcarlsiB955
Lsi06G016400Cucumber (Chinese Long) v3cuclsiB077
Lsi06G016400Cucumber (Chinese Long) v3cuclsiB081
Lsi06G016400Cucumber (Chinese Long) v3cuclsiB247
Lsi06G016400Watermelon (97103) v2lsiwmbB364
Lsi06G016400Watermelon (97103) v2lsiwmbB371
Lsi06G016400Watermelon (97103) v2lsiwmbB374
Lsi06G016400Wax gourdlsiwgoB483
Lsi06G016400Wax gourdlsiwgoB491
Lsi06G016400Wax gourdlsiwgoB515
Lsi06G016400Wax gourdlsiwgoB525
Lsi06G016400Wax gourdlsiwgoB526
Lsi06G016400Bottle gourd (USVL1VR-Ls)lsilsiB111
Lsi06G016400Cucumber (Gy14) v1cgylsiB250
Lsi06G016400Cucurbita maxima (Rimu)cmalsiB072
Lsi06G016400Cucurbita maxima (Rimu)cmalsiB135
Lsi06G016400Cucurbita maxima (Rimu)cmalsiB144
Lsi06G016400Cucurbita maxima (Rimu)cmalsiB219
Lsi06G016400Cucurbita maxima (Rimu)cmalsiB251
Lsi06G016400Cucurbita moschata (Rifu)cmolsiB058
Lsi06G016400Cucurbita moschata (Rifu)cmolsiB128
Lsi06G016400Cucurbita moschata (Rifu)cmolsiB133
Lsi06G016400Cucurbita moschata (Rifu)cmolsiB207
Lsi06G016400Cucurbita moschata (Rifu)cmolsiB239
Lsi06G016400Cucurbita moschata (Rifu)cmolsiB376
Lsi06G016400Cucurbita pepo (Zucchini)cpelsiB298
Lsi06G016400Cucurbita pepo (Zucchini)cpelsiB433
Lsi06G016400Cucurbita pepo (Zucchini)cpelsiB556
Lsi06G016400Cucurbita pepo (Zucchini)cpelsiB569
Lsi06G016400Wild cucumber (PI 183967)cpilsiB068
Lsi06G016400Wild cucumber (PI 183967)cpilsiB070
Lsi06G016400Wild cucumber (PI 183967)cpilsiB224
Lsi06G016400Cucumber (Chinese Long) v2culsiB067
Lsi06G016400Cucumber (Chinese Long) v2culsiB070
Lsi06G016400Cucumber (Chinese Long) v2culsiB225
Lsi06G016400Melon (DHL92) v3.5.1lsimeB392
Lsi06G016400Melon (DHL92) v3.5.1lsimeB397
Lsi06G016400Melon (DHL92) v3.5.1lsimeB421
Lsi06G016400Watermelon (Charleston Gray)lsiwcgB363
Lsi06G016400Watermelon (Charleston Gray)lsiwcgB369
Lsi06G016400Watermelon (Charleston Gray)lsiwcgB372
Lsi06G016400Watermelon (97103) v1lsiwmB394
Lsi06G016400Watermelon (97103) v1lsiwmB414
Lsi06G016400Cucumber (Gy14) v2cgyblsiB064
Lsi06G016400Cucumber (Gy14) v2cgyblsiB067
Lsi06G016400Cucumber (Gy14) v2cgyblsiB214