Lsi06G015780 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAGGGCGAGACAAAGTTCGGTTCCGAGGAATTGCAGGACAGTAATTGCTCGTTCGTTTGGGATGAGAATTCTCAGCTGTACTTCCATTCCAGGTTTCTTTAACTATACTCTCATAAATTCATTTCGTTTTGCTGATTTTTCATGGCCAAATCAACTAACATTTGCGAAGAAGATTTGCTATTTCTGAAGTTACAGATGATTCGAACGAACATGTTAAGATAGCGTAATGGCAAAGGTTTAATTGAGGAGTAATCTTATTGTTCTATAACTTTAAATCACAAGCAATTCGTATTAATTTTGTTGATTTTCTTGCTTAATAGATAGCGATTTGATGTACTGAATAAAAACATTTGTCATATATCGAACTGTTAGATGCTATGTGTGCCGGTATCTTCACACATTTTCTTCTATCTTCTGCGAAATTTTATCCTACTGTTAGTCCGTTATTTCTTCCGGTGAAGGATTGTCGCCGAATTTCAATATTTCTGCTTCAATGTTGCCATTTCAACTACATTTTCTACTGCAAATTGTTACTTACCTGCGTTACTTCTAACAGTAGTGGATTTTATCACGATCCTGTTGCCGGTTGGTATTATAGCAGTCGAGATGGTTCTTATTACAAATTCGAAAATGGAAGCTATGTGCTTCTTCAGTTGAACGAGGTATCGTGACTTGGTTGTTTATATGGTCATCACTTATTACTTCCTTTCATATTCTCTGTGATCTTCTTTCGTTTTGATTTGATATCGCTCTAAATAATTCCCTGCTTTTTTAACATCGTAGCAGGGTGAAGAATGTAAGACGTATCCTGATAATCCTGTTAACGGCGAATCATGTAGTCAAGTGTGTAATACTGGCAGCGAGGATCACTCTTCATTTGAGGCCAGTGAAATTGATACTTCTAAATGCAAAGAAATTGATGGTGACGGACTACCATTAGGTTAGTTATCAACGCACGTAAACGTTCTTCAGGCAATTACACTGCAGCTACTTTGTATTCACTTAGATACTAAGTTTAGCCGTTAATAAGGAGCTGCTAATTGCGTATCTTCTACTAATTCTTACTCACTTAGAGGTGGCATGGCCTCCACGGTGAACCACCTGCCCTCCCCTCCAATACGCTCCATCCTTATTGACAGGAAAATCTTCACTTTACAGTATGCCACAACCACAAATGGCCATGAGATCCTACTAACGGAACAAGGAAAAGCATCAAACCAATCACTCAGTCTCTCTCGGAAAGCATTGGATTGGTTGGCATCCTCCTTCCGATCGCTTCATCGAGACCCCTGCAACTACAAGTTTTTCAAAAAATTGATTGATGACAATGCAACTCTTTGGTTGGAAAAACATAGTAACAAGCATGACTACTATGCAGAATTGACTTAG ATGGAGGAGGGCGAGACAAAGTTCGGTTCCGAGGAATTGCAGGACAGTAATTGCTCGTTCGTTTGGGATGAGAATTCTCAGCTGTACTTCCATTCCAGTAGTGGATTTTATCACGATCCTGTTGCCGGTTGGTATTATAGCAGTCGAGATGGTTCTTATTACAAATTCGAAAATGGAAGCTATGTGCTTCTTCAGTTGAACGAGGGTGAAGAATGTAAGACGTATCCTGATAATCCTGTTAACGGCGAATCATGTAGTCAAGTGTGTAATACTGGCAGCGAGGATCACTCTTCATTTGAGGCCAGTGAAATTGATACTTCTAAATGCAAAGAAATTGATGGTGACGGACTACCATTAGGAGCTGCTAATTGCGTATCTTCTACTAATTCTTACTCACTTAGAGGTGGCATGGCCTCCACGGTGAACCACCTGCCCTCCCCTCCAATACGCTCCATCCTTATTGACAGGAAAATCTTCACTTTACAGTATGCCACAACCACAAATGGCCATGAGATCCTACTAACGGAACAAGGAAAAGCATCAAACCAATCACTCAGTCTCTCTCGGAAAGCATTGGATTGGTTGGCATCCTCCTTCCGATCGCTTCATCGAGACCCCTGCAACTACAAGTTTTTCAAAAAATTGATTGATGACAATGCAACTCTTTGGTTGGAAAAACATAGTAACAAGCATGACTACTATGCAGAATTGACTTAG ATGGAGGAGGGCGAGACAAAGTTCGGTTCCGAGGAATTGCAGGACAGTAATTGCTCGTTCGTTTGGGATGAGAATTCTCAGCTGTACTTCCATTCCAGTAGTGGATTTTATCACGATCCTGTTGCCGGTTGGTATTATAGCAGTCGAGATGGTTCTTATTACAAATTCGAAAATGGAAGCTATGTGCTTCTTCAGTTGAACGAGGGTGAAGAATGTAAGACGTATCCTGATAATCCTGTTAACGGCGAATCATGTAGTCAAGTGTGTAATACTGGCAGCGAGGATCACTCTTCATTTGAGGCCAGTGAAATTGATACTTCTAAATGCAAAGAAATTGATGGTGACGGACTACCATTAGGAGCTGCTAATTGCGTATCTTCTACTAATTCTTACTCACTTAGAGGTGGCATGGCCTCCACGGTGAACCACCTGCCCTCCCCTCCAATACGCTCCATCCTTATTGACAGGAAAATCTTCACTTTACAGTATGCCACAACCACAAATGGCCATGAGATCCTACTAACGGAACAAGGAAAAGCATCAAACCAATCACTCAGTCTCTCTCGGAAAGCATTGGATTGGTTGGCATCCTCCTTCCGATCGCTTCATCGAGACCCCTGCAACTACAAGTTTTTCAAAAAATTGATTGATGACAATGCAACTCTTTGGTTGGAAAAACATAGTAACAAGCATGACTACTATGCAGAATTGACTTAG MEEGETKFGSEELQDSNCSFVWDENSQLYFHSSSGFYHDPVAGWYYSSRDGSYYKFENGSYVLLQLNEGEECKTYPDNPVNGESCSQVCNTGSEDHSSFEASEIDTSKCKEIDGDGLPLGAANCVSSTNSYSLRGGMASTVNHLPSPPIRSILIDRKIFTLQYATTTNGHEILLTEQGKASNQSLSLSRKALDWLASSFRSLHRDPCNYKFFKKLIDDNATLWLEKHSNKHDYYAELT
BLAST of Lsi06G015780 vs. TrEMBL
Match: A0A0A0LP33_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004190 PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 1.7e-50 Identity = 103/121 (85.12%), Postives = 105/121 (86.78%), Query Frame = 1
BLAST of Lsi06G015780 vs. TrEMBL
Match: A0A067KFL6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11431 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 2.4e-25 Identity = 69/138 (50.00%), Postives = 85/138 (61.59%), Query Frame = 1
BLAST of Lsi06G015780 vs. TrEMBL
Match: V4TIF2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10023760mg PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 4.3e-22 Identity = 79/205 (38.54%), Postives = 106/205 (51.71%), Query Frame = 1
BLAST of Lsi06G015780 vs. TrEMBL
Match: A0A0B2RG75_GLYSO (SURP and G-patch domain-containing protein 1-like protein OS=Glycine soja GN=glysoja_017475 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.6e-21 Identity = 59/119 (49.58%), Postives = 78/119 (65.55%), Query Frame = 1
BLAST of Lsi06G015780 vs. TrEMBL
Match: K7KKZ5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G186500 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.6e-21 Identity = 59/119 (49.58%), Postives = 78/119 (65.55%), Query Frame = 1
BLAST of Lsi06G015780 vs. TAIR10
Match: AT4G34140.1 (AT4G34140.1 D111/G-patch domain-containing protein) HSP 1 Score: 79.7 bits (195), Expect = 2.7e-15 Identity = 37/60 (61.67%), Postives = 45/60 (75.00%), Query Frame = 1
BLAST of Lsi06G015780 vs. NCBI nr
Match: gi|778655527|ref|XP_011655410.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101205178 [Cucumis sativus]) HSP 1 Score: 212.2 bits (539), Expect = 9.7e-52 Identity = 103/120 (85.83%), Postives = 105/120 (87.50%), Query Frame = 1
BLAST of Lsi06G015780 vs. NCBI nr
Match: gi|700208457|gb|KGN63553.1| (hypothetical protein Csa_1G004190 [Cucumis sativus]) HSP 1 Score: 207.6 bits (527), Expect = 2.4e-50 Identity = 103/121 (85.12%), Postives = 105/121 (86.78%), Query Frame = 1
BLAST of Lsi06G015780 vs. NCBI nr
Match: gi|659129113|ref|XP_008464535.1| (PREDICTED: uncharacterized protein LOC103502387 isoform X2 [Cucumis melo]) HSP 1 Score: 203.4 bits (516), Expect = 4.5e-49 Identity = 101/120 (84.17%), Postives = 102/120 (85.00%), Query Frame = 1
BLAST of Lsi06G015780 vs. NCBI nr
Match: gi|659129111|ref|XP_008464534.1| (PREDICTED: uncharacterized protein LOC103502387 isoform X1 [Cucumis melo]) HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47 Identity = 101/121 (83.47%), Postives = 102/121 (84.30%), Query Frame = 1
BLAST of Lsi06G015780 vs. NCBI nr
Match: gi|659129115|ref|XP_008464536.1| (PREDICTED: uncharacterized protein LOC103502387 isoform X3 [Cucumis melo]) HSP 1 Score: 193.0 bits (489), Expect = 6.1e-46 Identity = 100/121 (82.64%), Postives = 101/121 (83.47%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |