Lsi06G011740 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G011740
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_4
Location	chr06 : 22028579 .. 22029382 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCATGGACGACACCAACGAAACCAATCCCCTAACGTCTCAACGCAATCAAGATGAAGACGACGAATCAGACGAATCACTCTCCTTCTCCGATCTTCCGCTCGACAGACAAAAATCCGACGGCCACGCTCATCCGGAAAGCTTCCGCAAGAATCCACGTAGGTCCTCCTCCGAGCCTCTTGATCTCTTCGAATTCTTCAGCACTGGATTCATCACCTCCGAGATGTCTCCGGCAGAGGATTTGATCTTCTGCGGCAGATTGCTTCCTCTCAACGATCATTCTCCGCTTACTACGCGTACTACCGAGAAGTGTTTCTGGAAGGAAGAGATCAGCCGAAAACAGACTGTCTTTCGAAAACGATCCGAGTCATTGTCTGGATTGCAGAGCTCTGTTTCTCGATCCAACAGCGCGAAATTCAATCTCAGGCGGAATAGCCGATCGCTCGATTACCGCAAGCTCTATCGCCAAACGAATTCGATTTTCTCGCCGACGGCTGAAATCGATCGTAATTGTTCGATCAAGAGCGGATTGAAGCCTGATTCACTGAACAAAAAGGCCTCGTCGAAGCCGAGGTGGTACTTGCTAATGTTCGGAATGGTGAAGTTTCCAGCGGAGATGGACCTCAGCGACATTAAGAGCAGACAAGTCCGCCGAAGTTCGTCGACACTTTTTCCGGCGAATGAGAGTAAAGGTAAATTTCACTGCAACCGGAGCTCCGGCGAGGCGACTTGGAGGATCCTTCGAGCGCTCAGCTGCAAGAATCACGCTAGTGTAGATGTAACGGCGTCGTTAACTGCCTAA

mRNA sequence

ATGTTCATGGACGACACCAACGAAACCAATCCCCTAACGTCTCAACGCAATCAAGATGAAGACGACGAATCAGACGAATCACTCTCCTTCTCCGATCTTCCGCTCGACAGACAAAAATCCGACGGCCACGCTCATCCGGAAAGCTTCCGCAAGAATCCACGTAGGTCCTCCTCCGAGCCTCTTGATCTCTTCGAATTCTTCAGCACTGGATTCATCACCTCCGAGATGTCTCCGGCAGAGGATTTGATCTTCTGCGGCAGATTGCTTCCTCTCAACGATCATTCTCCGCTTACTACGCGTACTACCGAGAAGTGTTTCTGGAAGGAAGAGATCAGCCGAAAACAGACTGTCTTTCGAAAACGATCCGAGTCATTGTCTGGATTGCAGAGCTCTGTTTCTCGATCCAACAGCGCGAAATTCAATCTCAGGCGGAATAGCCGATCGCTCGATTACCGCAAGCTCTATCGCCAAACGAATTCGATTTTCTCGCCGACGGCTGAAATCGATCGTAATTGTTCGATCAAGAGCGGATTGAAGCCTGATTCACTGAACAAAAAGGCCTCGTCGAAGCCGAGGTGGTACTTGCTAATGTTCGGAATGGTGAAGTTTCCAGCGGAGATGGACCTCAGCGACATTAAGAGCAGACAAGTCCGCCGAAGTTCGTCGACACTTTTTCCGGCGAATGAGAGTAAAGGTAAATTTCACTGCAACCGGAGCTCCGGCGAGGCGACTTGGAGGATCCTTCGAGCGCTCAGCTGCAAGAATCACGCTAGTGTAGATGTAACGGCGTCGTTAACTGCCTAA

Coding sequence (CDS)

ATGTTCATGGACGACACCAACGAAACCAATCCCCTAACGTCTCAACGCAATCAAGATGAAGACGACGAATCAGACGAATCACTCTCCTTCTCCGATCTTCCGCTCGACAGACAAAAATCCGACGGCCACGCTCATCCGGAAAGCTTCCGCAAGAATCCACGTAGGTCCTCCTCCGAGCCTCTTGATCTCTTCGAATTCTTCAGCACTGGATTCATCACCTCCGAGATGTCTCCGGCAGAGGATTTGATCTTCTGCGGCAGATTGCTTCCTCTCAACGATCATTCTCCGCTTACTACGCGTACTACCGAGAAGTGTTTCTGGAAGGAAGAGATCAGCCGAAAACAGACTGTCTTTCGAAAACGATCCGAGTCATTGTCTGGATTGCAGAGCTCTGTTTCTCGATCCAACAGCGCGAAATTCAATCTCAGGCGGAATAGCCGATCGCTCGATTACCGCAAGCTCTATCGCCAAACGAATTCGATTTTCTCGCCGACGGCTGAAATCGATCGTAATTGTTCGATCAAGAGCGGATTGAAGCCTGATTCACTGAACAAAAAGGCCTCGTCGAAGCCGAGGTGGTACTTGCTAATGTTCGGAATGGTGAAGTTTCCAGCGGAGATGGACCTCAGCGACATTAAGAGCAGACAAGTCCGCCGAAGTTCGTCGACACTTTTTCCGGCGAATGAGAGTAAAGGTAAATTTCACTGCAACCGGAGCTCCGGCGAGGCGACTTGGAGGATCCTTCGAGCGCTCAGCTGCAAGAATCACGCTAGTGTAGATGTAACGGCGTCGTTAACTGCCTAA

Protein sequence

MFMDDTNETNPLTSQRNQDEDDESDESLSFSDLPLDRQKSDGHAHPESFRKNPRRSSSEPLDLFEFFSTGFITSEMSPAEDLIFCGRLLPLNDHSPLTTRTTEKCFWKEEISRKQTVFRKRSESLSGLQSSVSRSNSAKFNLRRNSRSLDYRKLYRQTNSIFSPTAEIDRNCSIKSGLKPDSLNKKASSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSTLFPANESKGKFHCNRSSGEATWRILRALSCKNHASVDVTASLTA

Homology

[Close]

BLAST of Lsi06G011740 vs. TrEMBL
Match: A0A0A0LU50_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423130 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 4.7e-118
Identity = 228/270 (84.44%), Postives = 244/270 (90.37%), Query Frame = 1


Query: 3   MDDTNETNPLTSQRNQDEDDES----DESLSFSDLPLDRQKSDGHAHPESFRKNPRRSSS 62
           MDDT+E+NPLTS+RNQ EDD      DESLSFSDLP+DR+ SD H HP+SFRKN RRSSS
Sbjct: 1   MDDTSESNPLTSKRNQHEDDNDFESDDESLSFSDLPMDRENSDAHTHPDSFRKNSRRSSS 60

Query: 63  EPLDLFEFFSTGFITSEMSPAEDLIFCGRLLPLN-DHSPLTTRTTEKCFWKEEISRKQTV 122
           EPLDLFEFF+ G ITSE+SPAEDLIFCGRLLPLN DHS  T  T +K  WKEEISRKQTV
Sbjct: 61  EPLDLFEFFTAGLITSEISPAEDLIFCGRLLPLNNDHS--TRITADKSSWKEEISRKQTV 120

Query: 123 FRKRSESLSGLQSSVSRSNSAKFNLRRNSRSLDYRKLYRQTNSIFSPTAEIDRNCSIKSG 182
           FRKRSESLSGLQSSVSRSNSAKFNL+RNSRSLDYR+LYRQ+NSIFSPTAEIDRNCSIK+G
Sbjct: 121 FRKRSESLSGLQSSVSRSNSAKFNLKRNSRSLDYRRLYRQSNSIFSPTAEIDRNCSIKTG 180

Query: 183 LKPDSLNKKASSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSTLFPANESKGKFHCN 242
           LKPDSLNK+ SSKPRWYLLMFGMVKFPAEM+LSDIKSRQVRRSSSTLFP NESK K+HC 
Sbjct: 181 LKPDSLNKRTSSKPRWYLLMFGMVKFPAEMELSDIKSRQVRRSSSTLFPTNESKSKYHCG 240

Query: 243 RSSGEATWRILRALSCKNHASVDVTASLTA 268
            SSGEATWRILRALSCKNHASVDVTASLTA
Sbjct: 241 WSSGEATWRILRALSCKNHASVDVTASLTA 268

[Close]

BLAST of Lsi06G011740 vs. TrEMBL
Match: F6GXG9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00900 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 3.2e-50
Identity = 135/257 (52.53%), Postives = 175/257 (68.09%), Query Frame = 1


Query: 8   ETNPLTSQRNQDEDDESDESLSFSDLPLDRQKSDGHAHPESFRKNPRRSSSEPLDLFEFF 67
           ETN + +   Q+ ++E++E+LS  DLP+   ++ G    + F    RRS+SEP +LFEFF
Sbjct: 2   ETNDVVANV-QNSEEEAEEALSLCDLPISASETSG----KDFSPCGRRSTSEPPELFEFF 61

Query: 68  STGFITSEMSPAEDLIFCGRLLPLNDHSPLTTRTTEKCFWKEEISRKQTVFRKRSESLSG 127
           S   ++ EMSPA+++IFCG+L+P  D      +T E    K+   +K +  R+RSESLS 
Sbjct: 62  SN--LSYEMSPADEIIFCGKLVPFKD-----AQTREIQDNKQGSVQKASTLRRRSESLSE 121

Query: 128 LQSSVSRSNSAKFNLRRNSRSLDYRKLYRQTNSIFSPTAEIDRNCSIKSGLKPDSLNKKA 187
           LQ+S  RSNSAK  L RNSRSLDYRKLYR ++S  SP  E+DRN S KS  + D   +K 
Sbjct: 122 LQTS--RSNSAKSRLVRNSRSLDYRKLYRSSSSQTSPGPEMDRNSSDKSSGRSDISVRKV 181

Query: 188 SSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSTLFPANESKGKFHCNRSSGEATWRI 247
             K RWYLLMFG+VKFP EM+L DIKSRQVRRS STLFP+ ++  K    RSSG+ +W I
Sbjct: 182 P-KSRWYLLMFGLVKFPPEMELRDIKSRQVRRSPSTLFPSLDASVKVPVKRSSGKCSWGI 241

Query: 248 LRALSCKNHASVDVTAS 265
           LRALSCK+ ASV VTAS
Sbjct: 242 LRALSCKD-ASVAVTAS 242

[Close]

BLAST of Lsi06G011740 vs. TrEMBL
Match: W9R2S2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012849 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.9e-43
Identity = 135/280 (48.21%), Postives = 173/280 (61.79%), Query Frame = 1


Query: 2   FMDDTN-ETNPLTSQRNQDEDDESDESLSFSDLPLDRQKSDGHAHPESFRKNPRRSSSEP 61
           F DD N + + +  Q+ +++ +E++E+LS S+LPL    S  +    S     RRS+SEP
Sbjct: 3   FNDDNNLDIHHIQQQQEEEDQEEAEEALSLSELPLSNDMSSKNNTTNS----NRRSASEP 62

Query: 62  LDLFEFFSTGFITSEMSPAEDLIFCGRLLPLNDHSPLTTRTTEKCFWKEEISRKQTV-FR 121
            +LFEFFS       MS AED+IFCGRL+P  + SP       K  + ++   K T  FR
Sbjct: 63  PELFEFFSDLSSDHNMSSAEDIIFCGRLIPFREQSP------PKFNFSKDFDEKPTSGFR 122

Query: 122 KRSESLSGLQSS-VSRS--NSAKFNLRRNSRSLDYRKLYRQTN-SIFSPTAEIDRNCSIK 181
           +RSESLS LQSS VSRS  N+    + RNSRSLDY+KL R  N S  SP  +IDRN S K
Sbjct: 123 RRSESLSELQSSGVSRSSSNTKARMVMRNSRSLDYQKLRRAWNTSAVSPALDIDRNSSTK 182

Query: 182 SGLKPDSLNKKASSKPRWY-LLMFGMVKFPAEMDLSDIKSRQVRRS---SSTLFPANESK 241
           S  K D   KKA  + RW   LMFG VKFPAEM+L DIKSRQ RR+   ++TLFP  +S 
Sbjct: 183 SVGKRDVSPKKAG-RVRWSSFLMFGTVKFPAEMELGDIKSRQARRNVPITTTLFPPMDSG 242

Query: 242 GKFHCNRSS-------GEATWRILRALSCKNHASVDVTAS 265
           G    +RS+       G  +WR+L+ALSCK+HASV VTAS
Sbjct: 243 GNLPVSRSNSSKSGGGGGGSWRLLKALSCKDHASVAVTAS 271

[Close]

BLAST of Lsi06G011740 vs. TrEMBL
Match: V4UQM0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010819mg PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.6e-41
Identity = 115/266 (43.23%), Postives = 164/266 (61.65%), Query Frame = 1


Query: 21  DDESDESLSFSDLPLDRQKSDGH------AHPESFRKNPRRSSSEPLDLFEFFSTGFITS 80
           ++E++E+LS  DLPLD + +  +      A  +S R  PR SS+E  D F  F +G  +S
Sbjct: 16  EEEAEEALSLCDLPLDEEDNAANNNSQEIATSQSQRHTPRSSSTEAQDQFFEFLSGDFSS 75

Query: 81  EMSPAEDLIFCGRLLPLNDHSPLTTRTTEKCFWKEEISRKQTVFRKRSESLSGLQS--SV 140
           EM PAED+IFCG+L+         +R           ++ + +  +RSESLS L S  + 
Sbjct: 76  EMCPAEDIIFCGKLISSTPQPDPPSRVLSN------EAKTKGILHRRSESLSDLDSYATT 135

Query: 141 SRSNSAKFNLR--RNSRSLDYRKLYRQTNSIFSPTAEIDRNCSIKSGLKPDSLNKKASSK 200
            RSNS K N +  R SRSLDY++L R  +S  S   +I+R+ S+KS  K D+ NK+ASSK
Sbjct: 136 PRSNSTKNNYQFLRISRSLDYQRLRRFGSSKTSSDLDIERSASVKSVGKSDN-NKRASSK 195

Query: 201 PRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSTLFPANESKGKFHCNRSSG--------- 260
           P+WY  + G+VKFP EMD+ DI+SRQ RRSSS +FP+ +++G F  NRS+G         
Sbjct: 196 PKWYFPLLGIVKFPPEMDIRDIRSRQFRRSSSVMFPSLDAEGNFPANRSTGSKSSSSSSS 255

Query: 261 --EATWRILRALSCKNHASVDVTASL 266
              ++W+ ++ALSC +HASV VTASL
Sbjct: 256 SSSSSWKFIKALSCSDHASVAVTASL 274

[Close]

BLAST of Lsi06G011740 vs. TrEMBL
Match: A0A067DU18_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047348mg PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 3.5e-41
Identity = 114/268 (42.54%), Postives = 164/268 (61.19%), Query Frame = 1


Query: 21  DDESDESLSFSDLPLDRQKSDGH--------AHPESFRKNPRRSSSEPLDLFEFFSTGFI 80
           ++E++E+LS  DLPLD + +  +        +  +S R  PR SS+E  D F  F +G  
Sbjct: 16  EEEAEEALSLCDLPLDEEDNAANNNSQEIATSQSQSQRHTPRSSSTEAQDQFFEFLSGDF 75

Query: 81  TSEMSPAEDLIFCGRLLPLNDHSPLTTRTTEKCFWKEEISRKQTVFRKRSESLSGLQS-- 140
           +SEM PAED+IFCG+L+         +R           ++ + +  +RSESLS L S  
Sbjct: 76  SSEMCPAEDIIFCGKLISSTPQPDPPSRVLSN------EAKTKGILHRRSESLSDLDSYA 135

Query: 141 SVSRSNSAKFNLR--RNSRSLDYRKLYRQTNSIFSPTAEIDRNCSIKSGLKPDSLNKKAS 200
           +  RSNS K N +  R SRSLDY++L R  +S  S   +I+R+ S+KS  K D+ NK+AS
Sbjct: 136 TTPRSNSTKNNYQFLRISRSLDYQRLRRFGSSKTSSDLDIERSASVKSVGKSDN-NKRAS 195

Query: 201 SKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSTLFPANESKGKFHCNRSSG------- 260
           SKP+WY  + G+VKFP EMD+ DI+SRQ RRSSS +FP+ +++G F  NRS+G       
Sbjct: 196 SKPKWYFPLLGIVKFPPEMDIRDIRSRQFRRSSSVMFPSLDAEGNFPANRSTGSKSSSSS 255

Query: 261 ----EATWRILRALSCKNHASVDVTASL 266
                ++W+ ++ALSC +HASV VTASL
Sbjct: 256 SSSSSSSWKFIKALSCSDHASVAVTASL 276

[Close]

BLAST of Lsi06G011740 vs. TAIR10
Match: AT4G30230.1 (AT4G30230.1 unknown protein)

HSP 1 Score: 120.6 bits (301), Expect = 1.5e-27
Identity = 100/276 (36.23%), Postives = 147/276 (53.26%), Query Frame = 1


Query: 5   DTNETNP--LTSQRNQDEDDESDESLSFSDLPLDRQKSDGHAHPESFRKNPRRSSSEP-- 64
           +TN  NP  L        ++E +++LS  DLPL               KNP  +++E   
Sbjct: 6   NTNLQNPTKLPKPFQHHLEEEKEDALSLRDLPLKA-------------KNPNPTTTEDHK 65

Query: 65  ---LDLFEFFSTGFITSEMSPAEDLIFCGRLLPLNDHSPLTTRTTEKCFWKEEISRKQTV 124
               +LFEF ++   + +++PAE++IF G+L+PLN  +   +         E ISR+   
Sbjct: 66  EPSTELFEFLTSS--SYDVAPAENIIFGGKLIPLNYQNAFFSPP-------EHISRR--- 125

Query: 125 FRKRSESLSGLQS-SVSRSNSAKFNLRRN------SRSLDYRKLYRQTNSIFSPTAEIDR 184
            R RSESLS +Q   ++R  S     R N      SRSLDYRKL R   ++ SP    + 
Sbjct: 126 IRSRSESLSAIQGHKLNRPGSCTVARRDNAGPMRASRSLDYRKLSRGLTTVHSPP---EN 185

Query: 185 NCSIKSGLKPDSLNKKA--SSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRS-SSTLFPA 244
           + S K+  KP++ +  +  S +PRWY++MFGMVKFP E++L DIKSRQ+RR+    +FP+
Sbjct: 186 SSSTKNTGKPETTSSGSVKSVRPRWYVIMFGMVKFPPEIELKDIKSRQIRRNIPPVMFPS 245

Query: 245 NESKGKFHCNRSSGEATWRILRALSCKNHASVDVTA 264
             ++        S   +WR L ALSCK   SV  TA
Sbjct: 246 PANRRARGSRSPSPSPSWRFLNALSCKKPTSVAATA 253

[Close]

BLAST of Lsi06G011740 vs. NCBI nr
Match: gi|659107303|ref|XP_008453606.1| (PREDICTED: uncharacterized protein LOC103494265 [Cucumis melo])

HSP 1 Score: 454.5 bits (1168), Expect = 1.3e-124
Identity = 236/268 (88.06%), Postives = 250/268 (93.28%), Query Frame = 1


Query: 3   MDDTNETNPLTSQRNQDEDD---ESDESLSFSDLPLDRQKSDGHAHPESFRKNPRRSSSE 62
           MDDT+E+NPLTS+RNQ EDD   ESDESLSFSDLP+DR+ SD H HP+SFRKNPRRSSSE
Sbjct: 1   MDDTSESNPLTSKRNQHEDDDDFESDESLSFSDLPMDRENSDAHTHPDSFRKNPRRSSSE 60

Query: 63  PLDLFEFFSTGFITSEMSPAEDLIFCGRLLPLNDHSPLTTRTTEKCFWKEEISRKQTVFR 122
           PLDLFEFFS GFITSE+SPAEDLIFCGRLLPLNDHS  T  T +K FWKEEISRKQTVFR
Sbjct: 61  PLDLFEFFSAGFITSEISPAEDLIFCGRLLPLNDHS--TRITADKSFWKEEISRKQTVFR 120

Query: 123 KRSESLSGLQSSVSRSNSAKFNLRRNSRSLDYRKLYRQTNSIFSPTAEIDRNCSIKSGLK 182
           KRSESLSGLQSSVSRSNSAKFNL+RNSRSLDYR+LYRQ NSIFSPTAEIDRNCSIK+GLK
Sbjct: 121 KRSESLSGLQSSVSRSNSAKFNLKRNSRSLDYRRLYRQANSIFSPTAEIDRNCSIKTGLK 180

Query: 183 PDSLNKKASSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSTLFPANESKGKFHCNRS 242
           PDSLNKK SSKPRWYLLMFGMVKFPAEM+LSDIKSRQVRRSSSTLFP+NE+K KFHC RS
Sbjct: 181 PDSLNKKTSSKPRWYLLMFGMVKFPAEMELSDIKSRQVRRSSSTLFPSNETKSKFHCGRS 240

Query: 243 SGEATWRILRALSCKNHASVDVTASLTA 268
           SGEATWRILRALSCKNHASVDVTASLTA
Sbjct: 241 SGEATWRILRALSCKNHASVDVTASLTA 266

[Close]

BLAST of Lsi06G011740 vs. NCBI nr
Match: gi|778660738|ref|XP_011656822.1| (PREDICTED: uncharacterized protein LOC105435774 [Cucumis sativus])

HSP 1 Score: 432.2 bits (1110), Expect = 6.7e-118
Identity = 228/270 (84.44%), Postives = 244/270 (90.37%), Query Frame = 1


Query: 3   MDDTNETNPLTSQRNQDEDDES----DESLSFSDLPLDRQKSDGHAHPESFRKNPRRSSS 62
           MDDT+E+NPLTS+RNQ EDD      DESLSFSDLP+DR+ SD H HP+SFRKN RRSSS
Sbjct: 1   MDDTSESNPLTSKRNQHEDDNDFESDDESLSFSDLPMDRENSDAHTHPDSFRKNSRRSSS 60

Query: 63  EPLDLFEFFSTGFITSEMSPAEDLIFCGRLLPLN-DHSPLTTRTTEKCFWKEEISRKQTV 122
           EPLDLFEFF+ G ITSE+SPAEDLIFCGRLLPLN DHS  T  T +K  WKEEISRKQTV
Sbjct: 61  EPLDLFEFFTAGLITSEISPAEDLIFCGRLLPLNNDHS--TRITADKSSWKEEISRKQTV 120

Query: 123 FRKRSESLSGLQSSVSRSNSAKFNLRRNSRSLDYRKLYRQTNSIFSPTAEIDRNCSIKSG 182
           FRKRSESLSGLQSSVSRSNSAKFNL+RNSRSLDYR+LYRQ+NSIFSPTAEIDRNCSIK+G
Sbjct: 121 FRKRSESLSGLQSSVSRSNSAKFNLKRNSRSLDYRRLYRQSNSIFSPTAEIDRNCSIKTG 180

Query: 183 LKPDSLNKKASSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSTLFPANESKGKFHCN 242
           LKPDSLNK+ SSKPRWYLLMFGMVKFPAEM+LSDIKSRQVRRSSSTLFP NESK K+HC 
Sbjct: 181 LKPDSLNKRTSSKPRWYLLMFGMVKFPAEMELSDIKSRQVRRSSSTLFPTNESKSKYHCG 240

Query: 243 RSSGEATWRILRALSCKNHASVDVTASLTA 268
            SSGEATWRILRALSCKNHASVDVTASLTA
Sbjct: 241 WSSGEATWRILRALSCKNHASVDVTASLTA 268

[Close]

BLAST of Lsi06G011740 vs. NCBI nr
Match: gi|731408614|ref|XP_010656920.1| (PREDICTED: uncharacterized protein LOC104880802 [Vitis vinifera])

HSP 1 Score: 206.8 bits (525), Expect = 4.6e-50
Identity = 135/257 (52.53%), Postives = 175/257 (68.09%), Query Frame = 1


Query: 8   ETNPLTSQRNQDEDDESDESLSFSDLPLDRQKSDGHAHPESFRKNPRRSSSEPLDLFEFF 67
           ETN + +   Q+ ++E++E+LS  DLP+   ++ G    + F    RRS+SEP +LFEFF
Sbjct: 2   ETNDVVANV-QNSEEEAEEALSLCDLPISASETSG----KDFSPCGRRSTSEPPELFEFF 61

Query: 68  STGFITSEMSPAEDLIFCGRLLPLNDHSPLTTRTTEKCFWKEEISRKQTVFRKRSESLSG 127
           S   ++ EMSPA+++IFCG+L+P  D      +T E    K+   +K +  R+RSESLS 
Sbjct: 62  SN--LSYEMSPADEIIFCGKLVPFKD-----AQTREIQDNKQGSVQKASTLRRRSESLSE 121

Query: 128 LQSSVSRSNSAKFNLRRNSRSLDYRKLYRQTNSIFSPTAEIDRNCSIKSGLKPDSLNKKA 187
           LQ+S  RSNSAK  L RNSRSLDYRKLYR ++S  SP  E+DRN S KS  + D   +K 
Sbjct: 122 LQTS--RSNSAKSRLVRNSRSLDYRKLYRSSSSQTSPGPEMDRNSSDKSSGRSDISVRKV 181

Query: 188 SSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSTLFPANESKGKFHCNRSSGEATWRI 247
             K RWYLLMFG+VKFP EM+L DIKSRQVRRS STLFP+ ++  K    RSSG+ +W I
Sbjct: 182 P-KSRWYLLMFGLVKFPPEMELRDIKSRQVRRSPSTLFPSLDASVKVPVKRSSGKCSWGI 241

Query: 248 LRALSCKNHASVDVTAS 265
           LRALSCK+ ASV VTAS
Sbjct: 242 LRALSCKD-ASVAVTAS 242

[Close]

BLAST of Lsi06G011740 vs. NCBI nr
Match: gi|645234191|ref|XP_008223699.1| (PREDICTED: uncharacterized protein LOC103323479 [Prunus mume])

HSP 1 Score: 201.1 bits (510), Expect = 2.5e-48
Identity = 124/251 (49.40%), Postives = 166/251 (66.14%), Query Frame = 1


Query: 16  RNQDEDDESDESLSFSDLPLDRQKSDGHAHPE--SFRKNPRRSSSEPLDLFEFFSTGFIT 75
           +++ E+++++E+LS  DLPLD      H   +  S     RRSSS+   LFEFFS     
Sbjct: 13  QDKSEEEDAEEALSLCDLPLDNTHDQVHEFHDMSSNHLQARRSSSD--QLFEFFSDISSD 72

Query: 76  SEMSPAEDLIFCGRLLPLNDHSPLTTRTTEKCFWKEEISRKQTVFRKRSESLSGLQSSVS 135
           S M  AED+I CG+L+P   H     +        +    KQ  FR+RSESLS LQSSV+
Sbjct: 73  SFMCSAEDIIVCGKLIPFKQHMTEVPKAHPNP--NDSHKNKQPTFRRRSESLSELQSSVT 132

Query: 136 RSNSAKFNLR-RNSRSLDYRKLYRQTNSIFSPTAEIDRNCSIKSGLKPDSLNKKASSKPR 195
           RS+S+K  +  RNSRSLDYRKL RQ++ +     E++RN S++S  K D + K   +KPR
Sbjct: 133 RSSSSKNQIMMRNSRSLDYRKLQRQSSMVSPTPGEMERNSSVRSVGKSDKV-KSGYNKPR 192

Query: 196 WYLLMFGMVKFPAEMDLSDIKSRQVRRS-SSTLFPANESKGKFHCNRSSGEATWRILRAL 255
           W+ LMFG+VKFPAEMDLSDIK+RQ+RR+ S+T+FP     GKF  NRSSG+ +WR+L+AL
Sbjct: 193 WFFLMFGIVKFPAEMDLSDIKNRQIRRNPSTTMFPREVVAGKFPDNRSSGKGSWRLLKAL 252

Query: 256 SCKNHASVDVT 263
           SCK+HASV VT
Sbjct: 253 SCKDHASVAVT 258

[Close]

BLAST of Lsi06G011740 vs. NCBI nr
Match: gi|658023437|ref|XP_008347123.1| (PREDICTED: uncharacterized protein LOC103410145 [Malus domestica])

HSP 1 Score: 191.8 bits (486), Expect = 1.5e-45
Identity = 126/264 (47.73%), Postives = 173/264 (65.53%), Query Frame = 1


Query: 3   MDDTNETNPLTSQRNQDEDDE-SDESLSFSDLPLDR-QKSDGHAHPESFRK-NPRRSSSE 62
           M+D N    +   R+Q E++E ++E+LS SDLPLD   +     H  S +  + RRSS++
Sbjct: 1   MEDXNYVENIPRYRDQSEEEEDAEEALSLSDLPLDNIHEQVNEVHDRSSKHLHTRRSSAD 60

Query: 63  PLDLFEFFSTGFITSEMSPAEDLIFCGRLLPLNDHSPLTTRTTEKCFWKEEISRKQTVFR 122
               FEFFS     S M  AED+I CG+L+P  DH+    +TT  C       +K + FR
Sbjct: 61  --QFFEFFSDFSSDSFMCSAEDIIVCGKLIPFKDHTNEXPKTT--CT-NNGYHKKDSSFR 120

Query: 123 KRSESLSGLQSSVSRSNSAKFNLR-RNSRSLDYRKLYRQTNSIFSPTAEIDRNCSIKSGL 182
           +RSESL GLQSSV+RS+S K  +  RNSRSLDY+KL+RQ++ +    AE++RN S KS  
Sbjct: 121 RRSESLPGLQSSVARSSSTKNQIMMRNSRSLDYQKLHRQSSMVSPTPAEMERNSSTKSVG 180

Query: 183 KPDSLNKKASSKPRWYLLMFGMVKFPAEMDLSDIKSRQVRRSSSTLFPANESKGKFHCNR 242
           K D   KK+ +KP+W+  MFG+V+FP+EMDLSDIK+RQ+RR+ ST    +E+      NR
Sbjct: 181 KYD---KKSGNKPKWFFXMFGIVRFPSEMDLSDIKNRQIRRNPSTTLFRSEASD----NR 240

Query: 243 SSGEATWRILRALSCKNHASVDVT 263
           SS + +WR+LRALSCK+HASV VT
Sbjct: 241 SSEKGSWRLLRALSCKDHASVAVT 252

The following BLAST results are available for this feature:

BLAST of Lsi06G011740 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi06G011740 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU50_CUCSA	4.7e-118	84.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423130 PE=4 SV=1	[more]
F6GXG9_VITVI	3.2e-50	52.53	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0052g00900 PE=4 SV=...	[more]
W9R2S2_9ROSA	4.9e-43	48.21	Uncharacterized protein OS=Morus notabilis GN=L484_012849 PE=4 SV=1	[more]
V4UQM0_9ROSI	1.6e-41	43.23	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010819mg PE=4 SV=1	[more]
A0A067DU18_CITSI	3.5e-41	42.54	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g047348mg PE=4 SV=1	[more]

BLAST of Lsi06G011740 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30230.1	1.5e-27	36.23	unknown protein	[more]

BLAST of Lsi06G011740 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107303\|ref\|XP_008453606.1\|	1.3e-124	88.06	PREDICTED: uncharacterized protein LOC103494265 [Cucumis melo]	[more]
gi\|778660738\|ref\|XP_011656822.1\|	6.7e-118	84.44	PREDICTED: uncharacterized protein LOC105435774 [Cucumis sativus]	[more]
gi\|731408614\|ref\|XP_010656920.1\|	4.6e-50	52.53	PREDICTED: uncharacterized protein LOC104880802 [Vitis vinifera]	[more]
gi\|645234191\|ref\|XP_008223699.1\|	2.5e-48	49.40	PREDICTED: uncharacterized protein LOC103323479 [Prunus mume]	[more]
gi\|658023437\|ref\|XP_008347123.1\|	1.5e-45	47.73	PREDICTED: uncharacterized protein LOC103410145 [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G011740.1	Lsi06G011740.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34130	FAMILY NOT NAMED	coord: 1..264 score: 6.7
None	No IPR available	PANTHER	PTHR34130:SF2	SUBFAMILY NOT NAMED	coord: 1..264 score: 6.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G011740	Csa1G423130	Cucumber (Chinese Long) v2	culsiB059
Lsi06G011740	CSPI01G20270	Wild cucumber (PI 183967)	cpilsiB060
Lsi06G011740	Cucsa.092500	Cucumber (Gy14) v1	cgylsiB106
Lsi06G011740	CmaCh10G003970	Cucurbita maxima (Rimu)	cmalsiB075
Lsi06G011740	CmoCh10G004270	Cucurbita moschata (Rifu)	cmolsiB061
Lsi06G011740	Cla018828	Watermelon (97103) v1	lsiwmB414
Lsi06G011740	MELO3C017464	Melon (DHL92) v3.5.1	lsimeB397
Lsi06G011740	ClCG06G013330	Watermelon (Charleston Gray)	lsiwcgB372
Lsi06G011740	MELO3C017464.2	Melon (DHL92) v3.6.1	lsimedB419
Lsi06G011740	Cla97C06G122770	Watermelon (97103) v2	lsiwmbB374
Lsi06G011740	Bhi02G000571	Wax gourd	lsiwgoB524
Lsi06G011740	Cp4.1LG18g06200	Cucurbita pepo (Zucchini)	cpelsiB301
Lsi06G011740	Carg15242	Silver-seed gourd	carlsiB726
Lsi06G011740	CsaV3_1G031590	Cucumber (Chinese Long) v3	cuclsiB069

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G011740	Silver-seed gourd	carlsiB540
Lsi06G011740	Cucumber (Chinese Long) v3	cuclsiB143
Lsi06G011740	Watermelon (97103) v2	lsiwmbB360
Lsi06G011740	Wax gourd	lsiwgoB479
Lsi06G011740	Wax gourd	lsiwgoB503
Lsi06G011740	Bottle gourd (USVL1VR-Ls)	lsilsiB058
Lsi06G011740	Cucumber (Gy14) v1	cgylsiB103
Lsi06G011740	Cucurbita maxima (Rimu)	cmalsiB143
Lsi06G011740	Cucurbita maxima (Rimu)	cmalsiB180
Lsi06G011740	Cucurbita maxima (Rimu)	cmalsiB733
Lsi06G011740	Cucurbita moschata (Rifu)	cmolsiB128
Lsi06G011740	Cucurbita moschata (Rifu)	cmolsiB170
Lsi06G011740	Cucurbita moschata (Rifu)	cmolsiB722
Lsi06G011740	Cucurbita pepo (Zucchini)	cpelsiB097
Lsi06G011740	Cucurbita pepo (Zucchini)	cpelsiB556
Lsi06G011740	Cucurbita pepo (Zucchini)	cpelsiB681
Lsi06G011740	Wild cucumber (PI 183967)	cpilsiB131
Lsi06G011740	Cucumber (Chinese Long) v2	culsiB132
Lsi06G011740	Melon (DHL92) v3.5.1	lsimeB419
Lsi06G011740	Watermelon (Charleston Gray)	lsiwcgB356
Lsi06G011740	Watermelon (97103) v1	lsiwmB413
Lsi06G011740	Cucumber (Gy14) v2	cgyblsiB056
Lsi06G011740	Cucumber (Gy14) v2	cgyblsiB071
Lsi06G011740	Cucumber (Gy14) v2	cgyblsiB121
Lsi06G011740	Melon (DHL92) v3.6.1	lsimedB423
Lsi06G011740	Melon (DHL92) v3.6.1	lsimedB441