Lsi06G011620 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G011620
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionF-box protein
Locationchr06 : 21845809 .. 21847011 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAATTCAGGGTCATGAATGCTGGTGATATTCCCTTTGATGTTTTATCCCGGTTGCCAGCTAAGACTCTTATTGAAATGAGATGCGTTTCAAAAGAGTGGTATCAACTTATTTCAGACAGATCATTTGTACAAGCTCAGTTTCAGAAGACTGGATTGATGTTATCAGGTTTCATATTTCAGGAGAAATACCAAAAATGCCTTGACGATATTAGAACATTCAGCTATATGCCAGTAAATGCAGATTCTAAGGTGCAGAAAATGGTGTTTGGTTTCCTGCCTGAGGATGTTGTTATTTTGGCATCCTGTAATGGCCTGGTTTGTTGTAGAAGTTGCTTCCCTACACAACACCCCACAACAATCTACGTCTGCAATCCCTTGTTTAAGAAGTGGGTGAGTTTTGAAGTGGCTCAGCTGGACAGGTTTAGTAACATTGCTATGTCATTTGATCCCATACTGGACCCTATAAACACTTCAACGAACTTCAAAATAGTTAGAATTCAGCAGTTGGAGAATGAGCAAGAAGAATTATACTACACATTTGAAATATACGCTTCAAGAACAGGAACCTCGAAGAAATCAAATGAAGTTTGTTATTCAAATGGCAATTTGTTCAAGAACAAAGGCATTTATGCCAAAGGGGTCTTACATTGGCTTACAGATAAGGATCAAATCATTGCATTTGATACAGAGAAAGAACTTTGTTTGTTGATTTCATCTCCAATTCCTGCCTTGGAATTTTTCATCAACGTTCCTGGAACATGCATTGGAGAATCCAAGGGCTTATTGAATTTCATCATGATCTGTGAAGATGGAATTATTGTATGGTGTCTGGAAGACTATTTTGAAACAAAATGGACGCACAAACATTGGAAACAACTCCAAGTGATTGAAGAAGAGAACCCAAAGTTGTTTTTCAAGTTGTACAAGAACATGCAGCAGAAACGGGTTGCAGGTATGGATCCATGGATGGATCCCTTGGCATTTAAAGATGAGGTATTATTGATGAGGGTGTATTCAACCTTCTATTTCTACCACACTGAAACAGGGAAGGTGGTGGAAGTCTGTAACGTTACCAGTTTGGGTCCAAACCCCTATGTTGATCCTTCAGCGATTCCTTATTCGTTGAGCTTGGTTCCATTGAACATTTCTCTCTCACAATCTGATTCAAATAGCACCAGAAACCCCAGTGAGAATTAG

mRNA sequence

ATGGAGAAATTCAGGGTCATGAATGCTGGTGATATTCCCTTTGATGTTTTATCCCGGTTGCCAGCTAAGACTCTTATTGAAATGAGATGCGTTTCAAAAGAGTGGTATCAACTTATTTCAGACAGATCATTTGTACAAGCTCAGTTTCAGAAGACTGGATTGATGTTATCAGGTTTCATATTTCAGGAGAAATACCAAAAATGCCTTGACGATATTAGAACATTCAGCTATATGCCAGTAAATGCAGATTCTAAGGTGCAGAAAATGGTGTTTGGTTTCCTGCCTGAGGATGTTGTTATTTTGGCATCCTGTAATGGCCTGGTTTGTTGTAGAAGTTGCTTCCCTACACAACACCCCACAACAATCTACGTCTGCAATCCCTTGTTTAAGAAGTGGGTGAGTTTTGAAGTGGCTCAGCTGGACAGGTTTAGTAACATTGCTATGTCATTTGATCCCATACTGGACCCTATAAACACTTCAACGAACTTCAAAATAGTTAGAATTCAGCAGTTGGAGAATGAGCAAGAAGAATTATACTACACATTTGAAATATACGCTTCAAGAACAGGAACCTCGAAGAAATCAAATGAAGTTTGTTATTCAAATGGCAATTTGTTCAAGAACAAAGGCATTTATGCCAAAGGGGTCTTACATTGGCTTACAGATAAGGATCAAATCATTGCATTTGATACAGAGAAAGAACTTTGTTTGTTGATTTCATCTCCAATTCCTGCCTTGGAATTTTTCATCAACGTTCCTGGAACATGCATTGGAGAATCCAAGGGCTTATTGAATTTCATCATGATCTGTGAAGATGGAATTATTGTATGGTGTCTGGAAGACTATTTTGAAACAAAATGGACGCACAAACATTGGAAACAACTCCAAGTGATTGAAGAAGAGAACCCAAAGTTGTTTTTCAAGTTGTACAAGAACATGCAGCAGAAACGGGTTGCAGGTATGGATCCATGGATGGATCCCTTGGCATTTAAAGATGAGGTATTATTGATGAGGGTGTATTCAACCTTCTATTTCTACCACACTGAAACAGGGAAGGTGGTGGAAGTCTGTAACGTTACCAGTTTGGGTCCAAACCCCTATGTTGATCCTTCAGCGATTCCTTATTCGTTGAGCTTGGTTCCATTGAACATTTCTCTCTCACAATCTGATTCAAATAGCACCAGAAACCCCAGTGAGAATTAG

Coding sequence (CDS)

ATGGAGAAATTCAGGGTCATGAATGCTGGTGATATTCCCTTTGATGTTTTATCCCGGTTGCCAGCTAAGACTCTTATTGAAATGAGATGCGTTTCAAAAGAGTGGTATCAACTTATTTCAGACAGATCATTTGTACAAGCTCAGTTTCAGAAGACTGGATTGATGTTATCAGGTTTCATATTTCAGGAGAAATACCAAAAATGCCTTGACGATATTAGAACATTCAGCTATATGCCAGTAAATGCAGATTCTAAGGTGCAGAAAATGGTGTTTGGTTTCCTGCCTGAGGATGTTGTTATTTTGGCATCCTGTAATGGCCTGGTTTGTTGTAGAAGTTGCTTCCCTACACAACACCCCACAACAATCTACGTCTGCAATCCCTTGTTTAAGAAGTGGGTGAGTTTTGAAGTGGCTCAGCTGGACAGGTTTAGTAACATTGCTATGTCATTTGATCCCATACTGGACCCTATAAACACTTCAACGAACTTCAAAATAGTTAGAATTCAGCAGTTGGAGAATGAGCAAGAAGAATTATACTACACATTTGAAATATACGCTTCAAGAACAGGAACCTCGAAGAAATCAAATGAAGTTTGTTATTCAAATGGCAATTTGTTCAAGAACAAAGGCATTTATGCCAAAGGGGTCTTACATTGGCTTACAGATAAGGATCAAATCATTGCATTTGATACAGAGAAAGAACTTTGTTTGTTGATTTCATCTCCAATTCCTGCCTTGGAATTTTTCATCAACGTTCCTGGAACATGCATTGGAGAATCCAAGGGCTTATTGAATTTCATCATGATCTGTGAAGATGGAATTATTGTATGGTGTCTGGAAGACTATTTTGAAACAAAATGGACGCACAAACATTGGAAACAACTCCAAGTGATTGAAGAAGAGAACCCAAAGTTGTTTTTCAAGTTGTACAAGAACATGCAGCAGAAACGGGTTGCAGGTATGGATCCATGGATGGATCCCTTGGCATTTAAAGATGAGGTATTATTGATGAGGGTGTATTCAACCTTCTATTTCTACCACACTGAAACAGGGAAGGTGGTGGAAGTCTGTAACGTTACCAGTTTGGGTCCAAACCCCTATGTTGATCCTTCAGCGATTCCTTATTCGTTGAGCTTGGTTCCATTGAACATTTCTCTCTCACAATCTGATTCAAATAGCACCAGAAACCCCAGTGAGAATTAG

Protein sequence

MEKFRVMNAGDIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKTGLMLSGFIFQEKYQKCLDDIRTFSYMPVNADSKVQKMVFGFLPEDVVILASCNGLVCCRSCFPTQHPTTIYVCNPLFKKWVSFEVAQLDRFSNIAMSFDPILDPINTSTNFKIVRIQQLENEQEELYYTFEIYASRTGTSKKSNEVCYSNGNLFKNKGIYAKGVLHWLTDKDQIIAFDTEKELCLLISSPIPALEFFINVPGTCIGESKGLLNFIMICEDGIIVWCLEDYFETKWTHKHWKQLQVIEEENPKLFFKLYKNMQQKRVAGMDPWMDPLAFKDEVLLMRVYSTFYFYHTETGKVVEVCNVTSLGPNPYVDPSAIPYSLSLVPLNISLSQSDSNSTRNPSEN
Homology
[Close]
BLAST of Lsi06G011620 vs. Swiss-Prot
Match: FB341_ARATH (F-box protein At5g49610 OS=Arabidopsis thaliana GN=At5g49610 PE=1 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 2.2e-11
Identity = 74/309 (23.95%), Postives = 127/309 (41.10%), Query Frame = 1 

Query: 11  DIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQA--QFQKTGLMLSGFIFQEKYQKC 70
           ++   +L+RLP K+L   + V K WY+L SD+ F     Q      +L   +       C
Sbjct: 12  EVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQLSVKEQLLVAEVSDSSSLIC 71

Query: 71  LDDIRTFSYMPVNADSKVQKMVFGFLPEDVVILASCNGLVCCRSCFPTQHPTTIYVCNPL 130
           +D++R            V ++   F+ + V I  S NGL+CC S          YVCNP 
Sbjct: 72  VDNLR-----------GVSELSLDFVRDRVRIRVSSNGLLCCSS---IPEKGVYYVCNPS 131

Query: 131 ---FKKWVSFEVAQLDRF--SNIAMSFDPILDPINTSTNFKIVRIQQLENEQEELYYTFE 190
              ++K        + RF     A       D      N  +    +   ++ +  +   
Sbjct: 132 TREYRKLPKSRERPVTRFYPDGEATLVGLACDLSKNKFNVVLAGYHRSFGQRPDGSFICL 191

Query: 191 IYASRTGTSKKSNEVC--YSNGNLFKNKGIYAKGVLHWL-TDKDQIIAFDTEKELCLLIS 250
           ++ S +   +K   V    S  ++ KN+ ++  G+LHWL +    I+A D E ++   IS
Sbjct: 192 VFDSESNKWRKFVSVLEECSFTHMSKNQVVFVNGMLHWLMSGLCYILALDVEHDVWRKIS 251

Query: 251 SPIPALEFFINVPG---TCIGESKGLLNFIMICEDGIIVWCLEDYFETKWTHKHWKQLQV 307
            P    E  I   G     + ES G L+ I + +  + +W + +Y    W+      L+ 
Sbjct: 252 LPD---EIRIGNGGGNRVYLLESDGFLSVIQLSDVWMKIWKMSEYETETWSVVDSISLRC 303

[Close]
BLAST of Lsi06G011620 vs. Swiss-Prot
Match: FB253_ARATH (F-box protein At5g07610 OS=Arabidopsis thaliana GN=At5g07610 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.0e-09
Identity = 59/231 (25.54%), Postives = 107/231 (46.32%), Query Frame = 1 

Query: 6   VMNAGDIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKT-GLMLSGFIFQEK 65
           V +  D+   +LS LP KTL+  + VSK W  LI++  F     +    L +SGF     
Sbjct: 31  VADIDDVLIQILSFLPIKTLLRFKRVSKRWLSLITNPVFSNRVIKSNHPLPISGFFLHSP 90

Query: 66  YQKCLDDIRTFSYMPVNADSKVQKMVFGFLP-------EDVVILASCNGLVCCR-SCFPT 125
            +        +S++ ++ D+  Q+ +   LP        D++I+ S NGL+ C+ SC  +
Sbjct: 91  RE------IKYSFVSLDDDATNQR-ISSSLPLWFTDHQTDMIIMQSTNGLLLCKCSCASS 150

Query: 126 QH-PTTIYVCNPLFKKWVSFEVAQLDRFSNIAMSFDPILDPINTSTNFKIVRIQQLEN-- 185
            H  T  YV NP  K++      Q+     ++++FDP     + S ++K+  ++   N  
Sbjct: 151 NHFNTNYYVYNPTTKQYTLLH--QIAGHIALSLAFDP-----SRSPHYKVFCLRGRSNNS 210

Query: 186 ----EQEELYYTFEIYASRTGTSKKSNEVCYSNGNLFK-NKGIYAKGVLHW 220
                  ELY+  E+Y+S  G  ++   V  S     + +  ++  G ++W
Sbjct: 211 FSSASDSELYH-IEVYSSNEGLWRRVVPVPTSPSTFIEFSYSVFWNGAVNW 246

[Close]
BLAST of Lsi06G011620 vs. Swiss-Prot
Match: FB299_ARATH (Putative F-box protein At5g62660 OS=Arabidopsis thaliana GN=At5g62660 PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 5.9e-09
Identity = 66/298 (22.15%), Postives = 123/298 (41.28%), Query Frame = 1 

Query: 11  DIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKTGLMLSGFIFQEKYQKCLD 70
           D+  ++L++LPAK+L+  +CVSK W  LI  R F               ++       L 
Sbjct: 44  DLLIEILTKLPAKSLMRFKCVSKLWSSLIRSRFFSNCYLTVKTPRRPPRLYMSLVDHLLC 103

Query: 71  DIRTFSYMPV---------NADSKVQKM-VFGFLPEDVVILASCNGLVCCRSCFPTQHPT 130
           +     + P          +A+S  Q + + G    ++V+L      V CR+       T
Sbjct: 104 NSLMVCHYPCESVLLSSSSSAESLEQNLTIAGMGGRNMVVLRGLILYVVCRTASIYNPTT 163

Query: 131 TIYVCNPLFKKWVSFEVAQLDRFSNIA--MSFDPILDPINTSTNFKIV-RIQQLENEQEE 190
              V  P  K  +   +AQ   ++++     +DP+LD       +K+V  +       + 
Sbjct: 164 RQSVTLPAVKSNI---LAQKSHWNSLLYFFGYDPVLD------QYKVVCTVALFSKRLKR 223

Query: 191 LYYTFEIYASRTGTSKKSNEVCYSNGNLFKNKGIYAKGVLHWLTD----KDQIIAFDTEK 250
           +     ++    G S K  E  +   +L    G+   GV+++L      +D +++FD   
Sbjct: 224 ITSEHWVFVLEPGGSWKRIE--FDQPHLPTRLGLCVNGVIYYLASTWKRRDIVVSFDVRS 283

Query: 251 ELCLLISSPIPALEFFINVPGTCIGESKGLLNFIMICEDGII-VWCLEDYFETKWTHK 291
           E   +I  P+    F  +V     G    + ++ M+ + G++ +W LED    KW+ K
Sbjct: 284 EEFSMIQGPLKVSAFSESVGFIEYGGKPAVFDYTMMKQTGLVDLWVLED--AGKWSRK 328

[Close]
BLAST of Lsi06G011620 vs. Swiss-Prot
Match: FB30_ARATH (Putative F-box protein At1g32420 OS=Arabidopsis thaliana GN=At1g32420 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 8.5e-08
Identity = 64/286 (22.38%), Postives = 115/286 (40.21%), Query Frame = 1 

Query: 11  DIPFDVLSRLPAKTLIEMRCVSKEWYQLISDR-----SFVQAQFQKTGLMLSGFIFQEKY 70
           D+  ++L +LPAK+L+  +CVSK+W  +IS R     S V     +        IF  + 
Sbjct: 40  DLTVEILKKLPAKSLLRFQCVSKQWLSIISSRRDFIDSIVTRSLTQPPPRDIKLIFHHQV 99

Query: 71  QKCLDDIRTF-SYMPVNADSKVQKMVFGFLPEDVVILAS----CNGLVCCRSCFPTQHPT 130
                    F S  P N D            E +   AS      GL+CC S      PT
Sbjct: 100 LYPGPHFFIFSSTYPQNTDK-----------ESLTTRASSYHYVRGLICCWS----HCPT 159

Query: 131 TIYVCNPLFKKWVSFEVAQLDRFSNIAMSFDPILDPINTSTNFKIVRIQQLENEQEELYY 190
           T+ + NP  +++  + V   +R+  I   F    DP+     +K++ + +   E+     
Sbjct: 160 TVDIYNPTTRQY--YTVPDTNRYQYIETCFFG-YDPV--ENQYKVMVLPKYYMEESPC-- 219

Query: 191 TFEIYASRTGTSKKSNEVCYSNGNLFKNKGIYAKGVLHWLTDKDQ-----IIAFDTEKEL 250
             +++       K   ++     +      +   GV+++    +      +++FD   E 
Sbjct: 220 --QVFTVGDPIEKPWRDIQGIGVHFLLKDAVCINGVIYYQATNEYGSTYFLVSFDVRSEK 279

Query: 251 CLLISSPIPALEFFINVPGTCIGESKGLLNFIMICEDGIIVWCLED 282
              + +P    +   + P T I   +G L  IM C+ G+ +W +ED
Sbjct: 280 FNHVKAP----KILTDHPCTLI-NYQGKLGLIMCCKKGLEIWVMED 296

[Close]
BLAST of Lsi06G011620 vs. Swiss-Prot
Match: FB183_ARATH (Putative F-box protein At3g23970 OS=Arabidopsis thaliana GN=At3g23970 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.5e-07
Identity = 64/252 (25.40%), Postives = 102/252 (40.48%), Query Frame = 1 

Query: 11  DIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKTGLMLSGFIFQEKYQKCLD 70
           ++ F+VL RLP K+L   R V KEW  +I    F           +S  I Q +  K   
Sbjct: 6   ELTFEVLVRLPLKSLARFRSVRKEWKLVIDSEFFRDCFMSHNSSSVSWSIIQTRPHKLTL 65

Query: 71  DIRTFSYMPVNADSKVQKMVFGFLPEDVV----ILASCNGLVCCRSCFPTQHPTTI-YVC 130
           +I           ++    + GF  +  +    +LA  +GLV   +   T + T + YV 
Sbjct: 66  EIVGHHGCKTWGLTRSPGSLVGFFADTTIKRLRVLACTDGLVLIYT--ETSYGTPMHYVG 125

Query: 131 NPLFKKWVS------FEVAQLDRFSNIAMSFDPIL---DPINTSTNFKIVRIQQLENEQE 190
           NPLF++W        F +  ++R  N     D  L          ++K+V +      + 
Sbjct: 126 NPLFQEWCPIPLPSYFYLQSVERIRNHQRFNDSALVIKMQSGAVVSYKVVWL----FPRN 185

Query: 191 ELYYTFEIYASRTGTSKKSNEVCYSNGNLFK-NKGIYAKGVLHWLTD-KDQIIAFD---- 243
                F IY+S TG  +     C  +   F  +K I   G+LHWL +     +A+D    
Sbjct: 186 STTIDFLIYSSDTGMWEARIATCLHSSFWFSHHKPIALNGILHWLCNFSTSFVAYDFYGG 245

[Close]
BLAST of Lsi06G011620 vs. TrEMBL
Match: A0A0A0LW82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G269910 PE=4 SV=1)

HSP 1 Score: 651.0 bits (1678), Expect = 9.6e-184
Identity = 312/397 (78.59%), Postives = 352/397 (88.66%), Query Frame = 1 

Query: 8   NAGDIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKTGLMLSGFIFQEKYQK 67
           NAGDI FDVLSRLP KTL+EMR VSK W++LI DRSFVQAQFQK GL LSGF+FQEKY+K
Sbjct: 3   NAGDILFDVLSRLPTKTLLEMRFVSKAWHRLILDRSFVQAQFQKCGLALSGFMFQEKYRK 62

Query: 68  CLDDIRTFSYMPVNADSKVQKMVFGFLPEDVVILASCNGLVCCRSCFPTQHP----TTIY 127
           C  DI TF+YMP++ADSKVQKMVFGFLPEDVVIL SCNGLVCCRSCF TQH     TTIY
Sbjct: 63  CPIDISTFTYMPIDADSKVQKMVFGFLPEDVVILQSCNGLVCCRSCFRTQHSTTHSTTIY 122

Query: 128 VCNPLFKKWVSFEVAQLDRFSNIAMSFDPILDPINTSTNFKIVRIQQLENEQEELYYTFE 187
           VCNPLFKKWVSFEVAQLD FS+IA++FDPILDP+NT+TNFK+VRIQQLENEQEE+YYTFE
Sbjct: 123 VCNPLFKKWVSFEVAQLDSFSSIALAFDPILDPVNTATNFKVVRIQQLENEQEEMYYTFE 182

Query: 188 IYASRTGTSKKSNEVCYSNGNLFKNKGIYAKGVLHWLTDKDQIIAFDTEKELCLLISSPI 247
           IY+S TGT K+S+EVCYS+GNL KN G YAKGVLHWLTD DQI+AFDTEKEL LL+ SPI
Sbjct: 183 IYSSETGTWKESSEVCYSDGNLLKNNGTYAKGVLHWLTDTDQILAFDTEKELSLLVPSPI 242

Query: 248 PALEFFINVPGTCIGESKGLLNFIMICEDGIIVWCLEDYFETKWTHKHWKQLQVIEEENP 307
           PALE FI+ PGTCIGESKGLL+FIMICEDGIIVWCL+DYFE KWT KH KQLQ+IE+ENP
Sbjct: 243 PALEMFIDAPGTCIGESKGLLHFIMICEDGIIVWCLDDYFEAKWTLKHSKQLQMIEDENP 302

Query: 308 KLFFKLYKNMQQKRVAGMDPWMDPLAFKDEVLLMRVYSTFYFYHTETGKVVEVCNVTSLG 367
            +FFKLYK MQ++R+ GM+P+MDP AFKDEVLLMRV+ST YFYH ETGKVVEVCNV SLG
Sbjct: 303 NMFFKLYKIMQRRRLPGMEPYMDPWAFKDEVLLMRVFSTVYFYHIETGKVVEVCNVASLG 362

Query: 368 PNPYVDPSAIPYSLSLVPLNISLSQSDSNSTRNPSEN 401
           PN +V P  IPYSLSL+PL++SLS+SD N+  NP+EN
Sbjct: 363 PNAFVSPPVIPYSLSLIPLDVSLSRSDPNNNTNPNEN 399

[Close]
BLAST of Lsi06G011620 vs. TrEMBL
Match: W9QCJ9_9ROSA (F-box protein OS=Morus notabilis GN=L484_010471 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 4.4e-112
Identity = 213/403 (52.85%), Postives = 287/403 (71.22%), Query Frame = 1 

Query: 1   MEKFRVMNAGDIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKTGLMLSGFI 60
           M K R +N  DI F+VLS+LP K L+ ++CVSK W  LISDR F+QAQ +KT L +SGFI
Sbjct: 1   MGKARYLN-DDIFFNVLSQLPTKILVGLKCVSKGWKSLISDRRFIQAQLRKTELTVSGFI 60

Query: 61  FQEKYQKCLDDIRTFSYMPVNADS-KVQKMVFGFLPEDVVILASCNGLVCCRSCFPTQHP 120
           FQEK+Q   +DI+T SY+PV  +S +V++ VF FLPED+V+LASC+GLVCCRSCFPT+ P
Sbjct: 61  FQEKFQWYEEDIKTVSYIPVGKESFEVKQSVFDFLPEDIVVLASCDGLVCCRSCFPTEDP 120

Query: 121 TTIYVCNPLFKKWVSFEVAQLDRFSNIAMSFDPILDPINTSTNFKIVRIQQLENEQ--EE 180
             IY+CNP+ K++V+   A LDR S++A++FDP  + ++TSTNFK+VR QQ E E+  E+
Sbjct: 121 A-IYICNPVNKEFVTLRCAGLDRDSSVALAFDPSQELVDTSTNFKVVRAQQFEIEEGEED 180

Query: 181 LYYTFEIYASRTGTSKKSNEVCYSNGNLFKNKGIYAKGVLHWLTDKDQIIAFDTEKELCL 240
           LY+TFEIY+S+ G  +KSNE+C  N +L KNKGIY  G+LHWLTD D I+ FD+EKEL  
Sbjct: 181 LYFTFEIYSSKAGEWRKSNEICKCNTSLSKNKGIYIGGILHWLTDGDNILTFDSEKELSW 240

Query: 241 LISSPIPALEFFINVPGTCIGESKGLLNFIMICEDGIIVWCLEDYFETKWTHKHWKQLQV 300
           LIS P+PA EF  ++P  CIGES G L+++MI E+G+ +WCLEDYFE+KW  K+ K L+ 
Sbjct: 241 LISVPVPASEFK-SIPQACIGESDGRLHYVMISEEGLHLWCLEDYFESKWALKYSKPLRT 300

Query: 301 IEEENPKLFFKLYKNMQQKRVAGMDPWMDPLAFKDEVLLMRVYSTFYFYHTETGKVVEVC 360
           +E+E+P+L   L++ +         PW++PLAFKD +LLM V +  Y YH ET K+  VC
Sbjct: 301 MEKEHPRLLCNLHERVMSV-YDTETPWVNPLAFKDGLLLMIVSAKIYLYHFETSKMQVVC 360

Query: 361 NVTSLGPNPYVDPSAIPYSLSLVPLNISLSQSDSNSTRNPSEN 401
               LG +    P+ +PYS+SLVPL   LS  D +   N   N
Sbjct: 361 EAFKLGSSSIFFPTVLPYSMSLVPL---LSTVDDSVAGNKLTN 396

[Close]
BLAST of Lsi06G011620 vs. TrEMBL
Match: B9N360_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s05590g PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 4.4e-104
Identity = 192/378 (50.79%), Postives = 263/378 (69.58%), Query Frame = 1 

Query: 11  DIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKTGLMLSGFIFQEKYQKCLD 70
           DIPFDVLSRL  K L+ ++CVSK W  LISDRSF+QAQ QK    LSGF FQ++++ C D
Sbjct: 10  DIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKKE-PLSGFFFQQRHRYCPD 69

Query: 71  DIRTFSYMPVNADSKVQKMVFGFLPEDVVILASCNGLVCCRSCFPTQHPTTIYVCNPLFK 130
           DI+T +Y PV  + ++Q+ VF FLP+DVV+LA CNGLVCCRSC+P + P  IYVCNPL  
Sbjct: 70  DIKTITYFPVERN-RLQQDVFAFLPQDVVVLALCNGLVCCRSCYPFEDPA-IYVCNPLNS 129

Query: 131 KWVSFEVAQLDRFSNIAMSFDPILDPINTSTNFKIVRIQQLENEQEELYYTFEIYASRTG 190
           +W   +  +  + S IA++F+P  D     TNFK+VR +Q E EQEE Y++FEIYASRT 
Sbjct: 130 EWWKLDWKEPGKESFIALAFNPFQDISVNLTNFKVVRPRQFETEQEEAYFSFEIYASRTR 189

Query: 191 TSKKSNEVCYSNGNLFKNKGIYAKGVLHWLTDKDQIIAFDTEKELCLLISSPIPALEFFI 250
             K S EVC+ + +L KN+GI++ G+LHWLTD DQI+ F+ E EL LLIS+P+PA EF  
Sbjct: 190 NWKLSKEVCWCDNSLSKNEGIFSGGILHWLTDGDQILTFNVENELALLISTPLPAGEFNT 249

Query: 251 NVPGTCIGESKGLLNFIMICEDGIIVWCLEDYFETKWTHKHWKQLQVIEEENPKLFFKLY 310
             P  CIGES+G L +++I E+G+ VW LEDYF++ W+ K+ K L  IE+E+  +   LY
Sbjct: 250 R-PHACIGESEGQLYYVLISEEGLHVWVLEDYFDSTWSLKYSKTLAQIEKEHSDIMINLY 309

Query: 311 KNMQQKRVAGMDPWMDPLAFKDEVLLMRVYSTFYFYHTETGKVVEVCNVTSLGPNPYVDP 370
             +   +     PWMDPLAFKD VL++R+ +T Y YH +T K+ EV   +  G   +V P
Sbjct: 310 NRVMLWQRIDDRPWMDPLAFKDGVLVVRISNTIYLYHVDTSKMEEVGETSKFGAMSWVSP 369

Query: 371 SAIPYSLSLVPLNISLSQ 389
             +PY++SLVPL +++++
Sbjct: 370 IVLPYTMSLVPLGLNIAR 383

[Close]
BLAST of Lsi06G011620 vs. TrEMBL
Match: A9P8R5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s05590g PE=2 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 2.2e-103
Identity = 193/376 (51.33%), Postives = 259/376 (68.88%), Query Frame = 1 

Query: 11  DIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKTGLMLSGFIFQEKYQKCLD 70
           DIPFDVLSRL  K L+ ++CVSK W  LISDRSF+QAQ QK    LSGF FQ++++ C D
Sbjct: 10  DIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKKE-PLSGFFFQQRHRYCPD 69

Query: 71  DIRTFSYMPVNADSKVQKMVFGFLPEDVVILASCNGLVCCRSCFPTQHPTTIYVCNPLFK 130
           DI+T +Y PV  + ++Q+ VF FLP+DVV+LA CNGLVCCRSC+P + P  IYVCNPL  
Sbjct: 70  DIKTITYFPVERN-RLQQDVFAFLPQDVVVLALCNGLVCCRSCYPFEDPA-IYVCNPLNS 129

Query: 131 KWVSFEVAQLDRFSNIAMSFDPILDPINTSTNFKIVRIQQLENEQEELYYTFEIYASRTG 190
           +W   +  +  + S IA++F+P  D     TNFK+VR +Q E EQEE Y++FEIYASRT 
Sbjct: 130 EWWKLDWKEPGKESFIALAFNPFQDISVNLTNFKVVRPRQFETEQEEAYFSFEIYASRTR 189

Query: 191 TSKKSNEVCYSNGNLFKNKGIYAKGVLHWLTDKDQIIAFDTEKELCLLISSPIPALEFFI 250
             K S EVC+ + +L KN+GI++ G+LHWLTD DQI+ F+ E EL LLIS+P+PA EF  
Sbjct: 190 NWKLSKEVCWCDNSLSKNEGIFSGGILHWLTDGDQILTFNVENELALLISTPLPAGEFNT 249

Query: 251 NVPGTCIGESKGLLNFIMICEDGIIVWCLEDYFETKWTHKHWKQLQVIEEENPKLFFKLY 310
             P  CIGES+G L +++I E+G+ VW LEDYF++ W+ K+ K L  IE+E+  +   LY
Sbjct: 250 R-PHACIGESEGQLYYVLISEEGLHVWVLEDYFDSTWSLKYSKTLAQIEKEHSDIMINLY 309

Query: 311 KNMQQKRVAGMDPWMDPLAFKDEVLLMRVYSTFYFYHTETGKVVEVCNVTSLGPNPYVDP 370
             +   +     PWMDPLAFKD VL++R+ +T Y YH +T K+ EV   +  G   +V P
Sbjct: 310 NRVMLWQRIDDRPWMDPLAFKDGVLVVRISNTIYLYHVDTSKMEEVGETSKFGAMSWVSP 369

Query: 371 SAIPYSLSLVPLNISL 387
             +PY++SLVPL   L
Sbjct: 370 IVLPYTMSLVPLGRQL 381

[Close]
BLAST of Lsi06G011620 vs. TrEMBL
Match: D7U4A6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g01730 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 4.1e-102
Identity = 187/379 (49.34%), Postives = 257/379 (67.81%), Query Frame = 1 

Query: 7   MNAGDIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKTGLMLSGFIFQEKYQ 66
           M + DI  DVLSRLP KTL+ ++CV K W ++ISDRSF+Q   Q+    L+GF FQE+YQ
Sbjct: 1   MESDDICMDVLSRLPTKTLLGLKCVCKRWRRIISDRSFIQDLLQRPE-PLAGFFFQERYQ 60

Query: 67  KCLDDIRTFSYMPVNAD-SKVQKMVFGFLPEDVVILASCNGLVCCRSCFPTQHPTTIYVC 126
            C +DI T SY+P   + ++VQ+ +F FLPEDVVIL SCNGLVCCRS FP+  P+ I+VC
Sbjct: 61  WCDEDISTISYIPATMEGTQVQQTIFSFLPEDVVILGSCNGLVCCRSVFPSPDPS-IFVC 120

Query: 127 NPLFKKWVSFEVAQLDRFSNIAMSFDPILDPINTSTNFKIVRIQQLENEQEE-LYYTFEI 186
           NP  K+W+       D+ S+  ++F+P   PI+  TNFK+VR+ Q + + ++  Y++FEI
Sbjct: 121 NPSNKQWIRLLETTPDKESSYGLAFNPFQSPIDMPTNFKVVRVSQAQTDMDDDSYFSFEI 180

Query: 187 YASRTGTSKKSNEVCYSNGNLFKNKGIYAKGVLHWLTDKDQIIAFDTEKELCLLISSPIP 246
           Y+S+ G  KKS E+C  N NLFKNKGI+  G+LHWLTD DQ+++F+ E EL  LIS+P P
Sbjct: 181 YSSQAGAWKKSKEICQCNHNLFKNKGIFVGGILHWLTDGDQVLSFNIENELSWLISAPFP 240

Query: 247 ALEFFINVPGTCIGESKGLLNFIMICEDGIIVWCLEDYFETKWTHKHWKQLQVIEEENPK 306
            +     +P  CIGES+G L++IMI EDG+ VW LEDY+++ W+  H   L+V+EEEN +
Sbjct: 241 TIHLTA-IPEMCIGESRGRLHYIMISEDGLQVWALEDYYDSNWSLVHSTTLEVMEEENSQ 300

Query: 307 LFFKLYKNMQQKRVAGMDPWMDPLAFKDEVLLMRVYSTFYFYHTETGKVVEVCNVTSLGP 366
           L +     + Q+      PWMDPLAFKD +LLMRV +    Y   T K+ E+CN++ LG 
Sbjct: 301 LLYNTRDRVAQRISIDSIPWMDPLAFKDGLLLMRVSTKIILYCIGTRKMEELCNLSKLGR 360

Query: 367 NPYVDPSAIPYSLSLVPLN 384
           N    P  IPYSL+L PL+
Sbjct: 361 NSIFGPLVIPYSLNLAPLS 376

[Close]
BLAST of Lsi06G011620 vs. TAIR10
Match: AT5G49610.1 (AT5G49610.1 F-box family protein)

HSP 1 Score: 71.6 bits (174), Expect = 1.2e-12
Identity = 74/309 (23.95%), Postives = 127/309 (41.10%), Query Frame = 1 

Query: 11  DIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQA--QFQKTGLMLSGFIFQEKYQKC 70
           ++   +L+RLP K+L   + V K WY+L SD+ F     Q      +L   +       C
Sbjct: 12  EVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQLSVKEQLLVAEVSDSSSLIC 71

Query: 71  LDDIRTFSYMPVNADSKVQKMVFGFLPEDVVILASCNGLVCCRSCFPTQHPTTIYVCNPL 130
           +D++R            V ++   F+ + V I  S NGL+CC S          YVCNP 
Sbjct: 72  VDNLR-----------GVSELSLDFVRDRVRIRVSSNGLLCCSS---IPEKGVYYVCNPS 131

Query: 131 ---FKKWVSFEVAQLDRF--SNIAMSFDPILDPINTSTNFKIVRIQQLENEQEELYYTFE 190
              ++K        + RF     A       D      N  +    +   ++ +  +   
Sbjct: 132 TREYRKLPKSRERPVTRFYPDGEATLVGLACDLSKNKFNVVLAGYHRSFGQRPDGSFICL 191

Query: 191 IYASRTGTSKKSNEVC--YSNGNLFKNKGIYAKGVLHWL-TDKDQIIAFDTEKELCLLIS 250
           ++ S +   +K   V    S  ++ KN+ ++  G+LHWL +    I+A D E ++   IS
Sbjct: 192 VFDSESNKWRKFVSVLEECSFTHMSKNQVVFVNGMLHWLMSGLCYILALDVEHDVWRKIS 251

Query: 251 SPIPALEFFINVPG---TCIGESKGLLNFIMICEDGIIVWCLEDYFETKWTHKHWKQLQV 307
            P    E  I   G     + ES G L+ I + +  + +W + +Y    W+      L+ 
Sbjct: 252 LPD---EIRIGNGGGNRVYLLESDGFLSVIQLSDVWMKIWKMSEYETETWSVVDSISLRC 303

[Close]
BLAST of Lsi06G011620 vs. TAIR10
Match: AT5G07610.1 (AT5G07610.1 F-box family protein)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-10
Identity = 59/231 (25.54%), Postives = 107/231 (46.32%), Query Frame = 1 

Query: 6   VMNAGDIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKT-GLMLSGFIFQEK 65
           V +  D+   +LS LP KTL+  + VSK W  LI++  F     +    L +SGF     
Sbjct: 31  VADIDDVLIQILSFLPIKTLLRFKRVSKRWLSLITNPVFSNRVIKSNHPLPISGFFLHSP 90

Query: 66  YQKCLDDIRTFSYMPVNADSKVQKMVFGFLP-------EDVVILASCNGLVCCR-SCFPT 125
            +        +S++ ++ D+  Q+ +   LP        D++I+ S NGL+ C+ SC  +
Sbjct: 91  RE------IKYSFVSLDDDATNQR-ISSSLPLWFTDHQTDMIIMQSTNGLLLCKCSCASS 150

Query: 126 QH-PTTIYVCNPLFKKWVSFEVAQLDRFSNIAMSFDPILDPINTSTNFKIVRIQQLEN-- 185
            H  T  YV NP  K++      Q+     ++++FDP     + S ++K+  ++   N  
Sbjct: 151 NHFNTNYYVYNPTTKQYTLLH--QIAGHIALSLAFDP-----SRSPHYKVFCLRGRSNNS 210

Query: 186 ----EQEELYYTFEIYASRTGTSKKSNEVCYSNGNLFK-NKGIYAKGVLHW 220
                  ELY+  E+Y+S  G  ++   V  S     + +  ++  G ++W
Sbjct: 211 FSSASDSELYH-IEVYSSNEGLWRRVVPVPTSPSTFIEFSYSVFWNGAVNW 246

[Close]
BLAST of Lsi06G011620 vs. TAIR10
Match: AT5G62660.1 (AT5G62660.1 F-box and associated interaction domains-containing protein)

HSP 1 Score: 63.5 bits (153), Expect = 3.3e-10
Identity = 66/298 (22.15%), Postives = 123/298 (41.28%), Query Frame = 1 

Query: 11  DIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKTGLMLSGFIFQEKYQKCLD 70
           D+  ++L++LPAK+L+  +CVSK W  LI  R F               ++       L 
Sbjct: 44  DLLIEILTKLPAKSLMRFKCVSKLWSSLIRSRFFSNCYLTVKTPRRPPRLYMSLVDHLLC 103

Query: 71  DIRTFSYMPV---------NADSKVQKM-VFGFLPEDVVILASCNGLVCCRSCFPTQHPT 130
           +     + P          +A+S  Q + + G    ++V+L      V CR+       T
Sbjct: 104 NSLMVCHYPCESVLLSSSSSAESLEQNLTIAGMGGRNMVVLRGLILYVVCRTASIYNPTT 163

Query: 131 TIYVCNPLFKKWVSFEVAQLDRFSNIA--MSFDPILDPINTSTNFKIV-RIQQLENEQEE 190
              V  P  K  +   +AQ   ++++     +DP+LD       +K+V  +       + 
Sbjct: 164 RQSVTLPAVKSNI---LAQKSHWNSLLYFFGYDPVLD------QYKVVCTVALFSKRLKR 223

Query: 191 LYYTFEIYASRTGTSKKSNEVCYSNGNLFKNKGIYAKGVLHWLTD----KDQIIAFDTEK 250
           +     ++    G S K  E  +   +L    G+   GV+++L      +D +++FD   
Sbjct: 224 ITSEHWVFVLEPGGSWKRIE--FDQPHLPTRLGLCVNGVIYYLASTWKRRDIVVSFDVRS 283

Query: 251 ELCLLISSPIPALEFFINVPGTCIGESKGLLNFIMICEDGII-VWCLEDYFETKWTHK 291
           E   +I  P+    F  +V     G    + ++ M+ + G++ +W LED    KW+ K
Sbjct: 284 EEFSMIQGPLKVSAFSESVGFIEYGGKPAVFDYTMMKQTGLVDLWVLED--AGKWSRK 328

[Close]
BLAST of Lsi06G011620 vs. TAIR10
Match: AT1G32420.1 (AT1G32420.1 F-box and associated interaction domains-containing protein)

HSP 1 Score: 59.7 bits (143), Expect = 4.8e-09
Identity = 64/286 (22.38%), Postives = 115/286 (40.21%), Query Frame = 1 

Query: 11  DIPFDVLSRLPAKTLIEMRCVSKEWYQLISDR-----SFVQAQFQKTGLMLSGFIFQEKY 70
           D+  ++L +LPAK+L+  +CVSK+W  +IS R     S V     +        IF  + 
Sbjct: 40  DLTVEILKKLPAKSLLRFQCVSKQWLSIISSRRDFIDSIVTRSLTQPPPRDIKLIFHHQV 99

Query: 71  QKCLDDIRTF-SYMPVNADSKVQKMVFGFLPEDVVILAS----CNGLVCCRSCFPTQHPT 130
                    F S  P N D            E +   AS      GL+CC S      PT
Sbjct: 100 LYPGPHFFIFSSTYPQNTDK-----------ESLTTRASSYHYVRGLICCWS----HCPT 159

Query: 131 TIYVCNPLFKKWVSFEVAQLDRFSNIAMSFDPILDPINTSTNFKIVRIQQLENEQEELYY 190
           T+ + NP  +++  + V   +R+  I   F    DP+     +K++ + +   E+     
Sbjct: 160 TVDIYNPTTRQY--YTVPDTNRYQYIETCFFG-YDPV--ENQYKVMVLPKYYMEESPC-- 219

Query: 191 TFEIYASRTGTSKKSNEVCYSNGNLFKNKGIYAKGVLHWLTDKDQ-----IIAFDTEKEL 250
             +++       K   ++     +      +   GV+++    +      +++FD   E 
Sbjct: 220 --QVFTVGDPIEKPWRDIQGIGVHFLLKDAVCINGVIYYQATNEYGSTYFLVSFDVRSEK 279

Query: 251 CLLISSPIPALEFFINVPGTCIGESKGLLNFIMICEDGIIVWCLED 282
              + +P    +   + P T I   +G L  IM C+ G+ +W +ED
Sbjct: 280 FNHVKAP----KILTDHPCTLI-NYQGKLGLIMCCKKGLEIWVMED 296

[Close]
BLAST of Lsi06G011620 vs. TAIR10
Match: AT3G23970.1 (AT3G23970.1 F-box family protein)

HSP 1 Score: 58.2 bits (139), Expect = 1.4e-08
Identity = 64/252 (25.40%), Postives = 102/252 (40.48%), Query Frame = 1 

Query: 11  DIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKTGLMLSGFIFQEKYQKCLD 70
           ++ F+VL RLP K+L   R V KEW  +I    F           +S  I Q +  K   
Sbjct: 6   ELTFEVLVRLPLKSLARFRSVRKEWKLVIDSEFFRDCFMSHNSSSVSWSIIQTRPHKLTL 65

Query: 71  DIRTFSYMPVNADSKVQKMVFGFLPEDVV----ILASCNGLVCCRSCFPTQHPTTI-YVC 130
           +I           ++    + GF  +  +    +LA  +GLV   +   T + T + YV 
Sbjct: 66  EIVGHHGCKTWGLTRSPGSLVGFFADTTIKRLRVLACTDGLVLIYT--ETSYGTPMHYVG 125

Query: 131 NPLFKKWVS------FEVAQLDRFSNIAMSFDPIL---DPINTSTNFKIVRIQQLENEQE 190
           NPLF++W        F +  ++R  N     D  L          ++K+V +      + 
Sbjct: 126 NPLFQEWCPIPLPSYFYLQSVERIRNHQRFNDSALVIKMQSGAVVSYKVVWL----FPRN 185

Query: 191 ELYYTFEIYASRTGTSKKSNEVCYSNGNLFK-NKGIYAKGVLHWLTD-KDQIIAFD---- 243
                F IY+S TG  +     C  +   F  +K I   G+LHWL +     +A+D    
Sbjct: 186 STTIDFLIYSSDTGMWEARIATCLHSSFWFSHHKPIALNGILHWLCNFSTSFVAYDFYGG 245

[Close]
BLAST of Lsi06G011620 vs. NCBI nr
Match: gi|659086631|ref|XP_008444037.1| (PREDICTED: F-box protein At5g07610-like [Cucumis melo])

HSP 1 Score: 685.3 bits (1767), Expect = 6.6e-194
Identity = 328/394 (83.25%), Postives = 363/394 (92.13%), Query Frame = 1 

Query: 7   MNAGDIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKTGLMLSGFIFQEKYQ 66
           MNAGDI FDVLSRLP KTL+EMR VSK W +LI D  FVQAQFQK+GL LSGF+FQEKYQ
Sbjct: 1   MNAGDILFDVLSRLPTKTLLEMRLVSKAWDRLILDPLFVQAQFQKSGLALSGFMFQEKYQ 60

Query: 67  KCLDDIRTFSYMPVNADSKVQKMVFGFLPEDVVILASCNGLVCCRSCFPTQHPTTIYVCN 126
           KCLDDI+TF+YMP++ADSKVQKMVFGFLPEDVVIL SCNGLVCCRS F T+  TTIYVCN
Sbjct: 61  KCLDDIKTFTYMPIDADSKVQKMVFGFLPEDVVILQSCNGLVCCRSGFRTRQSTTIYVCN 120

Query: 127 PLFKKWVSFEVAQLDRFSNIAMSFDPILDPINTSTNFKIVRIQQLENEQEELYYTFEIYA 186
           PLFKKWVSFEVAQLDRFSNIA++FDPIL+P+ T+TNFK+VRIQQLENEQEE+YYTFEIY+
Sbjct: 121 PLFKKWVSFEVAQLDRFSNIALAFDPILNPVITATNFKVVRIQQLENEQEEMYYTFEIYS 180

Query: 187 SRTGTSKKSNEVCYSNGNLFKNKGIYAKGVLHWLTDKDQIIAFDTEKELCLLISSPIPAL 246
           S TGT K+SNEVCYS+GNL KNKGIYAKGVLHWLTD DQI+AFDTEKEL LL+ SPIPAL
Sbjct: 181 SETGTWKESNEVCYSDGNLLKNKGIYAKGVLHWLTDTDQILAFDTEKELSLLMPSPIPAL 240

Query: 247 EFFINVPGTCIGESKGLLNFIMICEDGIIVWCLEDYFETKWTHKHWKQLQVIEEENPKLF 306
           E FIN PGTCIGES+GLL+FI+ICEDGIIVWCL+DYFETKWTHKH KQLQVIE+ENP +F
Sbjct: 241 EMFINPPGTCIGESRGLLHFIVICEDGIIVWCLDDYFETKWTHKHSKQLQVIEDENPNMF 300

Query: 307 FKLYKNMQQKRVAGMDPWMDPLAFKDEVLLMRVYSTFYFYHTETGKVVEVCNVTSLGPNP 366
           F+LYKNMQ+KRVAGMDP MDPLAFKDEVLLMRVYST YFYHTET KV+EVC+V SLGPNP
Sbjct: 301 FQLYKNMQEKRVAGMDPCMDPLAFKDEVLLMRVYSTIYFYHTETSKVMEVCSVASLGPNP 360

Query: 367 YVDPSAIPYSLSLVPLNISLSQSDSNSTRNPSEN 401
           YVDPSAIPYSLSL+PLN+SLSQSDSN+  NPS+N
Sbjct: 361 YVDPSAIPYSLSLIPLNVSLSQSDSNNNTNPSKN 394

[Close]
BLAST of Lsi06G011620 vs. NCBI nr
Match: gi|778665066|ref|XP_004146726.2| (PREDICTED: F-box protein At5g07610-like [Cucumis sativus])

HSP 1 Score: 651.0 bits (1678), Expect = 1.4e-183
Identity = 312/397 (78.59%), Postives = 352/397 (88.66%), Query Frame = 1 

Query: 8   NAGDIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKTGLMLSGFIFQEKYQK 67
           NAGDI FDVLSRLP KTL+EMR VSK W++LI DRSFVQAQFQK GL LSGF+FQEKY+K
Sbjct: 3   NAGDILFDVLSRLPTKTLLEMRFVSKAWHRLILDRSFVQAQFQKCGLALSGFMFQEKYRK 62

Query: 68  CLDDIRTFSYMPVNADSKVQKMVFGFLPEDVVILASCNGLVCCRSCFPTQHP----TTIY 127
           C  DI TF+YMP++ADSKVQKMVFGFLPEDVVIL SCNGLVCCRSCF TQH     TTIY
Sbjct: 63  CPIDISTFTYMPIDADSKVQKMVFGFLPEDVVILQSCNGLVCCRSCFRTQHSTTHSTTIY 122

Query: 128 VCNPLFKKWVSFEVAQLDRFSNIAMSFDPILDPINTSTNFKIVRIQQLENEQEELYYTFE 187
           VCNPLFKKWVSFEVAQLD FS+IA++FDPILDP+NT+TNFK+VRIQQLENEQEE+YYTFE
Sbjct: 123 VCNPLFKKWVSFEVAQLDSFSSIALAFDPILDPVNTATNFKVVRIQQLENEQEEMYYTFE 182

Query: 188 IYASRTGTSKKSNEVCYSNGNLFKNKGIYAKGVLHWLTDKDQIIAFDTEKELCLLISSPI 247
           IY+S TGT K+S+EVCYS+GNL KN G YAKGVLHWLTD DQI+AFDTEKEL LL+ SPI
Sbjct: 183 IYSSETGTWKESSEVCYSDGNLLKNNGTYAKGVLHWLTDTDQILAFDTEKELSLLVPSPI 242

Query: 248 PALEFFINVPGTCIGESKGLLNFIMICEDGIIVWCLEDYFETKWTHKHWKQLQVIEEENP 307
           PALE FI+ PGTCIGESKGLL+FIMICEDGIIVWCL+DYFE KWT KH KQLQ+IE+ENP
Sbjct: 243 PALEMFIDAPGTCIGESKGLLHFIMICEDGIIVWCLDDYFEAKWTLKHSKQLQMIEDENP 302

Query: 308 KLFFKLYKNMQQKRVAGMDPWMDPLAFKDEVLLMRVYSTFYFYHTETGKVVEVCNVTSLG 367
            +FFKLYK MQ++R+ GM+P+MDP AFKDEVLLMRV+ST YFYH ETGKVVEVCNV SLG
Sbjct: 303 NMFFKLYKIMQRRRLPGMEPYMDPWAFKDEVLLMRVFSTVYFYHIETGKVVEVCNVASLG 362

Query: 368 PNPYVDPSAIPYSLSLVPLNISLSQSDSNSTRNPSEN 401
           PN +V P  IPYSLSL+PL++SLS+SD N+  NP+EN
Sbjct: 363 PNAFVSPPVIPYSLSLIPLDVSLSRSDPNNNTNPNEN 399

[Close]
BLAST of Lsi06G011620 vs. NCBI nr
Match: gi|703064025|ref|XP_010087099.1| (F-box protein [Morus notabilis])

HSP 1 Score: 412.9 bits (1060), Expect = 6.3e-112
Identity = 213/403 (52.85%), Postives = 287/403 (71.22%), Query Frame = 1 

Query: 1   MEKFRVMNAGDIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKTGLMLSGFI 60
           M K R +N  DI F+VLS+LP K L+ ++CVSK W  LISDR F+QAQ +KT L +SGFI
Sbjct: 1   MGKARYLN-DDIFFNVLSQLPTKILVGLKCVSKGWKSLISDRRFIQAQLRKTELTVSGFI 60

Query: 61  FQEKYQKCLDDIRTFSYMPVNADS-KVQKMVFGFLPEDVVILASCNGLVCCRSCFPTQHP 120
           FQEK+Q   +DI+T SY+PV  +S +V++ VF FLPED+V+LASC+GLVCCRSCFPT+ P
Sbjct: 61  FQEKFQWYEEDIKTVSYIPVGKESFEVKQSVFDFLPEDIVVLASCDGLVCCRSCFPTEDP 120

Query: 121 TTIYVCNPLFKKWVSFEVAQLDRFSNIAMSFDPILDPINTSTNFKIVRIQQLENEQ--EE 180
             IY+CNP+ K++V+   A LDR S++A++FDP  + ++TSTNFK+VR QQ E E+  E+
Sbjct: 121 A-IYICNPVNKEFVTLRCAGLDRDSSVALAFDPSQELVDTSTNFKVVRAQQFEIEEGEED 180

Query: 181 LYYTFEIYASRTGTSKKSNEVCYSNGNLFKNKGIYAKGVLHWLTDKDQIIAFDTEKELCL 240
           LY+TFEIY+S+ G  +KSNE+C  N +L KNKGIY  G+LHWLTD D I+ FD+EKEL  
Sbjct: 181 LYFTFEIYSSKAGEWRKSNEICKCNTSLSKNKGIYIGGILHWLTDGDNILTFDSEKELSW 240

Query: 241 LISSPIPALEFFINVPGTCIGESKGLLNFIMICEDGIIVWCLEDYFETKWTHKHWKQLQV 300
           LIS P+PA EF  ++P  CIGES G L+++MI E+G+ +WCLEDYFE+KW  K+ K L+ 
Sbjct: 241 LISVPVPASEFK-SIPQACIGESDGRLHYVMISEEGLHLWCLEDYFESKWALKYSKPLRT 300

Query: 301 IEEENPKLFFKLYKNMQQKRVAGMDPWMDPLAFKDEVLLMRVYSTFYFYHTETGKVVEVC 360
           +E+E+P+L   L++ +         PW++PLAFKD +LLM V +  Y YH ET K+  VC
Sbjct: 301 MEKEHPRLLCNLHERVMSV-YDTETPWVNPLAFKDGLLLMIVSAKIYLYHFETSKMQVVC 360

Query: 361 NVTSLGPNPYVDPSAIPYSLSLVPLNISLSQSDSNSTRNPSEN 401
               LG +    P+ +PYS+SLVPL   LS  D +   N   N
Sbjct: 361 EAFKLGSSSIFFPTVLPYSMSLVPL---LSTVDDSVAGNKLTN 396

[Close]
BLAST of Lsi06G011620 vs. NCBI nr
Match: gi|566206021|ref|XP_006374274.1| (hypothetical protein POPTR_0015s05590g [Populus trichocarpa])

HSP 1 Score: 386.3 bits (991), Expect = 6.3e-104
Identity = 192/378 (50.79%), Postives = 263/378 (69.58%), Query Frame = 1 

Query: 11  DIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKTGLMLSGFIFQEKYQKCLD 70
           DIPFDVLSRL  K L+ ++CVSK W  LISDRSF+QAQ QK    LSGF FQ++++ C D
Sbjct: 10  DIPFDVLSRLQTKDLLGLKCVSKGWKDLISDRSFIQAQSQKKE-PLSGFFFQQRHRYCPD 69

Query: 71  DIRTFSYMPVNADSKVQKMVFGFLPEDVVILASCNGLVCCRSCFPTQHPTTIYVCNPLFK 130
           DI+T +Y PV  + ++Q+ VF FLP+DVV+LA CNGLVCCRSC+P + P  IYVCNPL  
Sbjct: 70  DIKTITYFPVERN-RLQQDVFAFLPQDVVVLALCNGLVCCRSCYPFEDPA-IYVCNPLNS 129

Query: 131 KWVSFEVAQLDRFSNIAMSFDPILDPINTSTNFKIVRIQQLENEQEELYYTFEIYASRTG 190
           +W   +  +  + S IA++F+P  D     TNFK+VR +Q E EQEE Y++FEIYASRT 
Sbjct: 130 EWWKLDWKEPGKESFIALAFNPFQDISVNLTNFKVVRPRQFETEQEEAYFSFEIYASRTR 189

Query: 191 TSKKSNEVCYSNGNLFKNKGIYAKGVLHWLTDKDQIIAFDTEKELCLLISSPIPALEFFI 250
             K S EVC+ + +L KN+GI++ G+LHWLTD DQI+ F+ E EL LLIS+P+PA EF  
Sbjct: 190 NWKLSKEVCWCDNSLSKNEGIFSGGILHWLTDGDQILTFNVENELALLISTPLPAGEFNT 249

Query: 251 NVPGTCIGESKGLLNFIMICEDGIIVWCLEDYFETKWTHKHWKQLQVIEEENPKLFFKLY 310
             P  CIGES+G L +++I E+G+ VW LEDYF++ W+ K+ K L  IE+E+  +   LY
Sbjct: 250 R-PHACIGESEGQLYYVLISEEGLHVWVLEDYFDSTWSLKYSKTLAQIEKEHSDIMINLY 309

Query: 311 KNMQQKRVAGMDPWMDPLAFKDEVLLMRVYSTFYFYHTETGKVVEVCNVTSLGPNPYVDP 370
             +   +     PWMDPLAFKD VL++R+ +T Y YH +T K+ EV   +  G   +V P
Sbjct: 310 NRVMLWQRIDDRPWMDPLAFKDGVLVVRISNTIYLYHVDTSKMEEVGETSKFGAMSWVSP 369

Query: 371 SAIPYSLSLVPLNISLSQ 389
             +PY++SLVPL +++++
Sbjct: 370 IVLPYTMSLVPLGLNIAR 383

[Close]
BLAST of Lsi06G011620 vs. NCBI nr
Match: gi|743908604|ref|XP_011047758.1| (PREDICTED: putative F-box protein At1g20795 [Populus euphratica])

HSP 1 Score: 385.6 bits (989), Expect = 1.1e-103
Identity = 193/376 (51.33%), Postives = 261/376 (69.41%), Query Frame = 1 

Query: 11  DIPFDVLSRLPAKTLIEMRCVSKEWYQLISDRSFVQAQFQKTGLMLSGFIFQEKYQKCLD 70
           DIPFDVLSRL  K L+ ++CVSKEW  LISDRSF+QAQ QK    LSGF FQ++++ C D
Sbjct: 10  DIPFDVLSRLQTKDLLGLKCVSKEWKDLISDRSFIQAQSQKKE-PLSGFFFQQRHRYCPD 69

Query: 71  DIRTFSYMPVNADSKVQKMVFGFLPEDVVILASCNGLVCCRSCFPTQHPTTIYVCNPLFK 130
           DI+T +Y PV   +++Q+ VF FLP+DVV+LASCNGLVCCRSC+P + P  IYVCNPL  
Sbjct: 70  DIKTITYFPVER-TRLQQDVFAFLPQDVVVLASCNGLVCCRSCYPFEDPA-IYVCNPLNS 129

Query: 131 KWVSFEVAQLDRFSNIAMSFDPILDPINTSTNFKIVRIQQLENEQEELYYTFEIYASRTG 190
           +W   +  +  + S IA++F+P  D     TNFK+VR +Q E EQEE Y++FEIYASRT 
Sbjct: 130 EWWKLDWKEPGKESFIALAFNPFTDISVNLTNFKVVRPRQFETEQEEAYFSFEIYASRTR 189

Query: 191 TSKKSNEVCYSNGNLFKNKGIYAKGVLHWLTDKDQIIAFDTEKELCLLISSPIPALEFFI 250
             K S EVC+ + +L KN+GI++ G+LHWLTD DQI+ F+ E EL  LIS+P+PA E F 
Sbjct: 190 NWKLSKEVCWCDKSLSKNEGIFSGGILHWLTDGDQILTFNVENELAWLISTPLPAGE-FN 249

Query: 251 NVPGTCIGESKGLLNFIMICEDGIIVWCLEDYFETKWTHKHWKQLQVIEEENPKLFFKLY 310
           + P  CIGES+G L +++I E+G+ VW LEDYF++ W+ K+ K L  IE+E+  +   LY
Sbjct: 250 STPQACIGESEGQLYYVLISEEGLHVWVLEDYFDSTWSLKYSKTLAQIEKEHSGVMINLY 309

Query: 311 KNMQQKRVAGMDPWMDPLAFKDEVLLMRVYSTFYFYHTETGKVVEVCNVTSLGPNPYVDP 370
             +   +     PWMDPLAFKD VL++R+ +T + YH +T K+ EV   +  G   +V P
Sbjct: 310 NRVMLWQRIDDRPWMDPLAFKDGVLVVRISNTIHLYHVDTSKIEEVGETSKFGAMSWVSP 369

Query: 371 SAIPYSLSLVPLNISL 387
             +PY++SLVPL   L
Sbjct: 370 IVLPYTMSLVPLGRKL 381

The following BLAST results are available for this feature:
BLAST of Lsi06G011620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FB341_ARATH2.2e-1123.95F-box protein At5g49610 OS=Arabidopsis thaliana GN=At5g49610 PE=1 SV=1[more]
FB253_ARATH2.0e-0925.54F-box protein At5g07610 OS=Arabidopsis thaliana GN=At5g07610 PE=2 SV=1[more]
FB299_ARATH5.9e-0922.15Putative F-box protein At5g62660 OS=Arabidopsis thaliana GN=At5g62660 PE=3 SV=1[more]
FB30_ARATH8.5e-0822.38Putative F-box protein At1g32420 OS=Arabidopsis thaliana GN=At1g32420 PE=3 SV=1[more]
FB183_ARATH2.5e-0725.40Putative F-box protein At3g23970 OS=Arabidopsis thaliana GN=At3g23970 PE=3 SV=1[more]
BLAST of Lsi06G011620 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LW82_CUCSA9.6e-18478.59Uncharacterized protein OS=Cucumis sativus GN=Csa_1G269910 PE=4 SV=1[more]
W9QCJ9_9ROSA4.4e-11252.85F-box protein OS=Morus notabilis GN=L484_010471 PE=4 SV=1[more]
B9N360_POPTR4.4e-10450.79Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s05590g PE=4 SV=1[more]
A9P8R5_POPTR2.2e-10351.33Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s05590g PE=2 SV=1[more]
D7U4A6_VITVI4.1e-10249.34Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0044g01730 PE=4 SV=... [more]
BLAST of Lsi06G011620 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G49610.11.2e-1223.95 F-box family protein[more]
AT5G07610.11.1e-1025.54 F-box family protein[more]
AT5G62660.13.3e-1022.15 F-box and associated interaction domains-containing protein[more]
AT1G32420.14.8e-0922.38 F-box and associated interaction domains-containing protein[more]
AT3G23970.11.4e-0825.40 F-box family protein[more]
BLAST of Lsi06G011620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659086631|ref|XP_008444037.1|6.6e-19483.25PREDICTED: F-box protein At5g07610-like [Cucumis melo][more]
gi|778665066|ref|XP_004146726.2|1.4e-18378.59PREDICTED: F-box protein At5g07610-like [Cucumis sativus][more]
gi|703064025|ref|XP_010087099.1|6.3e-11252.85F-box protein [Morus notabilis][more]
gi|566206021|ref|XP_006374274.1|6.3e-10450.79hypothetical protein POPTR_0015s05590g [Populus trichocarpa][more]
gi|743908604|ref|XP_011047758.1|1.1e-10351.33PREDICTED: putative F-box protein At1g20795 [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044267 cellular protein metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G011620.1Lsi06G011620.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF00646F-boxcoord: 15..44
score: 5.
IPR001810F-box domainunknownSSF81383F-box domaincoord: 12..54
score: 1.31
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 14..55
score: 1.
NoneNo IPR availablePANTHERPTHR32133FAMILY NOT NAMEDcoord: 11..304
score: 8.7E-138coord: 320..384
score: 8.7E
NoneNo IPR availablePANTHERPTHR32133:SF159SUBFAMILY NOT NAMEDcoord: 11..304
score: 8.7E-138coord: 320..384
score: 8.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi06G011620Csa1G269910Cucumber (Chinese Long) v2culsiB078
Lsi06G011620CSPI01G17600Wild cucumber (PI 183967)cpilsiB075
Lsi06G011620Cucsa.351010Cucumber (Gy14) v1cgylsiB565
Lsi06G011620CmaCh10G004750Cucurbita maxima (Rimu)cmalsiB066
Lsi06G011620CmoCh10G005060Cucurbita moschata (Rifu)cmolsiB053
Lsi06G011620MELO3C010232Melon (DHL92) v3.5.1lsimeB402
Lsi06G011620MELO3C010232.2Melon (DHL92) v3.6.1lsimedB423
Lsi06G011620Bhi02G000696Wax gourdlsiwgoB503
Lsi06G011620Cp4.1LG18g05640Cucurbita pepo (Zucchini)cpelsiB307
Lsi06G011620CsGy1G017790Cucumber (Gy14) v2cgyblsiB071
Lsi06G011620Carg09989Silver-seed gourdcarlsiB117
Lsi06G011620CsaV3_1G028850Cucumber (Chinese Long) v3cuclsiB085
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi06G011620Watermelon (97103) v2lsiwmbB372
Lsi06G011620Watermelon (97103) v2lsiwmbB380
Lsi06G011620Wax gourdlsiwgoB500
Lsi06G011620Cucumber (Gy14) v1cgylsiB440
Lsi06G011620Cucurbita maxima (Rimu)cmalsiB131
Lsi06G011620Cucurbita maxima (Rimu)cmalsiB447
Lsi06G011620Cucurbita moschata (Rifu)cmolsiB121
Lsi06G011620Cucurbita pepo (Zucchini)cpelsiB567
Lsi06G011620Wild cucumber (PI 183967)cpilsiB301
Lsi06G011620Cucumber (Chinese Long) v2culsiB301
Lsi06G011620Melon (DHL92) v3.5.1lsimeB424
Lsi06G011620Watermelon (Charleston Gray)lsiwcgB370
Lsi06G011620Watermelon (Charleston Gray)lsiwcgB379
Lsi06G011620Watermelon (97103) v1lsiwmB404
Lsi06G011620Watermelon (97103) v1lsiwmB421
Lsi06G011620Melon (DHL92) v3.6.1lsimedB444
Lsi06G011620Silver-seed gourdcarlsiB461
Lsi06G011620Cucumber (Chinese Long) v3cuclsiB321