Lsi06G009930 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi06G009930
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr06 : 19962367 .. 19967477 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGCTCAAGGCAAGGCTGCTTTCCCGGCGGTGTCTGCGGTTAAGGTTTGAAGAAGGGACTTCAGTTATGCCTTGTTCTCTGTGTGTGCGCCCCTTCCTTAATTTTCTCCTCTCTCTTCTCTTTCTAACAAACAAACATTACTCTTTTTTTCACATTAATTGTTTTTAATCCATCTTTATTATTTTAAAATGTTTATCTCAACACACTAATTCTCTAATCAAAAAACTAAACCCTAATTCATTCATTCTTCTTCTTTTTTTCCCACTCTTTTTTCAAATATTATTACATCATATAGGGACTAATGTGGAGATAATTCGAGAGATCTGATTAATGTACAAATGAATATCTAATGTGGGGATAATTAATGTACAAATTAATACAAGTTCTTTTAATTAAGATAGAGGAATGAAGAAGAAAAGAAATTATAAACATCTCAACTCGAAATATTGATTGCATTCTATGTTTAAAATGACTTTTCAAATGTTTGAAAGAACATTTTTAAGTATAAAACAAAGTATGTGTTCCTTAAGCACCTAGAAAAGTCATTACTTTTAAATGTTTTTCCACTTACCTCTTCGATGTGAGCATATATATATATATATATAGCTCAACAAGTAATAGGCATTTACTAATTTACTTGTGGTTGAAAGTTCAAATTATCATATTCCTACATACTAAACAAAAATTATTTTTTAAAAAATGAAAAATATGTGACCCTTCATATCAATCATTAAACTACCTCATGCAAAGAAAGAAAAATATATACATATAAAAAAATGAAAAATAAAATTCAACAATTCCCTTAATATAGGTAGATAATTAATTATTCCAACATTATATTTATAAACACACACAACTCAACTAGGCCAACAAAACACCAACCAAATAATTCAATACAAGATAATATAATGTAAACACATATTCTAATCGTTATTATAGAAGGCGAGGGTAATAAGCCAACTATCTTATTCTCTCTTTGACATAGGTTTAATCAAATGGAACAACCACTTATGAAAAAGTGGCCATTAAAATAATATTAGTCCTAGAAAGAGAGGCATAATCAAAACAATTCTTTTTTTTTTTTTTTTTTTTTAAGATTTTTCCTTTTTTTTTTTTTTTTTTTTTAAGATTTTTCCTTTTTTTTTTTTTTTTTTTTTAAGATTTTTCCTTTTTTTTTTTTTTTTTTTTTAAGATTTTTCCTTTTTTTTTTTTTTTTTTTTTAAGATTTTTCCTTTTTTTTTTTTTTTTTTTTTAAGATTTTTCCTTTTTTTTTTTTTTTTTTTTTAAGATTTTTCCTTTTTTTTTTTTTTTTTTTTTCCTTTTTGGTGGAAGAATATTTCAGATGCATGCGCTATGGTTTTAATTGAGTACAAATTAAGCATGAGAGGAAGGAAAAAAAAACCCTAAAGTAAAGTGTGTTGTTATTCCCCTTCACATCATTTCCCTCACCTTCTTCAACCCCATCCCCCAAGGAAAGGCCCTTAAAACCCTACACAAACCCCATTATAAACATCCCATTTCTTCTTCCTTCTCTTCATTATTCCCTCTTTCCTTTTTTTTTTTTTTTTTTTTTAATTTCTCTTATGACCCATCATTTCATATATATACACACAAAAGTTAAATTTCATTACTATTCTCATGTCCTTTTTGGGCCCAAATTTGAGCTCCCTTTCACAACTCCATTATTCTTTCAAATATCATTTCACTCTTTTTTATGGTCTAAATTCAAATCTTAGGTTTATGTAAATTTATATGCTTTTTATCCCATTATTAATTGTAATAACCCTATCTATATTATTGATCTATACATGTATCTCTTTATTATTCTTCCCCACCACCACCCAACAAAACCACCAACTCTCTACCTCCTCCTACTCCCACCTCACTCACCCTACTTTTTTTTTCTTTTCTTTTCTTTTTTTTCATCTAAAAACATTCCATTTGTTTATTTCCCACCTAAAAATAATTAAATAAAAAAACTTACTAAAAAAAAATTATTCATTTTGTTCTCCTTTTTGGTGCCTGAAAATGGGTCCAATTTTCTGGTATTGTTTCACTCAATAATTCTTTCTTCTTTTTGGTTGGTAAGTGGACACCTTTTCATACCCAAAAAGAAAATTTTCTTTGCTTAACATAACACCCTCTCTCACCTTTCCCTCTCCTTCTTGTCTATTGGTTTTTTTTTTTTTTTTTTAAAGATTCATGATTGTTTTTTCTTTTCCTTTTCTCTGTGTGTTTCTACTGTTTTGATCTGCATATATACATATGTGTTTTTGTGTAGTAAAGGATGAAGCTGAGAGGATTTCGTATGAAAATCGGAAAGCGATATTGGTGAGGTTCAATCCGAAGATGGATTTTACAACGATTGTGAAGTACGATCTCTGATTGAGCCGCGCCAATATCACTTTTCTTCTTCTTTAGGACTTCCATTTCATTTTAACCCTAATTTTTCGTTTTTCCATTGTTTTTTCCAACATGGGTAGAGATCAAGAGGAGTTAGAATATGTGACCTCATGGTTTGACATCTATCTTAACTAATTGAATACTATATATGCAGGTTAGTTTTTGTTTTTCGACTGGTATAGCAGATCATCATTGTCATCAACACGATGCGTTTTTAATCTAAAACGGGTTGTGTCACAAACACGTACGCCATGAGCTATTGAATTCGGATTTTTAAAGAACATCAAGCTCTTTCAGGTATGTCAATGATATGCTACTATTTAATTGTACTGTCTTTATATATGTGAATGCATGAATATATTATATATACAAAATGTGAATTGAAGTTCCAATTAGAATAATTCTGTCTTTTAATTCTTTCCTCTCTTCCTTTCTTGAACTTGGTAGATTGAGTTGGACAATAATAACACAATATATATCAAATTTTAATCCTGAAATGAGATATCTTAAAATTGAATATTCAAATCCAAATCATTTCTACTTATAATATAAATTAATTTGGACAAGCTTTTACATATATTATCTATTGTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTGTCCTTTTCCTTTTAGATTTGGTGTTTTTTTTAGTAGCCTTTCTGTTAGTATTTCAAAATCAAGCTTGAAAGATAGTTCTAAATACTATTCTTTACGATCCTGGATATTATTATTGTGGTAATCAATACTTAACTAGTTGCTTATTATTTGTTAAATGTATAGCTGTGTAATGCACTGTGCATAAATTTTTCTTGATGCATTATAATATTTATTTTAAAGCTAAATTACTCTTAATCAGTGATCAACTTGTTAATTGGCGTACAAATTAATGTGGGCTTAAGTGTATTTCATACTGTCTTCTTCATCTTCATCATTTTTCTTTTATTTCCTTTTGAGCTAATAACTAAATATAATAATAGATAAATAAACATTTGAAAAAGATCTGTTTGGAAAGTTTAACTAAACAAATACTTCATATCTGAAAAAGAAATCATTTTCCAAAAACATAACAAAATAACTTGAGAAATAGGTGTTCTAATGAAATACAATACTAGTCAACCACAATGTCACACAAATAAGATGTGAGAAAGAATACCCGACAGTAAAATAAAAGAGAAGCTAAACGCACAAAAAATTGGTAATCCAATTTAGTGTAATTACACAACACACCTACGTCCGGGGATAATGTGTTCGATGAAAAGAACTTCACTAAAAGAGTTAAGCATTTACAATGAAAACTTATATGATAGTATACAACTATCTTGACTCCAAAGAGCTTACTCCTAATGAAGAGTTTAAGCCCCCTAAACTTGAGACTCCTTCTCTTGGTGCAACGTTAGTCTTCTCATCTCATGTTTGCTTACGTACCACCTAAAAGTGAGATCCTCTCACCAATCTTCAACTTTGACTCAACTAAGTAAGGATCAATCCAATAACTTCTTTAATGAATAAACATAAAAAGGTAAACTTTCAATCGTACGCTAAGAGCATAAGAACACAGCCTCATCACCACGAGGAAGAATACACTTTATCACACACAATGATTATTCTTTTTCCACAACGAAACTTCTAAAGTGCTAATCCTAAAAATGAAGATAATACGATAACTGCAGCAAGAAGCACGATCGACAATCCACAAAATCTGAGCTAACGTGATCTATTAAGTTCTTCCTTCTCCATTCACTAAAGTGAGCCCTCGGATGAATTTGAAACCCGCAATGTAACTTGACCTTGTGGCTCCTCTTCTACGATTTCATCCACTTATCGTGCCAGGTGATGAGGATCAACTTATTGTATAGGATCCACTTGTTTTGTCAGGCCATGATGATCGACTTGCTATGTCGGGCCATGAGGATCGACTTGCTGTGTCGGGCCATGAGGAACAACTTGCTATGTCGGGCCATAAGGATCGACTTGTTACTTGGCGATGAGGATCAACTTGCTATGCACGATCAACTTGTTGTGTCGAGTCATGAGGATTGACTTGTTGTGTTGGGCCATAAGGATCAACTTGTTGTGCTGGGCCATGAGGATCAACTTGCTGTGCAAGATCGACTTGTTATGCCGGACACCAGGATGGACTTGCTTGACAAGCAACCACGATGGACTTGTTGTGTGGAGCCTCACCACGCCGGTTGTGCTGGGGGAAACGTCTTGCCACGTTGGTGGTGTTGGGGAGTACCTTGTCACACCAGTGGTACTAGGAGGGTCGTCGTGGTGCTTCCGTGGGTGGTGTCTGAGGAAGATATTGGCGTCGAAGTGTCGGTGATGCTAGTGCTTCAAGATATGTGCCAATAGGTGGTGGTCTCGGGGGAGGATTTCGATGTGTCGGTGAGGCTAGTGCTTCAAGATATATATGTACTAATAGGTGGTCATTTCGGGGGAGGTTTCCGG

mRNA sequence

ATGGAGGCTCAAGGCAAGGCTGCTTTCCCGGCGGTGTCTGCGGTTAAGGCCATGATGATCGACTTGCTATGTCGGGCCATGAGGATCGACTTGCTGTGTCGGGCCATGAGGAACAACTTGCTATGTCGGGCCATAAGGATCGACTTGTTACTTGGCGATGAGGATCAACTTGCTATGCACGATCAACTTGTTGTGTCGAGTCATGAGGATTGACTTGTTGTGTTGGGCCATAAGGATCAACTTGTTGTGCTGGGCCATGAGGATCAACTTGCTGTGCAAGATCGACTTGTTATGCCGGACACCAGGATGGACTTGCTTGACAAGCAACCACGATGGACTTGTTGTGTGGAGCCTCACCACGCCGGTTGTGCTGGGGGAAACGTCTTGCCACGTTGGTGGTGTTGGGGAGTACCTTGTCACACCAGTGGTACTAGGAGGGTCGTCGTGGTGCTTCCGTGGGTGGTGTCTGAGGAAGATATTGGCGTCGAAGTGTCGGTGATGCTAGTGCTTCAAGATATGTGCCAATAGGTGGTGGTCTCGGGGGAGGATTTCGATGTGTCGGTGAGGCTAGTGCTTCAAGATATATATGTACTAATAGGTGGTCATTTCGGGGGAGGTTTCCGG

Coding sequence (CDS)

ATGGAGGCTCAAGGCAAGGCTGCTTTCCCGGCGGTGTCTGCGGTTAAGGCCATGATGATCGACTTGCTATGTCGGGCCATGAGGATCGACTTGCTGTGTCGGGCCATGAGGAACAACTTGCTATGTCGGGCCATAAGGATCGACTTGTTACTTGGCGATGAGGATCAACTTGCTATGCACGATCAACTTGTTGTGTCGAGTCATGAGGATTGA

Protein sequence

MEAQGKAAFPAVSAVKAMMIDLLCRAMRIDLLCRAMRNNLLCRAIRIDLLLGDEDQLAMHDQLVVSSHED
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G009930.1Lsi06G009930.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi06G009930Watermelon (97103) v2lsiwmbB358
Lsi06G009930Watermelon (97103) v2lsiwmbB373
Lsi06G009930Watermelon (97103) v2lsiwmbB375
Lsi06G009930Watermelon (97103) v2lsiwmbB383
Lsi06G009930Wax gourdlsiwgoB480
Lsi06G009930Wax gourdlsiwgoB485
Lsi06G009930Wax gourdlsiwgoB498
Lsi06G009930Wax gourdlsiwgoB518
Lsi06G009930Bottle gourd (USVL1VR-Ls)lsilsiB057
Lsi06G009930Bottle gourd (USVL1VR-Ls)lsilsiB140
Lsi06G009930Bottle gourd (USVL1VR-Ls)lsilsiB164
Lsi06G009930Cucumber (Gy14) v1cgylsiB009
Lsi06G009930Cucumber (Gy14) v1cgylsiB112
Lsi06G009930Cucumber (Gy14) v1cgylsiB209
Lsi06G009930Cucumber (Gy14) v1cgylsiB509
Lsi06G009930Cucurbita maxima (Rimu)cmalsiB031
Lsi06G009930Cucurbita maxima (Rimu)cmalsiB074
Lsi06G009930Cucurbita maxima (Rimu)cmalsiB147
Lsi06G009930Cucurbita maxima (Rimu)cmalsiB182
Lsi06G009930Cucurbita maxima (Rimu)cmalsiB441
Lsi06G009930Cucurbita maxima (Rimu)cmalsiB442
Lsi06G009930Cucurbita maxima (Rimu)cmalsiB735
Lsi06G009930Cucurbita moschata (Rifu)cmolsiB019
Lsi06G009930Cucurbita moschata (Rifu)cmolsiB060
Lsi06G009930Cucurbita moschata (Rifu)cmolsiB131
Lsi06G009930Cucurbita moschata (Rifu)cmolsiB172
Lsi06G009930Cucurbita moschata (Rifu)cmolsiB431
Lsi06G009930Cucurbita moschata (Rifu)cmolsiB725
Lsi06G009930Cucurbita pepo (Zucchini)cpelsiB096
Lsi06G009930Cucurbita pepo (Zucchini)cpelsiB300
Lsi06G009930Cucurbita pepo (Zucchini)cpelsiB557
Lsi06G009930Cucurbita pepo (Zucchini)cpelsiB643
Lsi06G009930Cucurbita pepo (Zucchini)cpelsiB680
Lsi06G009930Wild cucumber (PI 183967)cpilsiB074
Lsi06G009930Wild cucumber (PI 183967)cpilsiB130
Lsi06G009930Wild cucumber (PI 183967)cpilsiB225
Lsi06G009930Wild cucumber (PI 183967)cpilsiB300
Lsi06G009930Cucumber (Chinese Long) v2culsiB074
Lsi06G009930Cucumber (Chinese Long) v2culsiB131
Lsi06G009930Cucumber (Chinese Long) v2culsiB226
Lsi06G009930Cucumber (Chinese Long) v2culsiB300
Lsi06G009930Melon (DHL92) v3.5.1lsimeB403
Lsi06G009930Melon (DHL92) v3.5.1lsimeB412
Lsi06G009930Melon (DHL92) v3.5.1lsimeB422
Lsi06G009930Watermelon (Charleston Gray)lsiwcgB354
Lsi06G009930Watermelon (Charleston Gray)lsiwcgB371
Lsi06G009930Watermelon (Charleston Gray)lsiwcgB373
Lsi06G009930Watermelon (Charleston Gray)lsiwcgB382
Lsi06G009930Watermelon (97103) v1lsiwmB400
Lsi06G009930Watermelon (97103) v1lsiwmB405
Lsi06G009930Watermelon (97103) v1lsiwmB412
Lsi06G009930Watermelon (97103) v1lsiwmB415
Lsi06G009930Cucumber (Gy14) v2cgyblsiB063
Lsi06G009930Cucumber (Gy14) v2cgyblsiB120
Lsi06G009930Cucumber (Gy14) v2cgyblsiB215
Lsi06G009930Cucumber (Gy14) v2cgyblsiB275
Lsi06G009930Melon (DHL92) v3.6.1lsimedB425
Lsi06G009930Melon (DHL92) v3.6.1lsimedB435
Lsi06G009930Melon (DHL92) v3.6.1lsimedB443
Lsi06G009930Silver-seed gourdcarlsiB037
Lsi06G009930Silver-seed gourdcarlsiB115
Lsi06G009930Silver-seed gourdcarlsiB181
Lsi06G009930Silver-seed gourdcarlsiB228
Lsi06G009930Silver-seed gourdcarlsiB518
Lsi06G009930Silver-seed gourdcarlsiB578
Lsi06G009930Cucumber (Chinese Long) v3cuclsiB073
Lsi06G009930Cucumber (Chinese Long) v3cuclsiB142
Lsi06G009930Cucumber (Chinese Long) v3cuclsiB248
Lsi06G009930Cucumber (Chinese Long) v3cuclsiB320