Lsi06G009360 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G009360
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionGTP-binding nuclear Ran-3-like protein
Locationchr06 : 19259913 .. 19262688 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGAAAAAGAGAAAAGAAAACTCCGTGGTGCTTACCGTATAAACCCTCGTCCTCAAATCTCAACCCACTTTAACCTAAATCTTTGATTCCTTCCTCTCAGCTTCGCATTTCCAATGGTGGGTACTCTCTTTTACTCTCACTTCTGGATATGCTTATTTTTCTGAGTATTTGTTGATTCTATTATGTGCTGAATTTCGTAGGCTTTGCCGGATCAGAAGACCGTTGATTATCCGAGTTTCAAGCTTGTGATTGTTGGTGATGGTGGCACTGGTATGTTCTTTTTTCTGAGTTTGCTTTGGAAATAGCTGTATCATATCTTATCATGGTCTTTGCTAGCTAGTAGTACTAATTTGAGCTTGGAGTGAGAAGAAGAAAGCTTAAAACTTGAAACTGTGTCAATGGCGTATGCTTTTAACAAAACTGGATGGGGGGTTGGATTCCTGTTCCGAAAGAAAATTTGTCTGTGATTTATTAGGGTTTTAAATTTTGGTTCAAAGGTATTCAAGATTGTTTGTTAGTTTTCTATAAAAACTTGAAAATTCATGACATTGCCTTGTAGTTGAGGATGCTACAACGGTAATAAGAAAGGAAGTAAGTAAGAACGAAAAGAGATTCATGAATTAGAATATTGGATTTGGTTAATCTAGGTAGATGTTGATTGTTTGTATTGCTTCAGTTTGGAGGATCTTTCTTCTTCAAAATGGATTCTGATAAGCCTTGAAATTACAAGTATAACTGAATTGGTTACGTTTTTGTTGCTCAGGAAAAACAACTTTTGTGAAAAGACATCTCACAGGGGAGTTCGAAAAGAAATACGAACGTAAGAATTATTGTAATTTTTTCCCATTTTGAGGTTTATTCATTGTTTGGATCTTATTTAAAATAAACAAACAACTTATAATTATAATTTGTGCTGTTTCTTTGAACTTTTAGCAACCATTGGCGTGGAGGTGCACCCATTGGACTTCTTCACAAACTGTGGAAAAATTAGATTTTACTGTTGGGACACTGCTGGGCAGGAGAAATTTGGTGGTTTACGTGATGGCTACTAGTAAGTTAAAGAATTAGTTCATTTATTCTTTCGGATGTATTTTTATCCTCACAACTTTCTATGTTCCCCATTATATACTCTTGCACTATTTCCTCATTCCTGTAGGGAGTCTGTTTCGATTACTGTTTACTATGAATAATTTTGTTGAATTTTCAATATTCTCTAGCACACTTGATTTGATAGATTATTTGATCTTTACTGCCTTTATGGGCCTTCTTTGAGAGTCTTGTTATGACGTGGTATTATTTTTCGTGATGGACTTTCATTTCTGTTCTGATTTCAATTACCTCCTACCGCTGAAATTCCTTATTTTGTGTCTTGATTGCAGCATCCATGGGCAATGTGCAATCATCATGTTTGATGTTACTGCCAGATTGACATATAAAAATGTTCCTACATGGCACCGTGATCTTTGCAGGTAATCTAACATTTGTTTGTATGAAACAATTGTATATAAGTGAATTGTTGTATTGTCAGTGCTCAGTGCACTCTTCTTGAATCTGCTTACCATTTGATGACTTGATAACTTGCAGGGTGTGTGAGAATATTCCAATTGTTCTTTGTGGAAACAAGGTCGATGTGAAAAACAGGCAGGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAGTACTATGAAATATCTGCGAAGAGTAACTACAACTTCGAAAAACCATTCCTGTACTTGGCCAGAAAGTTAGCTGGGTAAATCCAGTTCCCGGTTTACATGTATTACTTTTTTCTTTAATGTGGGAACTTTCATGACAATGGACTTCCTTTTCTTATGGCGATCCAGGGATCCTAACATTCATTTCGTGGAGTCTCCAGCTCTCGCTCCTCCTGAAGTACACATTGACTTGGCTGCCCAGCAACAGTAAGACTTTCTCATCCTAAGTCATTACTAATGAAACCATTCACATCCTTTCGAGTAATCCATATCTATATGTTGCTTGTTTCTGCAGGCATGAAGCTGAATTAGCAGCAGCAGCAAGTCAACCTCTTCCCGATGATGATGATGATGCTTTCGAGTAAAAATGGTCAATCATATGGTGATGATGCTCTTTGCATATCTATTTTCTACTGTTGCCCCCCCGAGTAAGATATTTTCTCCTTGCTAGGATTTACAGAAGGGAATAGGATGAAAGAAAATTGTGGTGTAGATGGACGGTTTCTATTCGTGAGATTCGCTATCGATTAATAGAGTGCCACATGGCCTCGAATGAAATTCATTATGAAGAATTTCTCTGTCCTGTGTTCTATTTGATTTGTGTTCGTTTTCCCCTTTTTTTCATCTTTGGGGTTTATCTCTTGGTGCGAAGTGCGAACAACGTCCGAGTTTGAAATGGAGCTTTTTTTCTTTTCTTTGTGCTCTCTATTTGTGCTTGTTAGCGGCATGTAAGGATTATGTGGTTTTTAATTATGATGAATGTGTGGTGAAAGAAGTGACGAGGGAGGTTTATGGTTATTATAAATTTTGAGTTTTTGGAGCTTATTTGGTAAAATTGATAGTGTTAGACAATCTTGGTTTTTCTTTCTTCCCCTTTTCCCTTTTCCTAGTCTTCTTTCTTTTCTAAATTAGTTATTTCGTTTCATATTATCTTACCATTCATTTTGAATATTGAATCTTGACATTTGGATGCAACAAATCAAGAGGGATGGATATGTGTTGTTTTTGTTTGTATTCTATAAGAGATTGTTTTGGGCTTGTAATTGGAT

mRNA sequence

AAAGAAAAAGAGAAAAGAAAACTCCGTGGTGCTTACCGTATAAACCCTCGTCCTCAAATCTCAACCCACTTTAACCTAAATCTTTGATTCCTTCCTCTCAGCTTCGCATTTCCAATGGCTTTGCCGGATCAGAAGACCGTTGATTATCCGAGTTTCAAGCTTGTGATTGTTGGTGATGGTGGCACTGGAAAAACAACTTTTGTGAAAAGACATCTCACAGGGGAGTTCGAAAAGAAATACGAACCAACCATTGGCGTGGAGGTGCACCCATTGGACTTCTTCACAAACTGTGGAAAAATTAGATTTTACTGTTGGGACACTGCTGGGCAGGAGAAATTTGGTGGTTTACGTGATGGCTACTACATCCATGGGCAATGTGCAATCATCATGTTTGATGTTACTGCCAGATTGACATATAAAAATGTTCCTACATGGCACCGTGATCTTTGCAGGGTGTGTGAGAATATTCCAATTGTTCTTTGTGGAAACAAGGTCGATGTGAAAAACAGGCAGGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAGTACTATGAAATATCTGCGAAGAGTAACTACAACTTCGAAAAACCATTCCTGTACTTGGCCAGAAAGTTAGCTGGGGATCCTAACATTCATTTCGTGGAGTCTCCAGCTCTCGCTCCTCCTGAAGTACACATTGACTTGGCTGCCCAGCAACAGCATGAAGCTGAATTAGCAGCAGCAGCAAGTCAACCTCTTCCCGATGATGATGATGATGCTTTCGAGTAAAAATGGTCAATCATATGGTGATGATGCTCTTTGCATATCTATTTTCTACTGTTGCCCCCCCGAGTAAGATATTTTCTCCTTGCTAGGATTTACAGAAGGGAATAGGATGAAAGAAAATTGTGGTGTAGATGGACGGTTTCTATTCGTGAGATTCGCTATCGATTAATAGAGTGCCACATGGCCTCGAATGAAATTCATTATGAAGAATTTCTCTGTCCTGTGTTCTATTTGATTTGTGTTCGTTTTCCCCTTTTTTTCATCTTTGGGGTTTATCTCTTGGTGCGAAGTGCGAACAACGTCCGAGTTTGAAATGGAGCTTTTTTTCTTTTCTTTGTGCTCTCTATTTGTGCTTGTTAGCGGCATGTAAGGATTATGTGGTTTTTAATTATGATGAATGTGTGGTGAAAGAAGTGACGAGGGAGGTTTATGGTTATTATAAATTTTGAGTTTTTGGAGCTTATTTGGTAAAATTGATAGTGTTAGACAATCTTGGTTTTTCTTTCTTCCCCTTTTCCCTTTTCCTAGTCTTCTTTCTTTTCTAAATTAGTTATTTCGTTTCATATTATCTTACCATTCATTTTGAATATTGAATCTTGACATTTGGATGCAACAAATCAAGAGGGATGGATATGTGTTGTTTTTGTTTGTATTCTATAAGAGATTGTTTTGGGCTTGTAATTGGAT

Coding sequence (CDS)

ATGGCTTTGCCGGATCAGAAGACCGTTGATTATCCGAGTTTCAAGCTTGTGATTGTTGGTGATGGTGGCACTGGAAAAACAACTTTTGTGAAAAGACATCTCACAGGGGAGTTCGAAAAGAAATACGAACCAACCATTGGCGTGGAGGTGCACCCATTGGACTTCTTCACAAACTGTGGAAAAATTAGATTTTACTGTTGGGACACTGCTGGGCAGGAGAAATTTGGTGGTTTACGTGATGGCTACTACATCCATGGGCAATGTGCAATCATCATGTTTGATGTTACTGCCAGATTGACATATAAAAATGTTCCTACATGGCACCGTGATCTTTGCAGGGTGTGTGAGAATATTCCAATTGTTCTTTGTGGAAACAAGGTCGATGTGAAAAACAGGCAGGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAGTACTATGAAATATCTGCGAAGAGTAACTACAACTTCGAAAAACCATTCCTGTACTTGGCCAGAAAGTTAGCTGGGGATCCTAACATTCATTTCGTGGAGTCTCCAGCTCTCGCTCCTCCTGAAGTACACATTGACTTGGCTGCCCAGCAACAGCATGAAGCTGAATTAGCAGCAGCAGCAAGTCAACCTCTTCCCGATGATGATGATGATGCTTTCGAGTAA

Protein sequence

MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFVESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Homology
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BLAST of Lsi06G009360 vs. Swiss-Prot
Match: RAN3_ARATH (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana GN=RAN3 PE=1 SV=2)

HSP 1 Score: 453.8 bits (1166), Expect = 1.1e-126
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEV IDLAAQQQHEAELAAAASQPLPDDDDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]
BLAST of Lsi06G009360 vs. Swiss-Prot
Match: RAN2_ARATH (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana GN=RAN2 PE=1 SV=3)

HSP 1 Score: 451.8 bits (1161), Expect = 4.2e-126
Identity = 212/221 (95.93%), Postives = 220/221 (99.55%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVH+D+AAQQQ+EA+LAAAA+QPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]
BLAST of Lsi06G009360 vs. Swiss-Prot
Match: RANA1_TOBAC (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 5.5e-126
Identity = 213/221 (96.38%), Postives = 217/221 (98.19%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP Q+ VDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPGQQAVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEV IDLAAQQQHEAELAAAASQPLPDDDD+ F+
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDETFD 221

[Close]
BLAST of Lsi06G009360 vs. Swiss-Prot
Match: RAN1_ORYSI (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=2)

HSP 1 Score: 444.9 bits (1143), Expect = 5.2e-124
Identity = 209/221 (94.57%), Postives = 217/221 (98.19%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE+SAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAGDGNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           E+PALAPP+V IDLAAQQQHEAELAAAA+QPLPDDDDD  E
Sbjct: 181 ETPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221

[Close]
BLAST of Lsi06G009360 vs. Swiss-Prot
Match: RAN1_ORYSJ (GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 5.2e-124
Identity = 209/221 (94.57%), Postives = 217/221 (98.19%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVT+RLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYE+SAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEVSAKSNYNFEKPFLYLARKLAGDGNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           E+PALAPP+V IDLAAQQQHEAELAAAA+QPLPDDDDD  E
Sbjct: 181 ETPALAPPDVTIDLAAQQQHEAELAAAAAQPLPDDDDDLIE 221

[Close]
BLAST of Lsi06G009360 vs. TrEMBL
Match: A0A068PXN5_CITLA (GTP-binding nuclear protein OS=Citrullus lanatus GN=CLRan1 PE=2 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 3.2e-128
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]
BLAST of Lsi06G009360 vs. TrEMBL
Match: A0A0B0P781_GOSAR (GTP-binding nuclear protein OS=Gossypium arboreum GN=F383_07948 PE=3 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 5.9e-127
Identity = 218/221 (98.64%), Postives = 221/221 (100.00%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]
BLAST of Lsi06G009360 vs. TrEMBL
Match: D7TBW7_VITVI (GTP-binding nuclear protein OS=Vitis vinifera GN=VIT_11s0016g04780 PE=3 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 5.9e-127
Identity = 218/221 (98.64%), Postives = 221/221 (100.00%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 40  MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 99

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 100 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 159

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFV
Sbjct: 160 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 219

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 220 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 260

[Close]
BLAST of Lsi06G009360 vs. TrEMBL
Match: F6H3T8_VITVI (GTP-binding nuclear protein OS=Vitis vinifera GN=VIT_04s0008g05020 PE=3 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 5.9e-127
Identity = 218/221 (98.64%), Postives = 221/221 (100.00%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]
BLAST of Lsi06G009360 vs. TrEMBL
Match: M5XCV1_PRUPE (GTP-binding nuclear protein OS=Prunus persica GN=PRUPE_ppa008371mg PE=3 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 1.7e-126
Identity = 217/221 (98.19%), Postives = 220/221 (99.55%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 115 MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 174

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 175 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 234

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFV
Sbjct: 235 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 294

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDD FE
Sbjct: 295 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDTFE 335

[Close]
BLAST of Lsi06G009360 vs. TAIR10
Match: AT5G55190.1 (AT5G55190.1 RAN GTPase 3)

HSP 1 Score: 453.8 bits (1166), Expect = 6.3e-128
Identity = 215/221 (97.29%), Postives = 218/221 (98.64%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEV IDLAAQQQHEAELAAAASQPLPDDDDD FE
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]
BLAST of Lsi06G009360 vs. TAIR10
Match: AT5G20020.1 (AT5G20020.1 RAS-related GTP-binding nuclear protein 2)

HSP 1 Score: 451.8 bits (1161), Expect = 2.4e-127
Identity = 212/221 (95.93%), Postives = 220/221 (99.55%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVH+D+AAQQQ+EA+LAAAA+QPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]
BLAST of Lsi06G009360 vs. TAIR10
Match: AT5G20010.1 (AT5G20010.1 RAS-related nuclear protein-1)

HSP 1 Score: 443.0 bits (1138), Expect = 1.1e-124
Identity = 208/221 (94.12%), Postives = 216/221 (97.74%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           E+PALAPPEVHID+A QQ++EAEL  AA+QPLPDDDDD FE
Sbjct: 181 ETPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]
BLAST of Lsi06G009360 vs. TAIR10
Match: AT5G55080.1 (AT5G55080.1 ras-related nuclear protein 4)

HSP 1 Score: 305.8 bits (782), Expect = 2.1e-83
Identity = 145/212 (68.40%), Postives = 171/212 (80.66%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+ VD P+FKL+IVGDGGTGKTTF+KRHLTGEFE   EPT+GV+++PLDFFTN G
Sbjct: 1   MALPNQQNVDLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRF CWDTAGQEK+ GL+D YYIHGQCAIIMFDVTAR TY N+  W+RDL RVC+NIPI
Sbjct: 61  KIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDV +RQ+K K V++HRKK LQYYE+SAK+N NFEKPFLYLAR++AGD  + FV
Sbjct: 121 VLCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAGDAKLSFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPL 213
           ES     PE  ID    +  +     A +QPL
Sbjct: 181 ES-----PEAQIDNLDVESLQLLTVEAGTQPL 207

[Close]
BLAST of Lsi06G009360 vs. TAIR10
Match: AT4G39890.1 (AT4G39890.1 RAB GTPase homolog H1C)

HSP 1 Score: 105.5 bits (262), Expect = 4.2e-23
Identity = 60/164 (36.59%), Postives = 87/164 (53.05%), Query Frame = 1 

Query: 14  FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
           FKLV +GD   GKT+ + R +  +F+  Y+PTIG++      +     +R   WDTAGQE
Sbjct: 10  FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69

Query: 74  KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVD-VK 133
           +F  L   Y      AI+++DV+ R T+ N   W  D+ R     N+ IVL GNK D V+
Sbjct: 70  RFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVE 129

Query: 134 NRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAG 174
            RQV   +     K+  + + E SAK N+N +  F  +A  L G
Sbjct: 130 KRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPG 173

[Close]
BLAST of Lsi06G009360 vs. NCBI nr
Match: gi|662033623|dbj|BAP11912.1| (Ran-GTPase [Citrullus lanatus])

HSP 1 Score: 465.7 bits (1197), Expect = 4.5e-128
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]
BLAST of Lsi06G009360 vs. NCBI nr
Match: gi|659130105|ref|XP_008465001.1| (PREDICTED: GTP-binding nuclear protein Ran-3-like [Cucumis melo])

HSP 1 Score: 462.6 bits (1189), Expect = 3.8e-127
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 34  MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 93

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 94  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 153

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NIHFV
Sbjct: 154 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 213

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 214 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 254

[Close]
BLAST of Lsi06G009360 vs. NCBI nr
Match: gi|659130107|ref|XP_008465002.1| (PREDICTED: GTP-binding nuclear protein Ran-3 [Cucumis melo])

HSP 1 Score: 462.6 bits (1189), Expect = 3.8e-127
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]
BLAST of Lsi06G009360 vs. NCBI nr
Match: gi|225430202|ref|XP_002284967.1| (PREDICTED: GTP-binding nuclear protein Ran-3 [Vitis vinifera])

HSP 1 Score: 461.5 bits (1186), Expect = 8.5e-127
Identity = 218/221 (98.64%), Postives = 221/221 (100.00%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]
BLAST of Lsi06G009360 vs. NCBI nr
Match: gi|731407144|ref|XP_002285018.2| (PREDICTED: GTP-binding nuclear protein Ran-3-like [Vitis vinifera])

HSP 1 Score: 461.5 bits (1186), Expect = 8.5e-127
Identity = 218/221 (98.64%), Postives = 221/221 (100.00%), Query Frame = 1 

Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 40  MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 99

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 100 KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 159

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPN+HFV
Sbjct: 160 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 219

Query: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 222
           ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE
Sbjct: 220 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 260

The following BLAST results are available for this feature:
BLAST of Lsi06G009360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RAN3_ARATH1.1e-12697.29GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana GN=RAN3 PE=1 SV=2[more]
RAN2_ARATH4.2e-12695.93GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana GN=RAN2 PE=1 SV=3[more]
RANA1_TOBAC5.5e-12696.38GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum GN=RAN-A1 PE=2 SV=1[more]
RAN1_ORYSI5.2e-12494.57GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. indica GN=RAN1 PE=2 SV=... [more]
RAN1_ORYSJ5.2e-12494.57GTP-binding nuclear protein Ran-1 OS=Oryza sativa subsp. japonica GN=RAN1 PE=2 S... [more]
BLAST of Lsi06G009360 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A068PXN5_CITLA3.2e-128100.00GTP-binding nuclear protein OS=Citrullus lanatus GN=CLRan1 PE=2 SV=1[more]
A0A0B0P781_GOSAR5.9e-12798.64GTP-binding nuclear protein OS=Gossypium arboreum GN=F383_07948 PE=3 SV=1[more]
D7TBW7_VITVI5.9e-12798.64GTP-binding nuclear protein OS=Vitis vinifera GN=VIT_11s0016g04780 PE=3 SV=1[more]
F6H3T8_VITVI5.9e-12798.64GTP-binding nuclear protein OS=Vitis vinifera GN=VIT_04s0008g05020 PE=3 SV=1[more]
M5XCV1_PRUPE1.7e-12698.19GTP-binding nuclear protein OS=Prunus persica GN=PRUPE_ppa008371mg PE=3 SV=1[more]
BLAST of Lsi06G009360 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G55190.16.3e-12897.29 RAN GTPase 3[more]
AT5G20020.12.4e-12795.93 RAS-related GTP-binding nuclear protein 2[more]
AT5G20010.11.1e-12494.12 RAS-related nuclear protein-1[more]
AT5G55080.12.1e-8368.40 ras-related nuclear protein 4[more]
AT4G39890.14.2e-2336.59 RAB GTPase homolog H1C[more]
BLAST of Lsi06G009360 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|662033623|dbj|BAP11912.1|4.5e-128100.00Ran-GTPase [Citrullus lanatus][more]
gi|659130105|ref|XP_008465001.1|3.8e-12799.55PREDICTED: GTP-binding nuclear protein Ran-3-like [Cucumis melo][more]
gi|659130107|ref|XP_008465002.1|3.8e-12799.55PREDICTED: GTP-binding nuclear protein Ran-3 [Cucumis melo][more]
gi|225430202|ref|XP_002284967.1|8.5e-12798.64PREDICTED: GTP-binding nuclear protein Ran-3 [Vitis vinifera][more]
gi|731407144|ref|XP_002285018.2|8.5e-12798.64PREDICTED: GTP-binding nuclear protein Ran-3-like [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO:0006913nucleocytoplasmic transport
GO:0006886intracellular protein transport
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR002041Ran_GTPase
IPR001806Small_GTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006606 protein import into nucleus
biological_process GO:0000054 ribosomal subunit export from nucleus
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0007165 signal transduction
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0016020 membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0009506 plasmodesma
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G009360.1Lsi06G009360.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 15..171
score: 4.5
IPR002041Ran GTPasePRINTSPR00627GTPRANTC4coord: 74..92
score: 7.8E-61coord: 168..190
score: 7.8E-61coord: 94..115
score: 7.8E-61coord: 130..148
score: 7.8E-61coord: 27..41
score: 7.8
IPR002041Ran GTPasePROFILEPS51418RANcoord: 7..171
score: 30
IPR005225Small GTP-binding protein domainTIGRFAMsTIGR00231TIGR00231coord: 14..164
score: 7.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 9..201
score: 5.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 14..194
score: 5.17
NoneNo IPR availablePANTHERPTHR24071FAMILY NOT NAMEDcoord: 1..221
score: 1.9E
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 11..174
score: 5.8
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 16..170
score: 1.
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 14..174
score: 2.0
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 19..220
score: 4.0E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi06G009360Wax gourdlsiwgoB473
Lsi06G009360Wax gourdlsiwgoB497
Lsi06G009360Wax gourdlsiwgoB510
Lsi06G009360Wax gourdlsiwgoB518
Lsi06G009360Bottle gourd (USVL1VR-Ls)lsilsiB057
Lsi06G009360Bottle gourd (USVL1VR-Ls)lsilsiB115
Lsi06G009360Cucurbita maxima (Rimu)cmalsiB074
Lsi06G009360Cucurbita maxima (Rimu)cmalsiB130
Lsi06G009360Cucurbita maxima (Rimu)cmalsiB182
Lsi06G009360Cucurbita maxima (Rimu)cmalsiB735
Lsi06G009360Cucurbita moschata (Rifu)cmolsiB060
Lsi06G009360Cucurbita moschata (Rifu)cmolsiB119
Lsi06G009360Cucurbita moschata (Rifu)cmolsiB172
Lsi06G009360Cucurbita moschata (Rifu)cmolsiB725
Lsi06G009360Cucurbita pepo (Zucchini)cpelsiB096
Lsi06G009360Cucurbita pepo (Zucchini)cpelsiB300
Lsi06G009360Cucurbita pepo (Zucchini)cpelsiB557
Lsi06G009360Cucurbita pepo (Zucchini)cpelsiB566
Lsi06G009360Wild cucumber (PI 183967)cpilsiB061
Lsi06G009360Wild cucumber (PI 183967)cpilsiB130
Lsi06G009360Wild cucumber (PI 183967)cpilsiB544
Lsi06G009360Cucumber (Chinese Long) v2culsiB060
Lsi06G009360Cucumber (Chinese Long) v2culsiB131
Lsi06G009360Cucumber (Chinese Long) v2culsiB529
Lsi06G009360Melon (DHL92) v3.5.1lsimeB394
Lsi06G009360Melon (DHL92) v3.5.1lsimeB403
Lsi06G009360Melon (DHL92) v3.5.1lsimeB418
Lsi06G009360Watermelon (Charleston Gray)lsiwcgB350
Lsi06G009360Watermelon (Charleston Gray)lsiwcgB354
Lsi06G009360Watermelon (Charleston Gray)lsiwcgB373
Lsi06G009360Watermelon (97103) v1lsiwmB387
Lsi06G009360Watermelon (97103) v1lsiwmB412
Lsi06G009360Watermelon (97103) v1lsiwmB415
Lsi06G009360Cucumber (Gy14) v2cgyblsiB057
Lsi06G009360Cucumber (Gy14) v2cgyblsiB120
Lsi06G009360Melon (DHL92) v3.6.1lsimedB416
Lsi06G009360Melon (DHL92) v3.6.1lsimedB425
Lsi06G009360Melon (DHL92) v3.6.1lsimedB440
Lsi06G009360Silver-seed gourdcarlsiB035
Lsi06G009360Silver-seed gourdcarlsiB037
Lsi06G009360Silver-seed gourdcarlsiB115
Lsi06G009360Silver-seed gourdcarlsiB518
Lsi06G009360Cucumber (Chinese Long) v3cuclsiB070
Lsi06G009360Cucumber (Chinese Long) v3cuclsiB142
Lsi06G009360Cucumber (Chinese Long) v3cuclsiB565
Lsi06G009360Watermelon (97103) v2lsiwmbB358
Lsi06G009360Watermelon (97103) v2lsiwmbB375
Lsi06G009360Watermelon (97103) v2lsiwmbB385