Lsi06G008550 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G008550
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPlastidic glucose transporter 3
Locationchr06 : 17975200 .. 17976594 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGACTTCTGGTGAGGACTTGCTGCGGTTTGGAATGTGGGATCGAAAACGTGAAGCTTTCTCAACGTACAAGCGATTGTCATTGAAAGATAACTCCAATTCAATTGACATGGAGGATAATTCAGGTAGCCCATTATTTGGCAGTCTGTAGCTTTGCGAGCAATGGATTTCATTTGGAAATATTTTCTGAATCGATGGGCTTTTTAAAATGATGGTGAAGACACGATAGTTGGTGTAACTTGGGGTTTTTTTTTAGCTCTTTTGCAGAGTGGTAAGGATTTCGAAGCCTCAAACCCTTCATGGAGTCTTTCTTTACCGCACGTGCTAGTGGCAACCTTAACTTCATTTCTATTTGGCTACCACCTGGGGTTAGTTCTCTATACTGGTTTCAGCTCTCTCTCTTTCTCTCGGTGTCAATGTTCGGTGAAGCTGATCTTGCTTGTTTGTTCACAAGTAGACACTGACTATATGTTGCTATCTTCTGCAGAGTAGTAAATGAACCACTGGAAAGCATTTCTGCGGATCTTGGTTTCAATGGGAATACATTGGCAGAAGGTGTCATGCTGAGAATTTCTTGTTTGTTCTATTTAATTCCAATTGTTTAATTGAGATTATTCAATGCTCTTAATGTGCTTTACCATTATATTTCCGATGAAGGTTTGGTTGTGAGTACATGTCTTGGTGGTGCCTTAATTGGATCTTTACTGAGTGGTTGGGTAGCTGATGGGGTTGGGCGTCGTAGGGCTTTTCAACTGAGTGCTTTGCCAATGATTCTTGGTGCTGGAATGAGGTGAAATGTTCTAACCATAAAAGGCAATTCTAGCCAAGTTCTACCATGCTGTTTATCATACCTTCATGCTTTTTGCTCGGCAATCTTGGCATTGTTCCCGTGTATTATAATAAACTGGTATGTTTGTGTATGCTTGTGTTGAATTTGACTTCACATACTACCTTTATCATAACAATCACTGCCACGGTCTTGTTATGATGTGACTCCTATATGTTCTTTAGGTCATTCGTTTGCCGCTACTGATATAATTCTCAGTAACATTAGTTCTGGCATTTTCTGTCAATTGGTCTTTTCTGTTCATACTTTTGCAATTTAATTCACGAGTACACTTTTTTTAATTCTTTGGCCATATCATGGCTAGGTGTTGGCAAAAGTAATACCAGTTGAACCCAGCAAGTGTGGGAGGGTGGTTGAATCATATGGTGGGGTAAGGGTCAGGGTCAGCCATATTTATAAGGGGAGTGTTCTTCAGTTCATCTAACAAAAACCATAATGAGAAAAGGGGGTCTTGGCCGACTTAATTATGTTTAGTTGACTAGAGGCAGTGGGCTCAATGGTAACTTTGAAAGTTTCCACTTGTCAGCATTGTACTCCTCCAGTCAATAG

mRNA sequence

AGGACTTCTGGTGAGGACTTGCTGCGGTTTGGAATGTGGGATCGAAAACGTGAAGCTTTCTCAACGTACAAGCGATTGTCATTGAAAGATAACTCCAATTCAATTGACATGGAGGATAATTCAGGTAGCCCATTATTTGGCACTCTTTTGCAGAGTGGTAAGGATTTCGAAGCCTCAAACCCTTCATGGAGTCTTTCTTTACCGCACGTGCTAGTGGCAACCTTAACTTCATTTCTATTTGGCTACCACCTGGGAGTAGTAAATGAACCACTGGAAAGCATTTCTGCGGATCTTGGTTTCAATGGGAATACATTGGCAGAAGGTTTGGTTGTGAGTACATGTCTTGGTGGTGCCTTAATTGGATCTTTACTGAGTGGTTGGGTAGCTGATGGGGTTGGGCGTCGTAGGGCTTTTCAACTGAGTGCTTTGCCAATGATTCTTGGTCATTCGTTTGCCGCTACTGATATAATTCTCAGTAACATTAGTTCTGGCATTTTCTGTCAATTGGTGTTGGCAAAAGTAATACCAGTTGAACCCAGCAAGTGTGGGAGGGTGGTTGAATCATATGGTGGGTTGACTAGAGGCAGTGGGCTCAATGGTAACTTTGAAAGTTTCCACTTGTCAGCATTGTACTCCTCCAGTCAATAG

Coding sequence (CDS)

AGGACTTCTGGTGAGGACTTGCTGCGGTTTGGAATGTGGGATCGAAAACGTGAAGCTTTCTCAACGTACAAGCGATTGTCATTGAAAGATAACTCCAATTCAATTGACATGGAGGATAATTCAGGTAGCCCATTATTTGGCACTCTTTTGCAGAGTGGTAAGGATTTCGAAGCCTCAAACCCTTCATGGAGTCTTTCTTTACCGCACGTGCTAGTGGCAACCTTAACTTCATTTCTATTTGGCTACCACCTGGGAGTAGTAAATGAACCACTGGAAAGCATTTCTGCGGATCTTGGTTTCAATGGGAATACATTGGCAGAAGGTTTGGTTGTGAGTACATGTCTTGGTGGTGCCTTAATTGGATCTTTACTGAGTGGTTGGGTAGCTGATGGGGTTGGGCGTCGTAGGGCTTTTCAACTGAGTGCTTTGCCAATGATTCTTGGTCATTCGTTTGCCGCTACTGATATAATTCTCAGTAACATTAGTTCTGGCATTTTCTGTCAATTGGTGTTGGCAAAAGTAATACCAGTTGAACCCAGCAAGTGTGGGAGGGTGGTTGAATCATATGGTGGGTTGACTAGAGGCAGTGGGCTCAATGGTAACTTTGAAAGTTTCCACTTGTCAGCATTGTACTCCTCCAGTCAATAG

Protein sequence

RTSGEDLLRFGMWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVLVATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVGRRRAFQLSALPMILGHSFAATDIILSNISSGIFCQLVLAKVIPVEPSKCGRVVESYGGLTRGSGLNGNFESFHLSALYSSSQ
Homology
[Close]
BLAST of Lsi06G008550 vs. Swiss-Prot
Match: PLST2_ARATH (Probable plastidic glucose transporter 2 OS=Arabidopsis thaliana GN=At1g67300 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.7e-42
Identity = 93/135 (68.89%), Postives = 107/135 (79.26%), Query Frame = 1 

Query: 16  KREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKD--FEASNPSWSLSLPHVLVA 75
           +RE  S YKR S +D S  ID+ED+SG      LL++  D   E +NPSW  SLPHVLVA
Sbjct: 5   QRETSSMYKRTSSRDYSPMIDVEDSSG------LLENDVDNEMETTNPSWKCSLPHVLVA 64

Query: 76  TLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVG 135
           T++SFLFGYHLGVVNEPLESIS+DLGF+G+TLAEGLVVS CLGGA +GSL SG VADG G
Sbjct: 65  TISSFLFGYHLGVVNEPLESISSDLGFSGDTLAEGLVVSVCLGGAFLGSLFSGGVADGFG 124

Query: 136 RRRAFQLSALPMILG 149
           RRRAFQ+ ALPMILG
Sbjct: 125 RRRAFQICALPMILG 133

[Close]
BLAST of Lsi06G008550 vs. Swiss-Prot
Match: PLST3_ARATH (Probable plastidic glucose transporter 3 OS=Arabidopsis thaliana GN=At1g79820 PE=2 SV=2)

HSP 1 Score: 158.7 bits (400), Expect = 7.2e-38
Identity = 91/143 (63.64%), Postives = 105/143 (73.43%), Query Frame = 1 

Query: 24  KRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVLVATLTSFLFGYH 83
           KR+  K+  +++D  + +     GT    GKD    NPSW  SLPHVLVA+LTS LFGYH
Sbjct: 18  KRVPSKEFLSALDKAETAVRLPTGT----GKD--CGNPSWKRSLPHVLVASLTSLLFGYH 77

Query: 84  LGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVGRRRAFQLSAL 143
           LGVVNE LESIS DLGF+GNT+AEGLVVSTCLGGA IGSL SG VADGVGRRRAFQLSAL
Sbjct: 78  LGVVNETLESISIDLGFSGNTIAEGLVVSTCLGGAFIGSLFSGLVADGVGRRRAFQLSAL 137

Query: 144 PMILGHSFAATDIILSNISSGIF 167
           PMI+G S +A+   L  +  G F
Sbjct: 138 PMIVGASVSASTESLMGMLLGRF 154

[Close]
BLAST of Lsi06G008550 vs. Swiss-Prot
Match: PLST1_ARATH (Probable plastidic glucose transporter 1 OS=Arabidopsis thaliana GN=At1g05030 PE=2 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 3.0e-20
Identity = 50/104 (48.08%), Postives = 70/104 (67.31%), Query Frame = 1 

Query: 63  WSLSLPHVLVATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGS 122
           W  + PHV VA++ +FLFGYH+GV+N P+ SI+ +LGF GN++ EGLVVS  + GA IGS
Sbjct: 76  WLSAFPHVSVASMANFLFGYHIGVMNGPIVSIARELGFEGNSILEGLVVSIFIAGAFIGS 135

Query: 123 LLSGWVADGVGRRRAFQLSALPMILGHSFAATDIILSNISSGIF 167
           +++G + D  G RR FQ+  +P+ILG   +A    L  I  G F
Sbjct: 136 IVAGPLVDKFGYRRTFQIFTIPLILGALVSAQAHSLDEILCGRF 179

[Close]
BLAST of Lsi06G008550 vs. Swiss-Prot
Match: PLST4_ARATH (Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 3.5e-16
Identity = 60/172 (34.88%), Postives = 88/172 (51.16%), Query Frame = 1 

Query: 19  AFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVLVATLTSF 78
           +FS+ K  S++  ++S D ++    PL            +   S    LP V VA L + 
Sbjct: 70  SFSSVKARSVRAQASS-DGDEEEAIPL-----------RSEGKSSGTVLPFVGVACLGAI 129

Query: 79  LFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVGRRRAF 138
           LFGYHLGVVN  LE ++ DLG   NT+ +G +VS+ L GA +GS   G +AD  GR R F
Sbjct: 130 LFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGALADKFGRTRTF 189

Query: 139 QLSALPMILGHSFAAT---------DIILSNISSGIFCQLVLAKVIPVEPSK 182
           QL A+P+ +G    AT           +L+ I  GI   +V   +  + P++
Sbjct: 190 QLDAIPLAIGAFLCATAQSVQTMIVGRLLAGIGIGISSAIVPLYISEISPTE 229

[Close]
BLAST of Lsi06G008550 vs. Swiss-Prot
Match: ITR2_SCHPO (Myo-inositol transporter 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=itr2 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.3e-06
Identity = 58/214 (27.10%), Postives = 93/214 (43.46%), Query Frame = 1 

Query: 15  RKREAFSTYKR----LSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPS---WSLSL 74
           +K+  FS   R    L  ++ +N+ D + N  +       ++G+ FEA   S   W LS 
Sbjct: 33  KKKVPFSEDMREIPSLPNEEEANATDPQANEVAD------ENGEGFEAEKISSWIWVLSA 92

Query: 75  PHVLVATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGW 134
               VA ++  LFGY  GV++  L  + +DLG   ++  + L+ S     ALI +  SGW
Sbjct: 93  ----VAGISGLLFGYDTGVISGALAVLGSDLGHVLSSGQKELITSATSFAALISATTSGW 152

Query: 135 VADGVGRRRAFQLSALPMILGHSFAATD---------IILSNISSGIFCQLVLAKVIPVE 194
           +AD VGR+R    +    ++G    A             +     G+   +V   +  + 
Sbjct: 153 LADWVGRKRLLLCADAIFVIGSVIMAASRNVAMMVVGRFIVGYGIGLTSLIVPMYITELA 212

Query: 195 PSKC-GRVVESY-----GGLTRGSGLNGNFESFH 207
           P++  GR+V  Y     GG      LN  FE  H
Sbjct: 213 PARLRGRLVIIYVVFITGGQLIAYSLNAAFEHVH 236

[Close]
BLAST of Lsi06G008550 vs. TrEMBL
Match: A0A0A0LYE9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G696460 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 1.9e-61
Identity = 127/153 (83.01%), Postives = 134/153 (87.58%), Query Frame = 1 

Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MWDRKREAFSTYKRLSLKDNS+SIDMEDNS        LQ+GKDFEASNPSWSLSLPHVL
Sbjct: 1   MWDRKREAFSTYKRLSLKDNSDSIDMEDNSAH------LQNGKDFEASNPSWSLSLPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATLTSFLFGYHLGVVNEPLE ISADLGFNGNT+AEGLVVSTCLGGALIGSLLSGW+ADG
Sbjct: 61  VATLTSFLFGYHLGVVNEPLEIISADLGFNGNTMAEGLVVSTCLGGALIGSLLSGWIADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSG 165
           VGRRRAFQLSALPMILG   +A    L+ +  G
Sbjct: 121 VGRRRAFQLSALPMILGAGMSAMTKTLAGMLLG 147

[Close]
BLAST of Lsi06G008550 vs. TrEMBL
Match: A0A061GLL3_THECC (Major facilitator superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_037849 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.4e-50
Identity = 107/155 (69.03%), Postives = 124/155 (80.00%), Query Frame = 1 

Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MW R+REA S YKRLS +D+S  +D+E+NS       LLQ+  D E++NPSW LS PHVL
Sbjct: 1   MWGRQREALSMYKRLSSRDHSTVMDVEENSA------LLQNSMDVESTNPSWRLSFPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VAT++SFLFGYHLGVVNEPLESIS DLGF+GNTLAEGLVVSTCLGGALIGSL SGW+ADG
Sbjct: 61  VATISSFLFGYHLGVVNEPLESISLDLGFSGNTLAEGLVVSTCLGGALIGSLFSGWIADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSGIF 167
           VGRRRAFQL A+PMI+G S +AT   L  +  G F
Sbjct: 121 VGRRRAFQLCAVPMIIGASMSATTKNLVGMLIGRF 149

[Close]
BLAST of Lsi06G008550 vs. TrEMBL
Match: A0A061GUF8_THECC (Major facilitator superfamily protein isoform 5 OS=Theobroma cacao GN=TCM_037849 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.4e-50
Identity = 107/155 (69.03%), Postives = 124/155 (80.00%), Query Frame = 1 

Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MW R+REA S YKRLS +D+S  +D+E+NS       LLQ+  D E++NPSW LS PHVL
Sbjct: 1   MWGRQREALSMYKRLSSRDHSTVMDVEENSA------LLQNSMDVESTNPSWRLSFPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VAT++SFLFGYHLGVVNEPLESIS DLGF+GNTLAEGLVVSTCLGGALIGSL SGW+ADG
Sbjct: 61  VATISSFLFGYHLGVVNEPLESISLDLGFSGNTLAEGLVVSTCLGGALIGSLFSGWIADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSGIF 167
           VGRRRAFQL A+PMI+G S +AT   L  +  G F
Sbjct: 121 VGRRRAFQLCAVPMIIGASMSATTKNLVGMLIGRF 149

[Close]
BLAST of Lsi06G008550 vs. TrEMBL
Match: B9RKN2_RICCO (Sugar transporter, putative OS=Ricinus communis GN=RCOM_1052190 PE=3 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.8e-50
Identity = 104/157 (66.24%), Postives = 123/157 (78.34%), Query Frame = 1 

Query: 10  FGMWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPH 69
           FGMW R+RE+ S YKR+  +D + + D+ED+S       L+Q+  D E +NPSWSLS PH
Sbjct: 12  FGMWGRQRESKSMYKRMPSRDYTKNSDIEDDSA------LIQNNMDAEVTNPSWSLSFPH 71

Query: 70  VLVATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVA 129
           V+ AT++SFLFGYHLGVVNEPLESIS DLGFNGNTLAEGLVVSTCLGGA IGSL SGW+A
Sbjct: 72  VVAATISSFLFGYHLGVVNEPLESISIDLGFNGNTLAEGLVVSTCLGGAFIGSLFSGWIA 131

Query: 130 DGVGRRRAFQLSALPMILGHSFAATDIILSNISSGIF 167
           DGVGRRRAFQL ALPMI+G S +AT   L+ +  G F
Sbjct: 132 DGVGRRRAFQLCALPMIIGASVSATTTTLAGMLVGRF 162

[Close]
BLAST of Lsi06G008550 vs. TrEMBL
Match: Q8GTR0_CITUN (Sugar transporter OS=Citrus unshiu GN=Sut PE=2 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-47
Identity = 103/155 (66.45%), Postives = 119/155 (76.77%), Query Frame = 1 

Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MW R+REA   YKR S +D S++ D+E+ +       L+Q+G + E +NPSW LS PHVL
Sbjct: 1   MWGRQREASMMYKRTSSRDRSSTFDVEETTA------LVQNGTEVENTNPSWKLSFPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATL+SFLFGYHLGVVNEPLESIS DLGFNGNTLAEGLVVS CLGGA IGS LSGW+ADG
Sbjct: 61  VATLSSFLFGYHLGVVNEPLESISLDLGFNGNTLAEGLVVSMCLGGAFIGSTLSGWIADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSGIF 167
           VGRRRAFQL ALPMI+G S +AT   L  +  G F
Sbjct: 121 VGRRRAFQLCALPMIIGASISATTRNLIGMLLGRF 149

[Close]
BLAST of Lsi06G008550 vs. TAIR10
Match: AT1G67300.2 (AT1G67300.2 Major facilitator superfamily protein)

HSP 1 Score: 174.1 bits (440), Expect = 9.3e-44
Identity = 93/135 (68.89%), Postives = 107/135 (79.26%), Query Frame = 1 

Query: 16  KREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKD--FEASNPSWSLSLPHVLVA 75
           +RE  S YKR S +D S  ID+ED+SG      LL++  D   E +NPSW  SLPHVLVA
Sbjct: 5   QRETSSMYKRTSSRDYSPMIDVEDSSG------LLENDVDNEMETTNPSWKCSLPHVLVA 64

Query: 76  TLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVG 135
           T++SFLFGYHLGVVNEPLESIS+DLGF+G+TLAEGLVVS CLGGA +GSL SG VADG G
Sbjct: 65  TISSFLFGYHLGVVNEPLESISSDLGFSGDTLAEGLVVSVCLGGAFLGSLFSGGVADGFG 124

Query: 136 RRRAFQLSALPMILG 149
           RRRAFQ+ ALPMILG
Sbjct: 125 RRRAFQICALPMILG 133

[Close]
BLAST of Lsi06G008550 vs. TAIR10
Match: AT1G79820.1 (AT1G79820.1 Major facilitator superfamily protein)

HSP 1 Score: 158.7 bits (400), Expect = 4.1e-39
Identity = 91/143 (63.64%), Postives = 105/143 (73.43%), Query Frame = 1 

Query: 24  KRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVLVATLTSFLFGYH 83
           KR+  K+  +++D  + +     GT    GKD    NPSW  SLPHVLVA+LTS LFGYH
Sbjct: 18  KRVPSKEFLSALDKAETAVRLPTGT----GKD--CGNPSWKRSLPHVLVASLTSLLFGYH 77

Query: 84  LGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVGRRRAFQLSAL 143
           LGVVNE LESIS DLGF+GNT+AEGLVVSTCLGGA IGSL SG VADGVGRRRAFQLSAL
Sbjct: 78  LGVVNETLESISIDLGFSGNTIAEGLVVSTCLGGAFIGSLFSGLVADGVGRRRAFQLSAL 137

Query: 144 PMILGHSFAATDIILSNISSGIF 167
           PMI+G S +A+   L  +  G F
Sbjct: 138 PMIVGASVSASTESLMGMLLGRF 154

[Close]
BLAST of Lsi06G008550 vs. TAIR10
Match: AT1G05030.1 (AT1G05030.1 Major facilitator superfamily protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.7e-21
Identity = 50/104 (48.08%), Postives = 70/104 (67.31%), Query Frame = 1 

Query: 63  WSLSLPHVLVATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGS 122
           W  + PHV VA++ +FLFGYH+GV+N P+ SI+ +LGF GN++ EGLVVS  + GA IGS
Sbjct: 76  WLSAFPHVSVASMANFLFGYHIGVMNGPIVSIARELGFEGNSILEGLVVSIFIAGAFIGS 135

Query: 123 LLSGWVADGVGRRRAFQLSALPMILGHSFAATDIILSNISSGIF 167
           +++G + D  G RR FQ+  +P+ILG   +A    L  I  G F
Sbjct: 136 IVAGPLVDKFGYRRTFQIFTIPLILGALVSAQAHSLDEILCGRF 179

[Close]
BLAST of Lsi06G008550 vs. TAIR10
Match: AT5G16150.1 (AT5G16150.1 plastidic GLC translocator)

HSP 1 Score: 86.7 bits (213), Expect = 2.0e-17
Identity = 60/172 (34.88%), Postives = 88/172 (51.16%), Query Frame = 1 

Query: 19  AFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVLVATLTSF 78
           +FS+ K  S++  ++S D ++    PL            +   S    LP V VA L + 
Sbjct: 70  SFSSVKARSVRAQASS-DGDEEEAIPL-----------RSEGKSSGTVLPFVGVACLGAI 129

Query: 79  LFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVGRRRAF 138
           LFGYHLGVVN  LE ++ DLG   NT+ +G +VS+ L GA +GS   G +AD  GR R F
Sbjct: 130 LFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGALADKFGRTRTF 189

Query: 139 QLSALPMILGHSFAAT---------DIILSNISSGIFCQLVLAKVIPVEPSK 182
           QL A+P+ +G    AT           +L+ I  GI   +V   +  + P++
Sbjct: 190 QLDAIPLAIGAFLCATAQSVQTMIVGRLLAGIGIGISSAIVPLYISEISPTE 229

[Close]
BLAST of Lsi06G008550 vs. TAIR10
Match: AT1G30220.1 (AT1G30220.1 inositol transporter 2)

HSP 1 Score: 52.8 bits (125), Expect = 3.1e-07
Identity = 35/109 (32.11%), Postives = 56/109 (51.38%), Query Frame = 1 

Query: 47  GTLLQSGKDFEASNPSWSLSL--PHVL----VATLTSFLFGYHLGVVNEPLESISADL-G 106
           G ++  G D  A    +SL+   P+VL     A +   LFGY  GV++  L  I  D   
Sbjct: 3   GGIIHGGADESAFKECFSLTWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKS 62

Query: 107 FNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVGRRRAFQLSALPMILG 149
            + NT  + ++VS  + GA++G+ + GW  D +GRR A  ++    +LG
Sbjct: 63  VDRNTWLQEMIVSMAVAGAIVGAAIGGWANDKLGRRSAILMADFLFLLG 111

[Close]
BLAST of Lsi06G008550 vs. NCBI nr
Match: gi|659125538|ref|XP_008462735.1| (PREDICTED: probable plastidic glucose transporter 2 isoform X1 [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 5.5e-62
Identity = 129/153 (84.31%), Postives = 134/153 (87.58%), Query Frame = 1 

Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MWDRKREAFSTYKRLSLKDNSNSIDMEDNS        LQ+GKDFEASNPSWSLSLPHVL
Sbjct: 1   MWDRKREAFSTYKRLSLKDNSNSIDMEDNSAH------LQNGKDFEASNPSWSLSLPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATLTSFLFGYHLGVVNEPLE ISADLGFNGNT+AEGLVVSTCLGGALIGSLLSGWVADG
Sbjct: 61  VATLTSFLFGYHLGVVNEPLEIISADLGFNGNTMAEGLVVSTCLGGALIGSLLSGWVADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSG 165
           VGRRRAFQLSALPMILG   +A    L+ +  G
Sbjct: 121 VGRRRAFQLSALPMILGAGMSAMTKTLAGMLLG 147

[Close]
BLAST of Lsi06G008550 vs. NCBI nr
Match: gi|659125540|ref|XP_008462736.1| (PREDICTED: probable plastidic glucose transporter 2 isoform X2 [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 5.5e-62
Identity = 129/153 (84.31%), Postives = 134/153 (87.58%), Query Frame = 1 

Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MWDRKREAFSTYKRLSLKDNSNSIDMEDNS        LQ+GKDFEASNPSWSLSLPHVL
Sbjct: 1   MWDRKREAFSTYKRLSLKDNSNSIDMEDNSAH------LQNGKDFEASNPSWSLSLPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATLTSFLFGYHLGVVNEPLE ISADLGFNGNT+AEGLVVSTCLGGALIGSLLSGWVADG
Sbjct: 61  VATLTSFLFGYHLGVVNEPLEIISADLGFNGNTMAEGLVVSTCLGGALIGSLLSGWVADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSG 165
           VGRRRAFQLSALPMILG   +A    L+ +  G
Sbjct: 121 VGRRRAFQLSALPMILGAGMSAMTKTLAGMLLG 147

[Close]
BLAST of Lsi06G008550 vs. NCBI nr
Match: gi|659125542|ref|XP_008462737.1| (PREDICTED: probable plastidic glucose transporter 2 isoform X3 [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 5.5e-62
Identity = 129/153 (84.31%), Postives = 134/153 (87.58%), Query Frame = 1 

Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MWDRKREAFSTYKRLSLKDNSNSIDMEDNS        LQ+GKDFEASNPSWSLSLPHVL
Sbjct: 1   MWDRKREAFSTYKRLSLKDNSNSIDMEDNSAH------LQNGKDFEASNPSWSLSLPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATLTSFLFGYHLGVVNEPLE ISADLGFNGNT+AEGLVVSTCLGGALIGSLLSGWVADG
Sbjct: 61  VATLTSFLFGYHLGVVNEPLEIISADLGFNGNTMAEGLVVSTCLGGALIGSLLSGWVADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSG 165
           VGRRRAFQLSALPMILG   +A    L+ +  G
Sbjct: 121 VGRRRAFQLSALPMILGAGMSAMTKTLAGMLLG 147

[Close]
BLAST of Lsi06G008550 vs. NCBI nr
Match: gi|449449521|ref|XP_004142513.1| (PREDICTED: probable plastidic glucose transporter 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 243.8 bits (621), Expect = 2.7e-61
Identity = 127/153 (83.01%), Postives = 134/153 (87.58%), Query Frame = 1 

Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MWDRKREAFSTYKRLSLKDNS+SIDMEDNS        LQ+GKDFEASNPSWSLSLPHVL
Sbjct: 1   MWDRKREAFSTYKRLSLKDNSDSIDMEDNSAH------LQNGKDFEASNPSWSLSLPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATLTSFLFGYHLGVVNEPLE ISADLGFNGNT+AEGLVVSTCLGGALIGSLLSGW+ADG
Sbjct: 61  VATLTSFLFGYHLGVVNEPLEIISADLGFNGNTMAEGLVVSTCLGGALIGSLLSGWIADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSG 165
           VGRRRAFQLSALPMILG   +A    L+ +  G
Sbjct: 121 VGRRRAFQLSALPMILGAGMSAMTKTLAGMLLG 147

[Close]
BLAST of Lsi06G008550 vs. NCBI nr
Match: gi|778664425|ref|XP_011660293.1| (PREDICTED: probable plastidic glucose transporter 2 isoform X3 [Cucumis sativus])

HSP 1 Score: 243.8 bits (621), Expect = 2.7e-61
Identity = 127/153 (83.01%), Postives = 134/153 (87.58%), Query Frame = 1 

Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MWDRKREAFSTYKRLSLKDNS+SIDMEDNS        LQ+GKDFEASNPSWSLSLPHVL
Sbjct: 1   MWDRKREAFSTYKRLSLKDNSDSIDMEDNSAH------LQNGKDFEASNPSWSLSLPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATLTSFLFGYHLGVVNEPLE ISADLGFNGNT+AEGLVVSTCLGGALIGSLLSGW+ADG
Sbjct: 61  VATLTSFLFGYHLGVVNEPLEIISADLGFNGNTMAEGLVVSTCLGGALIGSLLSGWIADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSG 165
           VGRRRAFQLSALPMILG   +A    L+ +  G
Sbjct: 121 VGRRRAFQLSALPMILGAGMSAMTKTLAGMLLG 147

The following BLAST results are available for this feature:
BLAST of Lsi06G008550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PLST2_ARATH1.7e-4268.89Probable plastidic glucose transporter 2 OS=Arabidopsis thaliana GN=At1g67300 PE... [more]
PLST3_ARATH7.2e-3863.64Probable plastidic glucose transporter 3 OS=Arabidopsis thaliana GN=At1g79820 PE... [more]
PLST1_ARATH3.0e-2048.08Probable plastidic glucose transporter 1 OS=Arabidopsis thaliana GN=At1g05030 PE... [more]
PLST4_ARATH3.5e-1634.88Plastidic glucose transporter 4 OS=Arabidopsis thaliana GN=At5g16150 PE=1 SV=2[more]
ITR2_SCHPO4.3e-0627.10Myo-inositol transporter 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843... [more]
BLAST of Lsi06G008550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LYE9_CUCSA1.9e-6183.01Uncharacterized protein OS=Cucumis sativus GN=Csa_1G696460 PE=3 SV=1[more]
A0A061GLL3_THECC3.4e-5069.03Major facilitator superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_037849... [more]
A0A061GUF8_THECC3.4e-5069.03Major facilitator superfamily protein isoform 5 OS=Theobroma cacao GN=TCM_037849... [more]
B9RKN2_RICCO9.8e-5066.24Sugar transporter, putative OS=Ricinus communis GN=RCOM_1052190 PE=3 SV=1[more]
Q8GTR0_CITUN1.6e-4766.45Sugar transporter OS=Citrus unshiu GN=Sut PE=2 SV=1[more]
BLAST of Lsi06G008550 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G67300.29.3e-4468.89 Major facilitator superfamily protein[more]
AT1G79820.14.1e-3963.64 Major facilitator superfamily protein[more]
AT1G05030.11.7e-2148.08 Major facilitator superfamily protein[more]
AT5G16150.12.0e-1734.88 plastidic GLC translocator[more]
AT1G30220.13.1e-0732.11 inositol transporter 2[more]
BLAST of Lsi06G008550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659125538|ref|XP_008462735.1|5.5e-6284.31PREDICTED: probable plastidic glucose transporter 2 isoform X1 [Cucumis melo][more]
gi|659125540|ref|XP_008462736.1|5.5e-6284.31PREDICTED: probable plastidic glucose transporter 2 isoform X2 [Cucumis melo][more]
gi|659125542|ref|XP_008462737.1|5.5e-6284.31PREDICTED: probable plastidic glucose transporter 2 isoform X3 [Cucumis melo][more]
gi|449449521|ref|XP_004142513.1|2.7e-6183.01PREDICTED: probable plastidic glucose transporter 2 isoform X1 [Cucumis sativus][more]
gi|778664425|ref|XP_011660293.1|2.7e-6183.01PREDICTED: probable plastidic glucose transporter 2 isoform X3 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
IPR005829Sugar_transporter_CS
IPR005828MFS_sugar_transport-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044699 single-organism process
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0022891 substrate-specific transmembrane transporter activity
molecular_function GO:0022857 transmembrane transporter activity
molecular_function GO:0005215 transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G008550.1Lsi06G008550.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005828Major facilitator, sugar transporter-likePFAMPF00083Sugar_trcoord: 70..153
score: 4.7
IPR005829Sugar transporter, conserved sitePROSITEPS00216SUGAR_TRANSPORT_1coord: 125..142
scor
IPR020846Major facilitator superfamily domainPROFILEPS50850MFScoord: 69..215
score: 12
IPR020846Major facilitator superfamily domainunknownSSF103473MFS general substrate transportercoord: 57..157
score: 6.93
NoneNo IPR availableGENE3DG3DSA:1.20.1250.20coord: 68..153
score: 1.
NoneNo IPR availablePANTHERPTHR23503FAMILY NOT NAMEDcoord: 50..166
score: 1.1
NoneNo IPR availablePANTHERPTHR23503:SF37PLASTIDIC GLUCOSE TRANSPORTER 2-RELATEDcoord: 50..166
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi06G008550Cucumber (Gy14) v2cgyblsiB075
Lsi06G008550Cucumber (Gy14) v2cgyblsiB120
Lsi06G008550Melon (DHL92) v3.6.1lsimedB417
Lsi06G008550Melon (DHL92) v3.6.1lsimedB427
Lsi06G008550Melon (DHL92) v3.6.1lsimedB440
Lsi06G008550Silver-seed gourdcarlsiB037
Lsi06G008550Silver-seed gourdcarlsiB115
Lsi06G008550Silver-seed gourdcarlsiB518
Lsi06G008550Silver-seed gourdcarlsiB818
Lsi06G008550Cucumber (Chinese Long) v3cuclsiB089
Lsi06G008550Cucumber (Chinese Long) v3cuclsiB142
Lsi06G008550Watermelon (97103) v2lsiwmbB358
Lsi06G008550Watermelon (97103) v2lsiwmbB378
Lsi06G008550Watermelon (97103) v2lsiwmbB385
Lsi06G008550Wax gourdlsiwgoB474
Lsi06G008550Wax gourdlsiwgoB508
Lsi06G008550Bottle gourd (USVL1VR-Ls)lsilsiB057
Lsi06G008550Cucumber (Gy14) v1cgylsiB165
Lsi06G008550Cucumber (Gy14) v1cgylsiB541
Lsi06G008550Cucurbita maxima (Rimu)cmalsiB074
Lsi06G008550Cucurbita maxima (Rimu)cmalsiB145
Lsi06G008550Cucurbita maxima (Rimu)cmalsiB182
Lsi06G008550Cucurbita maxima (Rimu)cmalsiB735
Lsi06G008550Cucurbita moschata (Rifu)cmolsiB060
Lsi06G008550Cucurbita moschata (Rifu)cmolsiB129
Lsi06G008550Cucurbita moschata (Rifu)cmolsiB172
Lsi06G008550Cucurbita moschata (Rifu)cmolsiB725
Lsi06G008550Cucurbita pepo (Zucchini)cpelsiB300
Lsi06G008550Cucurbita pepo (Zucchini)cpelsiB557
Lsi06G008550Wild cucumber (PI 183967)cpilsiB079
Lsi06G008550Wild cucumber (PI 183967)cpilsiB130
Lsi06G008550Cucumber (Chinese Long) v2culsiB080
Lsi06G008550Cucumber (Chinese Long) v2culsiB131
Lsi06G008550Melon (DHL92) v3.5.1lsimeB405
Lsi06G008550Melon (DHL92) v3.5.1lsimeB418
Lsi06G008550Watermelon (Charleston Gray)lsiwcgB354
Lsi06G008550Watermelon (Charleston Gray)lsiwcgB377
Lsi06G008550Watermelon (97103) v1lsiwmB412
Lsi06G008550Watermelon (97103) v1lsiwmB419