Lsi06G008310 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAAGGTACGTTACACATACAATAATAAAATAGTTGAGAAGGATGTTTACGAAAGTGCTTCGATTATTTACGACATGAATAGCGTGAAGCAATCGAGTTTTGGCGACGAAAGTTGTAACGTTGTTAGAAAGTGTATCTGTCCACGAGTAATGCGTGGGAATTTATGCCCACGAATTTTGTTGCGCGGGCAGAAAACGATTTTGTTAGTTGCGTGGCCAGAAAGACTTTTATGCCCACGTGTTTTATTACGTGAGCATTTCTGCCGACGCAACGTCAAAATGCGTGGCAGAAGCTCTGCCCACGCAAAAAAAGTCGATAGAGGTTTTTTCCACACTTGTAGGAGGATCCGCTGACGTTTTCTTGCATGCGTAGAGACAAAAATGCTTGTAGTGAAAATAACTAATATTTACGTCTTCCACTATGTTATTTAATTGATTTATAATATTTTATAGTCTCATTTATAGATGCCCACTTTTCCATGAGGACGGGCCCGCCGTGATCCAGCCTGAATGGGGCAGAAATTTCCATTTAGGCGCGAAATGAGGGAGAGAGTGAGAAAAAAATTTCCGAAAAGCTAAATGGGGACAAGGACGGGGATGGACCCCATTTCATGTCCTCGCCTTGTTAGACTTTTTTTTTCTTATATTTATTATAATAATTTAATATTGTCTTATTTATTTTTATTATACAAATATTATATTTAATTTTAAAGTGTTATTGTTTTATAGTCAAAATAATGAATATGTTTGAATTAGCGTAAAAAGATAGGTTTAAATTCTAATAAATTTAGATTATATATATAAATAATTTAATAAATATTTATTTCCTACAACTTGAAAATTTTGAATAATTTTCTCTTTAAATTATAATTGTTTACTTGGAACTAATCATATAAAAGTTAACCATTTAATTGAAATTTTTTCATAATAATGATTTATGTTAATTGATTTTTTTTAAAAGTCAAATAGAAAAAATTCTCGAGGAATCCACGCCCCGAATTTGGCGGGATGGGGAGCGGGGAAGCAATTTACTGGCCTGTCCTGCCCTATAAACATCTCTAGTCTCAAGAAAACTTTCGTTTAGAACGCACGGAAAGAAACAAAAGGGGCAGTCTCTCTCTCATCCACTAGCCTCCGACCGCCACATGTCCGCCAATGAGTGTTTTCCGTCCCTACCCACTTCTCCGTCCGTCTCTCTCAAACTCGCTCTTTATTCAGTTTTTGCCATTGTCGCCCGTCCCCGACGCCTTCTCTACCATGAGCAGCCGTTTCGTTGAGCACATGGACACTGCCGCCAGACTGCCACCGTATTGATCCTACCGTGGGTGAAAGTTTGGTGAGTTTCTCTCATGGTTTTCTTGTTTAATCTTGAATACTCAAAACATATGGAAAGATAGATCTATCTTTATGCATCTCACTTACATCACTTATAAAAATAATTCAAATATTTAAAAAAAGAAATTAGAAGAATTTTCTACATGAATTTGATAGGATGCACAAATTTAAATACTACTCAAGATGTACTCAAATATTTTTTTTTATTTTAGTATATAAATTTTAGGTTTTTAATGAATAAAATGCAAGTGAATCTATTTTTTTTTTTTTTTTTAATATATAAGGTGGAGTATGAAACACCTAACCTTGAAGTCAAAACTTTAAGTTTGTTGAGCGGCTATTATCTTTAGAGCAGCTTCATCATTATAGTGTATAAATTTTAGGTCAAATTAAAATTGTAGTTTAAAAATTAGAATTAATCTCTAAAATTTGATAAAAATTCCAAAAACTATTTATGAAAGTTGTATTAAATAAAGCAGAACTAAAATTTAACTTCCTCCAAAATTATATTTTAAGGTAAATTTTATGTTTGTTTGTTGGTTACAAAATATTGTTAATTTTGATCTCATCACGGGTAAAACACGGTTGAATGGTAATAAGAAAGTGTCTAATGATGTGCACAAAACAACTTCAACTCTTTGTGTTATGAGAAGAAGTGAGGAAGTATTTAAGGCATTGGAGCCAACATGTCATTTCACATATCATCAGAGAAGATATAGGAAATCAATTTCCAGGTTTAACTTCAACTTCCACTTCCATAGTCAACGAACAACCTCTCAAACTCAACGACAATGAAAATGCAACCTTGGAGTTGGCGGAATTTGGTGGAGCTCCCACGATAATAATGCCACCGATGCCGGCGATCGTGAACATAATCAAAACGTGTAGCCCACTGTTTTCGAAGCAAATGACAAAAGCTGACTTGGCAGATGGACAAGGGCGATTGACACTTAAAAAAAATTTGTTATATGTCATTTGGCTCCCATGTTCAATGACAGCGAGAACCTGAGTGAGGGAATTGATGTTATAGTTTTTTATAGTGAACGAAGAGAATACGACATGACGTTCAAGGTTTGGACTTCTAAATTTTATGTGCTCATGAAAGGTTGGAAGGAGTTTTACAAGACCAATAATTTAACTCAACCTGGTGAATACATCACCGTTTGGATGTTTCGATATATCGATCTTCACAAACTTTGCTTGCTATTACTCGAGGAAGAGTTGAAGGGCATTGAGCTTCTCTCGACCTCCTCCATCTTTGCATCTTGGCCCATTGGACTACTTTCTTTTTTAATTATTATTCTTTTTTAAAATAATTCCTCATTTTTTTTAAGTCGATAAATATTGTGGGGTGAACATTATTTTTTTTTTTTTAATGTTTTACTTTAAATTTTTAGTTCATCATTACTAGTTTCAAATCTTTGAGCTAGTCAGGATATTTGTTTATTTCAATTCAGCTATTCTAATTGTTATGTTCTTTTCTTTTTTATTTTTTTTTTTTTAATGTTTTACTTTAAATTTTTAGTTCAACATTACTAGTTTCAAATCTTTGAGCTAGTCAAGGATATTTGTTTATTTCAATTCAGCTATTCTAATTGTTATTTTCTTTTCTTTTTTATTTTTTTTATTAATATATAAGTGATTTTTCGCCTATTTCTTTAATTTGTTATTAATTTAGTACCATACTTTTACTTAAGTTTATTTTAAATAGTAAATTGATTCGCTTATAAAAGTTAAGATCTTTTAATTACGAATTTAGTACTATACTTTTTACTTAAGTTTATTTTAAATAGTAAATTGATTCACTCATAAAAGTTAAGATTTTTTAATTAAAAATTTAAGATTTTAATTGATGTAGCCATTAATTTCAGTGGTTACGTATTTTCCTTTAATGATAGAGGTTTAAATTCAATCACTTAA ATGGTTAAGTTTTTGCCATTGTCGCCCGTCCCCGACGCCTTCTCTACCATGAGCAGCCGTTTCGTTGAGCACATGGACACTGCCGCCAGACTGCCACCAGAAGATATAGGAAATCAATTTCCAGGTTTAACTTCAACTTCCACTTCCATAGTCAACGAACAACCTCTCAAACTCAACGACAATGAAAATGCAACCTTGGAGTTGGCGGAATTTGGTGGAGCTCCCACGATAATAATGCCACCGATGCCGGCGATCGTGAACATAATCAAAACGTGTAGCCCACTGTTTTCGAAGCAAATGACAAAAGCTGACTTGGCAGATGGACAAGGGCGATTGACACTTAAAAAAAATTTTGAACGAAGAGAATACGACATGACGTTCAAGGTTTGGACTTCTAAATTTTATGTGCTCATGAAAGGTTGGAAGGAGTTTTACAAGACCAATAATTTAACTCAACCTGGTGAATACATCACCATTTTAATTGATGTAGCCATTAATTTCAGTGGTTACGTATTTTCCTTTAATGATAGAGGTTTAAATTCAATCACTTAA ATGGTTAAGTTTTTGCCATTGTCGCCCGTCCCCGACGCCTTCTCTACCATGAGCAGCCGTTTCGTTGAGCACATGGACACTGCCGCCAGACTGCCACCAGAAGATATAGGAAATCAATTTCCAGGTTTAACTTCAACTTCCACTTCCATAGTCAACGAACAACCTCTCAAACTCAACGACAATGAAAATGCAACCTTGGAGTTGGCGGAATTTGGTGGAGCTCCCACGATAATAATGCCACCGATGCCGGCGATCGTGAACATAATCAAAACGTGTAGCCCACTGTTTTCGAAGCAAATGACAAAAGCTGACTTGGCAGATGGACAAGGGCGATTGACACTTAAAAAAAATTTTGAACGAAGAGAATACGACATGACGTTCAAGGTTTGGACTTCTAAATTTTATGTGCTCATGAAAGGTTGGAAGGAGTTTTACAAGACCAATAATTTAACTCAACCTGGTGAATACATCACCATTTTAATTGATGTAGCCATTAATTTCAGTGGTTACGTATTTTCCTTTAATGATAGAGGTTTAAATTCAATCACTTAA MVKFLPLSPVPDAFSTMSSRFVEHMDTAARLPPEDIGNQFPGLTSTSTSIVNEQPLKLNDNENATLELAEFGGAPTIIMPPMPAIVNIIKTCSPLFSKQMTKADLADGQGRLTLKKNFERREYDMTFKVWTSKFYVLMKGWKEFYKTNNLTQPGEYITILIDVAINFSGYVFSFNDRGLNSIT
BLAST of Lsi06G008310 vs. TrEMBL
Match: A0A0A0L7L0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G073910 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.1e-22 Identity = 74/170 (43.53%), Postives = 86/170 (50.59%), Query Frame = 1
BLAST of Lsi06G008310 vs. TrEMBL
Match: A0A0A0LC65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G609250 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.0e-15 Identity = 48/104 (46.15%), Postives = 57/104 (54.81%), Query Frame = 1
BLAST of Lsi06G008310 vs. TrEMBL
Match: A0A067L9U6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15047 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.9e-10 Identity = 56/190 (29.47%), Postives = 80/190 (42.11%), Query Frame = 1
BLAST of Lsi06G008310 vs. TrEMBL
Match: M5VX51_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015816mg PE=4 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 9.3e-09 Identity = 39/130 (30.00%), Postives = 64/130 (49.23%), Query Frame = 1
BLAST of Lsi06G008310 vs. TrEMBL
Match: B9N1E3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s40760g PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 4.6e-08 Identity = 37/131 (28.24%), Postives = 63/131 (48.09%), Query Frame = 1
BLAST of Lsi06G008310 vs. NCBI nr
Match: gi|700200968|gb|KGN56101.1| (hypothetical protein Csa_3G073910 [Cucumis sativus]) HSP 1 Score: 114.8 bits (286), Expect = 1.6e-22 Identity = 74/170 (43.53%), Postives = 86/170 (50.59%), Query Frame = 1
BLAST of Lsi06G008310 vs. NCBI nr
Match: gi|659071538|ref|XP_008460492.1| (PREDICTED: uncharacterized protein LOC103499291 [Cucumis melo]) HSP 1 Score: 106.7 bits (265), Expect = 4.4e-20 Identity = 63/154 (40.91%), Postives = 79/154 (51.30%), Query Frame = 1
BLAST of Lsi06G008310 vs. NCBI nr
Match: gi|700203164|gb|KGN58297.1| (hypothetical protein Csa_3G609250 [Cucumis sativus]) HSP 1 Score: 91.7 bits (226), Expect = 1.5e-15 Identity = 48/104 (46.15%), Postives = 57/104 (54.81%), Query Frame = 1
BLAST of Lsi06G008310 vs. NCBI nr
Match: gi|802546570|ref|XP_012085562.1| (PREDICTED: putative B3 domain-containing protein At4g03160 [Jatropha curcas]) HSP 1 Score: 73.6 bits (179), Expect = 4.1e-10 Identity = 56/190 (29.47%), Postives = 80/190 (42.11%), Query Frame = 1
BLAST of Lsi06G008310 vs. NCBI nr
Match: gi|595821215|ref|XP_007204780.1| (hypothetical protein PRUPE_ppa015816mg [Prunus persica]) HSP 1 Score: 68.6 bits (166), Expect = 1.3e-08 Identity = 39/130 (30.00%), Postives = 64/130 (49.23%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |