Lsi06G008020 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G008020
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Pseudouridine synthase
Location	chr06 : 16764356 .. 16784865 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCAAGCTAGATCCTCCAACAGAAAGAAATAAGCTAGTGAAGGTTGGTCCCCAGTCCTAGCACTCAAAATATGATCCTAGAGATTTTTCTACTATTACTTATTATTGGCCGAGCCTGGTATTTGTGGTTTACGTGCCAACTTGGTCCATTTTGGGTGGGGTTATTTTATATTGATGAACACCAAATACCCTTGCAATTTATACAATAGTAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTATATATATATATATATATATATATATATATATATATATATATATATATATTAGAAACTGAACTTTTATTGAGAAGAAAATTAAAATAATTCAACTACAAAAAAGAGCCAAACTGAAAAAGGGACTTTAGTCAAGTAAAATAAGACCTAAATAAGACGTAAATGATATTTAAAAAATAACTTCATCATTGAAACCCAAAGTGAAACATGGAATCTTACCATAGGACGAGACATCATGCAAAGATCTCTTAAGCCTTTTAAATATTATGTCATTTCTCTCTCTCAAAAGATTTCACAAGATCATACAAATCTTGACTCATCGCAAAAACTTTCCTTCATCATGGAGTGGTGAGTGAAGAAGTAATTCCTTGATTGCCTCTCTACAACCTTGAGATTTGAGTCATTTGACAAATCACAAGTCATACCTCTCTGGAATTAGGATCCATATACTTTTTCCCAGTTTCTATCTATTTCTGAACAAAACTGTAATCTCATTTTGAATCCATCTTGTGGCAAGTTGATGTGAATTGTATATTTGTGGGTCTATGCATTCTCTTAGTAAATTTTTGGAACTGGATATTTTTCTCTACATACGTTATTGAAATTAATATTAGTCTTGAAATCTGACAGACTGTAACTGCAGAAGATATCCTCACTGGAAACTTTACTATTAATGACGTTGTTCTTCCGTTGCCTGGGTGAGGGTAGAAAATATTTCTGACCTGTTGAAAATTTATTTTGGTCTTTTAGTTGTTGTTAACGTAGTTATTTGATTTATTTGTTTGTTTATTTCAACAGGTCAAGAGTAATCTATCCCACAAATGATATTGCTGAAGTGTATAATGATTTAGCAACTAAGGTCCTTTATTATTCTTAGCTTCTATTAAGTATCTTTCTTTATGTCAAAATATCCTAATTTTTTCTTTCTATGTTGTGTTTTATATTGTACTTTCTCGTTGATTTAATTTAGGATAAAATACACTTTTGGTCCTTGAGGTTTGAACTTGATGTCTATTTGGTCTTTGAAGTTTCAAAAGAGACTTTTTAACCCTTGAGATTTGAGAAATGGTTCTAAAAGTCCTAAGCTCATTTGACTGTTAGTTGACCTAATGAAAATATAATGTGGCAGTTAACTAGTTGATTGGACTATAGATGACATGGAAACTTTAAATGAGATGGAAAATATATAATTTTTATACTATTATTTTATGATCGGGTCTTTCCATCTCCACCTTCTCCTTCCATCCCCTTCTCCATTCCTCCCCCTCTCTTAAGCATCCTTTGGTTCCAACTCCCAAGTTGTTTAAGAGAGTAATTTCTATTTGGGCAATAGGCCCCAAGTTAGCATTAGCAACTAGGATTAAACTACATGACCACCACTGAAAATGAAAAGAAAAGTATAGACAAAGAAAAAGCTACATGTATTCTTTCTAGTGCATGTACTATGTGCTTACCACACTTGGTGCAAACCTAAAAGCATCCATGTAACTATTTTAGCTACATGGTTAGTTTGCATAATAGTATTAAATTTCCATCGACATGTCGATATTTCAACATTTCCATTTGTTCGATATCGATAAGAGGGATGAATCGATATTTCCATTGTATCGTAGAAAAATCCACGAAACACAAAAAATAAGCATCAATATGTCACTAATATAAATATAATATAAATAATAGACATGTTTACTTATTTGAAAATAATAAAATGTTTATTTCCTATTTTAAATTTATTTTTTTATTTTTATAATTTTTTCATAAATATCCATCGAAATCGATATTTTATCGAAATTTCCATAAAATTAAGACCTCAATATTTCCATTGATATCGATATTTTAAACCTTGGTTGGCATGCAGAATAGAAATTGATGGAAAACTTGAAGAAATCTTTCTTTATTGAGTTGAAAAAGCTGAGAACCTAATATTCAAGTAGTCTTCCATGCTTTCGAGAGGTTTGGTGATGGAAACTCAAATAAGACTTAAGAAAATATTATTCATCAATTCGAAAAGAGAGTTACATCCAGATTATATAGAAAGTATACAGCTGGGCAAGTTGTAACTAACACAACTAAATCTCCAACAACAAAACTCTTCTCCCTTCTTTGTTTATTACTCTGCAGCAGCCTTACGTTGTTGGCAGCTTCTAACTGAGCATGGACACTTTTGTGAAGTTCAACAATCCTCTCAGCCAGATGTCTTAGGGCTTTTAGTAGCTCTCTGTCTTCTTTCGAATATTTTGTTATGCATTTTGAGCATTAGACTCTTTCCATTATATCAATAAAAAGTTATGTTTCCTTTTTAAGAAAACAATCCTCTCGGCCATTTCTTCAGCTTCACAACTAACATCAACAGATGAAGGAATGTTAGCAAGGTCAACAGTTAGTCTACGTAAATGAATAAAAACTATCTCAAATGGTGACTTCCCTGTAGACTTGTTCTTCATGTGGTTAAATGAGTGTAAACAATCTCAAATGGAAAACCAAGTACAAAGCCCATCGAGAGGTCTTCTGATGTAGCCTAAAGAGATAACAAAGAGAATTCTCTCCAAGAATCAATATTGTAGATCTTTATTAGAATGAATAATATGTTTGATACAAGAGGGGAAGGTTCCTATTTATAGAGCTTTATTACAAGTGGGGGTAAAAAAGGAATTAACCTAGAATATTAACTAATTACCCAATTAACCCCTATTCTTCCTACATCATTCTACCCCTCCAAAAAGAAAACTCGTCCCCGAGTTTTAAAAAGAAAAAAAAAATGAAGCAAACAAGGTATGAAATAAACTTGTTCAATGGAGTATGACCAAACCATTCTCCTACATTTTGAACAAAAATATTATGATCAAAGTGATAAATTCGAGACAAAAAATCCAATATTGTCACCAAAAGATGAACTTCTCCATTGGCCATAAACTCAAAAAAGATGTTTCCTTCAAGCTCATTCAAAACTGTATTCAAAGGACCAATCACTAAAAAACCACCTTCCAAAGATAATTGTTCAAGAATCACGTCTTCTTTATCATTCGCTTCAAGTTCTTCAACTGTTTGGTGATCCATTTCGAAATCAATCAATGTGTCATTGTTCTTGCTTGATTCTTGCTTAGTGTTTGGTACTTCTATTCCATCTTCTTTGTTTGATTTTTCTTCTTTACTTGAGACAATTTCTGAAATAACATCTTTAAATTCTTCTTTTTCTTTTTCTTCTTCTACTTCGTTCTCATGATTTTTGTCCCAATCACCTCCATTAACTACATGGGTCTCAACAAGATTTTTTCCAATTTTATCTTCAAGATTTTGTAATTGAAAAGTTTTCAACTGTGATTCCTTTGTGTTTTCTTCTGTATATGAAATCAATCCACTCTTGAACTCTTGCAAATGAATTGATAAATGATCAATATGTTGAGTCATTTTTTCCAATGAACATTGGATTTCTTTTATTGGTTTCTTTATTTTCTCCAATGCTACGGGATCAAAGTAGACATTTTGTTGAATTCTTGGATATGTTTCAATCTCGTCGTGGGTATAGAACTCAACCATTGATTTTCTTGAATCAATCTTTCTTGATTGTGTTTCGTAACCAAAAGAATAATTTCGAGTCTTGAACATTCTTCTTAGGCTATAAAAGTCCATTCTTGATGATTCTTGATGATTCTTTAATTCATCTAACTCCCAATCTTTATGTTGATTTCTTGAAAAATGGGTTTGATTGGATCGTTGAGCCCTTTTTCGATGTTGTCGCCTTCTTATTTCATCCCAAACTGACTTAGAAACGTCTTCGGAGTCACTAGAATCAAGTTTCCAATGTGGGTAATGCATATGATAGGTTCTTTGAGAAAATCGAGCATGGGCAAAATTAGTATGTTGAAATTCTTCTTCTGAATCACTTGAGTCTGAATCCCAACATTGTTTTTGGAAGTAAAATTGATTATCTTGCCTATAACAACTGCTGGTTTTTTTCTTGAACATCTTCTTTGATCGGTAATAATCCATTCTTGCAAAATCTTGAAAAATCTTTGGGTTGTTCTTTCTTTCTTGGAATTTCAAGGGATCCCCCTAATTAGATGTGGGTTGTTTAGCAACGAGCACAACTCACGAAGCTCCCTCTTGTGACCGTCGTCACCAAGAGTTTCTCGGTCTTCCACCAGCGGCAGTCAACGTTGGCCCAGACGGTCGCTCTGATACCAAATTGATGTAGCCTAAAGAGATAACAAAGAGAATTCTCTCCAAGAATCAATATCGTAGATCTTTATTAGAATGAATAATATGTTTGATACAAGAGGGGAAGGTTCCTATTTATAGAGCTTTATTACAAGTGGGGGTAAAAAAGGAATTATCCTAGAATATTAACTAATTACCCAATTAACCCCTATTCTTCCTACATCATCTTCCTAAATAGTGTGTGGGATAGGCAATGGTGTGTATAGGCTTGTGTTTTGAAAAGATCCTTTACATGTCTAATGAATATAACAATGACGAATGAAGTTGGAGACATCACGTTGGATTTTTGGCCAAAAAAATCGTTTAGAGAGATCTAAAGTCTTGTCTTGGCCAAAGTGTTCACCAAGACACCCTTGAGTGAATGTCTTTAGTTAGGACTTCATGGAGAGAGCCAAAAGAAATGCACAGTCGAATAGGGAGATCTTTATTTCGACCAAAATATTCCCGACTTCCTGTATCAAATATATCTTTTCAGTGTAACTATCCTTGGCCATTATTTCAGAGCATAGTTTACATATCTAACTCCCTTTATCTATTTCTCTCTCTTGTACGCATATAATTGTAAATGGTCGGAAGGTTATTTTTCTAAAGATGTGCACAAAAACAAAGCATTCATGTTATCTATGCTCATACTTCTTGCTCATTTTCATCAAATTCAAGATCTCTTAGAGTGTTTATAGCTTTCAATAGCACTCTTCAGTACATTAATGACCCATAAGTATGTCACTTCGTAACTATTTTGCAAGTTAGATGATAATGATTACACTTTTGGGGAATGATGGTGAAGTTAAGAAGCACATATACGAAACACAAGATATGGATATGAGTACAACATGACACAAACACAGGGACACATCATTATTTTTAAATCCAAGACATGGCAAGAACACGTTTATTAAAATATACATTTTTAAACATGATGTAGCCTAAAGAATAAAAAGGAGATAATTATGAATCAAAACTTATCAAAAGGAGAATAGAAATCTTTATTATGAATCAAAAGTTATCAAAACAAGAACACAATCCTTCTATTTATAGAGAATTGGAAAGCAAACTAATCTATCCTAATTAATCAAAGAAACTAATCCTAATCCTAATAAACTAAGGAAACTAATCCTAATCCTAATCAATCAATGAAACTAGTCAATTAAGGATTTGACCAAGATACCCTACTTTACCCTAATCCTACTACATCGTTCTATCCCTCCCAAAAAAAACTCCTCCTCGAGTTTCAAAAGGAAAATGAAGAATACAAAGTTTTTGTTTTTGTTTTTCCATGATTTGTAAAATTTCCAAATAAAAACGTTAGCCTGTGTAAATCTTGCACTGCAACTGCAACTACAAAGATTGAAAGAGCCCATAAAAAATCTGAGAACTATGTAGAGCATGACTGTCATCAAAATCTTTCTTTGGTTGTGGAGAATTATATGCACGCCACCCACTAAAATTTTGCTCAATCATTATAGTCAAAGTTGGAGTATCAAAGCAATCCATAAACCCATTTGAAAATTTGTTGTTGCATAACCCAGAATTTGTGAAGAAATGAGTTGAAATAAACTCACGAAAAGGGAGGCAACAAATTGAAACTGGGAGGGACTGAACCCAGGTCGGATTGCATGATATATGCTAGGAATTGAGCACACATGTTGGGTTGAATCGCTTGGGTTGATTCAAATGGATCACGCGTTTCCATGTGTTCTTCTTCGTTGTCTTCCAAGCAATCAGCTACAACCAAAGATTCAAACTTCTTCAAATCGAGTTGCCCATGGTTGTCGTCTTCTTTGCCAAAATTACCTCCGTCTATTAATACGTCGTCTTTCTTGACATTTTTGTCTTTGCACGCAACAACACATGTTTCTTCGTTCTTTTCTTCCTCCTCTGTAACATTTGTGAATTCACGTGGGAACCTTAGAATCTTTCGTTCATGTGGCGGAAGTAATGGGTTAAAAATAGTCACACAACTTTTTCCTACGAACATTTTTTCATCCTCTTTGTTATATGCAATAACGCAAAAGGTTTTGTCGATTGATTTCCCCCCCGCCTCCCCCACGCGACTCCTGTAACTTTCTTTAACAATAGGTTTGATTCACCTTTGCCTTGGGTCATGTCACATTCATCTTTGTTTTTGCATGAATCTATTTCGTTTGTCTCTTCTTCTTCTTCTCCTTCATTCATTGCACGTCTTTTCTTCTTCTTCGTACTGTTGGTCTTTGCTTTCAGCTTGGGTTGCTTGAATTTCACTTGTGAGCTTCAATTGTGATTCATTGAACTTTTATTGTGCAGATTCACAACTTCGAGTGATTTCTAGCCTTTCTTGAACTTTCCCCAAAAGCCCCCAAATTGCATCCATTCCCTTCCGAAAATCTTCCTGACAAATGTTCTCATTTGAATATTTTTGTTTGAAAATGTTTCAACCACCATATTGGTGTTGGGATGATTCATGGGTGTTCTTAGATGTTAGTCATAATAATTTCTTTCACACTCTAAATCATTTAACTCCCAATTCTTATGTTGATTTCTTGAAAACCCGGTTTGATTCGATCCCCGGGCTTTTTACTGTTAATGTTGTTTTGTTATTTTGCCCCAAACTGCATTAGAATCTTCACCAGGGGCGCTAAAATCAAATTTTCAATGTGGATAATGATAGGTTTTTGTTGATTATTTCTTTTTTTATCAATATTTAATTGTATCTATTATGTTATATTTGCTGTATTTCTATTTTCCTTATTGTATTTATTTTTACCATATTTGTAATAGGAGTTTCTTTTATTTAAAAAACTTTTTTCCCTTCATAAGAATAACAAGAGAGGAAAATACATATTTTAAGCATGGTATCAGAGCGAAGAAAAAACCCTAAAAACTATCATAACCCTAGATTGAACCTCCACTGCCGCCGTCTGCCATACGCCGCCGCCCGCCATCCGTACGCCGCCGTCGCCGTCCGTGCACAGTACCTCAGCAGAGTGCGTCGTTTTTCTGCTCGCCATTCGGTCGTAAGGAGCTCGTCGTGGGTTTTTTGTTCTTTCTCCTTGGCTGTTCGTTCGTGGCTTGCATCGGTCGTGTCTGTGCCGTGGTACCTCTTTGGTTCAGCCGTAAGCCGCTGCGTCACTGTAACTGCCACCATGTCAGATGAAAAGGCACCTATTACAAAGGTTTCAGACAATCGAATCCACCTCAATCCTCCTACTGTCCAAATAACTTCTATTCAGACTTAATGGACATAATTTCCTTCGTTGGTCTCAAAGTGTTCGGATGTATATCCGTGGACAAGGAAAGATAGGCTATATTACGGGAGAGAAAAGCAACCCTCCTCCAGATGATCCATCCTTTGCTATATGGGATGCTGAAAATTCCATGGTCATGACGTGACTCGTTAACTCCATGGTTGAAGACATCAGCTGCAATTATATGTGCTACTCCACTGCAAAGGAATTGTGAGATAGTGTGACACAGATGTACTCTGATTTGGGAAACCAGTCACAAGTATTTGAGTTAAATCTCAAAATAGGAGATATGCGACAAGGAGGTCAATCAGTCACGCAATATTTTCACTTTCTTAAGAGAATCTGGCTAGATCTTGATCTCTTTGATACATATGAGTGGAAATCTACAGATGACCAAAAACATTACAGGAAAACTGTGGAGGACAGCCGTATCTACAAATTTCTTACTGGCCTCAATGTTGAATTTGATGAAATCCGAGGTAGAATTCTTGGGAAAATTATTTTTCCTACTATTAATGATGTTTTCTTTGAAGTTCGCAGGGAAGAAAATCGCAGGAATGTGATGATTGGAAAAAAACCTATGGAGTCAGTTGAGAGTTCTGCGTTGGTAACTGAACATACTGCCATGAAGACCTCTGATCATCCCAACAAGACACATGAAAATTCTCGGGTCTGGTGTGATCATTGCAATAAACCCCGCCATACACGTGAATTGGAAAAGTTCCAAACACAGTGAGAGAAATTTTCATCAGCATACCTCAACTGCAAATGTTGCTGAGTCTAATATGTTTAACAAGGAACAGATCGATCAAATCCTGAAACTGCTAAAGACTAGTTCTTCATCTGGTAATCCTAGTGTTTCCTTGGCACAATCAGGTAACTGTCCTCAAACCCTCTCTAGCTTACATTCATCTCCACGGATTATCGATTCTGGAGCCACTGATCATATGACTAGTTCCTCTTCTCTGTTTGAATCATACTCTCCTATATAGTAATGACAAAATTCGCATTGCCGATGGTAGTTTTGCCCCTATTGCGGGAAAAAGACATATTCCTTTGACCTAAAAAATTACTTTACGTTCTGTCCTTCATGTCCCTAAGTTAGCTTGCAATTTATTGTCAGTCAGTCAAATCTCTAAGGATACTAATTGCAGTGTTATTTTTTGTGGAACTCATTGTAACTTTCAGGATCAGGACTCGGGGGAGACGATTGGCAGTGCTAGAATGATTAATGGTCTCTATTATTTTGAGGATGAAGTTTCTTCTAGTAACACAAAAGTTCAGGGCTTGAGTAGTGTCAATTCTTCTTCTGTTCCAGAAACTATAATGCTTTGACATCGTAGATTAGGGTATCCAAATTTCTATTATTTAAAACATTTGTTTCCAAATTTATTTAAAGGGATTGATTGTTCTATTTTTTGGTGTGAAAGTTGCATTTTTGCCAAACATCATCGCTCCACTTATTTATCTAATCCTTACGAACCTTCCTCACCTTTTTCTTTAGTTCATACTGATGTTTGGGGTCCTTCTAAAGTTCTGACACATAGTGGTAAACGTTGGTTTGTCACCTTCATAGATGACCACACTCGTCTAACTTGACTTTATTTGCTAACCAAAAAGTCTGAGGTAAAAGAAGTCTTTGTTCGGTTTTACAATATGATTGAAACAATTTCAAACTAAAATTCGCATTCTTCACTCTGATAATGGTACTGAATATTTCAACAAACAATTACATACTTTCCTGCAAGATAAGGGTATTTTTCATCAAGCTACTTGTCGTGATACTCCTCAGCAAAATGGAATTGTTGAATGCAAAAATAGACATCTCCTTGAAGTTGCTCGTGCCCTTATGTTTTCTATGAATGTTCCGAAATATTTGTGGGGTGACGCAATTTTGAAAGCGACCTACTTGATCAATCGAATGCCAACCAAAGTTTTAAATTTTCAAACTCCTCTCAATTACTTTAAAGAGTCATTTCCTACTGTTAGGCTATTTTTTGACCTCGCAATCAAATTATTTGGTTGTCTTGCTTACGTTCATACTTCTCCTCTTTCTCGAACAAAACTTGACCCCCGAGCCATTAAATGCATTTTTGTAGGTTATGCTCCCAGTAAGAAGGCTTATAAATGTTTTGACCCTTCAACCAACAAGTTTTTTGAGAGTCTGGATGTTGTTTTCTTGGAAAATCAACCTTACTTTAGCCAAAATTCTCTTCAGGGGGAGATATCTAACCTTGAAGATAATTTTTGGGACACCTCACCTATCCCAAACGTCATTAATTTTGAAATTATAAGGTCTAGTCCTTTGATGCCTAGTATGGTAAGTTCCTCTTCAGGGGGAGAAACACTGCGAACTGTTGTGACTGGCCAACCACTTGAACTTCAGGTTTATACTAGAAGAAACTTGACTCAAAGGGATCGAGAACAGACAGTTGATCTATCACAGGACCAGTCTAATACTCCGATGAATGATCCTGAAGTTCCAGGTGACATACACTCTTCCTTTTCTCCCAGTTCTTCGTCTCATAATTCCTTAACTGAATTTTCTGACCTTGATATTCCAATTGCCCTTAGGAAAGGTACCCATAAGTGTATTAAATATCCTATTGCAAATTATCTTTCTTATCATAGATTGTCAGACAGTCATAAAGCCTTCACATCCAAAATAACCGACCTGTTTGTTCCAAGGAATATACAGGAGGCCCTAAACGATATGAATTGGAAATTAGCAGTGATGGAAGAAATGAGTGCGCTGAAACAAAATTGTACATGGGACATAGTTGATTTACCAAACGATAAAAAAACAGTGGGATGCAAGTGGGTGTTCACTGTCAAATGTAATGCGGATGGTAGTATTGAAAGATACAAGGCCAGATTGGTTGCTAAGGGGTTCACTCAGACTTTTGTTATCGGTTGCAGTTAATCTTGATTGGCCCATTTACCAACTTGATGTTAAGAATGCTTTTCTCAATGGGGATCTTGAAGAAGAGGTATTTATGGATCTGCCACCTGGCTTCGAGATGGATCTCGGGATTAACAAAGTGTGCAGGCTAAAGAAATCATTATACGGCCTTAAACAGTCTCCAAGAGCCTGGTTTGAACGTTTTGAAAAGGCAGTAACTAGCTATGGATTCAGTCAAAGTCAAGCCGATTATACTATGTTTTACAAGCATATAGAACAGGACAAAGTTGTGGTTTTGATCGTGTATGTTGATGATATAGTTCTTACAAGTAATGATGAGACAGAACTGATGTTTGTGAAGAAAAAACTGGCAAATGACTTCCAAATCAAAGACCTAGGAACCTTAAAGTACTTCCTAGGCATGGAGTTTGCCAGATCCAAAAGTGGTATTGTTGTCAACCAAAAGAAGTATGTTCTTGACCTATTAAAAGAGACAGGTTTACTTGGGTGTAAGGCAGCTGATACACCTATTGAGCAGAATCTGAAATTGGAAGCTGCAACTGAAAAAGAAATAAAAGAGAGAGAAAAGTACCAAAGACTTGTGGGGAGACTCATATATCTCTCACACACACGTCCTGACATCGCTTTTGAAGTCAGCATGCATGTTCATGCATGCTCCTGGAGCAGCACACTTTGATGCCGTCTATAGAATCTTAAGATATTTGAAGGGTACCCCTGGAAAAGACATATTATTTAGAAAACATAATCAACTAAATGTTGAAGTTTACACTGATGCAAATTGGGCAGGTAGCACCATTGATAGGAGATCCACTTCTGGTTATTGCTCCTTTGTTGGAGGAAATCTTGTGACTTGACGAAATAAAAAACAGAATGTGGTTGCGAGAAGTAGCGCTGAAGCAGAATTTAGGGCTCTAGCCCATGGTATTTGTGAGGGCATATGGATAAAAAGACTGCTAGAAGAAATGAGATTCTATCAGACAATTCCCATATGCATTTATTGTGATAATAAAGCATCAATTTCCATTGCTCACAATCCAATCCTTCATGATAGGACAAAACATATTGAAGTTGAAAAACACTTCATAAAGGAAAAGATTGATGCTGGAATAATATGCATACTCTATCTCCCAACAACAGAGCAAATTGCAGATGTGTTAACTAAAGGTCTTCCAAAGTGGCAATTCAATAACCTGATTGACAAGCTGGCTATGAATGACATCTTCCAACCAGCTTGAGGGGGAGTGTTGATTATTTCCTTTTTTATCAATATTTAATTGTATCTATTATGTTATATTTGCTGGATTTCTATTTTTCTTATTGTATTTATTTTTACCATATTTGTAATAGGAGTTTCTTTTATTTAAGAAACTCTTTTCCCTTCATAAGAATAACAAGAGATGAAAATACATATTTTAAGCAGTTTTTTTTAGGGAAACGATGGACGTGGCTGCTCGCCTTTCTCTTATTGAGAGTCACCCCTTTCGCCTTGGAAGGAGAGATGTGAGAGTCTGGAGGCCTAATCCTTTGGAAGGGTTTTCGTGTAAGTCTTTCTTCGAGTGTTTGGTTAATCCTTCTCCTTTGGATGAGTCTGTCTTTTCGTCGCTATGGAGGATTAAGGTTTCTAGAAAGGTGATATTCTTCACTTGGCAGGTTCTCCATGGCCGTATTAGTATGTTGGATAGGCTTGTTAGGATGGTGCCATCGTTGTTGGGCCTTTTTGTTGTATTCTTTGTCGAAAGACGAAGGAAGAATTGGACCATATTCTTTGGCATTGTGATTTTGCGAGCTTTGTCTAGGACTCTTTTTTCCAGATGTTTGGCATGATGTATGCTCACCACAAAGAGGTTAAAGACATGATCGAGGAAACCACAAAGAGGTTAAAGACATGATCGAGGAGTTCCTTATCAATTTGCTGTTTAGGGAGAGAGACCGTTTTCTTTGGCTTGCTAGTGTTTGTGCTATTGTTTGGGTGTTGTGGGGTGAGAGGAATAGTAGGGTGTTTAGGAGGGTTGAAAGGGAGCTAGAGATATATGGTCTCTTGTTCGTTTTCATGTGTCTCATTGGGCGTCGATTTCGAAGGTTTTTTTGTAAGTATTCTATGACATGATTTTGTATAGCTGGGGTCCTTTCTTGTAAAGGGAGACCCCTTTTTTATGGGTTTGGTTTTTGTATGCTTGTGTATTCTTTCATTTTTCCTCAATGAAAGTAGTTGTTCATATAAAAAAAAAAAAATGATAGGTTCTTTGAGAAAATCAGACATGAGCTATTATTATGCTGGAATTCTTCTTCTGAATCACCTGAGTTAGAATTCCAGCACTGTTTTTGGGAGTAAATTTGACTTTCTTGCCTACCAACAATTGTATTTTTTTTTGGGCAACCTCCTCGACCGATAATAGTCCATTCTTGCAAAATCTTGAAAAAAGCTTCGATCTCTTCTTTCTTTTCTAGAATTTAAAGGGTTCCCGCTAAGTAAATGTGTGTTGTTTGGCAACAAGCACAACTCATAAAATTCCCTCTTGCGATTGGCGCCATCAAGAGTTTTCTAGTCTTCCACCAGTGGCAGACAACATTGGCCCAGACGGCTGCTCTGATACCAAATTGATGTAGTCTAAAGAATAAAAAGGAGATAATACTCCAAGAATAAAATTAAAGTCTTTATTATGAATCAAAAGTTATCAAAACAAGAACATGATCGAGGATTTATAGAGAATTGGAAAGTAAACTGATCCTAATCCTAATTAATCAAAGAAACTAATTCTAAACCTAATAAACCAAGGAAACTAATCCTAATTCTAATCAATCAATGAATCTAATCCTAAACCTAATCAATCAAGGATTTGACCAAGATACCCTACTTTACCCTAATCCTACTACATCAAAATATTTATCATTTTTATACAAATTAGTTTGATGTATTTCACTCTCAAAATTTATTATTTTTGTCATATGTGTCCATTTAATATACTTAACACTTCGATATATGTCTACCAAATGTTGGACCTACTTTTTCCCTAAAAAAATGTTGGACCTTTAACTTTGTATAACTAGTGTTTGACCCATCTATTGCACTAGCAAGTACTTGATATGTGTTCAAAACATGTCGGAGTGTCCAAGTGTCTAACACATGTTGGACAAGGACACCCCTAGCCAAACTAAGAACAAGGATGGTGGAGTTTTTATTTATTTGTTTAAGAACAATGCGGTGGAGTTTGGAGCTTGTGCTCTCTTTTTTTCCCTTGTAGTAGCATTTTACCTGTTCAACCCTGTTTTCTATTTGTTTTTACTAATCTTGATGTCTATTTATCTAGGATTCGATTAGCCTGATGGAGACTGTTCATAACGTAAAGTATGTTAAAACTCTAGTGAGATTAAGCCATCTTCGCCCCTTACTATTTTCATTTTGTAGAATGTTGTATTTGTATAATCTTTATATTGTACTTTATGGTACATGTCCATAGGGAATTTTCGATTACCAATATGACTGGAAGCTACCGGAGAGTTTTTCAAAAACCAAAGGACTATGAGTGGTACCCTCTTTACGTTGTTTAAATTATTAATTTTTAGCATTTATCTATTCGTCAGAAGATTAAATTCTGTTGTTTGGCAGGGAATTGATCTCATATGTTGATCGTAATTTACCCCTGGCACAGAGTGATTTACAGAACCTTTTGAAGTCTCAAAGTGTTGAAATTAGCAAGGAAGACAAGATAGCCGATAAATCTAAAAATGAAGATTTATTGGATTCCACAGAACAATCAGGGTGCTGTAAAAAGAATGTTAAACTTGAAGCAGGTGAAAATGAAAATGAAAATGAAAATGGGCAAGGCACTCAGGATCCTCAGATGGCTCTCAAGTTGAGCTTTACTCTGCCCACGTCTTCTTATGCTACGATGGCAATTAGAGAATTGTTGAAAACATCAACTTCTGTGAGATCTATTTTGTCCCTTTTCATTACTAGCTAATAATTATTGTCTTATTCAAATGTAATTTTCAGTTAAAGTAAAATTATGCAAACTTTCCGCACAAACCTTTACTGTAGAGTACATGCAATCTGGGTGTCGTGTAACCTTTACTTTAGAAGTCATGGATTTATAGTTGGTTTGTTATTTCAGGTCGCTTTCCACAAAACTTTAAACTAATGATCAACTTCGCCAGTCATGGAGACAGCTGGGAATCCAGAGAAGTTCGGTAGGAATGGAAAGGTAAAACTTTTACCTTACTGCTATATCAGGAGTTACTCCACGTATTGGTTGAATGTGAGTGGGAAAATAATGAAGAATACAGAATGTGATTCTAAGTATCTCTGGTACATCACAAATGTTGCTGGTTGATTATGATTGTTTAGAGGATAATGGCTTCTTTTGTTCCAAATACAGTTGTCAAATGCAGTTGTCCTTCAAAAATAGGTGGGTGAGGCAATTTTAATCTTAAACTTTCAATTTCATCAATTTAAACCCTATGTCTGAATAAATATGGTTACTTTTGAAAGGAAGTTAATAGAATCAACAAGTAAATTGCAAAAAATTCAACTAACAAATTGAGCAGTTGGTGGGCCCGAGAGGTACTTCAAATCATTGGCCTATTATCCTTACCTCGGGGTGTAAGAGTTGGGGGCCTTGCCCCTTTCGTTTTGAGAACATGTGGCTTCAACATCCCTCTTTCAAATTCCAATTCCCTAGGTGGTGGAATGATCAGGTTCTTGGTAGATGGAAGGTTATCAGTTAATGGGTAAGTTGAGGGCTTTGCAAAAGAAGCTTGAGATCTAGAATAAAGAGGTTTTTGGTGATGTTAGGCCGAAAAAACAAGAGATTTTGGCTAAGATTGAGGGGTTGGATGATTTGGAGGTGAAGCGTCTTCTTGATGACCAGTGCAAGGCCGAAAGGGATTCCCTTAGCCTCCACTTTGCTGAGGTGGTTAGGAAGGTGACCTTCAGTTGGTGGCAAAAAGTCAAGGTGGCTTGGGCTAAGGAAGGAGACTGTAATACTTCTTTCTTCACAAAATGGCTAGTGGTCGGAAGAGTAGGAATAGGATTGGCCTTCTGGTCAAGGAGTCTGGGAAGGTCCTCAAGGAAGATAAGGAGGTGGAGGAAGAGATTATTTCCTTCTTTTCGAATCTCTATGGGCTAGAGGTCTACCCCAAACCTTTTGTCCATGGGATTGATTGGTGGCCGATTTCGGAGGGGGATAAGGAAAGTCTGACTATGCCTGTTTCTATGGTGTGTCAGTTTTTACGATACTTTGGAGGATTAAGATTCCTAGGAAGGTGAGGTTCTTTACATGGCAAGTTCTTCATGCCCGTGCTATCACTATGAATTGACTTGTGAGGAAGATGTCTTCGCTTGTTGGGCTTTTTTGTTGTATTCTTTGTCGGAAGGTGGAGGAAGGCTTGGATCATATTCTCTGGTGTTGTGATCTTGCGAAGATGTTTGGCATGATGTATGCTCGTCACAGTTATGTTATATGATCGAGGAGTTCCTCCTCGATCTACCTTTTGGAGAGAAGGGCCGTTTTTTATGGCTTGTGAGGGTGTGTGCGCTTTTACGGGTCTTGTGGGGGAGTAGAATAGAAGGGTGTTTAGAGGTTTGGAAAGAGGGATCCTTCAGAGATTTGGTCCCTTGTCTATTTTCATGTATGCTTATGGGCTTTGATTTCAAAGACCTTTTGTAACTACTCTATAGGCACTATTGTGCATAGTTGGAGTCTCTTTCTTTAAAGAGTCTTTCATTTTTTTCTCAATGAAAGTTGCTGATTTCATTTAAAAAAACTAACAAATTGAGCAAATAAAAAATCCTCAAACATAGCATTAGCAATAAAGTGTACAAATCCAACTAGCTAAAAACATCCGACATAAGTAGAGAAGCTAATCCTGGCAAAAAAATGGTCTTATTCAATTATAAGAATGACTATAGTTCTATCCATGGAAGCACAGATACAGATACGAGCACGGATACAACTTGGACACATCGACGCATCATTTTAAAAAATCTAAGACACAGACATGACAAGGACACAATTATTACATACATTTTTTAAAATATATATCATTTTTAAACAAGAACGAAATTTAAAGTCAATGAGCTTAGGCATCTATATTCCTAAAAAATTAGTTTGGTATACTTCGCTCTCAAACTTAATTAGTTTTGCCATATATATGTATCTATTTAGTATATGTAACAAGTGTTTGATACATGTCTACTAATCTTGGTTCTGTTTTGACTTTGTACAACTAGTGTCTAGTATATCGTACTAACAAGTGTTGGAGTGTACAAGTCTTTGATGTTGGATACGCTAGCCAAACTAAAGTAATTGTGCTTCATAGGTTCTACCAATCTTTATAAAAAAAAAAATCAGTACATCTTATGTGTAGTTTAGATAATCAATGATTTTCACACAATGATTGTGCAAATATGCACAATCAATCAGCAAGTGATATGTATTTTTATCGTTCTCCACCAGGATTAATTAAATAAATCTACTAACCTAAACTCATTTTTGGGTGAGTTCTTATGAGTAAACAATTTATAACTTTTGTATCTAAATTCTAATTGCAAGAATGAAAATAGGTGGAATTAGCCAGCAGTAAAGAATGAGGACTTGGGAATTTCTTAGAAAAGCGATTAAGACAGACCAGTAAGACCTAAAATAAGAAATAGGTTTTGATTGAGGGGTTGCTTGTATTTTACAATTGCTAAAACATAACTTTTGATCTCTCAACCACGCAAAATAAACATGGAATCCTCCCCGTCCCAGATTTCCTATAGCTGAAGTTTAATTTTTTTTAAACCCCATCCTAAATTAAGTTGTTGTAACATGCATTAGGTGAGTTGTTCTTTAGAACCACCTCACTTAACTAAGAACTAACTCTAATGCAGAGCTATTGTGGTATTGAGCAATCGGCTTTCTTTTATTTTTCCCAAAACAAAGAAACAGTACACAAATTAGTTGGCCAAACTTAACTCGTGCTTAACCATTCTAAAACACTCAAAATCCAGACAAAAGTGTGTTAGCAACTATATGAGTTCCACACAAGTGTCCTTAACCGTCACCTAAAAGAAATTGATTCATCAATTTGAACGTCTCTAATTCAAAACCGAACGTGAAACTTTAGTTTCATTCGGCTCCTTTATGAAAGATAGATAAAATGCAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAACAAGAAGAAAAAAAGCACCCACAACATCTATGTTAGCCTTTCCATTAGAACGCATTCATGACTCGTTTCATAAATGATCCCTATATAAGACGAGATTAGTTGGAAACTGCTTCAAGCAAATATACATTCAAGCAAATGTACACATTCTTACCTCTTTTTGTTTTTCCTGACAAACTAAACAATTTTTTTTTCTTGTAATATTCCTGAACTGAGAACACTTTTTAGACCTTGGATAGGGACAAACACATAATTGACTATTTTGGATAATAGAGAAGAAAAAACAAGCAAAAATTAGAAAAAAGAGGTGGACATAAGAGAACAGCAAGAAAAAAGAGGAAAAAGCACATATAGAAATTGTAGAAGCCTGAGATATCATTCTATTTGCTCAAGTAATAAGAGGTTTTTCGTTAGTAACTCGATCAATTCTTAGAAAATATATTGTCTTACCCTCATTGATAATAGCTAAAAGTCTTATCCGTATGTTATTATTTCAATTTTTTGAATGGTCCGAGGATTTTAAAAATTAATGGCTATTGAGAACAAATCAAATCAGGTGGTTATATTTCTCAATCTTTTTCACTTGCTCCTACCAAACTGAGGTCGAAAGGATTGAGAAAAATCAGTCATTCACAACGTCTGACGAAGGATTTCTCGAAAAGTTAAGGATTAGTAATCCTTTTTATAAATCAAATGGATTCGGAAAGAAACGGTTGTATTCAGCTACAAAGTATATTTTATACACTGCGAGAGGTTTCATTTTTTCGTTAATGGGAGTTCTAAGTATCGGTTTATATGGTTCTAATGAACCAACTTTAAATTTTGAAACATGAACTAATCACTCGTATCCTATAGCACTGGAATACCTATATCAGATTGTTATTGCTTTTGTTGTCAAATCACCAATTATACCCTTACATACATGGTTACCAGATACCCACGAAGAGACACATTACAACACTCGTATGCGTCTAGCTGGGTTGTCAGTTCTCCAGTTTTCTTTTCTTTTTTTTTTTTCTTCCCTCTTGTGTGCATGCGTGGGTGCACCCGTAGCCCTCAATATTCTCTTTTGAAGTTACATACATGACAAATGAACCAAGATTTTCATATGCAAATCTTGTGCCCACATGGCTCAATGTAGTTGCATCGAATATGTAGGCTTTTATTATTACCTATTTCTGGTGGTTACTTTCTTGAATAATTCTAACATTTGCTATAAACTTGCCCGTTTTGCTGTTTGCAGAGAGAGAACCTCGGGATAAGGGCACTTTGGAGAACTAACACAGAAATCCTTCTACTGAGACGATTTGCAGTTTCAGTTTCGACCAGTTCCATTTGAGGTTGGGCCATATCTAAGACAGTTAAGTTTCTACATTCACTTGTATGAAAATCCCATAAATGAATGTCTAAGGATGTACGGAAACGTTTTTAAATGTGCAAGGATTTGTATTGAATCGAATTAAACAAATTAAATCGATCATACAGTGATGATGATTCTGAGGTTCTTTCCCAACTCTGAGCATTGTATTCATTTGCTGGCAATTTTTAAGTGAATGAAAGGACCCTTTATTGTGCCT

mRNA sequence

ATGTGCAAGCTAGATCCTCCAACAGAAAGAAATAAGCTAGTGAAGACTGTAACTGCAGAAGATATCCTCACTGGAAACTTTACTATTAATGACGTTGTTCTTCCGTTGCCTGGGTCAAGAGTAATCTATCCCACAAATGATATTGCTGAAGTGTATAATGATTTAGCAACTAAGGATTCGATTAGCCTGATGGAGACTGTTCATAACGTAAAGGAATTTTCGATTACCAATATGACTGGAAGCTACCGGAGAGTTTTTCAAAAACCAAAGGACTATGAGTGGGAATTGATCTCATATGTTGATCGTAATTTACCCCTGGCACAGAGTGATTTACAGAACCTTTTGAAGTCTCAAAGTGTTGAAATTAGCAAGGAAGACAAGATAGCCGATAAATCTAAAAATGAAGATTTATTGGATTCCACAGAACAATCAGGGTGCTGTAAAAAGAATGTTAAACTTGAAGCAGGTGAAAATGAAAATGAAAATGAAAATGGGCAAGGCACTCAGGATCCTCAGATGGCTCTCAAGTTGAGCTTTACTCTGCCCACGTCTTCTTATGCTACGATGGCAATTAGAGAATTGTTGAAAACATCAACTTCTGTGAGATCTATTTTGTCCCTTTTCATTACTAGCTAATAATTATTGTCTTATTCAAATGTAATTTTCAGTTAAAGTAAAATTATGCAAACTTTCCGCACAAACCTTTACTGTAGAGTACATGCAATCTGGGTGTCGTGTAACCTTTACTTTAGAAGTCATGGATTTATAGTTGGTTTGTTATTTCAGGTCGCTTTCCACAAAACTTTAAACTAATGATCAACTTCGCCAGTCATGGAGACAGCTGGGAATCCAGAGAAGTTCGGTAGGAATGGAAAGAGAGAGAACCTCGGGATAAGGGCACTTTGGAGAACTAACACAGAAATCCTTCTACTGAGACGATTTGCAGTTTCAGTTTCGACCAGTTCCATTTGAGGTTGGGCCATATCTAAGACAGTTAAGTTTCTACATTCACTTGTATGAAAATCCCATAAATGAATGTCTAAGGATGTACGGAAACGTTTTTAAATGTGCAAGGATTTGTATTGAATCGAATTAAACAAATTAAATCGATCATACAGTGATGATGATTCTGAGGTTCTTTCCCAACTCTGAGCATTGTATTCATTTGCTGGCAATTTTTAAGTGAATGAAAGGACCCTTTATTGTGCCT

Coding sequence (CDS)

ATGTGCAAGCTAGATCCTCCAACAGAAAGAAATAAGCTAGTGAAGACTGTAACTGCAGAAGATATCCTCACTGGAAACTTTACTATTAATGACGTTGTTCTTCCGTTGCCTGGGTCAAGAGTAATCTATCCCACAAATGATATTGCTGAAGTGTATAATGATTTAGCAACTAAGGATTCGATTAGCCTGATGGAGACTGTTCATAACGTAAAGGAATTTTCGATTACCAATATGACTGGAAGCTACCGGAGAGTTTTTCAAAAACCAAAGGACTATGAGTGGGAATTGATCTCATATGTTGATCGTAATTTACCCCTGGCACAGAGTGATTTACAGAACCTTTTGAAGTCTCAAAGTGTTGAAATTAGCAAGGAAGACAAGATAGCCGATAAATCTAAAAATGAAGATTTATTGGATTCCACAGAACAATCAGGGTGCTGTAAAAAGAATGTTAAACTTGAAGCAGGTGAAAATGAAAATGAAAATGAAAATGGGCAAGGCACTCAGGATCCTCAGATGGCTCTCAAGTTGAGCTTTACTCTGCCCACGTCTTCTTATGCTACGATGGCAATTAGAGAATTGTTGAAAACATCAACTTCTGTGAGATCTATTTTGTCCCTTTTCATTACTAGCTAA

Protein sequence

MCKLDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDSISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVEISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFTLPTSSYATMAIRELLKTSTSVRSILSLFITS

Homology

[Close]

BLAST of Lsi06G008020 vs. Swiss-Prot
Match: PUS7_YEAST (Multisubstrate pseudouridine synthase 7 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUS7 PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.5e-16
Identity = 65/189 (34.39%), Postives = 98/189 (51.85%), Query Frame = 1


Query: 15  KTVTAEDILTGNFTINDVVLPLPGSRVIYPTND-IAEVYNDLATKDSISLMETVHNVKEF 74
           K VT EDI +  +T+ DVVLP PG  V+YP+N+ + ++Y D+   D++        V++F
Sbjct: 511 KAVTQEDIDSVKYTMEDVVLPSPGFDVLYPSNEELKQLYVDILKADNMDPFNMRRKVRDF 570

Query: 75  SITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVEISKEDKIADKSK 134
           S+    GSYR V QKPK  E+ +I Y D +  L  +DL                      
Sbjct: 571 SLA---GSYRTVIQKPKSLEYRIIHYDDPSQQLVNTDL---------------------- 630

Query: 135 NEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFTLPTSSYATMAIRE 194
             D+L++T      +K +K +  +    ++ G+ T     A+ L F L TS+YATMA+RE
Sbjct: 631 --DILNNTRAKESGQKYMKAKL-DRYMPDKGGEKT-----AVVLKFQLGTSAYATMALRE 666

Query: 195 LLKTSTSVR 203
           L+K  TS R
Sbjct: 691 LMKLETSRR 666

[Close]

BLAST of Lsi06G008020 vs. Swiss-Prot
Match: PUS7_BOVIN (Pseudouridylate synthase 7 homolog OS=Bos taurus GN=PUS7 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 9.3e-14
Identity = 44/151 (29.14%), Postives = 85/151 (56.29%), Query Frame = 1


Query: 7   PTERNKLVKTVTA---EDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDSISL 66
           P   + ++K  TA   E+    N++I+DVV+PLPG  VIYP + I+E Y ++ T D++ +
Sbjct: 497 PVPGDLVLKGATATFIEEDDVNNYSIHDVVMPLPGFDVIYPKHKISEAYREMLTADNLDI 556

Query: 67  METVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVEIS 126
               H ++++S   ++G+YR++  +P++  WE+++Y D  +PL  +D+ NL        +
Sbjct: 557 DNMRHKIRDYS---LSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGRPPPVFA 616

Query: 127 KEDKIADKSKNEDLLDSTEQSGCCKKNVKLE 155
            E K      +  L  ST  +   ++ +K++
Sbjct: 617 SEGKYRALKMDFSLPPSTYATMAIREVLKMD 644

[Close]

BLAST of Lsi06G008020 vs. Swiss-Prot
Match: PUS7_HUMAN (Pseudouridylate synthase 7 homolog OS=Homo sapiens GN=PUS7 PE=1 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 1.2e-13
Identity = 44/151 (29.14%), Postives = 84/151 (55.63%), Query Frame = 1


Query: 7   PTERNKLVKTVTA---EDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDSISL 66
           P   + ++K  TA   E+    N++I+DVV+PLPG  VIYP + I E Y ++ T D++ +
Sbjct: 499 PVPGDLVLKGATATYIEEDDVNNYSIHDVVMPLPGFDVIYPKHKIQEAYREMLTADNLDI 558

Query: 67  METVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVEIS 126
               H ++++S   ++G+YR++  +P++  WE+++Y D  +PL  +D+ NL        +
Sbjct: 559 DNMRHKIRDYS---LSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNLEGKTPPVFA 618

Query: 127 KEDKIADKSKNEDLLDSTEQSGCCKKNVKLE 155
            E K      +  L  ST  +   ++ +K++
Sbjct: 619 SEGKYRALKMDFSLPPSTYATMAIREVLKMD 646

[Close]

BLAST of Lsi06G008020 vs. Swiss-Prot
Match: YH2X_SCHPO (Putative pseudouridine synthase C1A4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1A4.09 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 9.0e-09
Identity = 33/106 (31.13%), Postives = 60/106 (56.60%), Query Frame = 1


Query: 20  EDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDSISLMETVHNVKEFSITNMT 79
           E+    NF+I D+VLPLPG  VIYP N+  ++Y  +  + S+  +      +E S   + 
Sbjct: 531 EEDEVNNFSIYDIVLPLPGRNVIYPKNETFDIYKSVMNEASLDPLNMSRKDRELS---LP 590

Query: 80  GSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVEISKE 126
           G YR++  +P++ E+  I Y +    L  +D ++ L+++S+ +S E
Sbjct: 591 GDYRKLLVRPENMEFNFIKYDNMEQQLILTD-KDRLENRSISVSSE 632

[Close]

BLAST of Lsi06G008020 vs. TrEMBL
Match: A0A0A0LYD2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690350 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 6.6e-59
Identity = 125/142 (88.03%), Postives = 132/142 (92.96%), Query Frame = 1


Query: 59  DSISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQ 118
           DSISL  +VHNVKEFSIT+MTGSYRRVFQ+PKDYEWELISYVDRNLPLAQSDL NLLKSQ
Sbjct: 15  DSISLTNSVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHNLLKSQ 74

Query: 119 SVEISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLS 178
           SVEISKE+KIADKSKNED LDST+QS CCKKN++LEAG    ENENGQGTQDPQMALKLS
Sbjct: 75  SVEISKEEKIADKSKNEDSLDSTDQSVCCKKNIQLEAG--GKENENGQGTQDPQMALKLS 134

Query: 179 FTLPTSSYATMAIRELLKTSTS 201
           FTLP SSYATMAIRELLKTSTS
Sbjct: 135 FTLPASSYATMAIRELLKTSTS 154

[Close]

BLAST of Lsi06G008020 vs. TrEMBL
Match: W9QVC1_9ROSA (Multisubstrate pseudouridine synthase 7 OS=Morus notabilis GN=L484_006163 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 2.4e-53
Identity = 121/206 (58.74%), Postives = 152/206 (73.79%), Query Frame = 1


Query: 7   PTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDSISLMET 66
           P ERN  VK V AEDIL GNF I+DVVLPLPGSRVI PTNDIA+VY+DLA KD+ISL E+
Sbjct: 540 PEERNNPVKVVAAEDILAGNFAIDDVVLPLPGSRVILPTNDIAQVYHDLAKKDAISLTES 599

Query: 67  VHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVEISKED 126
            HNVKEFSIT+MTGSYRRVFQKP DYEWEL++Y +  +PLA++DL  + KS+   +++E+
Sbjct: 600 AHNVKEFSITSMTGSYRRVFQKPVDYEWELLTYTNGTIPLAETDLDIIAKSKPAHVAEEN 659

Query: 127 KIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENEN----------GQGTQDPQMALK 186
           ++   + NE   +ST++S   +    L+  +N+ + E           G  +Q+PQMALK
Sbjct: 660 EV---NGNE---ESTKRSKRVENEAVLQTDDNKVDGEREAELQAESTCGTNSQEPQMALK 719

Query: 187 LSFTLPTSSYATMAIRELLKTSTSVR 203
           LSFTLP S YATMAIRELLKTSTSVR
Sbjct: 720 LSFTLPASCYATMAIRELLKTSTSVR 739

[Close]

BLAST of Lsi06G008020 vs. TrEMBL
Match: V4V316_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003382mg PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 9.2e-53
Identity = 120/213 (56.34%), Postives = 149/213 (69.95%), Query Frame = 1


Query: 5   DPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDSISLM 64
           D P  R+ LVKTVTAEDI +G +TI+DVVLPLPGSRVIYP ND+AEVY+ LA KD I+L 
Sbjct: 480 DHPDGRHNLVKTVTAEDINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLT 539

Query: 65  ETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVEISK 124
           E++HNVKEFSIT+MTG+YRRVFQKP D+EWEL++Y+D N PLA++DL  + K +   I K
Sbjct: 540 ESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKDKLANIVK 599

Query: 125 EDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENEN-----------ENENGQGTQDPQM 184
           E++    +K +D  D  +QS    K++KL    NE            E+  G  +Q  QM
Sbjct: 600 EEEAVCGNKKKDPSDCMKQSESLSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGKQM 659

Query: 185 ALKLSFTLPTSSYATMAIRELLKTSTSVRSILS 207
           ALKL  TLP+S YATMAIRELLKTSTSV    S
Sbjct: 660 ALKLGLTLPSSCYATMAIRELLKTSTSVSDFTS 692

[Close]

BLAST of Lsi06G008020 vs. TrEMBL
Match: A0A067DBE6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009530mg PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 1.2e-52
Identity = 119/208 (57.21%), Postives = 149/208 (71.63%), Query Frame = 1


Query: 5   DPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDSISLM 64
           D P  R+ LVKTVTA DI +G +TI+DVVLPLPGSRVIYP ND+AEVY+ LA KD I+L 
Sbjct: 318 DHPDGRHNLVKTVTAADINSGKYTIDDVVLPLPGSRVIYPMNDVAEVYHHLAEKDGINLT 377

Query: 65  ETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVEISK 124
           E++HNVKEFSIT+MTG+YRRVFQKP D+EWEL++Y+D N PLA++DL  + K++ V I K
Sbjct: 378 ESLHNVKEFSITSMTGNYRRVFQKPMDFEWELLTYIDGNKPLAETDLDKIAKAKLVNIVK 437

Query: 125 EDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENEN-----------ENENGQGTQDPQM 184
           E++    +K +D  D  +QS    K++KL    NE            E+  G  +Q  QM
Sbjct: 438 EEEAVCGNKEKDPSDCMKQSESLSKDIKLSTENNEAACAKEVKQPHVESVCGADSQGKQM 497

Query: 185 ALKLSFTLPTSSYATMAIRELLKTSTSV 202
           ALKL  TLP+S YATMAIRELLKTSTSV
Sbjct: 498 ALKLGLTLPSSCYATMAIRELLKTSTSV 525

[Close]

BLAST of Lsi06G008020 vs. TrEMBL
Match: U5GGM8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s05300g PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.6e-52
Identity = 114/199 (57.29%), Postives = 148/199 (74.37%), Query Frame = 1


Query: 10  RNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDSISLMETVHN 69
           +N LVK VT ED+ TGN+T++DVVLP+PGSRVI+PTN+IA+VY+DLA KD+I+L E+VH 
Sbjct: 546 KNTLVKVVTVEDMSTGNYTVDDVVLPMPGSRVIFPTNEIAKVYHDLAKKDAINLTESVHR 605

Query: 70  VKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVEISKEDKIA 129
           VKEFSIT+MTGSYRRVFQKP D+EWEL++Y D N PLA++DL  + K+ S  I K+++  
Sbjct: 606 VKEFSITSMTGSYRRVFQKPLDFEWELLTYNDSNKPLAETDLDKISKTGSTNIIKQEEQG 665

Query: 130 DKSKNEDLLDSTEQSGCCKKNVKLEAGEN-------ENENENGQGTQDPQMALKLSFTLP 189
              ++ DL D T+   C + ++ L +  N       E+E  +G   Q+ QMALKLS TLP
Sbjct: 666 KGDEDNDLSDCTKLPVCSRNSIALSSDTNEESEREVESEQVSGSNWQETQMALKLSLTLP 725

Query: 190 TSSYATMAIRELLKTSTSV 202
            S YATMAIRELLKTSTSV
Sbjct: 726 ASCYATMAIRELLKTSTSV 744

[Close]

BLAST of Lsi06G008020 vs. TAIR10
Match: AT3G04820.1 (AT3G04820.1 Pseudouridine synthase family protein)

HSP 1 Score: 199.9 bits (507), Expect = 1.6e-51
Identity = 109/200 (54.50%), Postives = 144/200 (72.00%), Query Frame = 1


Query: 4   LDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDSISL 63
           +D P ER+ LVK V+ ED+  G ++ +D+VLPLPGSRVIYP+NDIAE+Y+DLA KD ISL
Sbjct: 513 VDLPAERSDLVKVVSIEDLEAGTYSTSDIVLPLPGSRVIYPSNDIAEIYHDLAKKDGISL 572

Query: 64  METVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVE-I 123
            E++H VKEFSIT+MTG YRRVFQKP D+EWEL++Y D N PLA++DL  +  ++ VE +
Sbjct: 573 TESIHGVKEFSITSMTGGYRRVFQKPIDFEWELLTYTDSNKPLAETDLDRIPMNKPVEKV 632

Query: 124 SKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQ-GTQDPQMALKLSFTL 183
              ++I D+S   D    T      + N+K +   NE E + G   ++  QMALK++ TL
Sbjct: 633 GSTEEIEDESMKSD----TNPHDSGETNLKDQTDSNEAEKDTGNPDSEQTQMALKMALTL 692

Query: 184 PTSSYATMAIRELLKTSTSV 202
           P+S YATMAIRELLKTSTSV
Sbjct: 693 PSSCYATMAIRELLKTSTSV 708

[Close]

BLAST of Lsi06G008020 vs. NCBI nr
Match: gi|778664378|ref|XP_011660284.1| (PREDICTED: pseudouridylate synthase 7 homolog [Cucumis sativus])

HSP 1 Score: 333.2 bits (853), Expect = 3.3e-88
Identity = 174/201 (86.57%), Postives = 187/201 (93.03%), Query Frame = 1


Query: 1   MCKLDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDS 60
           +CKL  PTER+KLVK VTA D+L+GNFTI+DVVLPLPGSRV+YPTNDIAEVYNDLATKDS
Sbjct: 513 VCKLGLPTERHKLVKAVTAGDVLSGNFTIDDVVLPLPGSRVLYPTNDIAEVYNDLATKDS 572

Query: 61  ISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSV 120
           ISL  +VHNVKEFSIT+MTGSYRRVFQ+PKDYEWELISYVDRNLPLAQSDL NLLKSQSV
Sbjct: 573 ISLTNSVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHNLLKSQSV 632

Query: 121 EISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFT 180
           EISKE+KIADKSKNED LDST+QS CCKKN++LEAG    ENENGQGTQDPQMALKLSFT
Sbjct: 633 EISKEEKIADKSKNEDSLDSTDQSVCCKKNIQLEAG--GKENENGQGTQDPQMALKLSFT 692

Query: 181 LPTSSYATMAIRELLKTSTSV 202
           LP SSYATMAIRELLKTSTSV
Sbjct: 693 LPASSYATMAIRELLKTSTSV 711

[Close]

BLAST of Lsi06G008020 vs. NCBI nr
Match: gi|659125504|ref|XP_008462716.1| (PREDICTED: pseudouridylate synthase 7 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 324.3 bits (830), Expect = 1.6e-85
Identity = 171/201 (85.07%), Postives = 184/201 (91.54%), Query Frame = 1


Query: 1   MCKLDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDS 60
           MCKL  PTERNKLVK VTAED+L+GNFTI+DVVLPLPGSRV+YP NDIAEVYNDLATKDS
Sbjct: 513 MCKLGLPTERNKLVKAVTAEDVLSGNFTIDDVVLPLPGSRVLYPANDIAEVYNDLATKDS 572

Query: 61  ISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSV 120
           ISL E+VHNVKEFSIT+MTGSYRRVFQ+PKDYEWELISYVDRNLPLAQSDL  LLKSQSV
Sbjct: 573 ISLTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSV 632

Query: 121 EISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFT 180
           EISKE+KIA+KSK ED LDST+QS CCKK+++LEAG   NE E GQGT DPQMALKLSFT
Sbjct: 633 EISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAG--GNETEYGQGTPDPQMALKLSFT 692

Query: 181 LPTSSYATMAIRELLKTSTSV 202
           LP SSYATMAIRELLKTSTSV
Sbjct: 693 LPASSYATMAIRELLKTSTSV 711

[Close]

BLAST of Lsi06G008020 vs. NCBI nr
Match: gi|659125508|ref|XP_008462718.1| (PREDICTED: pseudouridylate synthase 7 homolog isoform X2 [Cucumis melo])

HSP 1 Score: 324.3 bits (830), Expect = 1.6e-85
Identity = 171/201 (85.07%), Postives = 184/201 (91.54%), Query Frame = 1


Query: 1   MCKLDPPTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDS 60
           MCKL  PTERNKLVK VTAED+L+GNFTI+DVVLPLPGSRV+YP NDIAEVYNDLATKDS
Sbjct: 483 MCKLGLPTERNKLVKAVTAEDVLSGNFTIDDVVLPLPGSRVLYPANDIAEVYNDLATKDS 542

Query: 61  ISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSV 120
           ISL E+VHNVKEFSIT+MTGSYRRVFQ+PKDYEWELISYVDRNLPLAQSDL  LLKSQSV
Sbjct: 543 ISLTESVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHKLLKSQSV 602

Query: 121 EISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLSFT 180
           EISKE+KIA+KSK ED LDST+QS CCKK+++LEAG   NE E GQGT DPQMALKLSFT
Sbjct: 603 EISKEEKIANKSKIEDSLDSTDQSVCCKKDIQLEAG--GNETEYGQGTPDPQMALKLSFT 662

Query: 181 LPTSSYATMAIRELLKTSTSV 202
           LP SSYATMAIRELLKTSTSV
Sbjct: 663 LPASSYATMAIRELLKTSTSV 681

[Close]

BLAST of Lsi06G008020 vs. NCBI nr
Match: gi|700211702|gb|KGN66798.1| (hypothetical protein Csa_1G690350 [Cucumis sativus])

HSP 1 Score: 235.3 bits (599), Expect = 9.5e-59
Identity = 125/142 (88.03%), Postives = 132/142 (92.96%), Query Frame = 1


Query: 59  DSISLMETVHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQ 118
           DSISL  +VHNVKEFSIT+MTGSYRRVFQ+PKDYEWELISYVDRNLPLAQSDL NLLKSQ
Sbjct: 15  DSISLTNSVHNVKEFSITSMTGSYRRVFQRPKDYEWELISYVDRNLPLAQSDLHNLLKSQ 74

Query: 119 SVEISKEDKIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENENGQGTQDPQMALKLS 178
           SVEISKE+KIADKSKNED LDST+QS CCKKN++LEAG    ENENGQGTQDPQMALKLS
Sbjct: 75  SVEISKEEKIADKSKNEDSLDSTDQSVCCKKNIQLEAG--GKENENGQGTQDPQMALKLS 134

Query: 179 FTLPTSSYATMAIRELLKTSTS 201
           FTLP SSYATMAIRELLKTSTS
Sbjct: 135 FTLPASSYATMAIRELLKTSTS 154

[Close]

BLAST of Lsi06G008020 vs. NCBI nr
Match: gi|703076110|ref|XP_010090257.1| (Multisubstrate pseudouridine synthase 7 [Morus notabilis])

HSP 1 Score: 216.9 bits (551), Expect = 3.5e-53
Identity = 121/206 (58.74%), Postives = 152/206 (73.79%), Query Frame = 1


Query: 7   PTERNKLVKTVTAEDILTGNFTINDVVLPLPGSRVIYPTNDIAEVYNDLATKDSISLMET 66
           P ERN  VK V AEDIL GNF I+DVVLPLPGSRVI PTNDIA+VY+DLA KD+ISL E+
Sbjct: 540 PEERNNPVKVVAAEDILAGNFAIDDVVLPLPGSRVILPTNDIAQVYHDLAKKDAISLTES 599

Query: 67  VHNVKEFSITNMTGSYRRVFQKPKDYEWELISYVDRNLPLAQSDLQNLLKSQSVEISKED 126
            HNVKEFSIT+MTGSYRRVFQKP DYEWEL++Y +  +PLA++DL  + KS+   +++E+
Sbjct: 600 AHNVKEFSITSMTGSYRRVFQKPVDYEWELLTYTNGTIPLAETDLDIIAKSKPAHVAEEN 659

Query: 127 KIADKSKNEDLLDSTEQSGCCKKNVKLEAGENENENEN----------GQGTQDPQMALK 186
           ++   + NE   +ST++S   +    L+  +N+ + E           G  +Q+PQMALK
Sbjct: 660 EV---NGNE---ESTKRSKRVENEAVLQTDDNKVDGEREAELQAESTCGTNSQEPQMALK 719

Query: 187 LSFTLPTSSYATMAIRELLKTSTSVR 203
           LSFTLP S YATMAIRELLKTSTSVR
Sbjct: 720 LSFTLPASCYATMAIRELLKTSTSVR 739

The following BLAST results are available for this feature:

BLAST of Lsi06G008020 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PUS7_YEAST	4.5e-16	34.39	Multisubstrate pseudouridine synthase 7 OS=Saccharomyces cerevisiae (strain ATCC...	[more]
PUS7_BOVIN	9.3e-14	29.14	Pseudouridylate synthase 7 homolog OS=Bos taurus GN=PUS7 PE=2 SV=1	[more]
PUS7_HUMAN	1.2e-13	29.14	Pseudouridylate synthase 7 homolog OS=Homo sapiens GN=PUS7 PE=1 SV=2	[more]
YH2X_SCHPO	9.0e-09	31.13	Putative pseudouridine synthase C1A4.09 OS=Schizosaccharomyces pombe (strain 972...	[more]

BLAST of Lsi06G008020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYD2_CUCSA	6.6e-59	88.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690350 PE=4 SV=1	[more]
W9QVC1_9ROSA	2.4e-53	58.74	Multisubstrate pseudouridine synthase 7 OS=Morus notabilis GN=L484_006163 PE=4 S...	[more]
V4V316_9ROSI	9.2e-53	56.34	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10003382mg PE=4 SV=1	[more]
A0A067DBE6_CITSI	1.2e-52	57.21	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009530mg PE=4 SV=1	[more]
U5GGM8_POPTR	1.6e-52	57.29	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s05300g PE=4 SV=1	[more]

BLAST of Lsi06G008020 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04820.1	1.6e-51	54.50	Pseudouridine synthase family protein	[more]

BLAST of Lsi06G008020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778664378\|ref\|XP_011660284.1\|	3.3e-88	86.57	PREDICTED: pseudouridylate synthase 7 homolog [Cucumis sativus]	[more]
gi\|659125504\|ref\|XP_008462716.1\|	1.6e-85	85.07	PREDICTED: pseudouridylate synthase 7 homolog isoform X1 [Cucumis melo]	[more]
gi\|659125508\|ref\|XP_008462718.1\|	1.6e-85	85.07	PREDICTED: pseudouridylate synthase 7 homolog isoform X2 [Cucumis melo]	[more]
gi\|700211702\|gb\|KGN66798.1\|	9.5e-59	88.03	hypothetical protein Csa_1G690350 [Cucumis sativus]	[more]
gi\|703076110\|ref\|XP_010090257.1\|	3.5e-53	58.74	Multisubstrate pseudouridine synthase 7 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009982	pseudouridine synthase activity
GO:0003723	RNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0009451	RNA modification
GO:0001522	pseudouridine synthesis

Vocabulary: **INTERPRO**
Term	Definition
IPR020103	PsdUridine_synth_cat_dom_sf
IPR001656	PsdUridine_synth_TruD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0009451	RNA modification
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G008020.1	Lsi06G008020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001656	Pseudouridine synthase, TruD	PANTHER	PTHR13326	TRNA PSEUDOURIDINE SYNTHASE D	coord: 7..133 score: 1.5E-51coord: 169..209 score: 1.5
IPR020103	Pseudouridine synthase, catalytic domain	unknown	SSF55120	Pseudouridine synthase	coord: 16..100 score: 7.91E-20coord: 174..197 score: 7.91
None	No IPR available	PANTHER	PTHR13326:SF8	SUBFAMILY NOT NAMED	coord: 7..133 score: 1.5E-51coord: 169..209 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G008020	Csa1G690320	Cucumber (Chinese Long) v2	culsiB058
Lsi06G008020	CSPI01G33650	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G008020	CsaV3_1G045610	Cucumber (Chinese Long) v3	cuclsiB068

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G008020	Cucumber (Gy14) v1	cgylsiB473
Lsi06G008020	Cucurbita maxima (Rimu)	cmalsiB078
Lsi06G008020	Cucurbita maxima (Rimu)	cmalsiB128
Lsi06G008020	Cucurbita moschata (Rifu)	cmolsiB064
Lsi06G008020	Cucurbita moschata (Rifu)	cmolsiB118
Lsi06G008020	Cucurbita pepo (Zucchini)	cpelsiB559
Lsi06G008020	Cucurbita pepo (Zucchini)	cpelsiB627
Lsi06G008020	Melon (DHL92) v3.5.1	lsimeB401
Lsi06G008020	Watermelon (Charleston Gray)	lsiwcgB377
Lsi06G008020	Watermelon (97103) v1	lsiwmB418
Lsi06G008020	Watermelon (97103) v1	lsiwmB419
Lsi06G008020	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G008020	Melon (DHL92) v3.6.1	lsimedB424
Lsi06G008020	Silver-seed gourd	carlsiB022
Lsi06G008020	Silver-seed gourd	carlsiB830
Lsi06G008020	Watermelon (97103) v2	lsiwmbB378
Lsi06G008020	Wax gourd	lsiwgoB521