Lsi06G007950 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G007950
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Plant self-incompatibility protein S1 family
Location	chr06 : 16590189 .. 16590632 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCATCTACAACACTTGCACTATCTTTGTTAATCTTATTTTTCGCTAGCCTACATGCCATTCAAGGAGCATTCTTAATCCCACCAGAAACTACAGTCACAATTATCAACCAAATTGAATATGGCATACCAGTCAACGTTCACTGCAAATCCAAGAACGATGACCTAGGAGTCCATACCCTTCCGCTTGGACAAAGCTACTCGTTCAAGTTCAGACCCAATCTCGTGGGGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACCGGTTCGATGTCTTCAACCACAAGAGAGATGCAGGGCTTTGCACCACATGCCAATGGATCATTCATGAATATAGCATATGCCTGCAAAACCCAAAAACTGCTGACAGCAAACAAATTTGCTACAACTACGGAGATAAGGAGCCAACAAGCATTATGTAA

mRNA sequence

ATGGCTTCATCTACAACACTTGCACTATCTTTGTTAATCTTATTTTTCGCTAGCCTACATGCCATTCAAGGAGCATTCTTAATCCCACCAGAAACTACAGTCACAATTATCAACCAAATTGAATATGGCATACCAGTCAACGTTCACTGCAAATCCAAGAACGATGACCTAGGAGTCCATACCCTTCCGCTTGGACAAAGCTACTCGTTCAAGTTCAGACCCAATCTCGTGGGGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACCGGTTCGATGTCTTCAACCACAAGAGAGATGCAGGGCTTTGCACCACATGCCAATGGATCATTCATGAATATAGCATATGCCTGCAAAACCCAAAAACTGCTGACAGCAAACAAATTTGCTACAACTACGGAGATAAGGAGCCAACAAGCATTATGTAA

Coding sequence (CDS)

ATGGCTTCATCTACAACACTTGCACTATCTTTGTTAATCTTATTTTTCGCTAGCCTACATGCCATTCAAGGAGCATTCTTAATCCCACCAGAAACTACAGTCACAATTATCAACCAAATTGAATATGGCATACCAGTCAACGTTCACTGCAAATCCAAGAACGATGACCTAGGAGTCCATACCCTTCCGCTTGGACAAAGCTACTCGTTCAAGTTCAGACCCAATCTCGTGGGGACGACGTTGTTTTACTGCAGCTTCGTATGGACTGGACAACACCAAATCTACCGGTTCGATGTCTTCAACCACAAGAGAGATGCAGGGCTTTGCACCACATGCCAATGGATCATTCATGAATATAGCATATGCCTGCAAAACCCAAAAACTGCTGACAGCAAACAAATTTGCTACAACTACGGAGATAAGGAGCCAACAAGCATTATGTAA

Protein sequence

MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYSICLQNPKTADSKQICYNYGDKEPTSIM

Homology

[Close]

BLAST of Lsi06G007950 vs. TrEMBL
Match: B0F817_CUCME (Self-incompatibility protein 1 OS=Cucumis melo PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.8e-24
Identity = 60/143 (41.96%), Postives = 88/143 (61.54%), Query Frame = 1


Query: 1   MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVH 60
           M SS  L  S+ +L   SLHA      + PETTVTI+N++  G  + +HC+SK DDLGV+
Sbjct: 1   MTSSLALGFSMFLLLPISLHATDELISLLPETTVTIVNEVG-GPLLGIHCRSKQDDLGVN 60

Query: 61  TLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYS 120
            +   +SYSF FRPN+ GTTLFYC F W  + Q + F +++ KRD   CT C+W+++   
Sbjct: 61  VVSSDKSYSFNFRPNVWGTTLFYCVFEWV-KGQPHYFTIYDFKRDGKTCTNCRWLVYASG 120

Query: 121 ICLQNPKTADSKQICYNYGDKEP 144
            CLQ+ +T+ +   C+ +    P
Sbjct: 121 PCLQHSETSIT---CFPWNKNAP 138

[Close]

BLAST of Lsi06G007950 vs. TrEMBL
Match: B0F818_CUCME (Self-incompatibility protein 2 OS=Cucumis melo PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.1e-23
Identity = 57/137 (41.61%), Postives = 85/137 (62.04%), Query Frame = 1


Query: 7   LALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQ 66
           L  S+ +L   SLHA      + PETTVTI+N++  G  + +HC+SK DDLGV+ +   +
Sbjct: 77  LGFSMFLLLPISLHATDELISLLPETTVTIVNEVG-GPLLGIHCRSKQDDLGVNVVSSDK 136

Query: 67  SYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYSICLQNP 126
           SYSF FRPN+ GTTLFYC F W  + Q + F +++ KRD   CT C+W+++    CLQ+ 
Sbjct: 137 SYSFNFRPNVWGTTLFYCVFEWV-KGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQHS 196

Query: 127 KTADSKQICYNYGDKEP 144
           +T+ +   C+ +    P
Sbjct: 197 ETSIT---CFPWNKNAP 208

[Close]

BLAST of Lsi06G007950 vs. TrEMBL
Match: G7LFK7_MEDTR (Leguminosin group486 secreted peptide OS=Medicago truncatula GN=MTR_8g078400 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.2e-21
Identity = 60/140 (42.86%), Postives = 80/140 (57.14%), Query Frame = 1


Query: 5   TTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYG-IPVNV--HCKSKNDDLGVHT 64
           TTL  SL+++   S  A +    +  + +VTIIN +    IP N+  HCKSKNDDLG HT
Sbjct: 7   TTLKFSLVLIVILSFEARETIASLFGKVSVTIINDMRQNHIPTNITFHCKSKNDDLGFHT 66

Query: 65  LPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYSI 124
           L  G SY+F FRP L G TLF+C F W G    Y FD+F+ +RD   C TC+W I ++  
Sbjct: 67  LTFGGSYTFSFRPQLFGATLFFCRFTWQGSLHPYYFDIFDFQRDD--CKTCKWKISKFGG 126

Query: 125 CLQNPKTADSKQICYNYGDK 142
           C    +T  S  +C  +  K
Sbjct: 127 CKYRTETM-SFDVCLPWNMK 143

[Close]

BLAST of Lsi06G007950 vs. TrEMBL
Match: V4S4P0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007065mg PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 2.5e-20
Identity = 53/123 (43.09%), Postives = 70/123 (56.91%), Query Frame = 1


Query: 7   LALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQ 66
           L + LL +  AS+ +  G   +PP  TV + N ++  + + VHCKSKNDDLG   LP   
Sbjct: 11  LLILLLHVLLASISSTSGWSAMPPRITVIVNNDLDNRLDLTVHCKSKNDDLGERHLPYHN 70

Query: 67  SYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLC-TTCQWIIHEYSICLQN 126
           S+ F FRPN  G T+F+CS  W  +H+IY FD++   RD  LC   C W I     CL N
Sbjct: 71  SFQFSFRPNFWGRTVFFCSMHWPPEHEIYWFDIYVTTRDRRLCKERCSWNIKPRGPCLFN 130

Query: 127 PKT 129
            KT
Sbjct: 131 DKT 133

[Close]

BLAST of Lsi06G007950 vs. TrEMBL
Match: A0A0A0LI28_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G162130 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.2e-20
Identity = 60/142 (42.25%), Postives = 84/142 (59.15%), Query Frame = 1


Query: 1   MASSTTLALSLLI-LFFASLHAIQGAFLIPPETTVTIINQI-EYGIPVNVHCKSKNDDLG 60
           M+S +T  LSL I L FA++  I+G     P  TV I N + +    + +HCKS +DDLG
Sbjct: 42  MSSFSTFGLSLFISLLFATIFTIEGKPFQSPPVTVNITNALKDVNNQLTIHCKSGDDDLG 101

Query: 61  VHTLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLC--TTCQWII 120
           VH L    SY+F FRPN  G+TLFYC+F WTG    + F+++   RD   C  T C WI+
Sbjct: 102 VHQLSHLASYAFNFRPNFWGSTLFYCAFDWTGSS--HYFNIYQDLRDRAKCNDTLCLWIV 161

Query: 121 HEYSICLQNPKTADSKQICYNY 139
            E  +C+ + KT ++  ICY +
Sbjct: 162 GEQGLCMFDYKT-NAYDICYTW 180

[Close]

BLAST of Lsi06G007950 vs. TAIR10
Match: AT1G04645.1 (AT1G04645.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 99.8 bits (247), Expect = 1.5e-21
Identity = 51/114 (44.74%), Postives = 68/114 (59.65%), Query Frame = 1


Query: 12  LILFFASLHAIQGAFLIPP---ETTVTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQSY 71
           ++ FF  L    G   +PP    T VT+ N I  G P+ +HCKSK DDLG+H +P  Q Y
Sbjct: 6   IVCFFFFLLFGSGYGGLPPFWRATVVTMTNLIG-GPPLTIHCKSKQDDLGIHVVPFKQEY 65

Query: 72  SFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYSIC 123
            FKF+PNL  +TLF+CSF W  Q +   FD+++ +RD G+C  CQW I     C
Sbjct: 66  HFKFQPNLWKSTLFFCSFQWDSQFK--SFDIYDAQRDQGICDDCQWEIKPDGPC 116

[Close]

BLAST of Lsi06G007950 vs. TAIR10
Match: AT3G16970.1 (AT3G16970.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 90.1 bits (222), Expect = 1.2e-18
Identity = 41/110 (37.27%), Postives = 63/110 (57.27%), Query Frame = 1


Query: 30  PETTVTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQSYSFKFRPNLVGTTLFYCSFVWT 89
           P TTV I N +   +P+  HCKSKNDDLG   + +  ++SF+FRP++ G TLF+C F+W 
Sbjct: 26  PRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGFIW- 85

Query: 90  GQHQIYRFDVFNHKRDAGL----CTTCQWIIHEYSICLQNPKTADSKQIC 136
              +++ FD++   RD       C  C+W I +   C  N K ++   +C
Sbjct: 86  -DKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLN-KNSNMFDVC 132

[Close]

BLAST of Lsi06G007950 vs. TAIR10
Match: AT5G12060.1 (AT5G12060.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 89.0 bits (219), Expect = 2.7e-18
Identity = 45/109 (41.28%), Postives = 66/109 (60.55%), Query Frame = 1


Query: 34  VTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQ 93
           V I N++  G+ +N+HCKS +DDLG+  L    S+SFKFR ++VGTTLFYC F W GQ +
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTWPGQSK 98

Query: 94  IYRFDVFNHKRDAG----LCTTCQWIIHEYSICLQNPKTADSKQICYNY 139
             RFD+++  RD       C  C W I     C+ + ++  +  ICY++
Sbjct: 99  --RFDIYDDDRDGVRSHISCINCIWDISIQGPCMFS-ESDHAFNICYDW 144

[Close]

BLAST of Lsi06G007950 vs. TAIR10
Match: AT3G17080.1 (AT3G17080.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 86.3 bits (212), Expect = 1.7e-17
Identity = 48/135 (35.56%), Postives = 69/135 (51.11%), Query Frame = 1


Query: 8   ALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQS 67
           +L   +LFF  +     A +    T+V I N +  G+P+  HCKS+ DDLG  +L  G+S
Sbjct: 3   SLETCLLFFVMV-MFMSAIMSRASTSVVIYNDLGGGLPLRHHCKSREDDLGYQSLAPGRS 62

Query: 68  YSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGL----CTTCQWIIHEYSICL 127
           +SF F P++ G TLFYC F W  +  I  FD++   RD       C  C+W I +   C 
Sbjct: 63  WSFGFTPDIFGRTLFYCRFSWGAESHI--FDIYKQSRDKEFQEFGCKKCEWKIRKNGPCK 122

Query: 128 QNPKTADSKQICYNY 139
              KT      CY++
Sbjct: 123 FYKKTGMFDH-CYSW 133

[Close]

BLAST of Lsi06G007950 vs. TAIR10
Match: AT5G12070.1 (AT5G12070.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 83.6 bits (205), Expect = 1.1e-16
Identity = 45/113 (39.82%), Postives = 69/113 (61.06%), Query Frame = 1


Query: 31  ETTVTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQSYSFKFRPNLV-GTTLFYCSFVWT 90
           ++ VTI N++  G  + +HCKS +DDLG+  L    S+SFKFRP++V G TLF+C F W 
Sbjct: 37  KSVVTITNRLGDGSTLKLHCKSADDDLGLKILAPNGSWSFKFRPSIVPGVTLFFCHFTWP 96

Query: 91  GQHQIYRFDVFNHKRDA---GL-CTTCQWIIHEYSICLQNPKTADSKQICYNY 139
           GQ +   F++++  RD    G+ C  C W I +Y  C +  +  D+  ICY++
Sbjct: 97  GQSK--WFNIYDDDRDGVRMGIPCIYCIWDIGKYGPC-RFSEIDDAFNICYDW 146

[Close]

BLAST of Lsi06G007950 vs. NCBI nr
Match: gi|659133839|ref|XP_008466918.1| (PREDICTED: uncharacterized protein LOC103504276 [Cucumis melo])

HSP 1 Score: 235.7 bits (600), Expect = 5.1e-59
Identity = 109/146 (74.66%), Postives = 121/146 (82.88%), Query Frame = 1


Query: 1   MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVH 60
           M SS TLALS LI F  +L AIQG+  I P TTV I+NQIEYGIPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPTLALSFLIFFLCNLRAIQGSIFIQPVTTVVIVNQIEYGIPVTVHCKSKNDDLGVH 60

Query: 61  TLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYS 120
            LPLGQ YSFKFRPNLVGTTLF+CSF WTGQHQIY F++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADSKQICYNYGDKEPTSI 147
           +CLQ+PK    K ICYNYGDKEP+ +
Sbjct: 121 MCLQDPKN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Lsi06G007950 vs. NCBI nr
Match: gi|659133879|ref|XP_008466934.1| (PREDICTED: uncharacterized protein LOC103504304 [Cucumis melo])

HSP 1 Score: 229.9 bits (585), Expect = 2.8e-57
Identity = 107/146 (73.29%), Postives = 120/146 (82.19%), Query Frame = 1


Query: 1   MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVH 60
           M SS  LALSLLI F  +L AIQG+  I P TTV I+NQIEY IPV VHCKSKNDDLGVH
Sbjct: 1   MGSSPRLALSLLIFFSCNLRAIQGSIFIQPVTTVVIVNQIEYDIPVTVHCKSKNDDLGVH 60

Query: 61  TLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYS 120
            LPLGQ YSFKFRPNLVGTTLF+CSF WTGQHQIY F++F+ KRDAG CTTC+WIIHEYS
Sbjct: 61  VLPLGQGYSFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDAGKCTTCRWIIHEYS 120

Query: 121 ICLQNPKTADSKQICYNYGDKEPTSI 147
           +CLQ+P+    K ICYNYGDKEP+ +
Sbjct: 121 MCLQDPEN-PGKDICYNYGDKEPSIV 145

[Close]

BLAST of Lsi06G007950 vs. NCBI nr
Match: gi|659094489|ref|XP_008448086.1| (PREDICTED: uncharacterized protein LOC103490374 [Cucumis melo])

HSP 1 Score: 203.8 bits (517), Expect = 2.1e-49
Identity = 90/126 (71.43%), Postives = 103/126 (81.75%), Query Frame = 1


Query: 21  AIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVHTLPLGQSYSFKFRPNLVGTT 80
           +I G+  I P TTV I+NQIEYGIPV  HCKSKN+DLGVH L LGQ YSFKFRPNLVGTT
Sbjct: 27  SISGSIFIQPVTTVVIVNQIEYGIPVTFHCKSKNNDLGVHVLSLGQGYSFKFRPNLVGTT 86

Query: 81  LFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYSICLQNPKTADSKQICYNYGD 140
           LF+CSF WTGQHQIY F++F+ K D G CTTC+WIIHEYS+CLQ+PK    K ICYNYGD
Sbjct: 87  LFFCSFTWTGQHQIYWFNIFDDKGDVGKCTTCRWIIHEYSMCLQDPKN-PGKVICYNYGD 146

Query: 141 KEPTSI 147
           KEP+ +
Sbjct: 147 KEPSIV 151

[Close]

BLAST of Lsi06G007950 vs. NCBI nr
Match: gi|659133742|ref|XP_008466882.1| (PREDICTED: uncharacterized protein LOC103504203, partial [Cucumis melo])

HSP 1 Score: 161.8 bits (408), Expect = 9.3e-37
Identity = 70/93 (75.27%), Postives = 78/93 (83.87%), Query Frame = 1


Query: 54  NDDLGVHTLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQ 113
           NDDLGVH LPLGQ Y FKFRPNLVGTTLF+CSF WTGQHQIY F++F+ KRD G CTTC+
Sbjct: 1   NDDLGVHVLPLGQGYLFKFRPNLVGTTLFFCSFTWTGQHQIYWFNIFDDKRDTGKCTTCR 60

Query: 114 WIIHEYSICLQNPKTADSKQICYNYGDKEPTSI 147
           WII EYS+CLQNPK    K ICYNYGDKEP+ +
Sbjct: 61  WIILEYSMCLQNPKN-PGKDICYNYGDKEPSIV 92

[Close]

BLAST of Lsi06G007950 vs. NCBI nr
Match: gi|659121590|ref|XP_008460735.1| (PREDICTED: uncharacterized protein LOC103499497 [Cucumis melo])

HSP 1 Score: 119.8 bits (299), Expect = 4.0e-24
Identity = 60/143 (41.96%), Postives = 88/143 (61.54%), Query Frame = 1


Query: 1   MASSTTLALSLLILFFASLHAIQGAFLIPPETTVTIINQIEYGIPVNVHCKSKNDDLGVH 60
           M SS  L  S+ +L   SLHA      + PETTVTI+N++  G  + +HC+SK DDLGV+
Sbjct: 1   MTSSLALGFSMFLLLPISLHATDELISLLPETTVTIVNEVG-GPLLGIHCRSKQDDLGVN 60

Query: 61  TLPLGQSYSFKFRPNLVGTTLFYCSFVWTGQHQIYRFDVFNHKRDAGLCTTCQWIIHEYS 120
            +   +SYSF FRPN+ GTTLFYC F W  + Q + F +++ KRD   CT C+W+++   
Sbjct: 61  VVSSDKSYSFNFRPNVWGTTLFYCVFEWV-KGQPHYFTIYDFKRDGKTCTNCRWLVYASG 120

Query: 121 ICLQNPKTADSKQICYNYGDKEP 144
            CLQ+ +T+ +   C+ +    P
Sbjct: 121 PCLQHSETSIT---CFPWNKNAP 138

The following BLAST results are available for this feature:

BLAST of Lsi06G007950 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi06G007950 vs. TrEMBL


Match Name	E-value	Identity	Description
B0F817_CUCME	2.8e-24	41.96	Self-incompatibility protein 1 OS=Cucumis melo PE=4 SV=1	[more]
B0F818_CUCME	4.1e-23	41.61	Self-incompatibility protein 2 OS=Cucumis melo PE=4 SV=1	[more]
G7LFK7_MEDTR	2.2e-21	42.86	Leguminosin group486 secreted peptide OS=Medicago truncatula GN=MTR_8g078400 PE=...	[more]
V4S4P0_9ROSI	2.5e-20	43.09	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007065mg PE=4 SV=1	[more]
A0A0A0LI28_CUCSA	3.2e-20	42.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G162130 PE=4 SV=1	[more]

BLAST of Lsi06G007950 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04645.1	1.5e-21	44.74	Plant self-incompatibility protein S1 family	[more]
AT3G16970.1	1.2e-18	37.27	Plant self-incompatibility protein S1 family	[more]
AT5G12060.1	2.7e-18	41.28	Plant self-incompatibility protein S1 family	[more]
AT3G17080.1	1.7e-17	35.56	Plant self-incompatibility protein S1 family	[more]
AT5G12070.1	1.1e-16	39.82	Plant self-incompatibility protein S1 family	[more]

BLAST of Lsi06G007950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659133839\|ref\|XP_008466918.1\|	5.1e-59	74.66	PREDICTED: uncharacterized protein LOC103504276 [Cucumis melo]	[more]
gi\|659133879\|ref\|XP_008466934.1\|	2.8e-57	73.29	PREDICTED: uncharacterized protein LOC103504304 [Cucumis melo]	[more]
gi\|659094489\|ref\|XP_008448086.1\|	2.1e-49	71.43	PREDICTED: uncharacterized protein LOC103490374 [Cucumis melo]	[more]
gi\|659133742\|ref\|XP_008466882.1\|	9.3e-37	75.27	PREDICTED: uncharacterized protein LOC103504203, partial [Cucumis melo]	[more]
gi\|659121590\|ref\|XP_008460735.1\|	4.0e-24	41.96	PREDICTED: uncharacterized protein LOC103499497 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010264	Self-incomp_S1
IPR008972	Cupredoxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G007950.1	Lsi06G007950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 30..88 score: 2.7
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 33..137 score: 1.4
None	No IPR available	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 1..144 score: 4.9
None	No IPR available	PANTHER	PTHR31232:SF5	GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATED	coord: 1..144 score: 4.9

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G007950	Melon (DHL92) v3.6.1	lsimedB424
Lsi06G007950	Silver-seed gourd	carlsiB022
Lsi06G007950	Silver-seed gourd	carlsiB830
Lsi06G007950	Cucumber (Chinese Long) v3	cuclsiB068
Lsi06G007950	Watermelon (97103) v2	lsiwmbB377
Lsi06G007950	Watermelon (97103) v2	lsiwmbB378
Lsi06G007950	Wax gourd	lsiwgoB521
Lsi06G007950	Cucumber (Gy14) v1	cgylsiB473
Lsi06G007950	Cucurbita maxima (Rimu)	cmalsiB078
Lsi06G007950	Cucurbita maxima (Rimu)	cmalsiB128
Lsi06G007950	Cucurbita moschata (Rifu)	cmolsiB064
Lsi06G007950	Cucurbita moschata (Rifu)	cmolsiB118
Lsi06G007950	Cucurbita pepo (Zucchini)	cpelsiB559
Lsi06G007950	Cucurbita pepo (Zucchini)	cpelsiB627
Lsi06G007950	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G007950	Cucumber (Chinese Long) v2	culsiB058
Lsi06G007950	Melon (DHL92) v3.5.1	lsimeB401
Lsi06G007950	Watermelon (Charleston Gray)	lsiwcgB376
Lsi06G007950	Watermelon (Charleston Gray)	lsiwcgB377
Lsi06G007950	Watermelon (97103) v1	lsiwmB417
Lsi06G007950	Watermelon (97103) v1	lsiwmB419
Lsi06G007950	Cucumber (Gy14) v2	cgyblsiB055