Lsi06G007940 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi06G007940
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat-containing protein
Locationchr06 : 16576448 .. 16589885 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTATCTTTTGGTCATTCGTTTTGATCAACTGCGACACTCGAGGGTCAGTATTCTTGACGATTGAATCAATGTAATTTCAAACATGTAAGGATTTGAAACTAGAACCTCAGTATGCAGTGACCGTGAAAAAATTGTTGAAAGGGTTCAATGTGTGCCTTCTCATATATGTTGATGGATAAACATATAACAAAAGAAATTTCTTCCAACGTATGAAAATTTTCAAGTTTTCTTTTGTCTTTACTCTTATGCTTCCAAATTAATATAATAATATGTATTTGAGAGCTATGTGTAGCTAAACTTTTAGTTTTAGGGTGTTTGATGTTTTAATTATGAATTTAAGTTAATGGTTTAGTGTTTTTCATGGATGTATTGAATGATATGTTTTTCAATACTATTGTGCTTTATTTTTCCTTGATTGATCATCAATGAATGTTAGGTTAGATGTGTGATTGAAGGGTTGTATGTATAATTGGATCTATAGTATTGAACATTTAATCGATTTTTCATGAAAATAGCTAGATTATTAAAGGAAGTTGTTGACGATTGTTCTTAATGCTATGTTTCTTCACTTGATTTCATGAAAATAGTAATCAATTAGGTTACATAAGAAAGGGTTGTCTTTGTGGGAAGATAATTCGGATAATAGTTTCTAGACTTAAACATATCGTTTACTTATAATTCCTTGGAAACCCTAAAACTTAACTTAATGAAGTAATTAATGATATCTACACCCTAGAACACTTTGATCTCTTAATTTTCACTTGCTTTTACTTTCTTAATGTGCTTTTCTCAAAACAAAACTCGAAGTTGATTCCTTAACTAAAGTCGACTCAATTCTTGAATAGCTTAGTATTTGAATCGTAACAAGGTCCTTAGTGGATCGATACTCAGACTTAACCGTTTTATATTATAACTTGACTCGTGCAGTTGCGAAAATCGCGCATCAAGTTTTTGACGCCGTTGTCGAGGACTAAGAAACGACTTATTTTGCTAAATATTTAAAGAATTGATAGATTTTAATTTAAGGTGTATTTTTACTTTTTTTTCTTTTCTTTAGATTGGTTGTAATTGCTTCCGGTGTATGCCTTGCTACAATACTAATCTTCTTTCTTTTGATCTCAAGATTGATAGAACTTACAGGAGAAATCTAAGAACTCAAGAAAATCCCACCAAAGAGATGGCGAAGGAAGCACCAAAGGCGATCCGAGATTACTTCCAACCAACGCTACCGGCGAATCAACTCGGACTTGCAAACGCCCCCATAAATGTCAACAACTTTGAACTCAAACCGAGGTTGATCCACATGCCTAGAGACCTTTTCTTTAGAGGACGTTCGACTGAGGACTCTTACAAGCATTTACGCTCTTTCTTAGAGATATGCGGAATGGTAAAGATTAACGGTGTTATTAGCGATGCTATTAAACTAACACTTTTTCCATTTTCTTTACAAGATCGAGCAAAGGAATGGTTAGAATCCATACCGCCGGAGAGCATAACTACTGGGATGCATTGGCCCAAGCATTTTTTAACAAATATTTTCCACCTGCTAAATCACAAAGATTGAGGACGGAGATTGGCACATTCCGTCAGCACGAAGATGAGCTCCTTTATGAGGCGTGGGAGAGGTACAAGAACCCCTTGAGAAGATGCCCTCAACATGGGTATTCAGATTGGTTGCAAATCCAATTATTCTACATCGGCCTATCAAGCAACACCAAATCTATTTTGGATTCTACTGCCGGAGGGTCTATATTCTCGAAAAACCGTCAATGAAGCATACACAATATTAGAGGACTTGGCCAATATATCATACAATTAGCCATGTGAAGGATCATCTTCAACCAAAATTGTCGGCATTCATGAGGTGGATGAGGTAAGCTCTTTAAAAGCTCAATTGGCTTATCTTACTAATGCTTTGTCTAAATTATCTCAAGGAGGCCAATCGCAAGCTAATCCACCATCCATAGCCTCTTTAGTAGCTATGGCCAATCAAACCGGATAAGGTGAGATGGAGATGGCCAACTATGTAGATCGAGGACAATTTAGAAGCCAACAACAATACCTCACTCACTACCATCCCAACTTGAAGAATCATGAAAAATTCTCATATGCAAACAACAAGAATGCGTTGCAAGCTCCTCAAGGTACAAAAACATCATCTCTAGAGGACGTAATGATTGATTTTGTCAAGGAATCAAGATCAAGCAGGACTACATTAGAGAATTCGGCGCAAACCATAGCAAGCATGGTGCAAGCTTAAGAGAAGGCACTTAAAAGCTTGGAGGTGCAAGTGAGTCAAGTTGCTACCTCCCTTCATACATTGTAGAAAGGTAAATTCCCAAGTTGCCCCGAGAAGAACCCTAAAAAGGAATGCAATGCAATTACTCTAAGAAGTGTTAAAGAATTGAACAAGCACATGGTGATCGAGGATGATGAACAACCTCAAGAGGAAGATGAGCATACACTTGCCAATGAGCCCATCAACGAGCAAGTAGCACCAAAAGAAAAGGAGGAAAGGGAAAAACAGGGAGTACTTCTAATTCTCTACTTTTTATTCCTAATACTCTTCCTTATCCTCCAAGGTTTCAAAAGAAAAAGATTGATGCTTTATTTTTTAAATTCTTAGACATTTTCAACAAGTTATAAATTAACATCCCTTTTGTAGAGGCATTAGAACAAATGCCTAAGTATGGAAAGTTTATGAAGGATGTCTTGTCTAAGAAACATAAATATGGAGATTATGAGATGGTGGTACTAACGGAGGAATGTAGTGCGGTGCTACAAAGAAAATTGCCTCAAAAGTTAAAGGATCTAGGGAGTTTTTCTATTCCTTGTCACTTAGGCAATAATTCGGTTACAAAAGTACTATGTGATTTAGGAGCTTCCATTAATTTCATGCCTTTGTCTATTTTCAGGAAGCTTGACGGAGGAGAGGTGCAACCAACCACTATATCTTTGCAAATGGCCGATAGATCGATTGTTCATCCATACGACATTGTGGAGGATGTGTTGGTTAAGGTAAACAAGTTCATCTTCCCGGCGACTTTGTAGTGCTTGATATGGAGGAAGATGCCAACATTTGCATAATGCTTGGGAGACCATTCTTGGCCACCGGATGAGCCCTCATCGATGTGCAAGATGAAAAACTAACTATTAGGCTAATGATGAGAAGGCAACATTTGACATTTACAAAACCCTTAAACATGCCGATGTGGTAAGTCTTGACTCATCTACACCAAGTAAGTCGGTAAATTCTTCTCCTCCTCCTAGCAATGTTTCTTCACATGTTGCCTCGTCTTTTGAACCTAATTATAAGATTAATAGCATGCCCAATTCTCTTGATAGTAATAGGAAGCATATTACTAGTTTTGATAATTTTCCTAACACTTGCATGCCCTTCAAACCTATGAATGAACAAGAGAAATTAATGGAGAAGTATGTTAAGGATTTTATGGAAAATCCGGTAATATCTCCTAAGGATGATTCTTTAAGATTGTTGGATTATGTTAGAAAAGGTGATGTTGAGATACTTGAAAATGACTTGATAACGGTCAAGATTTCTATGAATGATTATTGTTGTGAATGTCCTATGGGCGAAAACTTCAGGTTTCAGGGTGCTCGTTGAATGGAGTAACAAAACTACCTTGGGATCCAACATGATTTGTGAGCCCGGTCTAGCTAGACCTTAAATATATCGCTTCTTTGGAGGCAACCCAAGTTTATTGCTTTCTTTATTTTTAGCATTTTTTTCATTTGTTTGAATTTTGTGGGAGCCACTCATATGCCTTCAAAGTTTTTCAGGAATTTTTGTTGTGAAAAGTACTTAATTCGCCAATCCTGTTTGGTGGACTCCTGCTCATTCTCAGGCTTGTGTTTTCTTTTCTATCATGCATTGAGAACAATGCATAATTTTAAGTTTGGGGTGGGAGGCGTCTTTAGTACTTTTATTTGATTTTATCCTGCTATGCATGCTAAGTTGGTTTTAATGAATTCTTTATGCATGATAATGTGAATTGAAATTTTGAAAAAAAAATTTCAATTTCGATCTTTAAATAATGATGGGAATAGTTCATGTTTGTGTGTTTTGATGTTGATTGGCTATGATGAGATTCGAATATGCATGATGGACATTTATTGTGGAAATAGGATAGCATTATCTTGAGCTATGATCTATTTAAGTCCCTCTTTGAATTTCCCATATTTTGAGCATGTAGCTACTTTGATTTAGAAACTTTAACTTAGAAAATGATTAAGTTGAGTGTATTTGGTTGTCAGCTCGAAAGGCCCCACCAGTTAAAGAGTTGAAGTGCATGATAGTTTGTAATGTTAGACTAAGAGGAAAGAAAAGATTATTTTGCCTTTGAAAAGAAAAAAGTGTACACTTAAAGCATGAGTTTACTTGAATATCTCTTTACAAAAAATTTTTGATTAAACTTGTAACGTTTATGCATAGATGGGGGTGAAAAGAGTTGTCTTTGTTGTGATTAGTTAGGAAGACTGGGAATTAACTAGGTACGAGTCCCTACAGTGAATATGTGAAAGCTAGTGCCCCTAGGTAAAAGAATGCAAGTTTAAAAGAGCGCGTTGAAATTGATACTTAAGGCACCTCAGTGGACATATTACTTTCTTGAATTGTATGAATTCTTGATGATTGGTGCATGAGCTAGAGTAGGGGGAAAACTAGAGAAGCTCTCTTAAGTCCTACTTTGAGTTCTTGTTTTTTATTTAAGGGAGGCTTGCACGCACACACATGGGAGATGATTAGATTTGACCTTGAATGTTCACAATAATATAAAAATGTTTGAATATTTCTCCTTAAGTTCCAAATATGTTATTCTCTGAGGCATTAGTCAACAACATACTTATTTTGAATTCCCTATGGTTTAGTTTTATGTTTTCTCGGGACTAGCAAATCTCTAAGTTTGGGGTGGTGGAACACACCTAAATTGTGCGTTAATTACTCTTTATTTAGAAGTATTTTTGGTAGATTTGATATGTTTGCTAGTGGATTTCAGGTTGTAATAAAGAAAAATGGGTTTTGGAAGCAAAGGAATCAAACCGAGTTAAAACCGGAGAATAGAAGCTCAAAAACCTTAGAAAAACAGGTAACATAGAGCAAGAGCATCGCTACACTGCCTCTTTACGCTCAAGACTCGAGAGCCCTTATTTTTGCACACTCGAGAGCGTTGCGACGCTGGGGCAGCGTAGCGCTATGATGTGATAAAATTAGACCAGTGTCACGACGCTTTTCCGTAGCGTAGCGACGCTGGCTTTCCCTTTTCAATTAGGAGATTTTTTAGGAAATCTTTTCCTATATATTGGGGAGGTCTTTGGAAACCCTAAGGACGAAATAGCAGAGCCTCAAAGTGAGATTTTGACATTATAAAAGAGGAAATTGATCAGAGAAGAGTTGGAAGCCATTCGAGATCTCGAGGTGCCGACCGAGCGAAAATCGAAGGAGTTCAACGACAGGGAGCGATTTGAGAGATCTTCTTCCTAAGTTTTCTTTTCTCTTTACTCTTATGCTTCCAAATTCATATGATAATATGTATCTGAGTGTGACTAAACTCTTAGTTTTAGGGTGTTGGATGACTTAATTATGAATTTAAGTTATTGGTTTAGTGTTTTTCACGGATGTATTGAATGATATGTTTTTCAATACTATTGTGCTTTATTCTTCCTTGATTGATCCTCAACGAATGTTACGTTAGATGTGTGATTGAATGGTTGTATGTATAATTGGATCTATAATATTGAACCTTTAATCGATCTTTCATGATCACATTTATTGAGGCATTTTACAAACATTATTTGATTACGATTGAGGCTCCTTACTTTGCAATGTTTACTTTGCATTATCTTATTATCGTTACCTCTACCTTTACTATTTAGGATCAATCGATAAAGGTAAAGGTAACAGTAAGAGTGACTGATTCATAATTCTCCTACTGTAACACTAACAGTAAGTAACAGTAATGATAAAGGTAGTGGGTCCCACGTAATATTCAAACACAATCAGATTGAGCACCCTCTGTTCCTCAACCAGATTGGGCGTTTTAATTATAGATTAGGAGGCAAACCCCACAGTTCACTATGATTACGTAACATAGGTAAACAACAACAAACGTAATTAAATGAGACCCATTTTTCAGATTACTATTGATGGATTACGTTCCACCTAAGATAAACGTGATGTTAATCCAAAAAACAAGTAATAAAAAGCAGCAAGGTGGGTTTCAAACCTAGAATGTCCAAGGGGTAGACACTTTCAACCATTATTTTTCGTCTTCATAAGTATTATTATATGAATAAAGGAATTAAGAGGGGCTCAAGCCTTTGAGCCTTAATTAAATTGACTATGAACTCAATTGACATAAAATATCTATTAATAATCAAGAAATTTATGGTTCAAATCTTTATTCCTTATTTTACTAATATATAAAATTAAATTTTTTTTAAAAAATTGTCATAATCCTGAATCCTTAATGCACCGTTATTATTATTGTTAAATGAGAAATTTTGGACCAATCACAAATTGTCACATTATTTCTCATATTAACGGCAAAATAAGAAACAATTAAATTTGGGACTAATTAAAAGTTACATGTGTCCTAAATTCAAATTGAAGACGTAAATTGGCAAATCTCAATGGTGCCACACGTTTTCGTCTTCACTGTTGGATCAAATTAATTATTTTTGGTTCAATTAATTATTAACGTTTGAGCTAAAGTTCAATTAAGTCCAAAAATAAATTCAATTTGGCCTAAAGGCCAACAAATGCCCAAATCCAATTAGCTGGGCCCAAGGGTTAGGTCCATGGACCAGCCCAGCCCATACTCACCTGAGAACTCTATAAATAGAGGAGTTTTCCTTCATTTGAAAGGTTCAGAAAATTTACACTCCGTTTGTTTACTTTCTTGTGTAGCGAGGTGACTTCGGACAGCGTGGCGACTTCCGTTTGTTTACTTTCTTGTGAAAAAAAATTGTTTTGGTTTTCTTATTTTTTGTTGGTGAGAAAATTTGGTTTGAGTAACTAAGAAAAGTTATACTTCTTTTACAAATAAATGTTTATTGATTTTTGCTAGTTTTTAGAGTATTATTTATTATTTATTGAATTTTGTTGTTCTTTTTTGTTTTTTTCTTCTTCGGGAGATATTCGCTATAAGTTGGTTATTATCTTAGTTTTTAGATCTTTGATGTTTCTGATTTTGGTAGGGATTTTTAGGTAATTTTGGTGGGTTTAGACATGTTTTAGATAGTTTTTTTTTATCAACATTTCGCAATATCTCGCAATAACTTTCCAACTTCTAAACTTGAAATGCTCAACCCCAAGTCATTTTTATATGTGTTTTAGGTGATTTAGGGTGAGTTTGGATATCTTTTAGATAATTTTTTAGCTACCGTTTTTATATTTTTTTTATCTTGCAACGTCTCACAATATCTCGCAACAACTTTCCAACTTTCAAACTTGAAACACCCAAAACTAAATAATTTTTATATGTGTTTTAGGTGATTTAGGGTGGGTTTTTGCTATGTTTTAAATAGTTCTTTAGCTACTGTTTTTTATCTCGCAACAACTTTCCAACTTCCAAACTTACAACGCCCAAATTCAAATCATTTTTATATGTGTTTTAGGTAATTTAGGTAGATTTGGACATGTTTTAGATAGTTTTTTTAGCTACTGTTTTTTTATCTCACAATATCTAGCAATCATTTGAAAGTTGTTGCAAGATGTTGCGAGCTAAAAAATAGTAGCTAAAAAACTAGCAAAAAAATGTCCATACCCATTGTAATATTGCCTAAAACATCTATAAAAAGGAGCTCTAATTAAGTATTTCAAGTTTGAAAGTTGTTGCGAGATAAAAAATAGTAGCTAAAAAATTAGGAAAAAAATTTCACACTCACCCTAAATCACCTAAAACACCTATAAAAATGAGTTCAAATTGAGAGTTTTAAGTTTGGAGAATACCCGATGTATTGAAACTAATTCTGCAAGTGTCTTGAAATTATCTTACAAGAAATGAATTCTGAAAACATCTTACAAAAAGTATAAAATTGGTTTGGGGATAAGCATTTCAAGTTTGGAGGTTGCGAGATAGTTACGAGATGTTCACATGGTAAAAAACCGCACCTAAAAACATGTTAAAAAGATGTGTAAAACCACCCTAAATCACCTAAAAAACTATAAAATTGATTTGGGGTTAAACATTTCAAGTTTGGAAGTTGCGAGATAGTTGCAAGATGTTTGCGAGATGGTTGCAAGATAAAAAAACATTGCCTAAAAACATGCTAAAACATATCTAAAATCATTTTAAATCACCAAAAACACATATAAAATTGATTCGGGATGAGACATTTCAAGTTTGGAAGTAGCGAGATGGTTGCAAGATAAAAAACAGTAACTCGCAACAATTTTTAAACTTGTTTTTTAGTGAGATAAAAAACAGCGAGATTGTTGCAATATGTACATTTTTAGCTAGTTTTTTAGGTACTATGTTTTATCTTGCAACATCTCGCAACATCTTGTAACAATTTCCAAACTTGAAAGACTCAACTCTAACTCATTTTTATAGTTGTATTAGGTGATTTAGGGTAGGTATGAACATTTTGAGCTATTAAATATTAAATTAATGTGTTGGAATTAAGGTGGGTATAATATTAAATATTAAATTAATTTTGAGTGATTATCATTGATTTCTTCAAACAATATATAAATGAAACTGCGAGAAAAAATGAGCTAAATTTTTTCTGCGTTTTTTAGCCTTTCTTTAAAAGTGAGTTAGAGTTGAGCGTTTCAAGTTTGGAAGTTGTTGCGAGATGTTGCAAGATAAAAAAAAAAAAAAAAAAAAATATCAAGAAAATTAGCTAAAAAATGTTCATACTCATCATAAATCACCTAAAATACATATAAAAGTGAGGTAGAATTGAGTGTTTCGAGTTTGAAAATTGTTGCGAGATGTTGCAAGAAAAAAAAAAAAAAAAAAACTATCAAGAAAATTAGCTAAAAAATGTTCATACTCATCATAAATCACCTAAAATACATATAAAAGTGAGGTAGAATTGAGTGTTTCGAGTTTGAAAATTGTTGCGAGATGTTGCAAGAAAAAAAAAAAAAAAAAAACTATCAAGAAAATTAGCTAAAAAATGTTCATACTCATCATAAATCACCTAAAATACATATAAAAGTGAGGTAGAATTGAGTGTTTCGAGTTTGAAAATTGTTGCGAGATGTTGCAAGAAAAAAAAAAAAAAAAAAACTATCAAGAAAATTAGCTAAAAAATGTTCATACTCATCATAAATCACCTAAAATACATATAAAAGTGAGGTAGAATTGAGTGTTTCGAGTTTGAAAATTGTTGCGAGATGTTGCAAGAAAAAAAAAAAAAAAAAAACTATCAAGAAAATTAGCTAAAAAATGTTCATACTCATCATAAATCACCTAAAATACATATAAAAGTGAGGTAGAATTGAGTGTTTCGAGTTTGAAAATTGTTGCGAGATGTTGCAAGAAAAAAAAAAAAAAAAAAAACTATCAAGAAAATTAGCTAAAAAATGTTGTCATCCTAAATCACCTAAAATACATATAAAAGTGAGTTAAAATTGAGCGTATCAAGTTTGGAAGTTGTTGCGCGAGATGTTACGAGATGCTGCGAGATAAAAATAGTACCTAAAAAACTAGCTAAAAGATGTCCATATCTATCCTAAATCACCTAGAATACATATAAAAGTAAGTTAGAATTGAGTGTTTCCAGTTTCAAAGTTGTTGCGAGATGTTGTGAGAAAAAAGAGTACCTGAAAAATTAGCTAAAAAATATTCATATTCATCCTAAATCACCTAAAATACATATAAAAGTGATTTAGAATTGAGTGTTTCAAGTTTGGAAGTTGTTGCGAGATGCTGCAAGATGTTGCGAGATAAAAAAAAAAGTACCTAGAAAATTAGCTAAAAAATGTTCATACTCATCATAAATCACCTAAAATACATATAAAAGTGAGGTAGAATTGAGTGTTTCAAGTTTGAAAATTGTTGCGAGATGTTGCAAGATAAAAAATAATACCTAAAAAAGTAGCTAAAAAATGTTCATATCCATCCTAAATCACTTAGAATACATATAAAAGTGAGTTAGAATTGAGTGTTTTCAGTTTGGAAGTTGTTGCGAGATGCTACGAGATGTTGCTAGATAAAAAAAAATACCTAAAAAATTATCTAAAGAATATTCATACTCATCCTAAATCAATGTTGACACATATAAAAATGAGTTAGAGTTGAGCGTTTCAAGTTTGGAAGTTACGAGATGTTGCGAGATACAAAAAAATACCTAGAAATTAGCTAAGAAATATTCATACTCATACTAAATCACCTAAAATACATATAAAAGTGAGTTAGAATTGAACATTTCAAGTTTGAAAGTTGTTGCGAGATGTTGCAAGATAAAATACAGTACCTAGAAAATTAGCTAAAAAATGTTCATACTCATTCTACATCACATAAAACACATAAAAGTGAGTTAGAATTGAGTGTTTCAAGTTTGGAAGTTGTTGGGAGATGCTGCTAGATGTTGTGAGAGATAAAAAAAAATAAAAATAAAAAATAAAAAATAAAAAAAAATAAAAAACTAGTTAAAGAAATGTCTACACCCATCCTAAAACACCTAAAAGATCTATAAAGAGAGAAAAACTAAATTGTACAAATAAGAAAAAAAAATTAAACTAACTCAACTCATAAAAAAATCTATAACAATAAAAATAATCATAAAAAAAAATATACTACAAAGAAAATGAGATTGAGAGAATGTTGAAGTTGTTAATAATGTTGGAGCATGAAAAGAGAGTTTGGGAGAATAGAAATTAGAAAGAAGTTATAGAGAAATTAGAGAAAATAGGAGAGAGAATGAAGAAAGTCACTAAATGTGTGTTATTTAATAACAAAAAGTTCTTTCCTCACTCAAAGATATAGGGGACATTTCACATCTCATTTGTCCCATAACTCTTTCTTTTTAAAACGTAATCCCAAAACTCTTTAAACCCCTTAAAAATGTACTACAATTTCACCATAATTATTTTATCTTATTTCGTTCATTCAATCAATAGAGATATTTTAGTGAGGAGGTGAGATGTAAAGCCAAGGGCCGTAAATGAATCAACTAATTCTCTCATCCCCTTCTTTCTCAGGCTCCGGCCATTCCCATTTGAATCTCCAACACACCCAACAAATCCATGCCCATTTCATCAAAACACAATTCCATAAACCTCACCCTTTCTTCTCTCAATCCCACTTCACCCCGGAAGCCAATTACAATCTCCTCATTTCATCTTACACCAACAACCAACTCCCACAAGCTTCTTTCAGATTGTACCTCCATATGCGAACGACTGATCCTGCTGCTGCACTTGACAACTTCATTTTGCCTTCACTTCTCAAAGCCTGTGCTCAGGCTTCCTGTGGGGTTTGGGGCAGGGAACTCCATGGTTTCGCCGTTAAGAACGGGTTTGCCACAGATGTTTTTGTGTGCAACGCTTTGATGAACATGTATGAGAAATGTGGGAGCTTGGTTTCTGCTCGCTTGGTGTTTGACAAAATGCCCGAGAGAGATGTTGTCTCTTGGAGTACTATGCTCGGGTGCTATGTGCGAAGCAAATCTTTCGGTGAAGCGCTTCGACTCGTAGGAGAGATGCATTTTGTGGGAGTGAAGCTTAGTGGTGTTGCTTTGATTAGCGTGATTGGTGTATTTGGAGAACTCTTGGATATGAAGTCGGGGAGGGCGGTTCATGGTTACATTGTGAGAAATGTTGGTGATGTGAAGATGGAAGTTCCTTTGACAACTGCGTTGATCAATATGTATTGCAAGGGTGAGTGTTTGGAATCAGCACAGAGGCTTTTTGACAGTTTATCTCAGAGAAGTGTTGTTTCTTGGACGTCAATGATAGCAGGTTGTATTCACAATTGCAGATTAGTTGAAGGGGCAAAGAACTTTAATAGAATGCTTGAAGAAAAAATATTTCCTAATGAGATTACATTGCTCAGTTTGATTACAGCATGTGGTTTTGTGAGAACCTTGGATTTGGGCAAATGTTTGCATGCGTATCTGTTAAGAAATGGGTTTGGTATGTCTCTGGCTTTGGCCACTGCTCTCATAGACATGTATGGAAAATGTGGGCAAGTTGGATATGCCAGAGCTCTTTTCAATGGTGTTGAGGAAAAAGATGTCAAGATTTGGAGTGCTATGATATCCACTTATGCATACGTGAGTTGCATCGATCAAGCTTTTGGCCTCTTCCTTGAGATGTTAGACAATGAAGTGAAACCAAACAAGGTGACAATGGTTAGCCTTCTTTCTTCATGTGCAGAAGTTGGAGCCCTTGACCTTGGCAAGTGGACTCATGCTTACATACGTCGTCACGACCTTGAAGTAGACGTCATTCTAGAAACAGCTCTCATCAACATGTATGCCAAATGTGGAGATCTAACAATTGCTCGTAGCCTGTTCGATGAAGCCACACGACGGGATATTCACATGTGGAATGCAATGATGGCTGGATTCTCGATGCATGGTTGTGGAACAGAAGCTTTGGAACTCTTTTCAGAGATGGAGAGCCATGGTGTTAAACCTAATGATATCACATTCATTTCTATTTTTCACGCTTGCAGTCATTCGGGATTGGTAGCAGATGGGAAAAAGCATTTCAACAGAATGGTTCACGACTTTGGAATTGTTCCAAAGATTGAGCACTATGGATGCTTGGTGGATCTTCTCGGTCGAGCTGGACGTCTTGACGAAGCTCACGACATCATTGAAAACATGCCCATGAGGCCTAACACAATTACATGGGGTGCTCTGCTTGCTGCATGTAAACTACACAAGAATCTGGCCTTGGGGGAGGTGGCTGCAAGAAAGATTCTTGAATTGGACCCACAAAATTGTGGGTATAGTGTTCTTAAGTCAAACATCTATGCATCAGCAAAGCGATGGAATGATGTAACAAGCGTTAGAGAAACAATGAACCATTTAGGGATGAAGAAAGAACCAGGACTCAGCTGGATAGAAGTAAATGGTTCAATCCACCACTTCAAATCTGGGGATAAAACATGCACACAAACAACAGAAGTATATGAAATGGTGACTGAAATGTGCATCAAGTTGAGAGAGGCAGGATACACTCCAAACACATCAGCAGTTTTGTTAAATGTAGAAGAGGAAGAGAAGGAATTTGCACTCAGTTACCATAGTGAGAAACTGGCCATGGCATTTGGACTCATAAGCATGGCCCCTGGTACACCCATCCGAATCGTTAAGAATCTGAGGATTTGCGATGATTGTCATGCTGCAACAAAGCTATTATCAAAGATCTATGGACGGACAATAATAGTTAGAGATCGAAACCGATTTCACCACTTCAGTGAAGGATATTGTTCTTGTCTGGGTTATTGGTAA

mRNA sequence

ATGGGCTCCGGCCATTCCCATTTGAATCTCCAACACACCCAACAAATCCATGCCCATTTCATCAAAACACAATTCCATAAACCTCACCCTTTCTTCTCTCAATCCCACTTCACCCCGGAAGCCAATTACAATCTCCTCATTTCATCTTACACCAACAACCAACTCCCACAAGCTTCTTTCAGATTGTACCTCCATATGCGAACGACTGATCCTGCTGCTGCACTTGACAACTTCATTTTGCCTTCACTTCTCAAAGCCTGTGCTCAGGCTTCCTGTGGGGTTTGGGGCAGGGAACTCCATGGTTTCGCCGTTAAGAACGGGTTTGCCACAGATGTTTTTGTGTGCAACGCTTTGATGAACATGTATGAGAAATGTGGGAGCTTGGTTTCTGCTCGCTTGGTGTTTGACAAAATGCCCGAGAGAGATGTTGTCTCTTGGAGTACTATGCTCGGGTGCTATGTGCGAAGCAAATCTTTCGGTGAAGCGCTTCGACTCGTAGGAGAGATGCATTTTGTGGGAGTGAAGCTTAGTGGTGTTGCTTTGATTAGCGTGATTGGTGTATTTGGAGAACTCTTGGATATGAAGTCGGGGAGGGCGGTTCATGGTTACATTGTGAGAAATGTTGGTGATGTGAAGATGGAAGTTCCTTTGACAACTGCGTTGATCAATATGTATTGCAAGGGTGAGTGTTTGGAATCAGCACAGAGGCTTTTTGACAGTTTATCTCAGAGAAGTGTTGTTTCTTGGACGTCAATGATAGCAGGTTGTATTCACAATTGCAGATTAGTTGAAGGGGCAAAGAACTTTAATAGAATGCTTGAAGAAAAAATATTTCCTAATGAGATTACATTGCTCAGTTTGATTACAGCATGTGGTTTTGTGAGAACCTTGGATTTGGGCAAATGTTTGCATGCGTATCTGTTAAGAAATGGGTTTGGTATGTCTCTGGCTTTGGCCACTGCTCTCATAGACATGTATGGAAAATGTGGGCAAGTTGGATATGCCAGAGCTCTTTTCAATGGTGTTGAGGAAAAAGATGTCAAGATTTGGAGTGCTATGATATCCACTTATGCATACGTGAGTTGCATCGATCAAGCTTTTGGCCTCTTCCTTGAGATGTTAGACAATGAAGTGAAACCAAACAAGGTGACAATGGTTAGCCTTCTTTCTTCATGTGCAGAAGTTGGAGCCCTTGACCTTGGCAAGTGGACTCATGCTTACATACGTCGTCACGACCTTGAAGTAGACGTCATTCTAGAAACAGCTCTCATCAACATGTATGCCAAATGTGGAGATCTAACAATTGCTCGTAGCCTGTTCGATGAAGCCACACGACGGGATATTCACATGTGGAATGCAATGATGGCTGGATTCTCGATGCATGGTTGTGGAACAGAAGCTTTGGAACTCTTTTCAGAGATGGAGAGCCATGGTGTTAAACCTAATGATATCACATTCATTTCTATTTTTCACGCTTGCAGTCATTCGGGATTGGTAGCAGATGGGAAAAAGCATTTCAACAGAATGGTTCACGACTTTGGAATTGTTCCAAAGATTGAGCACTATGGATGCTTGGTGGATCTTCTCGGTCGAGCTGGACGTCTTGACGAAGCTCACGACATCATTGAAAACATGCCCATGAGGCCTAACACAATTACATGGGGTGCTCTGCTTGCTGCATGTAAACTACACAAGAATCTGGCCTTGGGGGAGGTGGCTGCAAGAAAGATTCTTGAATTGGACCCACAAAATTGTGGGTATAGTGTTCTTAAGTCAAACATCTATGCATCAGCAAAGCGATGGAATGATGTAACAAGCGTTAGAGAAACAATGAACCATTTAGGGATGAAGAAAGAACCAGGACTCAGCTGGATAGAAGTAAATGGTTCAATCCACCACTTCAAATCTGGGGATAAAACATGCACACAAACAACAGAAGTATATGAAATGGTGACTGAAATGTGCATCAAGTTGAGAGAGGCAGGATACACTCCAAACACATCAGCAGTTTTGTTAAATGTAGAAGAGGAAGAGAAGGAATTTGCACTCAGTTACCATAGTGAGAAACTGGCCATGGCATTTGGACTCATAAGCATGGCCCCTGGTACACCCATCCGAATCGTTAAGAATCTGAGGATTTGCGATGATTGTCATGCTGCAACAAAGCTATTATCAAAGATCTATGGACGGACAATAATAGTTAGAGATCGAAACCGATTTCACCACTTCAGTGAAGGATATTGTTCTTGTCTGGGTTATTGGTAA

Coding sequence (CDS)

ATGGGCTCCGGCCATTCCCATTTGAATCTCCAACACACCCAACAAATCCATGCCCATTTCATCAAAACACAATTCCATAAACCTCACCCTTTCTTCTCTCAATCCCACTTCACCCCGGAAGCCAATTACAATCTCCTCATTTCATCTTACACCAACAACCAACTCCCACAAGCTTCTTTCAGATTGTACCTCCATATGCGAACGACTGATCCTGCTGCTGCACTTGACAACTTCATTTTGCCTTCACTTCTCAAAGCCTGTGCTCAGGCTTCCTGTGGGGTTTGGGGCAGGGAACTCCATGGTTTCGCCGTTAAGAACGGGTTTGCCACAGATGTTTTTGTGTGCAACGCTTTGATGAACATGTATGAGAAATGTGGGAGCTTGGTTTCTGCTCGCTTGGTGTTTGACAAAATGCCCGAGAGAGATGTTGTCTCTTGGAGTACTATGCTCGGGTGCTATGTGCGAAGCAAATCTTTCGGTGAAGCGCTTCGACTCGTAGGAGAGATGCATTTTGTGGGAGTGAAGCTTAGTGGTGTTGCTTTGATTAGCGTGATTGGTGTATTTGGAGAACTCTTGGATATGAAGTCGGGGAGGGCGGTTCATGGTTACATTGTGAGAAATGTTGGTGATGTGAAGATGGAAGTTCCTTTGACAACTGCGTTGATCAATATGTATTGCAAGGGTGAGTGTTTGGAATCAGCACAGAGGCTTTTTGACAGTTTATCTCAGAGAAGTGTTGTTTCTTGGACGTCAATGATAGCAGGTTGTATTCACAATTGCAGATTAGTTGAAGGGGCAAAGAACTTTAATAGAATGCTTGAAGAAAAAATATTTCCTAATGAGATTACATTGCTCAGTTTGATTACAGCATGTGGTTTTGTGAGAACCTTGGATTTGGGCAAATGTTTGCATGCGTATCTGTTAAGAAATGGGTTTGGTATGTCTCTGGCTTTGGCCACTGCTCTCATAGACATGTATGGAAAATGTGGGCAAGTTGGATATGCCAGAGCTCTTTTCAATGGTGTTGAGGAAAAAGATGTCAAGATTTGGAGTGCTATGATATCCACTTATGCATACGTGAGTTGCATCGATCAAGCTTTTGGCCTCTTCCTTGAGATGTTAGACAATGAAGTGAAACCAAACAAGGTGACAATGGTTAGCCTTCTTTCTTCATGTGCAGAAGTTGGAGCCCTTGACCTTGGCAAGTGGACTCATGCTTACATACGTCGTCACGACCTTGAAGTAGACGTCATTCTAGAAACAGCTCTCATCAACATGTATGCCAAATGTGGAGATCTAACAATTGCTCGTAGCCTGTTCGATGAAGCCACACGACGGGATATTCACATGTGGAATGCAATGATGGCTGGATTCTCGATGCATGGTTGTGGAACAGAAGCTTTGGAACTCTTTTCAGAGATGGAGAGCCATGGTGTTAAACCTAATGATATCACATTCATTTCTATTTTTCACGCTTGCAGTCATTCGGGATTGGTAGCAGATGGGAAAAAGCATTTCAACAGAATGGTTCACGACTTTGGAATTGTTCCAAAGATTGAGCACTATGGATGCTTGGTGGATCTTCTCGGTCGAGCTGGACGTCTTGACGAAGCTCACGACATCATTGAAAACATGCCCATGAGGCCTAACACAATTACATGGGGTGCTCTGCTTGCTGCATGTAAACTACACAAGAATCTGGCCTTGGGGGAGGTGGCTGCAAGAAAGATTCTTGAATTGGACCCACAAAATTGTGGGTATAGTGTTCTTAAGTCAAACATCTATGCATCAGCAAAGCGATGGAATGATGTAACAAGCGTTAGAGAAACAATGAACCATTTAGGGATGAAGAAAGAACCAGGACTCAGCTGGATAGAAGTAAATGGTTCAATCCACCACTTCAAATCTGGGGATAAAACATGCACACAAACAACAGAAGTATATGAAATGGTGACTGAAATGTGCATCAAGTTGAGAGAGGCAGGATACACTCCAAACACATCAGCAGTTTTGTTAAATGTAGAAGAGGAAGAGAAGGAATTTGCACTCAGTTACCATAGTGAGAAACTGGCCATGGCATTTGGACTCATAAGCATGGCCCCTGGTACACCCATCCGAATCGTTAAGAATCTGAGGATTTGCGATGATTGTCATGCTGCAACAAAGCTATTATCAAAGATCTATGGACGGACAATAATAGTTAGAGATCGAAACCGATTTCACCACTTCAGTGAAGGATATTGTTCTTGTCTGGGTTATTGGTAA

Protein sequence

MGSGHSHLNLQHTQQIHAHFIKTQFHKPHPFFSQSHFTPEANYNLLISSYTNNQLPQASFRLYLHMRTTDPAAALDNFILPSLLKACAQASCGVWGRELHGFAVKNGFATDVFVCNALMNMYEKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEALRLVGEMHFVGVKLSGVALISVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTALINMYCKGECLESAQRLFDSLSQRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNEITLLSLITACGFVRTLDLGKCLHAYLLRNGFGMSLALATALIDMYGKCGQVGYARALFNGVEEKDVKIWSAMISTYAYVSCIDQAFGLFLEMLDNEVKPNKVTMVSLLSSCAEVGALDLGKWTHAYIRRHDLEVDVILETALINMYAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSMHGCGTEALELFSEMESHGVKPNDITFISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIEHYGCLVDLLGRAGRLDEAHDIIENMPMRPNTITWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTCTQTTEVYEMVTEMCIKLREAGYTPNTSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW
BLAST of Lsi06G007940 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 1.9e-157
Identity = 283/712 (39.75%), Postives = 425/712 (59.69%), Query Frame = 1

Query: 43  YNLLISSYTNNQLPQASFRLYLHMRTTDPAAALDNFILPSLLKACAQASCGVWGRELHGF 102
           Y+ ++  +        + + ++ MR  D    + NF    LLK C   +    G+E+HG 
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY--LLKVCGDEAELRVGKEIHGL 162

Query: 103 AVKNGFATDVFVCNALMNMYEKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEA 162
            VK+GF+ D+F    L NMY KC  +  AR VFD+MPERD+VSW+T++  Y ++     A
Sbjct: 163 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 222

Query: 163 LRLVGEMHFVGVKLSGVALISVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTALI 222
           L +V  M    +K S + ++SV+     L  +  G+ +HGY +R+  D    V ++TAL+
Sbjct: 223 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD--SLVNISTALV 282

Query: 223 NMYCKGECLESAQRLFDSLSQRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNEI 282
           +MY K   LE+A++LFD + +R+VVSW SMI   + N    E    F +ML+E + P ++
Sbjct: 283 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 342

Query: 283 TLLSLITACGFVRTLDLGKCLHAYLLRNGFGMSLALATALIDMYGKCGQVGYARALFNGV 342
           +++  + AC  +  L+ G+ +H   +  G   ++++  +LI MY KC +V  A ++F  +
Sbjct: 343 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 402

Query: 343 EEKDVKIWSAMISTYAYVSCIDQAFGLFLEMLDNEVKPNKVTMVSLLSSCAEVGALDLGK 402
           + + +  W+AMI  +A       A   F +M    VKP+  T VS++++ AE+      K
Sbjct: 403 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 462

Query: 403 WTHAYIRRHDLEVDVILETALINMYAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSMHG 462
           W H  + R  L+ +V + TAL++MYAKCG + IAR +FD  + R +  WNAM+ G+  HG
Sbjct: 463 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 522

Query: 463 CGTEALELFSEMESHGVKPNDITFISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIEHY 522
            G  ALELF EM+   +KPN +TF+S+  ACSHSGLV  G K F  M  ++ I   ++HY
Sbjct: 523 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 582

Query: 523 GCLVDLLGRAGRLDEAHDIIENMPMRPNTITWGALLAACKLHKNLALGEVAARKILELDP 582
           G +VDLLGRAGRL+EA D I  MP++P    +GA+L AC++HKN+   E AA ++ EL+P
Sbjct: 583 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNP 642

Query: 583 QNCGYSVLKSNIYASAKRWNDVTSVRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTCT 642
            + GY VL +NIY +A  W  V  VR +M   G++K PG S +E+   +H F SG     
Sbjct: 643 DDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHP 702

Query: 643 QTTEVYEMVTEMCIKLREAGYTPNTSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMAPG 702
            + ++Y  + ++   ++EAGY P+T+ V L VE + KE  LS HSEKLA++FGL++   G
Sbjct: 703 DSKKIYAFLEKLICHIKEAGYVPDTNLV-LGVENDVKEQLLSTHSEKLAISFGLLNTTAG 762

Query: 703 TPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 755
           T I + KNLR+C DCH ATK +S + GR I+VRD  RFHHF  G CSC  YW
Sbjct: 763 TTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

BLAST of Lsi06G007940 vs. Swiss-Prot
Match: PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1)

HSP 1 Score: 546.2 bits (1406), Expect = 5.6e-154
Identity = 293/745 (39.33%), Postives = 432/745 (57.99%), Query Frame = 1

Query: 43  YNLLISSYTNNQLPQASFRLYLHMRTTDPAAALDNFILPSLLKACAQASCGVWGRELHGF 102
           YN LI  Y ++ L   +  L+L M  +    + D +  P  L ACA++     G ++HG 
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNS--GISPDKYTFPFGLSACAKSRAKGNGIQIHGL 161

Query: 103 AVKNGFATDVFVCNALMNMYEKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEA 162
            VK G+A D+FV N+L++ Y +CG L SAR VFD+M ER+VVSW++M+  Y R     +A
Sbjct: 162 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 221

Query: 163 LRLVGEM-HFVGVKLSGVALISVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTAL 222
           + L   M     V  + V ++ VI    +L D+++G  V+ +I RN G +++   + +AL
Sbjct: 222 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSG-IEVNDLMVSAL 281

Query: 223 INMYCKGECLESAQRLFDSLSQRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNE 282
           ++MY K   ++ A+RLFD     ++    +M +  +      E    FN M++  + P+ 
Sbjct: 282 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 341

Query: 283 ITLLSLITACGFVRTLDLGKCLHAYLLRNGFGMSLALATALIDMYGKC------------ 342
           I++LS I++C  +R +  GK  H Y+LRNGF     +  ALIDMY KC            
Sbjct: 342 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 401

Query: 343 -------------------GQVGYARALFNGVEEKDVKIWSAMISTYAYVSCIDQAFGLF 402
                              G+V  A   F  + EK++  W+ +IS     S  ++A  +F
Sbjct: 402 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 461

Query: 403 LEMLDNE-VKPNKVTMVSLLSSCAEVGALDLGKWTHAYIRRHDLEVDVILETALINMYAK 462
             M   E V  + VTM+S+ S+C  +GALDL KW + YI ++ +++DV L T L++M+++
Sbjct: 462 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 521

Query: 463 CGDLTIARSLFDEATRRDIHMWNAMMAGFSMHGCGTEALELFSEMESHGVKPNDITFISI 522
           CGD   A S+F+  T RD+  W A +   +M G    A+ELF +M   G+KP+ + F+  
Sbjct: 522 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 581

Query: 523 FHACSHSGLVADGKKHFNRMVHDFGIVPKIEHYGCLVDLLGRAGRLDEAHDIIENMPMRP 582
             ACSH GLV  GK+ F  M+   G+ P+  HYGC+VDLLGRAG L+EA  +IE+MPM P
Sbjct: 582 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 641

Query: 583 NTITWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVRE 642
           N + W +LLAAC++  N+ +   AA KI  L P+  G  VL SN+YASA RWND+  VR 
Sbjct: 642 NDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRL 701

Query: 643 TMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTCTQTTEVYEMVTEMCIKLREAGYTPNTSA 702
           +M   G++K PG S I++ G  H F SGD++  +   +  M+ E+  +    G+ P+ S 
Sbjct: 702 SMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSN 761

Query: 703 VLLNVEEEEKEFALSYHSEKLAMAFGLISMAPGTPIRIVKNLRICDDCHAATKLLSKIYG 755
           VL++V+E+EK F LS HSEKLAMA+GLIS   GT IRIVKNLR+C DCH+  K  SK+Y 
Sbjct: 762 VLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYN 821

BLAST of Lsi06G007940 vs. Swiss-Prot
Match: PP320_ARATH (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana GN=DOT4 PE=2 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 2.9e-150
Identity = 272/713 (38.15%), Postives = 421/713 (59.05%), Query Frame = 1

Query: 43  YNLLISSYTNNQLPQASFRLYLHMRTTDPAAALDNFILPSLLKACAQASCGVWGRELHGF 102
           +N+L++    +     S  L+  M ++     +D++    + K+ +       G +LHGF
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSS--GVEMDSYTFSCVSKSFSSLRSVHGGEQLHGF 222

Query: 103 AVKNGFATDVFVCNALMNMYEKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEA 162
            +K+GF     V N+L+  Y K   + SAR VFD+M ERDV+SW++++  YV +    + 
Sbjct: 223 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 282

Query: 163 LRLVGEMHFVGVKLSGVALISVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTALI 222
           L +  +M   G+++    ++SV     +   +  GRAVH   V+       E      L+
Sbjct: 283 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC--FSREDRFCNTLL 342

Query: 223 NMYCKGECLESAQRLFDSLSQRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNEI 282
           +MY K   L+SA+ +F  +S RSVVS+TSMIAG        E  K F  M EE I P+  
Sbjct: 343 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 402

Query: 283 TLLSLITACGFVRTLDLGKCLHAYLLRNGFGMSLALATALIDMYGKCGQVGYARALFNGV 342
           T+ +++  C   R LD GK +H ++  N  G  + ++ AL+DMY KCG +  A  +F+ +
Sbjct: 403 TVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM 462

Query: 343 EEKDVKIWSAMISTYAYVSCIDQAFGLFLEMLDNE-VKPNKVTMVSLLSSCAEVGALDLG 402
             KD+  W+ +I  Y+     ++A  LF  +L+ +   P++ T+  +L +CA + A D G
Sbjct: 463 RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 522

Query: 403 KWTHAYIRRHDLEVDVILETALINMYAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSMH 462
           +  H YI R+    D  +  +L++MYAKCG L +A  LFD+   +D+  W  M+AG+ MH
Sbjct: 523 REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMH 582

Query: 463 GCGTEALELFSEMESHGVKPNDITFISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIEH 522
           G G EA+ LF++M   G++ ++I+F+S+ +ACSHSGLV +G + FN M H+  I P +EH
Sbjct: 583 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 642

Query: 523 YGCLVDLLGRAGRLDEAHDIIENMPMRPNTITWGALLAACKLHKNLALGEVAARKILELD 582
           Y C+VD+L R G L +A+  IENMP+ P+   WGALL  C++H ++ L E  A K+ EL+
Sbjct: 643 YACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELE 702

Query: 583 PQNCGYSVLKSNIYASAKRWNDVTSVRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTC 642
           P+N GY VL +NIYA A++W  V  +R+ +   G++K PG SWIE+ G ++ F +GD + 
Sbjct: 703 PENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSN 762

Query: 643 TQTTEVYEMVTEMCIKLREAGYTPNTSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMAP 702
            +T  +   + ++  ++ E GY+P T   L++ EE EKE AL  HSEKLAMA G+IS   
Sbjct: 763 PETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGH 822

Query: 703 GTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 755
           G  IR+ KNLR+C DCH   K +SK+  R I++RD NRFH F +G+CSC G+W
Sbjct: 823 GKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871

BLAST of Lsi06G007940 vs. Swiss-Prot
Match: PP341_ARATH (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 2.7e-148
Identity = 268/714 (37.54%), Postives = 415/714 (58.12%), Query Frame = 1

Query: 43  YNLLISSYTNNQLPQASFRLYLHMR-TTDPAAALDNFILPSLLKACAQASCGVWGRELHG 102
           +N+L+  ++ N+ P +S  ++ H+R +TD       +     + A +       GR +HG
Sbjct: 86  FNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA--ISAASGFRDDRAGRVIHG 145

Query: 103 FAVKNGFATDVFVCNALMNMYEKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGE 162
            AV +G  +++ + + ++ MY K   +  AR VFD+MPE+D + W+TM+  Y +++ + E
Sbjct: 146 QAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVE 205

Query: 163 ALRLVGEM-HFVGVKLSGVALISVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTA 222
           ++++  ++ +    +L    L+ ++    EL +++ G  +H  +    G    +  LT  
Sbjct: 206 SIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS-LATKTGCYSHDYVLT-G 265

Query: 223 LINMYCKGECLESAQRLFDSLSQRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPN 282
            I++Y K   ++    LF    +  +V++ +MI G   N         F  ++       
Sbjct: 266 FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLR 325

Query: 283 EITLLSLITACGFVRTLDLGKCLHAYLLRNGFGMSLALATALIDMYGKCGQVGYARALFN 342
             TL+SL+   G +  +     +H Y L++ F    +++TAL  +Y K  ++  AR LF+
Sbjct: 326 SSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFD 385

Query: 343 GVEEKDVKIWSAMISTYAYVSCIDQAFGLFLEMLDNEVKPNKVTMVSLLSSCAEVGALDL 402
              EK +  W+AMIS Y      + A  LF EM  +E  PN VT+  +LS+CA++GAL L
Sbjct: 386 ESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSL 445

Query: 403 GKWTHAYIRRHDLEVDVILETALINMYAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSM 462
           GKW H  +R  D E  + + TALI MYAKCG +  AR LFD  T+++   WN M++G+ +
Sbjct: 446 GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGL 505

Query: 463 HGCGTEALELFSEMESHGVKPNDITFISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIE 522
           HG G EAL +F EM + G+ P  +TF+ + +ACSH+GLV +G + FN M+H +G  P ++
Sbjct: 506 HGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 565

Query: 523 HYGCLVDLLGRAGRLDEAHDIIENMPMRPNTITWGALLAACKLHKNLALGEVAARKILEL 582
           HY C+VD+LGRAG L  A   IE M + P +  W  LL AC++HK+  L    + K+ EL
Sbjct: 566 HYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFEL 625

Query: 583 DPQNCGYSVLKSNIYASAKRWNDVTSVRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKT 642
           DP N GY VL SNI+++ + +    +VR+T     + K PG + IE+  + H F SGD++
Sbjct: 626 DPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQS 685

Query: 643 CTQTTEVYEMVTEMCIKLREAGYTPNTSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMA 702
             Q  E+YE + ++  K+REAGY P T   L +VEEEE+E  +  HSE+LA+AFGLI+  
Sbjct: 686 HPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATE 745

Query: 703 PGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 755
           PGT IRI+KNLR+C DCH  TKL+SKI  R I+VRD NRFHHF +G CSC  YW
Sbjct: 746 PGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792

BLAST of Lsi06G007940 vs. Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.1e-146
Identity = 260/602 (43.19%), Postives = 381/602 (63.29%), Query Frame = 1

Query: 155 RSKSFGEALRLVGEMHFVGVKLSGVALISVIGVFGELLDMKSGRAVHGYIVRNVGDVKME 214
           +SK+F E  ++ G +  +G  L      S+I ++     +++GR    + V +    + +
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMY-----VQNGRLEDAHKVFDKSPHR-D 205

Query: 215 VPLTTALINMYCKGECLESAQRLFDSLSQRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLE 274
           V   TALI  Y     +E+AQ+LFD +  + VVSW +MI+G        E  + F  M++
Sbjct: 206 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 265

Query: 275 EKIFPNEITLLSLITACGFVRTLDLGKCLHAYLLRNGFGMSLALATALIDMYGKCGQVGY 334
             + P+E T++++++AC    +++LG+ +H ++  +GFG +L +  ALID+Y KCG++  
Sbjct: 266 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 325

Query: 335 ARALFNGVEEKDVKIWSAMISTYAYVSCIDQAFGLFLEMLDNEVKPNKVTMVSLLSSCAE 394
           A  LF  +  KDV  W+ +I  Y +++   +A  LF EML +   PN VTM+S+L +CA 
Sbjct: 326 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 385

Query: 395 VGALDLGKWTHAYI--RRHDLEVDVILETALINMYAKCGDLTIARSLFDEATRRDIHMWN 454
           +GA+D+G+W H YI  R   +     L T+LI+MYAKCGD+  A  +F+    + +  WN
Sbjct: 386 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 445

Query: 455 AMMAGFSMHGCGTEALELFSEMESHGVKPNDITFISIFHACSHSGLVADGKKHFNRMVHD 514
           AM+ GF+MHG    + +LFS M   G++P+DITF+ +  ACSHSG++  G+  F  M  D
Sbjct: 446 AMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD 505

Query: 515 FGIVPKIEHYGCLVDLLGRAGRLDEAHDIIENMPMRPNTITWGALLAACKLHKNLALGEV 574
           + + PK+EHYGC++DLLG +G   EA ++I  M M P+ + W +LL ACK+H N+ LGE 
Sbjct: 506 YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGES 565

Query: 575 AARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVRETMNHLGMKKEPGLSWIEVNGSIH 634
            A  +++++P+N G  VL SNIYASA RWN+V   R  +N  GMKK PG S IE++  +H
Sbjct: 566 FAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVH 625

Query: 635 HFKSGDKTCTQTTEVYEMVTEMCIKLREAGYTPNTSAVLLNVEEEEKEFALSYHSEKLAM 694
            F  GDK   +  E+Y M+ EM + L +AG+ P+TS VL  +EEE KE AL +HSEKLA+
Sbjct: 626 EFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 685

Query: 695 AFGLISMAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLG 754
           AFGLIS  PGT + IVKNLR+C +CH ATKL+SKIY R II RDR RFHHF +G CSC  
Sbjct: 686 AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCND 741

BLAST of Lsi06G007940 vs. TrEMBL
Match: A0A0A0LYC2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690260 PE=4 SV=1)

HSP 1 Score: 1364.4 bits (3530), Expect = 0.0e+00
Identity = 661/752 (87.90%), Postives = 700/752 (93.09%), Query Frame = 1

Query: 3   SGHSHLNLQHTQQIHAHFIKTQFHKPHPFFSQSHFTPEANYNLLISSYTNNQLPQASFRL 62
           SGHSHLNLQ T Q+HAHFIKTQFH PHPFFSQSHFTPEANYNLLISSYTNN LPQASF  
Sbjct: 15  SGHSHLNLQQTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLISSYTNNHLPQASFNC 74

Query: 63  YLHMRTTDPAAALDNFILPSLLKACAQASCGVWGRELHGFAVKNGFATDVFVCNALMNMY 122
           YLHMR+ D AAALDNFILPSLLKACAQAS G  GRELHGFA KNGFA+DVFVCNALMNMY
Sbjct: 75  YLHMRSND-AAALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMY 134

Query: 123 EKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEALRLVGEMHFVGVKLSGVALI 182
           EKCG LVSARLVFD+MPERDVVSW+TMLGCYVRSK+FGEALRLV EM FVGVKLSGVALI
Sbjct: 135 EKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALI 194

Query: 183 SVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTALINMYCKGECLESAQRLFDSLS 242
           S+I VFG LLDMKSGRAVHGYIVRNVGD KMEV +TTALI+MYCKG CL SAQRLFD LS
Sbjct: 195 SLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLS 254

Query: 243 QRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNEITLLSLITACGFVRTLDLGKC 302
           +RSVVSWT MIAGCI +CRL EGAKNFNRMLEEK+FPNEITLLSLIT CGFV TLDLGK 
Sbjct: 255 KRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKW 314

Query: 303 LHAYLLRNGFGMSLALATALIDMYGKCGQVGYARALFNGVEEKDVKIWSAMISTYAYVSC 362
            HAYLLRNGFGMSLAL TALIDMYGKCGQVGYARALFNGV++KDVKIWS +IS YA+VSC
Sbjct: 315 FHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSC 374

Query: 363 IDQAFGLFLEMLDNEVKPNKVTMVSLLSSCAEVGALDLGKWTHAYIRRHDLEVDVILETA 422
           +DQ F LF+EML+N+VKPN VTMVSLLS CAE GALDLGKWTHAYI RH LEVDVILETA
Sbjct: 375 MDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETA 434

Query: 423 LINMYAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSMHGCGTEALELFSEMESHGVKPN 482
           LINMYAKCGD+TIARSLF+EA +RDI MWN MMAGFSMHGCG EALELFSEMESHGV+PN
Sbjct: 435 LINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPN 494

Query: 483 DITFISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIEHYGCLVDLLGRAGRLDEAHDII 542
           DITF+SIFHACSHSGLV +GKK+FN+MVHDFGIVPK+EHYGCLVDLLGRAG LDEAH+II
Sbjct: 495 DITFVSIFHACSHSGLVVEGKKYFNKMVHDFGIVPKMEHYGCLVDLLGRAGHLDEAHNII 554

Query: 543 ENMPMRPNTITWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWN 602
           ENMPMRPNTI WGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWN
Sbjct: 555 ENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWN 614

Query: 603 DVTSVRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTCTQTTEVYEMVTEMCIKLREAG 662
           DVTSVRE M+H GMKKEPGLSWIEV+GS+HHFKSGDK CTQTT+VYEMVTEMCIKLRE+G
Sbjct: 615 DVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESG 674

Query: 663 YTPNTSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMAPGTPIRIVKNLRICDDCHAATK 722
           YTPNT+AVLLN++EEEKE ALSYHSEKLA AFGLIS APGTPIRIVKNLRICDDCHAATK
Sbjct: 675 YTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATK 734

Query: 723 LLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 755
           LLSKIYGRTIIVRDRNRFHHFSEGYCSC+GYW
Sbjct: 735 LLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 765

BLAST of Lsi06G007940 vs. TrEMBL
Match: W9RT88_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024533 PE=4 SV=1)

HSP 1 Score: 962.6 bits (2487), Expect = 2.8e-277
Identity = 460/753 (61.09%), Postives = 585/753 (77.69%), Query Frame = 1

Query: 5   HSHLNLQHTQQIHAHFIKTQFHKPHPF---FSQSHFTPEANYNLLISSYTNNQLPQASFR 64
           + H N+  TQQIHAH IKT F         F   H +PEA YN LI+SY NN  P+ S +
Sbjct: 55  YDHPNIDQTQQIHAHMIKTHFDHSLQIPLSFLPPHLSPEAQYNFLITSYNNNNFPKQSLK 114

Query: 65  LYLHMRTTDPAAALDNFILPSLLKACAQASCGVWGRELHGFAVKNGFATDVFVCNALMNM 124
           +Y HMR  D    +D+F  PS+LKAC Q S  V G+E+HGF +KNG   DVFVCNALM M
Sbjct: 115 IYAHMRRFD--VQVDSFTAPSVLKACGQCSLVVLGKEIHGFVLKNGLDGDVFVCNALMQM 174

Query: 125 YEKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEALRLVGEMHFVGVKLSGVAL 184
           Y +CGS VSARL+FD+M ERDVVSWSTM+  YVR++  GEAL L+ EMH V V+ S +A+
Sbjct: 175 YSECGSAVSARLMFDQMAERDVVSWSTMIRSYVRNRLLGEALDLIREMHSVRVRPSQIAM 234

Query: 185 ISVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTALINMYCKGECLESAQRLFDSL 244
           IS++ +F +L ++K  + +HGY++RN+ + KM VP+TT+L++MY K   L  A+ LFD L
Sbjct: 235 ISMVNLFADLTNVKLAKTMHGYVIRNMNNEKMGVPITTSLLDMYAKCGNLAYARWLFDGL 294

Query: 245 SQRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNEITLLSLITACGFVRTLDLGK 304
           +Q+SVVSWT+++AG I   RL +G K F  MLEE +FPNEIT+LSLI  CGFV  L+LGK
Sbjct: 295 TQKSVVSWTAIVAGYIRGNRLEKGMKLFKEMLEEGVFPNEITVLSLIIECGFVGALELGK 354

Query: 305 CLHAYLLRNGFGMSLALATALIDMYGKCGQVGYARALFNGVEEKDVKIWSAMISTYAYVS 364
            LH+Y+LRNGF MSL LATAL+DMYGKCG +  ARA+ +G ++KDV IWSA+IS  A  +
Sbjct: 355 WLHSYMLRNGFVMSLVLATALVDMYGKCGDLRSARAVSDGRDDKDVMIWSALISASAQAN 414

Query: 365 CIDQAFGLFLEMLDNEVKPNKVTMVSLLSSCAEVGALDLGKWTHAYIRRHDLEVDVILET 424
           C ++A  LF +M D  ++PN+VTMV L+S CAEVGALDLGKW H+YI +  LEVD+IL+T
Sbjct: 415 CPNEARELFSQMRDEGLRPNEVTMVRLISLCAEVGALDLGKWLHSYINQQGLEVDLILKT 474

Query: 425 ALINMYAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSMHGCGTEALELFSEMESHGVKP 484
           AL++MYAKCGD+  A +LF  +T RDI MWNAMM GF+MHGCG E L+LF EME  G++P
Sbjct: 475 ALVDMYAKCGDIDAAHALFSRSTDRDICMWNAMMTGFAMHGCGNEVLKLFEEMEILGIQP 534

Query: 485 NDITFISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIEHYGCLVDLLGRAGRLDEAHDI 544
           N+ITFI++ HACSH+GLV +GK+ F++MV+ +G+VPK+EHYGC+VDLLGRAG+L EAH++
Sbjct: 535 NEITFIAVLHACSHAGLVIEGKRFFDKMVYGYGLVPKVEHYGCMVDLLGRAGQLGEAHEL 594

Query: 545 IENMPMRPNTITWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRW 604
           I++MP++PN + WGALLAAC+L+KN +LGEVAA+ +LEL+P++CGY++L SNIYASAKRW
Sbjct: 595 IKSMPIQPNVVVWGALLAACRLYKNPSLGEVAAKHLLELEPKSCGYNILMSNIYASAKRW 654

Query: 605 NDVTSVRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTCTQTTEVYEMVTEMCIKLREA 664
           NDV  VR+ +   G+KK+PGLS IEVNG +H F  GD    QT ++YEM+ EM +KL+EA
Sbjct: 655 NDVAGVRKAIKDSGIKKQPGLSSIEVNGLVHEFSMGDNIHPQTGKIYEMLAEMSMKLKEA 714

Query: 665 GYTPNTSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMAPGTPIRIVKNLRICDDCHAAT 724
           GYTPNTS VL N++EEEKE ALS HSEKLAMAFGLI+ A GT +RIVKNLR+CDDCHAAT
Sbjct: 715 GYTPNTSVVLQNIDEEEKETALSCHSEKLAMAFGLINTAAGTTMRIVKNLRVCDDCHAAT 774

Query: 725 KLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 755
           KLLSKIYGR IIVRDRNRFHHF EG CSC  YW
Sbjct: 775 KLLSKIYGRVIIVRDRNRFHHFREGSCSCGDYW 805

BLAST of Lsi06G007940 vs. TrEMBL
Match: A0A061F229_THECC (Tetratricopeptide repeat-like superfamily protein, putative OS=Theobroma cacao GN=TCM_026249 PE=4 SV=1)

HSP 1 Score: 936.0 bits (2418), Expect = 2.8e-269
Identity = 460/748 (61.50%), Postives = 573/748 (76.60%), Query Frame = 1

Query: 7   HLNLQHTQQIHAHFIKTQFHKPHPFFSQSHFTPEANYNLLISSYTNNQLPQASFRLYLHM 66
           H  L+ T+QIHAH +KT F+        +  +P A  N LI+SYT N  P  +  +Y ++
Sbjct: 47  HPTLEQTRQIHAHMVKTHFN-------HTKLSPSAQLNFLITSYTRNSQPHNTLAIYAYL 106

Query: 67  RTTDPAAALDNFILPSLLKACAQASCGVWGRELHGFAVKNGFATDVFVCNALMNMYEKCG 126
           R TD    +DNF++P++LKAC+  S    G+E+HGFA+KNG   DVFV NAL+ MY +C 
Sbjct: 107 RRTD--YEVDNFMVPAILKACSFVSMTQLGKEIHGFALKNGLIEDVFVSNALIQMYSECR 166

Query: 127 SLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEALRLVGEMHFVGVKLSGVALISVIG 186
           S VSARL+FD M ERDVVSWSTM+  YVRSK + EAL +V +MH + V+ S VA+IS++ 
Sbjct: 167 SAVSARLLFDNMDERDVVSWSTMIRSYVRSKLYREALDIVRKMHILQVRPSEVAMISMVN 226

Query: 187 VFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTALINMYCKGECLESAQRLFDSLSQRSV 246
           +F EL D++ GRA+H Y+ RN+   KM V LTTA I+MY K   L SA  LF  L+Q+S+
Sbjct: 227 LFAELKDIEMGRAMHAYVTRNLE--KMGVHLTTAFIDMYAKSGNLASAGLLFHGLNQKSI 286

Query: 247 VSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNEITLLSLITACGFVRTLDLGKCLHAY 306
           VSWT+MIAG IH  +L EG K F RM+EE+I PNEITLLSL+  CGFV  L+LGK +HAY
Sbjct: 287 VSWTAMIAGYIHCNKLEEGGKLFARMIEERIKPNEITLLSLVVECGFVGALELGKQIHAY 346

Query: 307 LLRNGFGMSLALATALIDMYGKCGQVGYARALFNGVEEKDVKIWSAMISTYAYVSCIDQA 366
           + RNG  +SLALATAL+DMYGKCGQ+  A+A+F+ V+ KDV IWSAMI+ YA   CIDQA
Sbjct: 347 ISRNGICVSLALATALVDMYGKCGQIRNAKAVFDTVKNKDVMIWSAMIAAYAQAHCIDQA 406

Query: 367 FGLFLEMLDNEVKPNKVTMVSLLSSCAEVGALDLGKWTHAYIRRHDLEVDVILETALINM 426
             LF++M D+ V+PN+VTMV++LS CAE GALD+GKW H YI R  +E+D+IL+TALI M
Sbjct: 407 LDLFVKMRDSGVRPNQVTMVTVLSLCAEAGALDMGKWVHTYIDRQVVEMDMILQTALIEM 466

Query: 427 YAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSMHGCGTEALELFSEMESHGVKPNDITF 486
           YAKCGD+  A  LF E+  +DI MWN MMAGF MHGCG EALELFSEME  G +PNDITF
Sbjct: 467 YAKCGDIDGAWRLFRESKDQDIGMWNTMMAGFGMHGCGKEALELFSEMERVGARPNDITF 526

Query: 487 ISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIEHYGCLVDLLGRAGRLDEAHDIIENMP 546
           I + HACSH+GLV +G+  F +MVHDFG+VPK+EHYGC+VDLLGRAG LDEA+++I++MP
Sbjct: 527 IGLLHACSHAGLVKEGRLFFEKMVHDFGLVPKVEHYGCMVDLLGRAGLLDEAYEMIKSMP 586

Query: 547 MRPNTITWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTS 606
           +RPNTITW ALLAACKLHKN  LGE+AAR+++ L+PQNCGY+V  SNIYA A RWNDV  
Sbjct: 587 IRPNTITWSALLAACKLHKNTVLGEMAARQLVYLEPQNCGYNVSMSNIYAVANRWNDVAG 646

Query: 607 VRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTCTQTTEVYEMVTEMCIKLREAGYTPN 666
           VR+ M + GMKKEPGLS IEV+G +H F  GDK   Q  ++ +MV+E+  KL+EAGY  +
Sbjct: 647 VRKAMKNKGMKKEPGLSSIEVDGYVHEFIMGDKAHPQIEKINDMVSEIGKKLKEAGYMAD 706

Query: 667 TSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMAPGTPIRIVKNLRICDDCHAATKLLSK 726
           TSAVL N+++EEKE AL+YHSEKLAMAFGLIS APGTPIR+VKNLR+C+DCHAATKLLSK
Sbjct: 707 TSAVLKNIDKEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRVCNDCHAATKLLSK 766

Query: 727 IYGRTIIVRDRNRFHHFSEGYCSCLGYW 755
           IY R IIVRDR RFHHF +G CSC  YW
Sbjct: 767 IYERVIIVRDRKRFHHFRDGTCSCGDYW 783

BLAST of Lsi06G007940 vs. TrEMBL
Match: F6HVH9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0081g00690 PE=4 SV=1)

HSP 1 Score: 928.7 bits (2399), Expect = 4.5e-267
Identity = 457/755 (60.53%), Postives = 569/755 (75.36%), Query Frame = 1

Query: 3   SGHSHLNLQHTQQIHAHFIKTQFHK----PHPFFSQSHFTPEANYNLLISSYTNNQLPQA 62
           S H    L+ T+QIHAH IKT FH     P   F  S  +P A +N +I+SYT    P+ 
Sbjct: 84  SQHDLSTLEQTKQIHAHIIKTHFHHALQIPLNDFP-SGLSPSAQWNFVITSYTKRNQPRN 143

Query: 63  SFRLYLHMRTTDPAAALDNFILPSLLKACAQASCGVWGRELHGFAVKNGFATDVFVCNAL 122
           +  +Y  +R  D    +DNF+ PS+LKAC Q S    G+E+HGF +K G   DVFV NAL
Sbjct: 144 ALNVYAQLRKMD--FEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNAL 203

Query: 123 MNMYEKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEALRLVGEMHFVGVKLSG 182
           M MY +C  +  ARLVFDKM ERDVVSWSTM+    R+K F  AL L+ EM+F+ V+ S 
Sbjct: 204 MLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSE 263

Query: 183 VALISVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTALINMYCKGECLESAQRLF 242
           VA++S++ +F +  +M+ G+A+H Y++RN  +  M VP TTAL++MY K   L  A++LF
Sbjct: 264 VAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLF 323

Query: 243 DSLSQRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNEITLLSLITACGFVRTLD 302
           + L+Q++VVSWT+MIAGCI + RL EG K F RM EE IFPNEIT+LSLI  CGF   L 
Sbjct: 324 NGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQ 383

Query: 303 LGKCLHAYLLRNGFGMSLALATALIDMYGKCGQVGYARALFNGVEEKDVKIWSAMISTYA 362
           LGK LHAY+LRNGF +SLALATAL+DMYGKC  +  ARALF+  + +DV IW+AM+S YA
Sbjct: 384 LGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYA 443

Query: 363 YVSCIDQAFGLFLEMLDNEVKPNKVTMVSLLSSCAEVGALDLGKWTHAYIRRHDLEVDVI 422
             +CIDQAF LF +M  + V+P KVT+VSLLS CA  GALDLGKW H+YI +  +EVD I
Sbjct: 444 QANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCI 503

Query: 423 LETALINMYAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSMHGCGTEALELFSEMESHG 482
           L TAL++MYAKCGD+  A  LF EA  RDI MWNA++ GF+MHG G EAL++F+EME  G
Sbjct: 504 LNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQG 563

Query: 483 VKPNDITFISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIEHYGCLVDLLGRAGRLDEA 542
           VKPNDITFI + HACSH+GLV +GKK F +MVH FG+VP+IEHYGC+VDLLGRAG LDEA
Sbjct: 564 VKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEA 623

Query: 543 HDIIENMPMRPNTITWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASA 602
           H++I++MP++PNTI WGAL+AAC+LHKN  LGE+AA ++LE++P+NCGY+VL SNIYA+A
Sbjct: 624 HEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAA 683

Query: 603 KRWNDVTSVRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTCTQTTEVYEMVTEMCIKL 662
            RW+D   VR+TM  +GMKKEPG S IEVNG++H F  GD++  Q   + EM+ EM  KL
Sbjct: 684 NRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKL 743

Query: 663 REAGYTPNTSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMAPGTPIRIVKNLRICDDCH 722
            EAGY P+TS VLLN++EEEKE AL+YHSEKLAMAFGLIS AP TPIRIVKNLR+C+DCH
Sbjct: 744 NEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCH 803

Query: 723 AATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGY 754
           AATKLLSKIYGR IIVRDRNRFHHF EGYCSC  Y
Sbjct: 804 AATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDY 835

BLAST of Lsi06G007940 vs. TrEMBL
Match: A0A067JW20_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23532 PE=4 SV=1)

HSP 1 Score: 928.7 bits (2399), Expect = 4.5e-267
Identity = 448/755 (59.34%), Postives = 567/755 (75.10%), Query Frame = 1

Query: 5   HSHLNLQHTQQIHAHFIKTQFHKP-----HPFFSQSHFTPEANYNLLISSYTNNQLPQAS 64
           ++ L+L  T+QIHAH IKT F+       HPF +Q   +P+A  NLLI+SY  N  P+ +
Sbjct: 58  NNSLSLDQTKQIHAHLIKTDFNPTYKFSLHPFKAQ--LSPQALCNLLITSYIKNNEPRKA 117

Query: 65  FRLYLHMRTTDPAAALDNFILPSLLKACAQASCGVWGRELHGFAVKNGFATDVFVCNALM 124
             +Y ++R  D    +DNF +PS+LKAC Q S    G+E+HGFA+KNG   DVFVCNALM
Sbjct: 118 IYIYAYLRNVD--YEVDNFTVPSILKACCQTSMTHLGKEIHGFAIKNGIFGDVFVCNALM 177

Query: 125 NMYEKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEALRLVGEMHFVGVKLSGV 184
            MY +CG L SARL+FD MPERD VSWSTM+  Y R++ F E L+ + +M F  VK S V
Sbjct: 178 QMYTECGCLASARLLFDTMPERDAVSWSTMIRSYSRNRLFHEGLKTIKDMLFWNVKPSAV 237

Query: 185 ALISVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTALINMYCKGECLESAQRLFD 244
           A++S++ +F +L ++K G+ +H Y++RN  D K+ + L T+LI+MY K   L SA+ LFD
Sbjct: 238 AMVSMVNLFADLENIKLGKEMHAYVIRNSTDEKVSLSLVTSLIDMYAKSGNLTSARILFD 297

Query: 245 SLSQRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNEITLLSLITACGFVRTLDL 304
              ++S+VSWT++++G I +  L EG + F  M +E I PNEIT+LS+I ACGFV  L L
Sbjct: 298 GFRKKSIVSWTALVSGYIRSNNLEEGERLFIEMTKENIVPNEITMLSMIIACGFVAALKL 357

Query: 305 GKCLHAYLLRNGFGMSLALATALIDMYGKCGQVGYARALFNGVEEKDVKIWSAMISTYAY 364
           GK LHAY+LRNG+ M  ALATAL+DMYGKCG +  AR LF+ +E KDV  W+AMI+ Y  
Sbjct: 358 GKKLHAYILRNGYKMKFALATALVDMYGKCGDLRSARDLFDSLEHKDVMTWTAMITAYGQ 417

Query: 365 VSCIDQAFGLFLEMLDNEVKPNKVTMVSLLSSCAEVGALDLGKWTHAYIRRHDLEVDVIL 424
              ID AF LF++M D++V PN+VTMVSLLS CAE GALD+GKW H YI +  +E+DVIL
Sbjct: 418 TGFIDDAFDLFVQMRDHKVMPNEVTMVSLLSLCAEAGALDMGKWIHGYIDKQGVEIDVIL 477

Query: 425 ETALINMYAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSMHGCGTEALELFSEMESHGV 484
           +TAL++MYAKCGD+  A+ LF EA  RDI MWNAMMAG+ MHGCG EAL+LF++ME   V
Sbjct: 478 KTALVDMYAKCGDINGAQRLFSEAKFRDICMWNAMMAGYGMHGCGNEALKLFAQMERLDV 537

Query: 485 KPNDITFISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIEHYGCLVDLLGRAGRLDEAH 544
           +PNDITFI   HACSH+GLVA+GK+ F RMV DFG+ PK+EHYGC+VDLLGRAG+LDEA+
Sbjct: 538 EPNDITFIGALHACSHAGLVAEGKRLFERMVDDFGLNPKVEHYGCMVDLLGRAGQLDEAY 597

Query: 545 DIIENMPMRPNTITWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAK 604
           ++I+ MPM PN   WGALLAACKLHKN  LGE+A R++L L+PQNCGY VL SNIYA+A 
Sbjct: 598 EMIQRMPMTPNITIWGALLAACKLHKNPNLGELAVRELLALEPQNCGYKVLMSNIYAAAN 657

Query: 605 RWNDVTSVRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTCTQTTEVYEMVTEMCIKLR 664
           RWNDV  VR+ M   G+KKEPG+S IE+NGS+H F  GD +  Q  ++ EM+ EMC K++
Sbjct: 658 RWNDVAGVRKAMKDTGIKKEPGVSSIEINGSVHDFTMGDMSHPQIEKISEMLVEMCKKIK 717

Query: 665 EAGYTPNTSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMAPGTPIRIVKNLRICDDCHA 724
           EAGY P+TS VL N++EEEKE A++YHSEKLAMAFGLIS APG PIR+VKNLRICDDCH 
Sbjct: 718 EAGYLPDTSVVLQNIDEEEKETAVNYHSEKLAMAFGLISTAPGIPIRVVKNLRICDDCHT 777

Query: 725 ATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 755
           ATKLLSK+YGR I+VRDRNRFHHFS G CSC  YW
Sbjct: 778 ATKLLSKVYGRIIVVRDRNRFHHFSGGLCSCGDYW 808

BLAST of Lsi06G007940 vs. TAIR10
Match: AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 557.8 bits (1436), Expect = 1.1e-158
Identity = 283/712 (39.75%), Postives = 425/712 (59.69%), Query Frame = 1

Query: 43  YNLLISSYTNNQLPQASFRLYLHMRTTDPAAALDNFILPSLLKACAQASCGVWGRELHGF 102
           Y+ ++  +        + + ++ MR  D    + NF    LLK C   +    G+E+HG 
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTY--LLKVCGDEAELRVGKEIHGL 162

Query: 103 AVKNGFATDVFVCNALMNMYEKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEA 162
            VK+GF+ D+F    L NMY KC  +  AR VFD+MPERD+VSW+T++  Y ++     A
Sbjct: 163 LVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMA 222

Query: 163 LRLVGEMHFVGVKLSGVALISVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTALI 222
           L +V  M    +K S + ++SV+     L  +  G+ +HGY +R+  D    V ++TAL+
Sbjct: 223 LEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD--SLVNISTALV 282

Query: 223 NMYCKGECLESAQRLFDSLSQRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNEI 282
           +MY K   LE+A++LFD + +R+VVSW SMI   + N    E    F +ML+E + P ++
Sbjct: 283 DMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDV 342

Query: 283 TLLSLITACGFVRTLDLGKCLHAYLLRNGFGMSLALATALIDMYGKCGQVGYARALFNGV 342
           +++  + AC  +  L+ G+ +H   +  G   ++++  +LI MY KC +V  A ++F  +
Sbjct: 343 SVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 402

Query: 343 EEKDVKIWSAMISTYAYVSCIDQAFGLFLEMLDNEVKPNKVTMVSLLSSCAEVGALDLGK 402
           + + +  W+AMI  +A       A   F +M    VKP+  T VS++++ AE+      K
Sbjct: 403 QSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK 462

Query: 403 WTHAYIRRHDLEVDVILETALINMYAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSMHG 462
           W H  + R  L+ +V + TAL++MYAKCG + IAR +FD  + R +  WNAM+ G+  HG
Sbjct: 463 WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHG 522

Query: 463 CGTEALELFSEMESHGVKPNDITFISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIEHY 522
            G  ALELF EM+   +KPN +TF+S+  ACSHSGLV  G K F  M  ++ I   ++HY
Sbjct: 523 FGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHY 582

Query: 523 GCLVDLLGRAGRLDEAHDIIENMPMRPNTITWGALLAACKLHKNLALGEVAARKILELDP 582
           G +VDLLGRAGRL+EA D I  MP++P    +GA+L AC++HKN+   E AA ++ EL+P
Sbjct: 583 GAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNP 642

Query: 583 QNCGYSVLKSNIYASAKRWNDVTSVRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTCT 642
            + GY VL +NIY +A  W  V  VR +M   G++K PG S +E+   +H F SG     
Sbjct: 643 DDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHP 702

Query: 643 QTTEVYEMVTEMCIKLREAGYTPNTSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMAPG 702
            + ++Y  + ++   ++EAGY P+T+ V L VE + KE  LS HSEKLA++FGL++   G
Sbjct: 703 DSKKIYAFLEKLICHIKEAGYVPDTNLV-LGVENDVKEQLLSTHSEKLAISFGLLNTTAG 762

Query: 703 TPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 755
           T I + KNLR+C DCH ATK +S + GR I+VRD  RFHHF  G CSC  YW
Sbjct: 763 TTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

BLAST of Lsi06G007940 vs. TAIR10
Match: AT3G22690.1 (AT3G22690.1 Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatricopeptide repeat (InterPro:IPR002885))

HSP 1 Score: 542.7 bits (1397), Expect = 3.5e-154
Identity = 292/741 (39.41%), Postives = 430/741 (58.03%), Query Frame = 1

Query: 43  YNLLISSYTNNQLPQASFRLYLHMRTTDPAAALDNFILPSLLKACAQASCGVWGRELHGF 102
           YN LI  Y ++ L   +  L+L M  +    + D +  P  L ACA++     G ++HG 
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNS--GISPDKYTFPFGLSACAKSRAKGNGIQIHGL 161

Query: 103 AVKNGFATDVFVCNALMNMYEKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEA 162
            VK G+A D+FV N+L++ Y +CG L SAR VFD+M ER+VVSW++M+  Y R     +A
Sbjct: 162 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 221

Query: 163 LRLVGEM-HFVGVKLSGVALISVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTAL 222
           + L   M     V  + V ++ VI    +L D+++G  V+ +I RN G +++   + +AL
Sbjct: 222 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFI-RNSG-IEVNDLMVSAL 281

Query: 223 INMYCKGECLESAQRLFDSLSQRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNE 282
           ++MY K   ++ A+RLFD     ++    +M +  +      E    FN M++  + P+ 
Sbjct: 282 VDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDR 341

Query: 283 ITLLSLITACGFVRTLDLGKCLHAYLLRNGFGMSLALATALIDMYGKC------------ 342
           I++LS I++C  +R +  GK  H Y+LRNGF     +  ALIDMY KC            
Sbjct: 342 ISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDR 401

Query: 343 -------------------GQVGYARALFNGVEEKDVKIWSAMISTYAYVSCIDQAFGLF 402
                              G+V  A   F  + EK++  W+ +IS     S  ++A  +F
Sbjct: 402 MSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVF 461

Query: 403 LEMLDNE-VKPNKVTMVSLLSSCAEVGALDLGKWTHAYIRRHDLEVDVILETALINMYAK 462
             M   E V  + VTM+S+ S+C  +GALDL KW + YI ++ +++DV L T L++M+++
Sbjct: 462 CSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSR 521

Query: 463 CGDLTIARSLFDEATRRDIHMWNAMMAGFSMHGCGTEALELFSEMESHGVKPNDITFISI 522
           CGD   A S+F+  T RD+  W A +   +M G    A+ELF +M   G+KP+ + F+  
Sbjct: 522 CGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGA 581

Query: 523 FHACSHSGLVADGKKHFNRMVHDFGIVPKIEHYGCLVDLLGRAGRLDEAHDIIENMPMRP 582
             ACSH GLV  GK+ F  M+   G+ P+  HYGC+VDLLGRAG L+EA  +IE+MPM P
Sbjct: 582 LTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP 641

Query: 583 NTITWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVRE 642
           N + W +LLAAC++  N+ +   AA KI  L P+  G  VL SN+YASA RWND+  VR 
Sbjct: 642 NDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRL 701

Query: 643 TMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTCTQTTEVYEMVTEMCIKLREAGYTPNTSA 702
           +M   G++K PG S I++ G  H F SGD++  +   +  M+ E+  +    G+ P+ S 
Sbjct: 702 SMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSN 761

Query: 703 VLLNVEEEEKEFALSYHSEKLAMAFGLISMAPGTPIRIVKNLRICDDCHAATKLLSKIYG 751
           VL++V+E+EK F LS HSEKLAMA+GLIS   GT IRIVKNLR+C DCH+  K  SK+Y 
Sbjct: 762 VLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYN 821

BLAST of Lsi06G007940 vs. TAIR10
Match: AT4G18750.1 (AT4G18750.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 533.9 bits (1374), Expect = 1.6e-151
Identity = 272/713 (38.15%), Postives = 421/713 (59.05%), Query Frame = 1

Query: 43  YNLLISSYTNNQLPQASFRLYLHMRTTDPAAALDNFILPSLLKACAQASCGVWGRELHGF 102
           +N+L++    +     S  L+  M ++     +D++    + K+ +       G +LHGF
Sbjct: 163 WNILMNELAKSGDFSGSIGLFKKMMSS--GVEMDSYTFSCVSKSFSSLRSVHGGEQLHGF 222

Query: 103 AVKNGFATDVFVCNALMNMYEKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEA 162
            +K+GF     V N+L+  Y K   + SAR VFD+M ERDV+SW++++  YV +    + 
Sbjct: 223 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 282

Query: 163 LRLVGEMHFVGVKLSGVALISVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTALI 222
           L +  +M   G+++    ++SV     +   +  GRAVH   V+       E      L+
Sbjct: 283 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC--FSREDRFCNTLL 342

Query: 223 NMYCKGECLESAQRLFDSLSQRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNEI 282
           +MY K   L+SA+ +F  +S RSVVS+TSMIAG        E  K F  M EE I P+  
Sbjct: 343 DMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVY 402

Query: 283 TLLSLITACGFVRTLDLGKCLHAYLLRNGFGMSLALATALIDMYGKCGQVGYARALFNGV 342
           T+ +++  C   R LD GK +H ++  N  G  + ++ AL+DMY KCG +  A  +F+ +
Sbjct: 403 TVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEM 462

Query: 343 EEKDVKIWSAMISTYAYVSCIDQAFGLFLEMLDNE-VKPNKVTMVSLLSSCAEVGALDLG 402
             KD+  W+ +I  Y+     ++A  LF  +L+ +   P++ T+  +L +CA + A D G
Sbjct: 463 RVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG 522

Query: 403 KWTHAYIRRHDLEVDVILETALINMYAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSMH 462
           +  H YI R+    D  +  +L++MYAKCG L +A  LFD+   +D+  W  M+AG+ MH
Sbjct: 523 REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMH 582

Query: 463 GCGTEALELFSEMESHGVKPNDITFISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIEH 522
           G G EA+ LF++M   G++ ++I+F+S+ +ACSHSGLV +G + FN M H+  I P +EH
Sbjct: 583 GFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEH 642

Query: 523 YGCLVDLLGRAGRLDEAHDIIENMPMRPNTITWGALLAACKLHKNLALGEVAARKILELD 582
           Y C+VD+L R G L +A+  IENMP+ P+   WGALL  C++H ++ L E  A K+ EL+
Sbjct: 643 YACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELE 702

Query: 583 PQNCGYSVLKSNIYASAKRWNDVTSVRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTC 642
           P+N GY VL +NIYA A++W  V  +R+ +   G++K PG SWIE+ G ++ F +GD + 
Sbjct: 703 PENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSN 762

Query: 643 TQTTEVYEMVTEMCIKLREAGYTPNTSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMAP 702
            +T  +   + ++  ++ E GY+P T   L++ EE EKE AL  HSEKLAMA G+IS   
Sbjct: 763 PETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISSGH 822

Query: 703 GTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 755
           G  IR+ KNLR+C DCH   K +SK+  R I++RD NRFH F +G+CSC G+W
Sbjct: 823 GKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 871

BLAST of Lsi06G007940 vs. TAIR10
Match: AT4G30700.1 (AT4G30700.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 527.3 bits (1357), Expect = 1.5e-149
Identity = 268/714 (37.54%), Postives = 415/714 (58.12%), Query Frame = 1

Query: 43  YNLLISSYTNNQLPQASFRLYLHMR-TTDPAAALDNFILPSLLKACAQASCGVWGRELHG 102
           +N+L+  ++ N+ P +S  ++ H+R +TD       +     + A +       GR +HG
Sbjct: 86  FNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA--ISAASGFRDDRAGRVIHG 145

Query: 103 FAVKNGFATDVFVCNALMNMYEKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGE 162
            AV +G  +++ + + ++ MY K   +  AR VFD+MPE+D + W+TM+  Y +++ + E
Sbjct: 146 QAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVE 205

Query: 163 ALRLVGEM-HFVGVKLSGVALISVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTA 222
           ++++  ++ +    +L    L+ ++    EL +++ G  +H  +    G    +  LT  
Sbjct: 206 SIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS-LATKTGCYSHDYVLT-G 265

Query: 223 LINMYCKGECLESAQRLFDSLSQRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPN 282
            I++Y K   ++    LF    +  +V++ +MI G   N         F  ++       
Sbjct: 266 FISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLR 325

Query: 283 EITLLSLITACGFVRTLDLGKCLHAYLLRNGFGMSLALATALIDMYGKCGQVGYARALFN 342
             TL+SL+   G +  +     +H Y L++ F    +++TAL  +Y K  ++  AR LF+
Sbjct: 326 SSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFD 385

Query: 343 GVEEKDVKIWSAMISTYAYVSCIDQAFGLFLEMLDNEVKPNKVTMVSLLSSCAEVGALDL 402
              EK +  W+AMIS Y      + A  LF EM  +E  PN VT+  +LS+CA++GAL L
Sbjct: 386 ESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSL 445

Query: 403 GKWTHAYIRRHDLEVDVILETALINMYAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSM 462
           GKW H  +R  D E  + + TALI MYAKCG +  AR LFD  T+++   WN M++G+ +
Sbjct: 446 GKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGL 505

Query: 463 HGCGTEALELFSEMESHGVKPNDITFISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIE 522
           HG G EAL +F EM + G+ P  +TF+ + +ACSH+GLV +G + FN M+H +G  P ++
Sbjct: 506 HGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVK 565

Query: 523 HYGCLVDLLGRAGRLDEAHDIIENMPMRPNTITWGALLAACKLHKNLALGEVAARKILEL 582
           HY C+VD+LGRAG L  A   IE M + P +  W  LL AC++HK+  L    + K+ EL
Sbjct: 566 HYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFEL 625

Query: 583 DPQNCGYSVLKSNIYASAKRWNDVTSVRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKT 642
           DP N GY VL SNI+++ + +    +VR+T     + K PG + IE+  + H F SGD++
Sbjct: 626 DPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQS 685

Query: 643 CTQTTEVYEMVTEMCIKLREAGYTPNTSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMA 702
             Q  E+YE + ++  K+REAGY P T   L +VEEEE+E  +  HSE+LA+AFGLI+  
Sbjct: 686 HPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATE 745

Query: 703 PGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 755
           PGT IRI+KNLR+C DCH  TKL+SKI  R I+VRD NRFHHF +G CSC  YW
Sbjct: 746 PGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792

BLAST of Lsi06G007940 vs. TAIR10
Match: AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 521.9 bits (1343), Expect = 6.4e-148
Identity = 260/602 (43.19%), Postives = 381/602 (63.29%), Query Frame = 1

Query: 155 RSKSFGEALRLVGEMHFVGVKLSGVALISVIGVFGELLDMKSGRAVHGYIVRNVGDVKME 214
           +SK+F E  ++ G +  +G  L      S+I ++     +++GR    + V +    + +
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMY-----VQNGRLEDAHKVFDKSPHR-D 205

Query: 215 VPLTTALINMYCKGECLESAQRLFDSLSQRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLE 274
           V   TALI  Y     +E+AQ+LFD +  + VVSW +MI+G        E  + F  M++
Sbjct: 206 VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 265

Query: 275 EKIFPNEITLLSLITACGFVRTLDLGKCLHAYLLRNGFGMSLALATALIDMYGKCGQVGY 334
             + P+E T++++++AC    +++LG+ +H ++  +GFG +L +  ALID+Y KCG++  
Sbjct: 266 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 325

Query: 335 ARALFNGVEEKDVKIWSAMISTYAYVSCIDQAFGLFLEMLDNEVKPNKVTMVSLLSSCAE 394
           A  LF  +  KDV  W+ +I  Y +++   +A  LF EML +   PN VTM+S+L +CA 
Sbjct: 326 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 385

Query: 395 VGALDLGKWTHAYI--RRHDLEVDVILETALINMYAKCGDLTIARSLFDEATRRDIHMWN 454
           +GA+D+G+W H YI  R   +     L T+LI+MYAKCGD+  A  +F+    + +  WN
Sbjct: 386 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 445

Query: 455 AMMAGFSMHGCGTEALELFSEMESHGVKPNDITFISIFHACSHSGLVADGKKHFNRMVHD 514
           AM+ GF+MHG    + +LFS M   G++P+DITF+ +  ACSHSG++  G+  F  M  D
Sbjct: 446 AMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD 505

Query: 515 FGIVPKIEHYGCLVDLLGRAGRLDEAHDIIENMPMRPNTITWGALLAACKLHKNLALGEV 574
           + + PK+EHYGC++DLLG +G   EA ++I  M M P+ + W +LL ACK+H N+ LGE 
Sbjct: 506 YKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGES 565

Query: 575 AARKILELDPQNCGYSVLKSNIYASAKRWNDVTSVRETMNHLGMKKEPGLSWIEVNGSIH 634
            A  +++++P+N G  VL SNIYASA RWN+V   R  +N  GMKK PG S IE++  +H
Sbjct: 566 FAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVH 625

Query: 635 HFKSGDKTCTQTTEVYEMVTEMCIKLREAGYTPNTSAVLLNVEEEEKEFALSYHSEKLAM 694
            F  GDK   +  E+Y M+ EM + L +AG+ P+TS VL  +EEE KE AL +HSEKLA+
Sbjct: 626 EFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 685

Query: 695 AFGLISMAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLG 754
           AFGLIS  PGT + IVKNLR+C +CH ATKL+SKIY R II RDR RFHHF +G CSC  
Sbjct: 686 AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCND 741

BLAST of Lsi06G007940 vs. NCBI nr
Match: gi|659125489|ref|XP_008462708.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Cucumis melo])

HSP 1 Score: 1385.9 bits (3586), Expect = 0.0e+00
Identity = 672/752 (89.36%), Postives = 702/752 (93.35%), Query Frame = 1

Query: 3   SGHSHLNLQHTQQIHAHFIKTQFHKPHPFFSQSHFTPEANYNLLISSYTNNQLPQASFRL 62
           SG+SHLNLQ T Q+HAHFIKTQFH PHPFFSQSHFTPEANYNLLISSYTNN LPQAS   
Sbjct: 15  SGYSHLNLQQTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLISSYTNNHLPQASLNC 74

Query: 63  YLHMRTTDPAAALDNFILPSLLKACAQASCGVWGRELHGFAVKNGFATDVFVCNALMNMY 122
           YLHMRT D AAALDNFILPSLLKACAQAS    GRELHGFA KNGFA+DVFVCNALMNMY
Sbjct: 75  YLHMRTNDAAAALDNFILPSLLKACAQASSADLGRELHGFAQKNGFASDVFVCNALMNMY 134

Query: 123 EKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEALRLVGEMHFVGVKLSGVALI 182
           EKCG LVSA LVFDKMPERDVVSWSTMLGCYVRSK+FGEALRLV EM FVGVKLSGVALI
Sbjct: 135 EKCGCLVSASLVFDKMPERDVVSWSTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALI 194

Query: 183 SVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTALINMYCKGECLESAQRLFDSLS 242
           S+IGVFG LLDMKSGRAVHGYI+RNVGD KMEV LTTALI+MYCK ECL SAQRLFD LS
Sbjct: 195 SLIGVFGNLLDMKSGRAVHGYIMRNVGDEKMEVSLTTALIDMYCKCECLASAQRLFDRLS 254

Query: 243 QRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNEITLLSLITACGFVRTLDLGKC 302
           +RSVVSWT MI GCI +CRLVEGAKNFNRMLEEK+FPNEITLLSLIT CGFV+TLDLGK 
Sbjct: 255 KRSVVSWTVMIKGCIRSCRLVEGAKNFNRMLEEKLFPNEITLLSLITECGFVKTLDLGKW 314

Query: 303 LHAYLLRNGFGMSLALATALIDMYGKCGQVGYARALFNGVEEKDVKIWSAMISTYAYVSC 362
            HAYLLRNGFGMSLAL TALIDMYGKCGQVGYARALFNGVE+KDVKIWSA+IS YA+VSC
Sbjct: 315 FHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVEKKDVKIWSALISAYAHVSC 374

Query: 363 IDQAFGLFLEMLDNEVKPNKVTMVSLLSSCAEVGALDLGKWTHAYIRRHDLEVDVILETA 422
           +DQ F LFLEMLDNEVKPNKVTMVSLLS CAE G LDLGKWTHAYI RH LEVDVILETA
Sbjct: 375 MDQVFNLFLEMLDNEVKPNKVTMVSLLSLCAEAGTLDLGKWTHAYINRHGLEVDVILETA 434

Query: 423 LINMYAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSMHGCGTEALELFSEMESHGVKPN 482
           LINMY KCGD+TIARSLFDEAT+RDIHMWNAMMAGFSMHGCG EALELFSEMESHGV+PN
Sbjct: 435 LINMYVKCGDVTIARSLFDEATQRDIHMWNAMMAGFSMHGCGKEALELFSEMESHGVEPN 494

Query: 483 DITFISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIEHYGCLVDLLGRAGRLDEAHDII 542
           DITFISIFHACSHSGLV +GKKHFNRMVH+FGIVPK+EHYGCLVDLLGRAG L+EAH+II
Sbjct: 495 DITFISIFHACSHSGLVVEGKKHFNRMVHNFGIVPKMEHYGCLVDLLGRAGHLEEAHNII 554

Query: 543 ENMPMRPNTITWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWN 602
           ENMPMRPNTI WGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWN
Sbjct: 555 ENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWN 614

Query: 603 DVTSVRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTCTQTTEVYEMVTEMCIKLREAG 662
           DVTSVRETM+HLGMKKEPGLSWIEVNGS+HHFKSGDKTCTQTT+VYEMV EMCIKLREAG
Sbjct: 615 DVTSVRETMSHLGMKKEPGLSWIEVNGSVHHFKSGDKTCTQTTKVYEMVAEMCIKLREAG 674

Query: 663 YTPNTSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMAPGTPIRIVKNLRICDDCHAATK 722
           YTPNT+ VLLN++EEEKE ALSYHSEKLAMAFGLIS APGTPIRI+KNLRICDDCHAA K
Sbjct: 675 YTPNTAEVLLNIDEEEKESALSYHSEKLAMAFGLISTAPGTPIRIIKNLRICDDCHAAMK 734

Query: 723 LLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 755
           LLSKIY RTIIVRDRNRFHHFSEGYCSCLGYW
Sbjct: 735 LLSKIYARTIIVRDRNRFHHFSEGYCSCLGYW 766

BLAST of Lsi06G007940 vs. NCBI nr
Match: gi|778664358|ref|XP_011660280.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 1364.4 bits (3530), Expect = 0.0e+00
Identity = 661/752 (87.90%), Postives = 700/752 (93.09%), Query Frame = 1

Query: 3   SGHSHLNLQHTQQIHAHFIKTQFHKPHPFFSQSHFTPEANYNLLISSYTNNQLPQASFRL 62
           SGHSHLNLQ T Q+HAHFIKTQFH PHPFFSQSHFTPEANYNLLISSYTNN LPQASF  
Sbjct: 15  SGHSHLNLQQTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLISSYTNNHLPQASFNC 74

Query: 63  YLHMRTTDPAAALDNFILPSLLKACAQASCGVWGRELHGFAVKNGFATDVFVCNALMNMY 122
           YLHMR+ D AAALDNFILPSLLKACAQAS G  GRELHGFA KNGFA+DVFVCNALMNMY
Sbjct: 75  YLHMRSND-AAALDNFILPSLLKACAQASSGDLGRELHGFAQKNGFASDVFVCNALMNMY 134

Query: 123 EKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEALRLVGEMHFVGVKLSGVALI 182
           EKCG LVSARLVFD+MPERDVVSW+TMLGCYVRSK+FGEALRLV EM FVGVKLSGVALI
Sbjct: 135 EKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLVREMQFVGVKLSGVALI 194

Query: 183 SVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTALINMYCKGECLESAQRLFDSLS 242
           S+I VFG LLDMKSGRAVHGYIVRNVGD KMEV +TTALI+MYCKG CL SAQRLFD LS
Sbjct: 195 SLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYCKGGCLASAQRLFDRLS 254

Query: 243 QRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNEITLLSLITACGFVRTLDLGKC 302
           +RSVVSWT MIAGCI +CRL EGAKNFNRMLEEK+FPNEITLLSLIT CGFV TLDLGK 
Sbjct: 255 KRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLSLITECGFVGTLDLGKW 314

Query: 303 LHAYLLRNGFGMSLALATALIDMYGKCGQVGYARALFNGVEEKDVKIWSAMISTYAYVSC 362
            HAYLLRNGFGMSLAL TALIDMYGKCGQVGYARALFNGV++KDVKIWS +IS YA+VSC
Sbjct: 315 FHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKDVKIWSVLISAYAHVSC 374

Query: 363 IDQAFGLFLEMLDNEVKPNKVTMVSLLSSCAEVGALDLGKWTHAYIRRHDLEVDVILETA 422
           +DQ F LF+EML+N+VKPN VTMVSLLS CAE GALDLGKWTHAYI RH LEVDVILETA
Sbjct: 375 MDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETA 434

Query: 423 LINMYAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSMHGCGTEALELFSEMESHGVKPN 482
           LINMYAKCGD+TIARSLF+EA +RDI MWN MMAGFSMHGCG EALELFSEMESHGV+PN
Sbjct: 435 LINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPN 494

Query: 483 DITFISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIEHYGCLVDLLGRAGRLDEAHDII 542
           DITF+SIFHACSHSGLV +GKK+FN+MVHDFGIVPK+EHYGCLVDLLGRAG LDEAH+II
Sbjct: 495 DITFVSIFHACSHSGLVVEGKKYFNKMVHDFGIVPKMEHYGCLVDLLGRAGHLDEAHNII 554

Query: 543 ENMPMRPNTITWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWN 602
           ENMPMRPNTI WGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWN
Sbjct: 555 ENMPMRPNTIIWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWN 614

Query: 603 DVTSVRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTCTQTTEVYEMVTEMCIKLREAG 662
           DVTSVRE M+H GMKKEPGLSWIEV+GS+HHFKSGDK CTQTT+VYEMVTEMCIKLRE+G
Sbjct: 615 DVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKSGDKACTQTTKVYEMVTEMCIKLRESG 674

Query: 663 YTPNTSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMAPGTPIRIVKNLRICDDCHAATK 722
           YTPNT+AVLLN++EEEKE ALSYHSEKLA AFGLIS APGTPIRIVKNLRICDDCHAATK
Sbjct: 675 YTPNTAAVLLNIDEEEKESALSYHSEKLATAFGLISTAPGTPIRIVKNLRICDDCHAATK 734

Query: 723 LLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 755
           LLSKIYGRTIIVRDRNRFHHFSEGYCSC+GYW
Sbjct: 735 LLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 765

BLAST of Lsi06G007940 vs. NCBI nr
Match: gi|1009117535|ref|XP_015875369.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Ziziphus jujuba])

HSP 1 Score: 983.0 bits (2540), Expect = 2.9e-283
Identity = 474/757 (62.62%), Postives = 595/757 (78.60%), Query Frame = 1

Query: 5   HSH-LNLQHTQQIHAHFIKTQFHKPH------PFFSQSHFTPEANYNLLISSYTNNQLPQ 64
           H H  ++QHTQQIHAH IKT F   H      PF S  H +P A YN LI+SY  N  P+
Sbjct: 54  HDHPTSIQHTQQIHAHMIKTHFDNNHQNVPLTPFLS--HLSPAAQYNFLITSYNKNNFPE 113

Query: 65  ASFRLYLHMRTTDPAAALDNFILPSLLKACAQASCGVWGRELHGFAVKNGFATDVFVCNA 124
           +S ++Y H+R  D    +DNF +PS+LKAC Q S  V G+E+HGF +KNG   DVFV N+
Sbjct: 114 SSLQIYAHLRRID--FQVDNFTIPSVLKACGQCSWVVLGKEIHGFVLKNGLDGDVFVHNS 173

Query: 125 LMNMYEKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEALRLVGEMHFVGVKLS 184
           LM MY +CGS+VSARLVFD M ERD VSWSTM+  YVR++   EAL +V EMH + VK S
Sbjct: 174 LMQMYSECGSVVSARLVFDLMAERDSVSWSTMIRSYVRNRLLTEALEVVREMHIMHVKPS 233

Query: 185 GVALISVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTALINMYCKGECLESAQRL 244
            VA++S++ +F +L D ++G+A+HGY++RN    ++ +P+TTALI+M+ K   L SA+RL
Sbjct: 234 EVAMLSMVSLFSDLADTRTGKAMHGYVIRNSNYDRLRIPITTALIDMHAKCGNLSSAKRL 293

Query: 245 FDSLSQRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNEITLLSLITACGFVRTL 304
           F+ L Q++VVSWT+MIAGCI   +L EG K FN+MLE +IFPNEIT+ SLI  CGFVR L
Sbjct: 294 FNGLPQKNVVSWTAMIAGCIRCNKLEEGTKLFNKMLEGRIFPNEITVFSLIIECGFVRAL 353

Query: 305 DLGKCLHAYLLRNGFGMSLALATALIDMYGKCGQVGYARALFNGVEEKDVKIWSAMISTY 364
           +LGK LH+Y LRNGF M+L+LATAL+DMYGKCG    AR++F+G + KDV IWSAMIS Y
Sbjct: 354 ELGKWLHSYTLRNGFVMTLSLATALVDMYGKCGDTRSARSIFDGWDNKDVMIWSAMISAY 413

Query: 365 AYVSCIDQAFGLFLEMLDNEVKPNKVTMVSLLSSCAEVGALDLGKWTHAYIRRHDLEVDV 424
           A  +C ++A  LF +M+D  VKPN+VTMVSL+S CAEVGALDLGKW H YI +  ++VD+
Sbjct: 414 AQANCTNEASDLFAQMVDRGVKPNQVTMVSLISLCAEVGALDLGKWIHLYINQQGVDVDL 473

Query: 425 ILETALINMYAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSMHGCGTEALELFSEMESH 484
           IL+T+L++MYAKCGD+  +  LF EA  RDI +WNAM+ GFSMHG G EALELF EME  
Sbjct: 474 ILKTSLVDMYAKCGDIDGSYRLFSEAKDRDICLWNAMITGFSMHGFGKEALELFEEMERL 533

Query: 485 GVKPNDITFISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIEHYGCLVDLLGRAGRLDE 544
           GV+PNDITFI +FHACSH+GLVA+GK+ F+RMV  +G+VPKIEHYGC+VDLLGRAGRL+E
Sbjct: 534 GVEPNDITFIGVFHACSHAGLVAEGKRLFDRMVGSYGLVPKIEHYGCMVDLLGRAGRLEE 593

Query: 545 AHDIIENMPMRPNTITWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYAS 604
           AH+ I+ MPM+PNTI WGALL+AC+L+K+  LGEVAA+++LEL+PQNCGY++L SNIYA+
Sbjct: 594 AHEFIKTMPMQPNTIIWGALLSACRLYKHPDLGEVAAKELLELEPQNCGYNILMSNIYAA 653

Query: 605 AKRWNDVTSVRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTCTQTTEVYEMVTEMCIK 664
           A RWNDV  VR+TM   G+KK+PGLS IEVNGS+H F +GD+   QT ++YEM+ EM +K
Sbjct: 654 ANRWNDVAGVRKTMKDKGIKKQPGLSSIEVNGSVHDFVTGDRAHPQTGKIYEMLAEMTMK 713

Query: 665 LREAGYTPNTSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMAPGTPIRIVKNLRICDDC 724
           L+EAGYTP+TS VL N++EEEKE +L+YHSEKLAMAFGLI  A GTPIRIVKNLR+CDDC
Sbjct: 714 LKEAGYTPDTSVVLQNIDEEEKETSLNYHSEKLAMAFGLIHTAAGTPIRIVKNLRVCDDC 773

Query: 725 HAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 755
           H+ATKLLSKIYGR I+VRDRNRFHHF EG CSC  YW
Sbjct: 774 HSATKLLSKIYGRVIVVRDRNRFHHFREGSCSCGDYW 806

BLAST of Lsi06G007940 vs. NCBI nr
Match: gi|645222752|ref|XP_008218306.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g26782, mitochondrial-like [Prunus mume])

HSP 1 Score: 971.5 bits (2510), Expect = 8.7e-280
Identity = 466/753 (61.89%), Postives = 587/753 (77.95%), Query Frame = 1

Query: 5   HSHLNLQHTQQIHAHFIKTQFHKPHPF---FSQSHFTPEANYNLLISSYTNNQLPQASFR 64
           H H N + TQQIHAH IKTQF           Q+H +P A YN LI+SY  N  P+ + +
Sbjct: 52  HEHPNFEQTQQIHAHLIKTQFDHTIQIPLRHLQTHLSPAAQYNFLITSYIKNDCPKIALK 111

Query: 65  LYLHMRTTDPAAALDNFILPSLLKACAQASCGVWGRELHGFAVKNGFATDVFVCNALMNM 124
           LY  MR  D    +D+F +PS+LKAC Q+S  V G+E HGFA+KNG  +DVFV NAL+ M
Sbjct: 112 LYAQMRRMD--TQVDSFTIPSVLKACGQSSLAVLGKETHGFALKNGLDSDVFVSNALIQM 171

Query: 125 YEKCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEALRLVGEMHFVGVKLSGVAL 184
           Y +CG++V ARL+FD+M ERDVVSWSTM+  YVR++ F EAL L+ EMH + VK S +++
Sbjct: 172 YSECGNVVFARLLFDQMAERDVVSWSTMIRSYVRNRLFREALELIREMHCMQVKPSEISM 231

Query: 185 ISVIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTALINMYCKGECLESAQRLFDSL 244
           +S++ +F ++ D++ G+A+H Y+VRN  + K+ V ++TALI+MY K   L  A+R+FD L
Sbjct: 232 VSMVNLFADVADIEMGKAMHAYVVRNGTNEKLGVSISTALIDMYVKCGNLAYARRVFDGL 291

Query: 245 SQRSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNEITLLSLITACGFVRTLDLGK 304
           +Q+++VSWT+MIAG IH   L EGAK FNRML E+ +PNEIT+LSL+   G V  L+LGK
Sbjct: 292 AQKNIVSWTAMIAGYIHCRNLQEGAKLFNRMLVERNYPNEITMLSLVIESGSVGALELGK 351

Query: 305 CLHAYLLRNGFGMSLALATALIDMYGKCGQVGYARALFNGVEEKDVKIWSAMISTYAYVS 364
            LHAY+LRNGF MSLALATAL+DMYGKC ++ YARALF+ V+ KDV IWSA+IS YA+ +
Sbjct: 352 WLHAYILRNGFIMSLALATALVDMYGKCKEITYARALFDSVDNKDVMIWSALISAYAHAN 411

Query: 365 CIDQAFGLFLEMLDNEVKPNKVTMVSLLSSCAEVGALDLGKWTHAYIRRHDLEVDVILET 424
           C +QA  LF +M D+ V+PN+VTMVSL+S CAEVGALDLGKW H+YI +  +EVDVIL T
Sbjct: 412 CTNQASDLFAQMKDSGVRPNQVTMVSLISLCAEVGALDLGKWVHSYINQQRMEVDVILRT 471

Query: 425 ALINMYAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSMHGCGTEALELFSEMESHGVKP 484
           AL++MYAKCGD+ +A  LF EA+ RD  MWNAMM GF+MHGCG +ALELF +M+  GV+ 
Sbjct: 472 ALVDMYAKCGDIDMALMLFSEASNRDSCMWNAMMTGFAMHGCGKQALELFEQMDRQGVEL 531

Query: 485 NDITFISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIEHYGCLVDLLGRAGRLDEAHDI 544
           NDITFI + HACSH+GLVADGK  F +MVH +G+ PK+EHYGC+VDLLGRAG LDEAH +
Sbjct: 532 NDITFIGVLHACSHAGLVADGKWLFEKMVHVYGLAPKVEHYGCMVDLLGRAGNLDEAHKL 591

Query: 545 IENMPMRPNTITWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRW 604
           I++MPM+PNTI WGALLAACK+HKN  L EVAAR++LEL+PQNCGY++L SNIYA++ RW
Sbjct: 592 IKSMPMQPNTIVWGALLAACKIHKNPNLAEVAARELLELEPQNCGYNILMSNIYAASNRW 651

Query: 605 NDVTSVRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTCTQTTEVYEMVTEMCIKLREA 664
           N+V  VR++M   G KKEPGLS IEVNGS+H F  GDK   QT ++YEM+ EM  KL+EA
Sbjct: 652 NEVDGVRKSMKDRGTKKEPGLSSIEVNGSVHDFIMGDKAHPQTRKIYEMLAEMTKKLKEA 711

Query: 665 GYTPNTSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMAPGTPIRIVKNLRICDDCHAAT 724
           GYTPNTS VL N++EEEKE  ++YHSE+LAMAFGLIS A G PIRIVKNLR+C+DCH AT
Sbjct: 712 GYTPNTSVVLQNIDEEEKETVVNYHSERLAMAFGLISSAAGMPIRIVKNLRVCEDCHTAT 771

Query: 725 KLLSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 755
           KLLSKIYGR +IVRDRNRFHHF +GYCSC  YW
Sbjct: 772 KLLSKIYGRVMIVRDRNRFHHFRDGYCSCGDYW 802

BLAST of Lsi06G007940 vs. NCBI nr
Match: gi|764596074|ref|XP_004304765.2| (PREDICTED: pentatricopeptide repeat-containing protein At2g01510, mitochondrial-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 963.0 bits (2488), Expect = 3.1e-277
Identity = 469/751 (62.45%), Postives = 577/751 (76.83%), Query Frame = 1

Query: 9   NLQHTQQIHAHFIKTQFHKP-----HPFFSQSHFTPEANYNLLISSYTNNQLPQASFRLY 68
           +L+ TQQ+HAH IKTQF        +P   Q+H +P A YN LI+SY  N  P  + +LY
Sbjct: 56  SLEQTQQLHAHMIKTQFDHTLQIPLNPL--QTHISPSAQYNFLITSYIKNNHPNIALKLY 115

Query: 69  LHMRTTDPAAALDNFILPSLLKACAQASCGVWGRELHGFAVKNGFATDVFVCNALMNMYE 128
             MR       +D+F +PS+LKAC Q+S  + GRE+HGFA+K G   D FVCNAL+ MY 
Sbjct: 116 TQMRRM--GTQVDHFTIPSVLKACGQSSVEMLGREIHGFALKGGLDCDAFVCNALIKMYG 175

Query: 129 KCGSLVSARLVFDKMPERDVVSWSTMLGCYVRSKSFGEALRLVGEMHFVGVKLSGVALIS 188
           +CG L  ARLVFD M ERDVVSWSTM+  YVR++ FGEAL ++ EMHF+ VK S VA+IS
Sbjct: 176 ECGRLELARLVFDVMCERDVVSWSTMINGYVRNRGFGEALEVIREMHFLQVKPSEVAMIS 235

Query: 189 VIGVFGELLDMKSGRAVHGYIVRNVGDVKMEVPLTTALINMYCKGECLESAQRLFDSLSQ 248
           +IG+F ++ D+K  +A+H Y+VRN  + K+ VP+TTAL++MY K   L  A+RLFD L++
Sbjct: 236 MIGLFADIADVKMAKAMHCYVVRNSANEKLVVPVTTALVDMYVKCGNLGYARRLFDGLAE 295

Query: 249 RSVVSWTSMIAGCIHNCRLVEGAKNFNRMLEEKIFPNEITLLSLITACGFVRTLDLGKCL 308
           +SVVSWT+MIAGCI    + EG K F RMLEE+ FPNEIT+LSLI   G V  L+LGK L
Sbjct: 296 KSVVSWTTMIAGCIRCNEVEEGVKLFKRMLEERKFPNEITVLSLIIESGNVGALELGKWL 355

Query: 309 HAYLLRNGFGMSLALATALIDMYGKCGQVGYARALFNGVEEKDVKIWSAMISTYAYVSCI 368
           HAY+LRNGF MSLALATAL+DMYGKCG+  YARA+F+ +EEKDV IWSAMIS Y+  +  
Sbjct: 356 HAYVLRNGFVMSLALATALVDMYGKCGEAEYARAVFDSIEEKDVMIWSAMISAYSRANQT 415

Query: 369 DQAFGLFLEMLDNEVKPNKVTMVSLLSSCAEVGALDLGKWTHAYIRRHDLEVDVILETAL 428
           +QA  LF  M D+ V+PN+VTMVSL+S C EVGALDLGKW H+YI +  ++VDVIL TAL
Sbjct: 416 NQASELFARMKDSGVRPNQVTMVSLISLCGEVGALDLGKWVHSYINQQRIDVDVILRTAL 475

Query: 429 INMYAKCGDLTIARSLFDEATRRDIHMWNAMMAGFSMHGCGTEALELFSEMESHGVKPND 488
           ++MYAKCG++ +A  LF EA  RD  MWN M+ G +MHGCG +ALELF EM+  GVKPND
Sbjct: 476 VDMYAKCGEIDVALRLFSEAINRDSQMWNVMITGLAMHGCGKQALELFEEMQRQGVKPND 535

Query: 489 ITFISIFHACSHSGLVADGKKHFNRMVHDFGIVPKIEHYGCLVDLLGRAGRLDEAHDIIE 548
           ITFI + HACSH+GLVADGKK F +MVHDF + PK+EHYGC+VDLLGRAG+LDEAH +I+
Sbjct: 536 ITFIGLLHACSHAGLVADGKKIFEKMVHDFSLAPKVEHYGCMVDLLGRAGKLDEAHKLIK 595

Query: 549 NMPMRPNTITWGALLAACKLHKNLALGEVAARKILELDPQNCGYSVLKSNIYASAKRWND 608
           +MP+ PNTI WG+LLAACK HK+  L EVAAR++L+L+PQNCGY+VL SNIYA++ +W D
Sbjct: 596 SMPLEPNTIVWGSLLAACKTHKSPNLAEVAARQLLKLEPQNCGYNVLMSNIYAASNKWVD 655

Query: 609 VTSVRETMNHLGMKKEPGLSWIEVNGSIHHFKSGDKTCTQTTEVYEMVTEMCIKLREAGY 668
           V  VR+ M   G KKEPGLS IEVNG++H F  GDKT  QT ++YEM+ EM  KL+EAGY
Sbjct: 656 VAGVRKAMKDQGTKKEPGLSSIEVNGAVHDFMMGDKTHPQTRKIYEMLAEMNKKLKEAGY 715

Query: 669 TPNTSAVLLNVEEEEKEFALSYHSEKLAMAFGLISMAPGTPIRIVKNLRICDDCHAATKL 728
           TPNTS VL N++EEEKE AL+YHSEKLAMAFGLIS A  TPIRIVKNLR+CDDCH ATKL
Sbjct: 716 TPNTSVVLQNIDEEEKETALNYHSEKLAMAFGLISTAACTPIRIVKNLRVCDDCHTATKL 775

Query: 729 LSKIYGRTIIVRDRNRFHHFSEGYCSCLGYW 755
           LSKIY R +IVRDRNRFHHF +G CSC  YW
Sbjct: 776 LSKIYSRVMIVRDRNRFHHFIDGSCSCGDYW 802

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PPR32_ARATH1.9e-15739.75Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
PP249_ARATH5.6e-15439.33Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana GN... [more]
PP320_ARATH2.9e-15038.15Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... [more]
PP341_ARATH2.7e-14837.54Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana GN... [more]
PPR21_ARATH1.1e-14643.19Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0LYC2_CUCSA0.0e+0087.90Uncharacterized protein OS=Cucumis sativus GN=Csa_1G690260 PE=4 SV=1[more]
W9RT88_9ROSA2.8e-27761.09Uncharacterized protein OS=Morus notabilis GN=L484_024533 PE=4 SV=1[more]
A0A061F229_THECC2.8e-26961.50Tetratricopeptide repeat-like superfamily protein, putative OS=Theobroma cacao G... [more]
F6HVH9_VITVI4.5e-26760.53Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0081g00690 PE=4 SV=... [more]
A0A067JW20_JATCU4.5e-26759.34Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23532 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G11290.11.1e-15839.75 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G22690.13.5e-15439.41 Protein of unknown function DUF1685 (InterPro:IPR012881), Pentatrico... [more]
AT4G18750.11.6e-15138.15 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G30700.11.5e-14937.54 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G08070.16.4e-14843.19 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659125489|ref|XP_008462708.1|0.0e+0089.36PREDICTED: pentatricopeptide repeat-containing protein At3g26782, mitochondrial-... [more]
gi|778664358|ref|XP_011660280.1|0.0e+0087.90PREDICTED: pentatricopeptide repeat-containing protein At3g26782, mitochondrial-... [more]
gi|1009117535|ref|XP_015875369.1|2.9e-28362.62PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Ziziphus ... [more]
gi|645222752|ref|XP_008218306.1|8.7e-28061.89PREDICTED: pentatricopeptide repeat-containing protein At3g26782, mitochondrial-... [more]
gi|764596074|ref|XP_004304765.2|3.1e-27762.45PREDICTED: pentatricopeptide repeat-containing protein At2g01510, mitochondrial-... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G007940.1Lsi06G007940.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 247..276
score: 0.099coord: 114..142
score: 0.0059coord: 144..170
score: 6.3E-4coord: 521..546
score: 0.038coord: 219..244
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 447..494
score: 1.7E-11coord: 345..393
score: 3.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 349..381
score: 6.7E-4coord: 114..144
score: 0.0017coord: 247..281
score: 2.2E-4coord: 144..176
score: 1.1E-5coord: 450..482
score: 4.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 280..314
score: 5.546coord: 315..345
score: 6.336coord: 214..244
score: 6.643coord: 245..279
score: 9.032coord: 111..141
score: 8.703coord: 142..176
score: 10.26coord: 346..380
score: 9.69coord: 482..517
score: 7.52coord: 381..415
score: 6.445coord: 39..73
score: 6.467coord: 518..548
score: 7.805coord: 416..446
score: 7.596coord: 447..481
score: 12
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 548..603
score: 9.5E-4coord: 343..480
score: 9.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 316..625
score: 2.1E-291coord: 43..280
score: 2.1E