Lsi06G007640 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G007640
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Carboxyl-terminal peptidase
Location	chr06 : 14587050 .. 14587403 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTTGGGGACAACACACTGGTTGGGTATTGGCCAGCAGAGCTATTTACTCACTTAGCCGACCACGCCACAATGGTGGAGTGGGGTGGGGAAGTGGTAAACTCTAGGGCCAATGGACAGCACACTTCAACCCAAATGGGCTCCGGCCACTTCCCCGATGACGGCTTTGGCAAAGCCAGCTACTTTCGAAACCTCGAGATCGTTGACACCGACAACAGCCTCAGCGCCGTTCAAGATATCTCAATCATGGCTGAAAACACCAACTGCTATAATATTATGAGCTCTTATAATGACCAATGGGGCACTCACTTCTACTATGGTGGTCCTGGTAAAAATCCTAAATGCCAATGA

mRNA sequence

ATGGGATTTGGGGACAACACACTGGTTGGGTATTGGCCAGCAGAGCTATTTACTCACTTAGCCGACCACGCCACAATGGTGGAGTGGGGTGGGGAAGTGGTAAACTCTAGGGCCAATGGACAGCACACTTCAACCCAAATGGGCTCCGGCCACTTCCCCGATGACGGCTTTGGCAAAGCCAGCTACTTTCGAAACCTCGAGATCGTTGACACCGACAACAGCCTCAGCGCCGTTCAAGATATCTCAATCATGGCTGAAAACACCAACTGCTATAATATTATGAGCTCTTATAATGACCAATGGGGCACTCACTTCTACTATGGTGGTCCTGGTAAAAATCCTAAATGCCAATGA

Coding sequence (CDS)

ATGGGATTTGGGGACAACACACTGGTTGGGTATTGGCCAGCAGAGCTATTTACTCACTTAGCCGACCACGCCACAATGGTGGAGTGGGGTGGGGAAGTGGTAAACTCTAGGGCCAATGGACAGCACACTTCAACCCAAATGGGCTCCGGCCACTTCCCCGATGACGGCTTTGGCAAAGCCAGCTACTTTCGAAACCTCGAGATCGTTGACACCGACAACAGCCTCAGCGCCGTTCAAGATATCTCAATCATGGCTGAAAACACCAACTGCTATAATATTATGAGCTCTTATAATGACCAATGGGGCACTCACTTCTACTATGGTGGTCCTGGTAAAAATCCTAAATGCCAATGA

Protein sequence

MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKASYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKCQ

Homology

[Close]

BLAST of Lsi06G007640 vs. TrEMBL
Match: A0A0A0LXY9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665910 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 4.6e-62
Identity = 111/117 (94.87%), Postives = 115/117 (98.29%), Query Frame = 1


Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFG+NTLVGYWPAELFTHLADHATMVEWGGEVVNSR NGQHTSTQMGSGHFPDDGF KA
Sbjct: 323 MGFGENTLVGYWPAELFTHLADHATMVEWGGEVVNSRINGQHTSTQMGSGHFPDDGFAKA 382

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKCQ 118
           SYFRNLEIVD+DNSLS+VQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPG+NPKCQ
Sbjct: 383 SYFRNLEIVDSDNSLSSVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGRNPKCQ 439

[Close]

BLAST of Lsi06G007640 vs. TrEMBL
Match: V4VTM3_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v100209352mg PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 4.5e-57
Identity = 101/116 (87.07%), Postives = 113/116 (97.41%), Query Frame = 1


Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFG+N LVGYWPAELFTHLADHATMVEWGGEVVNSRANG+HTSTQMGSGHF +DGFGKA
Sbjct: 226 MGFGENLLVGYWPAELFTHLADHATMVEWGGEVVNSRANGEHTSTQMGSGHFAEDGFGKA 285

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           SYFRNLEIVD+DNSLS+V+DISI+AENTNCYNI +SYN++WGTHFYYGGPG+NP+C
Sbjct: 286 SYFRNLEIVDSDNSLSSVRDISILAENTNCYNIKNSYNNEWGTHFYYGGPGRNPQC 341

[Close]

BLAST of Lsi06G007640 vs. TrEMBL
Match: A0A067EBN4_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0136582mg PE=4 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 4.5e-57
Identity = 101/116 (87.07%), Postives = 113/116 (97.41%), Query Frame = 1


Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFG+N LVGYWPAELFTHLADHATMVEWGGEVVNSRANG+HTSTQMGSGHF +DGFGKA
Sbjct: 58  MGFGENLLVGYWPAELFTHLADHATMVEWGGEVVNSRANGEHTSTQMGSGHFAEDGFGKA 117

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           SYFRNLEIVD+DNSLS+V+DISI+AENTNCYNI +SYN++WGTHFYYGGPG+NP+C
Sbjct: 118 SYFRNLEIVDSDNSLSSVRDISILAENTNCYNIKNSYNNEWGTHFYYGGPGRNPQC 173

[Close]

BLAST of Lsi06G007640 vs. TrEMBL
Match: B9S7P7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0610400 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 5.9e-57
Identity = 102/116 (87.93%), Postives = 111/116 (95.69%), Query Frame = 1


Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANG HTSTQMGSGHF +DGFGKA
Sbjct: 323 MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGAHTSTQMGSGHFAEDGFGKA 382

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           SYFRNLEIVD+DNSL++ QDISI+AENTNCYNI SSYN++WGT+FYYGGPG NP+C
Sbjct: 383 SYFRNLEIVDSDNSLTSAQDISILAENTNCYNIKSSYNNEWGTYFYYGGPGNNPQC 438

[Close]

BLAST of Lsi06G007640 vs. TrEMBL
Match: A0A061F0F2_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_026123 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.7e-56
Identity = 101/116 (87.07%), Postives = 110/116 (94.83%), Query Frame = 1


Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHF ++GFGK+
Sbjct: 227 MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFAEEGFGKS 286

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           SYFRNLEIVD DNSLS+V DIS +AENTNCYNI SSYN++WGT+FYYGGPG NP+C
Sbjct: 287 SYFRNLEIVDADNSLSSVHDISTLAENTNCYNIKSSYNNEWGTYFYYGGPGNNPRC 342

[Close]

BLAST of Lsi06G007640 vs. TAIR10
Match: AT5G18460.1 (AT5G18460.1 Protein of Unknown Function (DUF239))

HSP 1 Score: 209.5 bits (532), Expect = 1.1e-54
Identity = 91/116 (78.45%), Postives = 107/116 (92.24%), Query Frame = 1


Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MG GD+TLVGYWPAELFTHLADHAT VEWGGEVVN+RA+G+HT+TQMGSGHFPD+GFGKA
Sbjct: 314 MGLGDSTLVGYWPAELFTHLADHATTVEWGGEVVNTRASGRHTTTQMGSGHFPDEGFGKA 373

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           SYFRNLE+VD+DNSL  V D+ I+AENT CY+I SSY+++WGT+FYYGGPG NP+C
Sbjct: 374 SYFRNLEVVDSDNSLVPVHDVKILAENTECYDIKSSYSNEWGTYFYYGGPGFNPRC 429

[Close]

BLAST of Lsi06G007640 vs. TAIR10
Match: AT1G23340.1 (AT1G23340.1 Protein of Unknown Function (DUF239))

HSP 1 Score: 164.9 bits (416), Expect = 3.1e-41
Identity = 70/114 (61.40%), Postives = 87/114 (76.32%), Query Frame = 1


Query: 3   FGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKASY 62
           FG  TLVGYWP  LFTHL +H  MV++GGE+VN+R  G HTSTQMGSGHF  +GFGKASY
Sbjct: 295 FGSGTLVGYWPVSLFTHLREHGNMVQFGGEIVNTRPGGSHTSTQMGSGHFAGEGFGKASY 354

Query: 63  FRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           FRNL++VD DN+L  + ++ ++A++ NCY+I    N  WG  FYYGGPGKN KC
Sbjct: 355 FRNLQMVDWDNTLIPISNLKVLADHPNCYDIRGGVNRVWGNFFYYGGPGKNSKC 408

[Close]

BLAST of Lsi06G007640 vs. TAIR10
Match: AT1G70550.1 (AT1G70550.1 Protein of Unknown Function (DUF239))

HSP 1 Score: 164.9 bits (416), Expect = 3.1e-41
Identity = 71/114 (62.28%), Postives = 88/114 (77.19%), Query Frame = 1


Query: 3   FGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKASY 62
           FG   LVGYWPA LFTHL  H +MV++GGE+VN+R  G HT+TQMGSGHF  +GFGKASY
Sbjct: 351 FGSGALVGYWPAFLFTHLKQHGSMVQFGGEIVNNRPGGSHTTTQMGSGHFAGEGFGKASY 410

Query: 63  FRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           FRNL+IVD DN+L    ++ I+A++ NCY+I    N  WG +FYYGGPGKNP+C
Sbjct: 411 FRNLQIVDWDNTLIPASNLKILADHPNCYDIRGGTNRVWGNYFYYGGPGKNPRC 464

[Close]

BLAST of Lsi06G007640 vs. TAIR10
Match: AT1G55360.1 (AT1G55360.1 Protein of Unknown Function (DUF239))

HSP 1 Score: 161.8 bits (408), Expect = 2.6e-40
Identity = 67/116 (57.76%), Postives = 92/116 (79.31%), Query Frame = 1


Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           M FG+  ++GYWP+ LF++L + A+M+EWGGEVVNS+++GQHTSTQMGSG FP++GF KA
Sbjct: 306 MQFGNGYVLGYWPSFLFSYLTESASMIEWGGEVVNSQSDGQHTSTQMGSGKFPEEGFSKA 365

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           SYFRN+++VD  N+L A + +    E +NCY++ +  ND WG +FYYGGPGKN KC
Sbjct: 366 SYFRNIQVVDGSNNLKAPKGLGTFTEQSNCYDVQTGSNDDWGHYFYYGGPGKNQKC 421

[Close]

BLAST of Lsi06G007640 vs. TAIR10
Match: AT5G50150.1 (AT5G50150.1 Protein of Unknown Function (DUF239))

HSP 1 Score: 161.4 bits (407), Expect = 3.4e-40
Identity = 68/113 (60.18%), Postives = 93/113 (82.30%), Query Frame = 1


Query: 4   GDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKASYF 63
           G+  LVGYWPA LF+HL  HA+MV++GGEVVNSR++G HT TQMGSGHF D+GF KA+YF
Sbjct: 307 GNGLLVGYWPAFLFSHLRSHASMVQFGGEVVNSRSSGAHTGTQMGSGHFADEGFEKAAYF 366

Query: 64  RNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           RNL++VD DN+L  ++++ ++A++  CY+I    N+ WGT+FYYGGPG+NP+C
Sbjct: 367 RNLQVVDWDNNLLPLKNLHVLADHPACYDIRQGKNNVWGTYFYYGGPGRNPRC 419

[Close]

BLAST of Lsi06G007640 vs. NCBI nr
Match: gi|778664243|ref|XP_011660253.1| (PREDICTED: uncharacterized protein LOC101208882 [Cucumis sativus])

HSP 1 Score: 245.0 bits (624), Expect = 6.6e-62
Identity = 111/117 (94.87%), Postives = 115/117 (98.29%), Query Frame = 1


Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFG+NTLVGYWPAELFTHLADHATMVEWGGEVVNSR NGQHTSTQMGSGHFPDDGF KA
Sbjct: 323 MGFGENTLVGYWPAELFTHLADHATMVEWGGEVVNSRINGQHTSTQMGSGHFPDDGFAKA 382

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKCQ 118
           SYFRNLEIVD+DNSLS+VQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPG+NPKCQ
Sbjct: 383 SYFRNLEIVDSDNSLSSVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGRNPKCQ 439

[Close]

BLAST of Lsi06G007640 vs. NCBI nr
Match: gi|659086085|ref|XP_008443756.1| (PREDICTED: uncharacterized protein LOC103487273 [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 8.7e-62
Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 1


Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFG+NTLVGYWPAELFTHLADHATMVEWGGEVVNSR NGQHTSTQMGSGHFPDDGF KA
Sbjct: 321 MGFGENTLVGYWPAELFTHLADHATMVEWGGEVVNSRINGQHTSTQMGSGHFPDDGFAKA 380

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKCQ 118
           SYFRNLEIVD+DNSLS VQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPG+NPKCQ
Sbjct: 381 SYFRNLEIVDSDNSLSGVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGRNPKCQ 437

[Close]

BLAST of Lsi06G007640 vs. NCBI nr
Match: gi|641833475|gb|KDO52488.1| (hypothetical protein CISIN_1g0136582mg, partial [Citrus sinensis])

HSP 1 Score: 228.4 bits (581), Expect = 6.4e-57
Identity = 101/116 (87.07%), Postives = 113/116 (97.41%), Query Frame = 1


Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFG+N LVGYWPAELFTHLADHATMVEWGGEVVNSRANG+HTSTQMGSGHF +DGFGKA
Sbjct: 58  MGFGENLLVGYWPAELFTHLADHATMVEWGGEVVNSRANGEHTSTQMGSGHFAEDGFGKA 117

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           SYFRNLEIVD+DNSLS+V+DISI+AENTNCYNI +SYN++WGTHFYYGGPG+NP+C
Sbjct: 118 SYFRNLEIVDSDNSLSSVRDISILAENTNCYNIKNSYNNEWGTHFYYGGPGRNPQC 173

[Close]

BLAST of Lsi06G007640 vs. NCBI nr
Match: gi|568850550|ref|XP_006478975.1| (PREDICTED: uncharacterized protein LOC102628245 [Citrus sinensis])

HSP 1 Score: 228.4 bits (581), Expect = 6.4e-57
Identity = 101/116 (87.07%), Postives = 113/116 (97.41%), Query Frame = 1


Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFG+N LVGYWPAELFTHLADHATMVEWGGEVVNSRANG+HTSTQMGSGHF +DGFGKA
Sbjct: 322 MGFGENLLVGYWPAELFTHLADHATMVEWGGEVVNSRANGEHTSTQMGSGHFAEDGFGKA 381

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           SYFRNLEIVD+DNSLS+V+DISI+AENTNCYNI +SYN++WGTHFYYGGPG+NP+C
Sbjct: 382 SYFRNLEIVDSDNSLSSVRDISILAENTNCYNIKNSYNNEWGTHFYYGGPGRNPQC 437

[Close]

BLAST of Lsi06G007640 vs. NCBI nr
Match: gi|567901582|ref|XP_006443279.1| (hypothetical protein CICLE_v100209352mg, partial [Citrus clementina])

HSP 1 Score: 228.4 bits (581), Expect = 6.4e-57
Identity = 101/116 (87.07%), Postives = 113/116 (97.41%), Query Frame = 1


Query: 1   MGFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRANGQHTSTQMGSGHFPDDGFGKA 60
           MGFG+N LVGYWPAELFTHLADHATMVEWGGEVVNSRANG+HTSTQMGSGHF +DGFGKA
Sbjct: 226 MGFGENLLVGYWPAELFTHLADHATMVEWGGEVVNSRANGEHTSTQMGSGHFAEDGFGKA 285

Query: 61  SYFRNLEIVDTDNSLSAVQDISIMAENTNCYNIMSSYNDQWGTHFYYGGPGKNPKC 117
           SYFRNLEIVD+DNSLS+V+DISI+AENTNCYNI +SYN++WGTHFYYGGPG+NP+C
Sbjct: 286 SYFRNLEIVDSDNSLSSVRDISILAENTNCYNIKNSYNNEWGTHFYYGGPGRNPQC 341

The following BLAST results are available for this feature:

BLAST of Lsi06G007640 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi06G007640 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXY9_CUCSA	4.6e-62	94.87	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665910 PE=4 SV=1	[more]
V4VTM3_9ROSI	4.5e-57	87.07	Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v100209352mg PE...	[more]
A0A067EBN4_CITSI	4.5e-57	87.07	Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0136582mg PE=4 ...	[more]
B9S7P7_RICCO	5.9e-57	87.93	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0610400 PE=4 SV=1	[more]
A0A061F0F2_THECC	1.7e-56	87.07	Uncharacterized protein isoform 2 OS=Theobroma cacao GN=TCM_026123 PE=4 SV=1	[more]

BLAST of Lsi06G007640 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18460.1	1.1e-54	78.45	Protein of Unknown Function (DUF239)	[more]
AT1G23340.1	3.1e-41	61.40	Protein of Unknown Function (DUF239)	[more]
AT1G70550.1	3.1e-41	62.28	Protein of Unknown Function (DUF239)	[more]
AT1G55360.1	2.6e-40	57.76	Protein of Unknown Function (DUF239)	[more]
AT5G50150.1	3.4e-40	60.18	Protein of Unknown Function (DUF239)	[more]

BLAST of Lsi06G007640 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778664243\|ref\|XP_011660253.1\|	6.6e-62	94.87	PREDICTED: uncharacterized protein LOC101208882 [Cucumis sativus]	[more]
gi\|659086085\|ref\|XP_008443756.1\|	8.7e-62	94.87	PREDICTED: uncharacterized protein LOC103487273 [Cucumis melo]	[more]
gi\|641833475\|gb\|KDO52488.1\|	6.4e-57	87.07	hypothetical protein CISIN_1g0136582mg, partial [Citrus sinensis]	[more]
gi\|568850550\|ref\|XP_006478975.1\|	6.4e-57	87.07	PREDICTED: uncharacterized protein LOC102628245 [Citrus sinensis]	[more]
gi\|567901582\|ref\|XP_006443279.1\|	6.4e-57	87.07	hypothetical protein CICLE_v100209352mg, partial [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004314	Neprosin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G007640.1	Lsi06G007640.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004314	Domain of unknown function DUF239	PFAM	PF03080	DUF239	coord: 7..110 score: 2.2
None	No IPR available	PANTHER	PTHR31589	FAMILY NOT NAMED	coord: 1..116 score: 8.9
None	No IPR available	PANTHER	PTHR31589:SF4	SUBFAMILY NOT NAMED	coord: 1..116 score: 8.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G007640	MELO3C010125.2	Melon (DHL92) v3.6.1	lsimedB420
Lsi06G007640	Cla97C03G061880	Watermelon (97103) v2	lsiwmbB362
Lsi06G007640	Bhi02G001060	Wax gourd	lsiwgoB531
Lsi06G007640	CsGy1G031710	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G007640	CsaV3_1G045050	Cucumber (Chinese Long) v3	cuclsiB068

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G007640	Silver-seed gourd	carlsiB251
Lsi06G007640	Silver-seed gourd	carlsiB830
Lsi06G007640	Wax gourd	lsiwgoB521
Lsi06G007640	Cucumber (Gy14) v1	cgylsiB640
Lsi06G007640	Cucurbita maxima (Rimu)	cmalsiB078
Lsi06G007640	Cucurbita maxima (Rimu)	cmalsiB128
Lsi06G007640	Cucurbita moschata (Rifu)	cmolsiB064
Lsi06G007640	Cucurbita moschata (Rifu)	cmolsiB118
Lsi06G007640	Cucurbita pepo (Zucchini)	cpelsiB304
Lsi06G007640	Cucurbita pepo (Zucchini)	cpelsiB559
Lsi06G007640	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G007640	Cucumber (Chinese Long) v2	culsiB058
Lsi06G007640	Cucumber (Chinese Long) v2	culsiB081
Lsi06G007640	Melon (DHL92) v3.5.1	lsimeB398
Lsi06G007640	Watermelon (Charleston Gray)	lsiwcgB361
Lsi06G007640	Watermelon (97103) v1	lsiwmB391
Lsi06G007640	Watermelon (97103) v1	lsiwmB398