Lsi06G007520 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G007520
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionGag-pro-like protein
Locationchr06 : 13950359 .. 13953348 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAAAGTTGCCGCAAGTTTCCAGAGTGCCTTAAGTGAGCAGGCCGCATCATCCCAGAAGATCGTTGCGGAGGTTGAGAGTTTACAGAATTCAGCTGAAATATACAAATCCCAACTGACTAAGGCAGAACGCACAAACATGCTTCTTCAGGAGGCTGTTACAAGTGTTGAACACCAACTATCGATTTGTCGCAACGCGCGAGAGATGGTGACAGACGACTATGGCCAGTTGAAGAAAAAGTATCAAGAAATGTCAGAAGATTTTGCTAATGGAGAGACAGGTATAGCATATTGAGGCTGAATTATGACAGCGTCAGAGGACAGGTAGAGCAAGAAGCCGAGAATCTAAGACAGATGGCAAGGATGGCAGATCGGTTCGCATTACAGGCTATAACCCTCCGACAAGACATCATACCTACGCGGCCTTGCAGCAGCGAGTTGTCTCATTTTCTAGGGATCATAGGGCATTACCTAGGGCGTTTTGGGTGCTATCACTAGAACTTAGGGCATACACTTTGCATCATACTATTGTAGGATTTTCGCATTAAAATTATTCCTTAATGTATGTCATTTTGCATTCATATCTTTTTTTAATGAAAGTACTTTTCCTCTTTCTCTATCTCTCTCTATCTCTCTAACCAAACCATTATTTATTTCTCTTACAAATACAAAAAGGTTTAAAGTTAACAAAAATAGCTCGAAGTTCACCTCCTCACCACCCCTATTGGATGAGACGAAAGGCAAAAATCATGGATGATCAAGTGAATGCAGGTCCAGGCGGTACGTCAGGATGTAGAAGAGTTGAAGGAGCAATTGACGAAAATCTTGGAATTGCTCACTATCGGGAGAGGGAAAAATGTTGTTGGATCTTCGTCACAAGTAGAATTTGGTCTCAATCAGACTCTGGAAGATATGCCTACTTATCCCTCAGGGTTTACGCCTCAAACGATGCCAAGCCCGCACCTGGCGGGAGGGTCTTATCCTACATCATCTCCTGCACAAGATTCTACTCAGGCTTTGCCATAGACAAACCGTGTGAACGATCCAGTATCCACCCCAGTTATAGAGGGTGGTAGAAAGGTTCCAGAAGATCATAATAGCAAGAAAAGACTAAAGTTTTTAGAAGAAAGACTGCGGGCAATCGAAGGCGCGGACGTATATGGGGAGGTTGATGCTACACATTTATGCTTAATCTTAGATGTACCGATCCCTCCAAAGTTCAAGACTCCTGACTTCGAAAAATATAATGGGACCACATGCCCAAAAAGTCATCTAGTCATGTACCGTCGAAAGATGTCAGCATACGCTCACGATGATAATTTGTTGATCCACTATTTTCAGGATAGTTTGGTCGGCCCAGCCTCTCGTTGGTACATGCATTTGGACGGCTCCCAAGTGCATAAATGGAAAGATCTTGTCGATTCGTTCTTAAGGCAATACAAGTACAACATTGATATGGCACCAGACCGGTTGGACCTCCAACGAATGGGAAACGACCGTGCAAGTGCAACCCCCTCTAACTGATAGAGAATTGGCGGCCATGTTCATAAATACCCTCCGATCCCCATACTACGACAGAATGATTGGGAGCGCTTCAACCAATTTCTCAGACATTATAACGAGGAGAAAAGATTGAGTTTGGAATAAAGAATGAAAGGATTACTGATGCTGCCTCTGAATCGAGGAAAATGATGACCCCGAAGAAAAAGGAGGGGAAAGTACATGAGTTAAGCTCAACTCAGCGAATGTCAGCATATGTGTCTTCACCAACTGTGGGGCAAACAAATTACTCTCCCCATCATCAGAGTGGAGGAAAAAATCAGTTTGGTCAGTCAAATCAGAGATTTGCAAAGAATAACTGGAAACAAACCTGTTTTGATCCAATACCCATGTCATACACTGAACTCTTGCCACAGCTGCTAAAGAATCACCAAGTCGCCATTGTCCCTCAAGATCCTATACAACCGCCATATCCTAAATGGTACGACCCAAATGCAAGGTGTGAATACCATGCTGGGGTAGTCGGACAGTCCACTGAGAATTGTTATCCCTTGAAAGCCAAGGTGCAAAGCTTAGTTAAGGCTGGTTGGTTGAAGTTTAAGAAGACAGGAGAAGAACTAGATGTCAACCAAAACCCACTCCCAAATCATGAAAACCCTATAGTAAATGCTGTTGAGACATCCTTGAAATGTTACAAGGATAATGTTCATGATTTAACCACATCAATGAAGACTCTCTTCCTAATTCTTCATGAAGCTGGGTATATATTGCCAAGAGTCAGCAGTGATGGTGAGAGTGGAGTATGGTGCGTTGGTCAGAGGGGATGTTTACTTCACCCTGAGTTAGATGGACATTCCATAGAAGATTGTGTTGAGTTCAAGAGAGAAGTACAGAAATTGATGGATGCAAAATTTTTTATGGTAAGTCAAGTGAATATACAGGAAATTGAAGTTGATATGATTTCTGGTGCATCATCTTCAGAAGAAGCCACAAAAAAGGTGCCATCTATACGAGAGCCATTAATCGTTCATTATGAGCAGAAGCCGAGCATCACTCCTTGTATCCAGATGCCTAAGACAATGACCGTTGAAGTACCAGGTCCTTTTGCATATAAGGATAGTCGAGTTGTACCGTGGAGGTACGAGTGCCAATTCATTACAAATAGTATCAATTCTGCAGCAACTGGAGGGATGACTCATAGTGGGAGATGCTATACACCAGATGAAGAATTGCTCGAAGGAAGACGAAGCGCGACAGCGTAAGGGCAAAGCTGTGGAGGTGACGATTGAGGATGATCTAAATGATTTGAGCAAAGTTTTTGCTGATAAAGCCATACTAGTCGGAAAGAAGACCGATCATGAACCCGTCTCTAAAGAAGAAGCATGTGAGTTTCTGAAGTTGATCAAGCAAAGTGAGTACAAAGTAATAGAGCAGTTGCATTGTACTCCCAGCTCGTATATCGATTTTGTCATTATTCATGCACTCTGA

mRNA sequence

ATGAACAAAGTTGCCGCAAGTTTCCAGAGTGCCTTAAGTGAGCAGGCCGCATCATCCCAGAAGATCGTTGCGGAGGTTGAGAGTTTACAGAATTCAGCTGAAATATACAAATCCCAACTGACTAAGGCAGAACGCACAAACATGCTTCTTCAGGAGGCTGTTACAAGTGTTGAACACCAACTATCGATTTGTCGCAACGCGCGAGAGATGCGTCAGAGGACAGGTAGAGCAAGAAGCCGAGAATCTAAGACAGATGGCAAGGATGGCAGATCGGTTCGCATTACAGGCTATAACCCTCCGACAAGACATCATACCTACGCGGCCTTGCAGCAGCGAGTTGTCTCATTTTCTAGGGATCATAGGGCATTACCTAGGGCGTTTTGGGTGCTATCACTAGAACTTAGGGCATACACTTTGCATCATACTATTGTCCAGGCGGTACGTCAGGATGTAGAAGAGTTGAAGGAGCAATTGACGAAAATCTTGGAATTGCTCACTATCGGGAGAGGGAAAAATGTTGTTGGATCTTCGTCACAAGTAGAATTTGTAAATGCTGTTGAGACATCCTTGAAATGTTACAAGGATAATGTTCATGATTTAACCACATCAATGAAGACTCTCTTCCTAATTCTTCATGAAGCTGGGTATATATTGCCAAGAGTCAGCAGTGATGGTGAGAGTGGAGTATGGTGCGTTGGTCAGAGGGGATGTTTACTTCACCCTGAGTTAGATGGACATTCCATAGAAGATTGTGTTGAGTTCAAGAGAGAAGTACAGAAATTGATGGATGCAAAATTTTTTATGGTAAGTCAAGTGAATATACAGGAAATTGAAGTTGATATGATTTCTGGTGCATCATCTTCAGAAGAAGCCACAAAAAAGGTGCCATCTATACGAGAGCCATTAATCGTTCATTATGAGCAGAAGCCGAGCATCACTCCTTGTATCCAGATGCCTAAGACAATGACCGTTGAAGTACCAGTGGGAGATGCTATACACCAGATGAAGAATTGCTCGAAGGAAGACGAAGCGCGACAGCGTAAGGGCAAAGCTGTGGAGGTGACGATTGAGGATGATCTAAATGATTTGAGCAAAGTTTTTGCTGATAAAGCCATACTAGTCGGAAAGAAGACCGATCATGAACCCGTCTCTAAAGAAGAAGCATGTGAGTTTCTGAAGTTGATCAAGCAAAGTGAGTACAAAGTAATAGAGCAGTTGCATTGTACTCCCAGCTCGTATATCGATTTTGTCATTATTCATGCACTCTGA

Coding sequence (CDS)

ATGAACAAAGTTGCCGCAAGTTTCCAGAGTGCCTTAAGTGAGCAGGCCGCATCATCCCAGAAGATCGTTGCGGAGGTTGAGAGTTTACAGAATTCAGCTGAAATATACAAATCCCAACTGACTAAGGCAGAACGCACAAACATGCTTCTTCAGGAGGCTGTTACAAGTGTTGAACACCAACTATCGATTTGTCGCAACGCGCGAGAGATGCGTCAGAGGACAGGTAGAGCAAGAAGCCGAGAATCTAAGACAGATGGCAAGGATGGCAGATCGGTTCGCATTACAGGCTATAACCCTCCGACAAGACATCATACCTACGCGGCCTTGCAGCAGCGAGTTGTCTCATTTTCTAGGGATCATAGGGCATTACCTAGGGCGTTTTGGGTGCTATCACTAGAACTTAGGGCATACACTTTGCATCATACTATTGTCCAGGCGGTACGTCAGGATGTAGAAGAGTTGAAGGAGCAATTGACGAAAATCTTGGAATTGCTCACTATCGGGAGAGGGAAAAATGTTGTTGGATCTTCGTCACAAGTAGAATTTGTAAATGCTGTTGAGACATCCTTGAAATGTTACAAGGATAATGTTCATGATTTAACCACATCAATGAAGACTCTCTTCCTAATTCTTCATGAAGCTGGGTATATATTGCCAAGAGTCAGCAGTGATGGTGAGAGTGGAGTATGGTGCGTTGGTCAGAGGGGATGTTTACTTCACCCTGAGTTAGATGGACATTCCATAGAAGATTGTGTTGAGTTCAAGAGAGAAGTACAGAAATTGATGGATGCAAAATTTTTTATGGTAAGTCAAGTGAATATACAGGAAATTGAAGTTGATATGATTTCTGGTGCATCATCTTCAGAAGAAGCCACAAAAAAGGTGCCATCTATACGAGAGCCATTAATCGTTCATTATGAGCAGAAGCCGAGCATCACTCCTTGTATCCAGATGCCTAAGACAATGACCGTTGAAGTACCAGTGGGAGATGCTATACACCAGATGAAGAATTGCTCGAAGGAAGACGAAGCGCGACAGCGTAAGGGCAAAGCTGTGGAGGTGACGATTGAGGATGATCTAAATGATTTGAGCAAAGTTTTTGCTGATAAAGCCATACTAGTCGGAAAGAAGACCGATCATGAACCCGTCTCTAAAGAAGAAGCATGTGAGTTTCTGAAGTTGATCAAGCAAAGTGAGTACAAAGTAATAGAGCAGTTGCATTGTACTCCCAGCTCGTATATCGATTTTGTCATTATTCATGCACTCTGA

Protein sequence

MNKVAASFQSALSEQAASSQKIVAEVESLQNSAEIYKSQLTKAERTNMLLQEAVTSVEHQLSICRNAREMRQRTGRARSRESKTDGKDGRSVRITGYNPPTRHHTYAALQQRVVSFSRDHRALPRAFWVLSLELRAYTLHHTIVQAVRQDVEELKEQLTKILELLTIGRGKNVVGSSSQVEFVNAVETSLKCYKDNVHDLTTSMKTLFLILHEAGYILPRVSSDGESGVWCVGQRGCLLHPELDGHSIEDCVEFKREVQKLMDAKFFMVSQVNIQEIEVDMISGASSSEEATKKVPSIREPLIVHYEQKPSITPCIQMPKTMTVEVPVGDAIHQMKNCSKEDEARQRKGKAVEVTIEDDLNDLSKVFADKAILVGKKTDHEPVSKEEACEFLKLIKQSEYKVIEQLHCTPSSYIDFVIIHAL
Homology
[Close]
BLAST of Lsi06G007520 vs. TrEMBL
Match: A0A0A0KSJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G528440 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 9.3e-12
Identity = 42/82 (51.22%), Postives = 50/82 (60.98%), Query Frame = 1 

Query: 204 MKTLFLILHEAGYILPRVSSDGESGVWCVGQRGCLLHPELDGHSIEDCVEFKREVQKLMD 263
           M+ LF I HEAGYI   V      G   + ++ CL H     HSIE C EF+ EVQKLMD
Sbjct: 1   MRILFQIPHEAGYIRLSVDDGNVDGKESINKKTCLFHLGTCEHSIETCSEFRFEVQKLMD 60

Query: 264 AKFFMVSQVNIQEIEVDMISGA 286
           AK  +VSQ NIQE E+D+I  A
Sbjct: 61  AKILIVSQTNIQETEIDVIFDA 82

[Close]
BLAST of Lsi06G007520 vs. TrEMBL
Match: A0A061F6H8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_031483 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.3e-08
Identity = 74/260 (28.46%), Postives = 114/260 (43.85%), Query Frame = 1 

Query: 183 VNAVETSLKCYKDNVHDLTTSMKTLFLILHEAGYI-----LPRVSSDGESGVWCVGQRGC 242
           VNA+E  +   K N+ ++ T M+ +F  L +A  +      P V+   +    C     C
Sbjct: 706 VNAIEREVYV-KRNIREVETPMEKVFEALVKANMLEVWPKCPNVNDSRDIQRLC-----C 765

Query: 243 LLHPELDGHSIEDCVEFKREVQKLMDA---KFFMVSQVNIQEIEVDMISGASSSEEATKK 302
           L H    GH I DC  F+++VQ++MD    +F+M +     E  V+MIS  S+     K 
Sbjct: 766 LYHKGCVGHLIHDCSSFRKDVQRMMDESRIEFYMEAS----ESAVNMISNESTHPMKIKP 825

Query: 303 VPSIREPLIVHYEQKPSITPCIQMPKTMTVEVPVGDAIHQMKNCS-------------KE 362
           +    EP+    E +      I++PK    +     A+    NCS             + 
Sbjct: 826 LTIFYEPIREFVEDRTHAKMIIEVPKPFPYKND--KAVPWNYNCSVQVSKAEKWIAESQN 885

Query: 363 DEAR-------QRKG-----KAVEVTIEDDLNDLSKVFADKAILVGKKTDHE--PVSKEE 408
           D A         R G     KA+E    +   +  +   ++ +   K TD    PV+++E
Sbjct: 886 DAANITSVGGITRSGHCYSPKALENLKNEKEKEKEQSLREENVQPPKSTDGSKGPVNEKE 945

[Close]
BLAST of Lsi06G007520 vs. TrEMBL
Match: A0A061E733_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_010324 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.6e-08
Identity = 65/225 (28.89%), Postives = 102/225 (45.33%), Query Frame = 1 

Query: 194  KDNVHDLTTSMKTLFLILHEAGYILPRVSSDGESGVWCVGQRGCLLHPELDGHSIEDCVE 253
            K  + ++ T M  +F  L +   I P      E G        C  H    GHSI++C  
Sbjct: 846  KKGIDEIQTPMDKVFEALSKINVITPEPIDTKELGHDLA--YSCKFHMGAIGHSIQNCDG 905

Query: 254  FKREVQKLMDA---KFFMVSQVNIQEIEVDMISGASSSEEATKKVPSIR-EPLIVHYEQK 313
            F+R++Q+LMD+   +F+  ++ N+    V  I+G + +E A+    + + +PL + YE+ 
Sbjct: 906  FRRKLQELMDSSVIEFYEGAEENL----VGTINGDTPAEVASSSFGANKPKPLTIFYEEN 965

Query: 314  PSITPCIQMPKTMTVEVPVGDAIHQMKNCSKEDEARQRKGKAVEVTIEDDL---NDLSKV 373
             S  P      TM      G             E  +R GK      E  L   +  +K 
Sbjct: 966  RS--PMNDTSPTMIRNDLTGVGGITRSGRCYSPEVAERVGKGKPSQGEGGLKKADTFAKD 1025

Query: 374  FADKAILVGKKTDHEPVSKEEACEFLKLIKQSEYKVIEQLHCTPS 412
              D++I+        PV+++EA EFLK IK SEY V+EQL   P+
Sbjct: 1026 QVDESIVAPNSEVKNPVTEKEAGEFLKFIKHSEYSVVEQLTKMPA 1062

[Close]
BLAST of Lsi06G007520 vs. TrEMBL
Match: A0A061GRI1_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_038877 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-07
Identity = 68/251 (27.09%), Postives = 113/251 (45.02%), Query Frame = 1 

Query: 194 KDNVHDLTTSMKTLFLILHEAGYI-----LPRVSSDGESGVWCVGQRGCLLHPELDGHSI 253
           K N+ ++ TSM+ +F  L +A  +      P V+   +    C     CL H    GHSI
Sbjct: 124 KRNIREVETSMEKVFEALVKADMLEVWPECPNVNDSRDIQRIC-----CLYHKGCVGHSI 183

Query: 254 EDCVEFKREVQKLMD-AKFFMVSQVNIQEIEVDMISGASSSEEATKKVPSIREPLIVHYE 313
           +DC  F++EVQ++MD +K    ++ +  E  V+MIS  S+     K +    EP     E
Sbjct: 184 QDCSSFRKEVQRMMDESKIEFYTEAS--ESAVNMISKESTHPMKIKPLTIFYEPKREFVE 243

Query: 314 QKPSITPCIQMPKTMTVEVPVGDAIHQMKNCSKED-EAR----QRKGKAVEVTIEDDLND 373
            K      I++PK    +     A+    NC+ +  EA+    + +  A  +T    +  
Sbjct: 244 DKNRAKMIIEVPKPFPYK--DNKAVPWNYNCNVQVLEAKKWIAESQDDAANITGVGGITR 303

Query: 374 LSKVFADKAI-----LVGKKTDHEP-----------------VSKEEACEFLKLIKQSEY 412
             + ++ +A        G++ +  P                 V+++EA EFLK IK SEY
Sbjct: 304 SGRCYSPEAFENLKNEKGEEKEQSPREKKVQPPESTDGSKRSVTEKEAAEFLKFIKHSEY 363

[Close]
BLAST of Lsi06G007520 vs. TrEMBL
Match: A0A061E6J4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_010507 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 9.0e-07
Identity = 74/268 (27.61%), Postives = 119/268 (44.40%), Query Frame = 1 

Query: 183 VNAVETSLKCYKDNVHDLTTSMKTLFLILHEAGYI-----LPRVSSDGESGVWCVGQRGC 242
           VNA+E  +   K N+ ++ TSM+ +F  L +A  +      P V+   +    C     C
Sbjct: 544 VNAIEREVYV-KRNIREVETSMEKVFEALVKADMLKVWPECPNVNDSRDIQRLC-----C 603

Query: 243 LLHPELDGHSIEDCVEFKREVQKLMD-AKFFMVSQVNIQEIEVDMISGASSSEEATKKVP 302
           L H    GHSI+ C  F++EVQ++MD +K    ++ +  E  V+MIS  S+        P
Sbjct: 604 LYHKGCVGHSIQGCSSFRKEVQRMMDESKIEFYTEAS--ESAVNMISKESTH-------P 663

Query: 303 SIREPLIVHYEQKPSITPCIQMPKTMTVEVPV------GDAIHQMKNCSKE-DEAR---- 362
              +PL + YE K  +       K M +EVP         A+    NC+ +  EA+    
Sbjct: 664 MKIKPLTIFYEPKGELVEDKNHAK-MVIEVPKPFPYKDNKAVPWNYNCNVQVSEAKKWIA 723

Query: 363 QRKGKAVEVTIEDDLNDLSKVFADKAI--LVGKKTDHEPVS------------------- 412
           + +  A  +T    +    + ++ +A   L  +K   +  S                   
Sbjct: 724 ESQDDAANITGVGGITRSGRCYSPEAFENLKNEKGGEKEQSPREEKVQPPESTDGSKRSV 783

[Close]
BLAST of Lsi06G007520 vs. NCBI nr
Match: gi|659122237|ref|XP_008461036.1| (PREDICTED: uncharacterized protein LOC103499741 [Cucumis melo])

HSP 1 Score: 194.1 bits (492), Expect = 4.8e-46
Identity = 116/265 (43.77%), Postives = 154/265 (58.11%), Query Frame = 1 

Query: 183 VNAVETSLKCYKDNVHDLTTSMKTLFLILHEAGYILPRVSSDGESGVWCVGQRGCLLHPE 242
           +N V+T  +  K+ V  +TTSM TLF ILH AGY+ PR ++D    + CV +  CL + E
Sbjct: 410 INVVDTFTERNKNMVSGVTTSMNTLFQILHGAGYLSPRFNNDDGEKIGCVNKEECLFYLE 469

Query: 243 LDGHSIEDCVEFKREVQKLMDAKFFMVSQVNIQEIEVDMISGASSSEEATKKVPSIREPL 302
            + HSIEDC EFK  VQKLMDAK  +V Q+++QEIEV+MI+  SS+++ + +  SI +PL
Sbjct: 470 TNDHSIEDCCEFKNWVQKLMDAKILLVGQISMQEIEVNMITDTSSTKKTSNETTSIWKPL 529

Query: 303 IVHYEQKPSITPCIQMPKTMTV------------EVP------------VGDAIH----- 362
           ++HYE+KPSI   IQ PK MT+             VP            V   +      
Sbjct: 530 VIHYEEKPSIMSYIQKPKAMTIEIPSPFAYKDNHVVPWKYECQFITNNVVSTTVEGLTRS 589

Query: 363 -------QMKNCSKEDEARQRKGKAVEVTIEDDLNDLSKVFADKAILVGKKTDHEPVSKE 412
                   +K+ SKEDE R+RKGKA+E+ +E                  K+ D E VSK+
Sbjct: 590 GRCYTLANLKDVSKEDEVRRRKGKAIEMAVE------------------KEIDREVVSKD 649

[Close]
BLAST of Lsi06G007520 vs. NCBI nr
Match: gi|659094545|ref|XP_008448120.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103490408 [Cucumis melo])

HSP 1 Score: 117.1 bits (292), Expect = 7.5e-23
Identity = 59/77 (76.62%), Postives = 67/77 (87.01%), Query Frame = 1 

Query: 335 MKNCSKEDEARQRKGKAVEVTIEDDLNDLSKVFADKAILVGKKTDHEPVSKEEACEFLKL 394
           +K+ SKEDE R+RKGKA+E+  EDDLNDLSKVF +K  LV K+TDHE VSKEEACEFLKL
Sbjct: 50  LKDVSKEDEVRRRKGKAIEMAGEDDLNDLSKVFTEKTTLVEKETDHEVVSKEEACEFLKL 109

Query: 395 IKQSEYKVIEQLHCTPS 412
           IKQSEYKVIEQLH TP+
Sbjct: 110 IKQSEYKVIEQLHRTPA 126

[Close]
BLAST of Lsi06G007520 vs. NCBI nr
Match: gi|700196230|gb|KGN51407.1| (hypothetical protein Csa_5G528440 [Cucumis sativus])

HSP 1 Score: 79.7 bits (195), Expect = 1.3e-11
Identity = 42/82 (51.22%), Postives = 50/82 (60.98%), Query Frame = 1 

Query: 204 MKTLFLILHEAGYILPRVSSDGESGVWCVGQRGCLLHPELDGHSIEDCVEFKREVQKLMD 263
           M+ LF I HEAGYI   V      G   + ++ CL H     HSIE C EF+ EVQKLMD
Sbjct: 1   MRILFQIPHEAGYIRLSVDDGNVDGKESINKKTCLFHLGTCEHSIETCSEFRFEVQKLMD 60

Query: 264 AKFFMVSQVNIQEIEVDMISGA 286
           AK  +VSQ NIQE E+D+I  A
Sbjct: 61  AKILIVSQTNIQETEIDVIFDA 82

[Close]
BLAST of Lsi06G007520 vs. NCBI nr
Match: gi|590609111|ref|XP_007021450.1| (Uncharacterized protein TCM_031483 [Theobroma cacao])

HSP 1 Score: 69.3 bits (168), Expect = 1.8e-08
Identity = 74/260 (28.46%), Postives = 114/260 (43.85%), Query Frame = 1 

Query: 183 VNAVETSLKCYKDNVHDLTTSMKTLFLILHEAGYI-----LPRVSSDGESGVWCVGQRGC 242
           VNA+E  +   K N+ ++ T M+ +F  L +A  +      P V+   +    C     C
Sbjct: 706 VNAIEREVYV-KRNIREVETPMEKVFEALVKANMLEVWPKCPNVNDSRDIQRLC-----C 765

Query: 243 LLHPELDGHSIEDCVEFKREVQKLMDA---KFFMVSQVNIQEIEVDMISGASSSEEATKK 302
           L H    GH I DC  F+++VQ++MD    +F+M +     E  V+MIS  S+     K 
Sbjct: 766 LYHKGCVGHLIHDCSSFRKDVQRMMDESRIEFYMEAS----ESAVNMISNESTHPMKIKP 825

Query: 303 VPSIREPLIVHYEQKPSITPCIQMPKTMTVEVPVGDAIHQMKNCS-------------KE 362
           +    EP+    E +      I++PK    +     A+    NCS             + 
Sbjct: 826 LTIFYEPIREFVEDRTHAKMIIEVPKPFPYKND--KAVPWNYNCSVQVSKAEKWIAESQN 885

Query: 363 DEAR-------QRKG-----KAVEVTIEDDLNDLSKVFADKAILVGKKTDHE--PVSKEE 408
           D A         R G     KA+E    +   +  +   ++ +   K TD    PV+++E
Sbjct: 886 DAANITSVGGITRSGHCYSPKALENLKNEKEKEKEQSLREENVQPPKSTDGSKGPVNEKE 945

[Close]
BLAST of Lsi06G007520 vs. NCBI nr
Match: gi|590694503|ref|XP_007044626.1| (Gag-pro-like protein [Theobroma cacao])

HSP 1 Score: 68.9 bits (167), Expect = 2.4e-08
Identity = 65/225 (28.89%), Postives = 102/225 (45.33%), Query Frame = 1 

Query: 194  KDNVHDLTTSMKTLFLILHEAGYILPRVSSDGESGVWCVGQRGCLLHPELDGHSIEDCVE 253
            K  + ++ T M  +F  L +   I P      E G        C  H    GHSI++C  
Sbjct: 846  KKGIDEIQTPMDKVFEALSKINVITPEPIDTKELGHDLA--YSCKFHMGAIGHSIQNCDG 905

Query: 254  FKREVQKLMDA---KFFMVSQVNIQEIEVDMISGASSSEEATKKVPSIR-EPLIVHYEQK 313
            F+R++Q+LMD+   +F+  ++ N+    V  I+G + +E A+    + + +PL + YE+ 
Sbjct: 906  FRRKLQELMDSSVIEFYEGAEENL----VGTINGDTPAEVASSSFGANKPKPLTIFYEEN 965

Query: 314  PSITPCIQMPKTMTVEVPVGDAIHQMKNCSKEDEARQRKGKAVEVTIEDDL---NDLSKV 373
             S  P      TM      G             E  +R GK      E  L   +  +K 
Sbjct: 966  RS--PMNDTSPTMIRNDLTGVGGITRSGRCYSPEVAERVGKGKPSQGEGGLKKADTFAKD 1025

Query: 374  FADKAILVGKKTDHEPVSKEEACEFLKLIKQSEYKVIEQLHCTPS 412
              D++I+        PV+++EA EFLK IK SEY V+EQL   P+
Sbjct: 1026 QVDESIVAPNSEVKNPVTEKEAGEFLKFIKHSEYSVVEQLTKMPA 1062

The following BLAST results are available for this feature:
BLAST of Lsi06G007520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi06G007520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSJ3_CUCSA9.3e-1251.22Uncharacterized protein OS=Cucumis sativus GN=Csa_5G528440 PE=4 SV=1[more]
A0A061F6H8_THECC1.3e-0828.46Uncharacterized protein OS=Theobroma cacao GN=TCM_031483 PE=4 SV=1[more]
A0A061E733_THECC1.6e-0828.89Gag-pro-like protein OS=Theobroma cacao GN=TCM_010324 PE=4 SV=1[more]
A0A061GRI1_THECC1.4e-0727.09Gag-pro-like protein OS=Theobroma cacao GN=TCM_038877 PE=4 SV=1[more]
A0A061E6J4_THECC9.0e-0727.61Uncharacterized protein OS=Theobroma cacao GN=TCM_010507 PE=4 SV=1[more]
BLAST of Lsi06G007520 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Lsi06G007520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659122237|ref|XP_008461036.1|4.8e-4643.77PREDICTED: uncharacterized protein LOC103499741 [Cucumis melo][more]
gi|659094545|ref|XP_008448120.1|7.5e-2376.62PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103490408 [Cucumis me... [more]
gi|700196230|gb|KGN51407.1|1.3e-1151.22hypothetical protein Csa_5G528440 [Cucumis sativus][more]
gi|590609111|ref|XP_007021450.1|1.8e-0828.46Uncharacterized protein TCM_031483 [Theobroma cacao][more]
gi|590694503|ref|XP_007044626.1|2.4e-0828.89Gag-pro-like protein [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G007520.1Lsi06G007520.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 26..53
score: -coord: 144..164
scor