Lsi06G007330 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G007330
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	23 kDa jasmonate-induced protein
Location	chr06 : 12729011 .. 12731262 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTTTGGTGCACAACTTGGGTGACACTAATCATAATTGTTTATTCATGTTATTTATTTATTATCATTCAAAATTTATCTGCCACCTACTCTTGATTTTTTTTTTTTTTCATTTCTTTTATTTTAAAGTTTAATTTGTGAGAGTATAAATACGTGAAAGTAGGAAGCAAAAAAATCACAACAAATATTTGCACACAAGTTTTCAGAGAGTAAGATTCAGAAACTTCCCGTTTCTCTATTCAACAACAAATATTTCATAATGTTTTTGTTGTTTTTTTTGTTTATATATATATATATATATATATATATATATATATATATATATATATACACGCGTTGTTTTGAAAAATATAAAAAAAATTTACTATCTATCAGCTATCGCTAATATACAATAAATTTTCTTTCTATTTCTAAATAGTTTAATATTTTTTTATATATATTTGGGCTTAAATTTTCTTTCAATGTTTTTTTTTTTAAAAATAAATTAAAACAAAAAAAAAAAGTTGCAAATCGATTTCTATTTTCTTTAATAAATTGCACAAAATTGAAAACTAAAAATTGTTATTCAATGTATTTTTGTTTATTTTCCTCAAAATGCACGAAAATATTAAGAATGAGTACATAACATGACATGCACCCTATTGAATATTGTTAGAAAGTATAATTTATGGAGTTTTTTTTTTCTTTTTTGTTTAGAGAGTTTTGAAGATGGCCTACAATGTCTTTGGTAATCCAATCACAAATCAAACTTTGGAAGCCATGCCTGAATATGAAGGAAAAACTATAACACGTCGAGATAGAGCACATGTCGCTCTTAATATGAAGAATGCTGAAGATAAAGACAAAAATGCTCGAGAATATGTAGAAAAATTAAAAAAACGATGGGGAACTGGAGTCTCTACCCTTTGTTTAATTTACAATGCCACTGGTGATACTATAACATATGTTTGCGAACACAATTGGCATGGCCATATTGGACCTGGTCCTTACCCAATGGAGATTGCAAATGGTCAATGGAGTGGTTTTCTTCATGTTAAAACATCTGGAACTGCCACTGGCTCTTCTGCTGCTGTTGTATATCGTGGTCTAAATTCGTATGGTGCAACTTGTGATTGGATGGCATCTTGATCTAATCCATGGAATCATGCAGCTTCCACCAATACGGTTAGCCTTTTTTTTCTTTTTTTTTTTTAATTATTATTCTAACCTATGTGCTTCTAGTGTTTCAACCATAAATTCTTCTAAAAAAATATTTAAAACTCTTCTGAATCTCTCAAATTTGAATATTATGTCATTTTAATTTATCATATTTTTTAAAGGTCTACTTTGGGTAGTGAAATTAATTACTTTCTCAAATATAAAAAAGATTTTAAACTATTTATTATGTAATACTAATTTTTGTAAGAAAATTTTCACAAATAAAAAAAATATTAAACTATTTACAGAAAATAGCAAAAAAAAATATTGATAGACATTGATAAACTTTTATTAATATATATCAGTGATAGACATCTATCATTTCTATTACTTATAGACCCTGATAGACTTCTATCAGCATCTATCAGAACTATCTAAAATTTTGTTATTTTGTGTAAATAGTTTCTTTTATTTTTCTATTTTAAAAAATTCCCTTTTTTGTATTACATCTAATTACTCATTATAATGCTTTCTTTTTTAAGCAAATCATTATAATACCTTTAACGGTTGGATATACTTTTAAATCATACTTGCCTTTAGTCTCTATTATTTTATGTCCTCAATTGTTTAGCAGACACATTTGGATCATGTCACATTTATATATAATATTTGGGTTAAATTAAAAATGAAGATATCATTGAACTTAAATATTCGGACTAATAAATTATGGGGAAAATAGTTTGAAAAATGACTTGTGGGCACAAGTTGAGTGGGAATGGGTTAATTTAATTTTGGTCCTATTTATATTCTTGCAACTAATTTCCCCGATCTGAATTTTGTTTCCAATTGTTAGCCCTGGATAGTTAAAAGTATAAGTTCACTAATTTTTATCTTTTTGTAATTTACTTATTTTTGTGTTTTTATTAGGCATATACCGAGATACGTGAAGAGGGACATTATAATAAACATGATAATTGGAACTACATCTCTAATTTATTATACAACTCGGGTGTTAGCAAATCAGATAATTGGAATGGATGTTTATCAACCGTGATAACAGGAAGTGATACTAGTCCCATATTTGAAGCAATATTCACTCTCGCAGAAGCTTGA

mRNA sequence

ATGTCAGTTTTGAAGATGGCCTACAATGTCTTTGGTAATCCAATCACAAATCAAACTTTGGAAGCCATGCCTGAATATGAAGGAAAAACTATAACACGTCGAGATAGAGCACATGTCGCTCTTAATATGAAGAATGCTGAAGATAAAGACAAAAATGCTCGAGAATATGTAGAAAAATTAAAAAAACGATGGGGAACTGGAGTCTCTACCCTTTGTTTAATTTACAATGCCACTGGTGATACTATAACATATGTTTGCGAACACAATTGGCATGGCCATATTGGACCTGGTCCTTACCCAATGGAGATTGCAAATGGTCAATGGAGTGGTTTTCTTCATGTTAAAACATCTGGAACTGCCACTGGCTCTTCTGCTGCTGTTGCATATACCGAGATACGTGAAGAGGGACATTATAATAAACATGATAATTGGAACTACATCTCTAATTTATTATACAACTCGGGTGTTAGCAAATCAGATAATTGGAATGGATGTTTATCAACCGTGATAACAGGAAGTGATACTAGTCCCATATTTGAAGCAATATTCACTCTCGCAGAAGCTTGA

Coding sequence (CDS)

ATGTCAGTTTTGAAGATGGCCTACAATGTCTTTGGTAATCCAATCACAAATCAAACTTTGGAAGCCATGCCTGAATATGAAGGAAAAACTATAACACGTCGAGATAGAGCACATGTCGCTCTTAATATGAAGAATGCTGAAGATAAAGACAAAAATGCTCGAGAATATGTAGAAAAATTAAAAAAACGATGGGGAACTGGAGTCTCTACCCTTTGTTTAATTTACAATGCCACTGGTGATACTATAACATATGTTTGCGAACACAATTGGCATGGCCATATTGGACCTGGTCCTTACCCAATGGAGATTGCAAATGGTCAATGGAGTGGTTTTCTTCATGTTAAAACATCTGGAACTGCCACTGGCTCTTCTGCTGCTGTTGCATATACCGAGATACGTGAAGAGGGACATTATAATAAACATGATAATTGGAACTACATCTCTAATTTATTATACAACTCGGGTGTTAGCAAATCAGATAATTGGAATGGATGTTTATCAACCGTGATAACAGGAAGTGATACTAGTCCCATATTTGAAGCAATATTCACTCTCGCAGAAGCTTGA

Protein sequence

MSVLKMAYNVFGNPITNQTLEAMPEYEGKTITRRDRAHVALNMKNAEDKDKNAREYVEKLKKRWGTGVSTLCLIYNATGDTITYVCEHNWHGHIGPGPYPMEIANGQWSGFLHVKTSGTATGSSAAVAYTEIREEGHYNKHDNWNYISNLLYNSGVSKSDNWNGCLSTVITGSDTSPIFEAIFTLAEA

Homology

[Close]

BLAST of Lsi06G007330 vs. Swiss-Prot
Match: JI23_HORVU (23 kDa jasmonate-induced protein OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.0e-33
Identity = 85/207 (41.06%), Postives = 116/207 (56.04%), Query Frame = 1


Query: 6   MAYNVFGNPITNQTLEAMPEYEGKTITRRDRAHVALNMKNAEDKDKNAREYVEKLKKRWG 65
           MA  VFG PI+ QT+ A  EY+ + IT++D A  A+ M NA  KD NA+++V+ LK+R+G
Sbjct: 1   MASGVFGTPISAQTVIATGEYK-EPITQKDVADYAMKMINAGGKDVNAQKFVDNLKERYG 60

Query: 66  TGVSTLCLIYNATGDTITYVCEHNWHGHIGPGPYPMEIANGQWSGFLHVKTSGTATG--- 125
            G++  CL+YNATG T+ +   ++WHGHI   PYP +I NGQW  FLHV  SG A G   
Sbjct: 61  NGIAVKCLLYNATGATLNFAKYNDWHGHIYDTPYPSDIQNGQWGAFLHVHPSGAAAGSAG 120

Query: 126 ----------SSAAV---------------AYTEIREEGHYNKHDNWNYISNL-LYNSGV 184
                     SS++                 YTEIREEGHY    +W+YI N+ L NS V
Sbjct: 121 AVVYRSKIPSSSSSCDWLFSWTVPYIGGNGVYTEIREEGHYPSVGSWDYIYNVKLKNSSV 180

[Close]

BLAST of Lsi06G007330 vs. TrEMBL
Match: A0A097BU21_CITLA (23 kDa jasmonate-induced protein OS=Citrullus lanatus PE=2 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.3e-79
Identity = 149/213 (69.95%), Postives = 165/213 (77.46%), Query Frame = 1


Query: 6   MAYNVFGNPITNQTLEAMPEYEGKTITRRDRAHVALNMKNAEDKDKNAREYVEKLKKRWG 65
           MAYNVFGNPITN+TL AMP+YEGK ITRRDRAHVALNMKNA+DKDKNAREYVE+LK++WG
Sbjct: 1   MAYNVFGNPITNETLAAMPDYEGKKITRRDRAHVALNMKNAQDKDKNAREYVERLKQQWG 60

Query: 66  TGVSTLCLIYNATGDTITYVCEHNWHGHIGPGPYPMEIANGQWSGFLHVKTSGTATGSSA 125
           TGVSTLCLIYNATGDTI +V EH+WHGHIGPGPYP+EIANGQW GFLHVKTSGTATGSSA
Sbjct: 61  TGVSTLCLIYNATGDTIKFVVEHSWHGHIGPGPYPIEIANGQWGGFLHVKTSGTATGSSA 120

Query: 126 AVAYTEI------------------------------REEGHYNKHDNWNYISNLLYNSG 185
           A  Y  +                              REEGHY K+D+WNYISNLLY+SG
Sbjct: 121 ACVYRGLNNDGVVCDWMLAWSNPWNRSSSDNTAYTEIREEGHYTKNDHWNYISNLLYDSG 180

Query: 186 VSKSDNWNGCLSTVITGSDTSPIFEAIFTLAEA 189
           +S SD WN C+S V TGSDTSPIFE I TL +A
Sbjct: 181 LSSSDKWNKCVSNVTTGSDTSPIFEGILTLQDA 213

[Close]

BLAST of Lsi06G007330 vs. TrEMBL
Match: A0A0A0M0F4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G642550 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 4.4e-62
Identity = 124/211 (58.77%), Postives = 148/211 (70.14%), Query Frame = 1


Query: 6   MAYNVFGNPITNQTLEAMPEYEGKTITRRDRAHVALNMKNAEDKDKNAREYVEKLKKRWG 65
           MA NVFGNPITN TL+AMP+YEGK ITRRDRA+VALNMKNA+ KDK+A++YVEKL++ WG
Sbjct: 1   MADNVFGNPITNSTLQAMPDYEGKVITRRDRAYVALNMKNAQGKDKDAQDYVEKLREEWG 60

Query: 66  TGVSTLCLIYNATGDTITYVCEHNWHGHIGPGPYPMEIANGQWSGFLHVKTSGTATGSSA 125
           +GV+TLCLIYNATGDTI +VCE++WHGHIGP PYP EI NGQW  FLHVKT+   +GS+A
Sbjct: 61  SGVATLCLIYNATGDTIKFVCEYSWHGHIGPSPYPSEIENGQWGAFLHVKTAVVPSGSAA 120

Query: 126 AVAY------------------------------TEIREEGHYN-KHDNWNYISNLLYNS 185
           +  Y                              TEIRE+GHY   HD W YI +LL  +
Sbjct: 121 SCVYRGQNNNGQLCDWMVAWSNPYHRLFADNKAYTEIREQGHYEAPHDYWEYIFSLL--N 180

[Close]

BLAST of Lsi06G007330 vs. TrEMBL
Match: M5X699_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020548mg PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.5e-43
Identity = 106/212 (50.00%), Postives = 124/212 (58.49%), Query Frame = 1


Query: 6   MAYNVFGNPITNQTLEAMPEYEGKTITRRDRAHVALNMKNAEDKDKNAREYVEKLKKRWG 65
           MAYNVFGNPI N TL+ MPEY+ K I R DRA VAL MKN  DKD  A  +VE LKK+ G
Sbjct: 1   MAYNVFGNPIQNSTLKGMPEYKLKAIERNDRAKVALQMKNVGDKDLKALTFVENLKKQHG 60

Query: 66  TGVSTLCLIYNATGDTITYVCEHNWHGHIGPGPYPMEIANGQWSGFLHVKTSGTATGSSA 125
            G+STLCLIYNATGDT+TY    +W GHIG  PYP  IANGQW  FLHV+  GT  GS A
Sbjct: 61  DGISTLCLIYNATGDTLTYSISKDWCGHIGHFPYPTLIANGQWGAFLHVQKLGTPEGSVA 120

Query: 126 AVAYTEIREEG---------------HYNKHDNWNYISN----------LLYN----SGV 185
            V Y    ++G               + NK    +  +           L+Y+    SG 
Sbjct: 121 TVVYNGKNKDGEDRGRLLAWSNNRVAYKNKVFTESRTAEHYLDNVGWIPLIYDYVDKSGT 180

Query: 186 SKSDNWNGCLSTVITGSDTSPIFEAIFTLAEA 189
            KS+ W GC ST+ TG  TSPI EAIF L +A
Sbjct: 181 YKSEKWGGCFSTISTGYGTSPIVEAIFMLDDA 212

[Close]

BLAST of Lsi06G007330 vs. TrEMBL
Match: A0A0D3HL17_9ORYZ (Uncharacterized protein OS=Oryza barthii PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-34
Identity = 91/210 (43.33%), Postives = 128/210 (60.95%), Query Frame = 1


Query: 6   MAYNVFGNPITNQTLEAMPEYEGKTITRRDRAHVALNMKNAEDKDKNAREYVEKLKKRWG 65
           MA NVFG PIT++TL+A+PEY  K I+++DRA+VA++MKNAE KD NAR++VE L++ + 
Sbjct: 1   MASNVFGTPITDETLKALPEYHNKQISQKDRAYVAMDMKNAEGKDVNARKFVEDLREHFH 60

Query: 66  TGVSTLCLIYNATGDTITYVCEHNWHGHIGPGPYPMEIANGQWSGFLHVKTSGTATGSSA 125
              +TLCLIYNATGD + YV ++ W GH+   PYP+ I+NGQW  FLH + S  +   +A
Sbjct: 61  EEQATLCLIYNATGDPVIYVRDYQWQGHLCGSPYPVVISNGQWGAFLHGQWSYKSDTQAA 120

Query: 126 AV--------------------------AYTEIREEGHYNKHDNW-NYISNLLYNS---G 185
            V                           YTEIR+  +Y+K D + NY+S+LL +S    
Sbjct: 121 VVYSGKNDGGHNKHWLITWRHNTNGINRVYTEIRQPQYYDKDDVFQNYVSDLLVSSNSAS 180

[Close]

BLAST of Lsi06G007330 vs. TrEMBL
Match: M0T1C4_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 6.6e-34
Identity = 89/209 (42.58%), Postives = 118/209 (56.46%), Query Frame = 1


Query: 7   AYNVFGNPITNQTLEAMPEYEGKTITRRDRAHVALNMKNAEDKDKNAREYVEKLKKRWGT 66
           A NVFG+PIT++TLE + EY  K   R+ R  +AL+ +   +K ++A +YV ++K+RWGT
Sbjct: 20  ANNVFGDPITDETLEGVTEYAKKL--RKLRVAMALDTQMKGNKYESALKYVREMKERWGT 79

Query: 67  GVSTLCLIYNATGDTITYVCEHNWHGHI-GPGPYPMEIANGQWSGFLHVKTSGTATGSSA 126
           GVSTLCL+YNATG+ +T    H+W GHI    PYPM I NGQW  +LHVK SGT  GS+A
Sbjct: 80  GVSTLCLVYNATGEPLTLHSTHDWWGHIYDQSPYPMRIGNGQWGAYLHVKRSGTPDGSNA 139

Query: 127 AV------------------------------AYTEIREEGHYNKHDNWNYISNLLYNSG 185
           AV                              AY EI + G+Y+  D W  I+    N+G
Sbjct: 140 AVVYRGKNDGGDDTDSLLFWDNPWNKASYSNQAYAEINQAGYYDNID-WGVIAGKGSNAG 199

[Close]

BLAST of Lsi06G007330 vs. NCBI nr
Match: gi|694188379|gb|AIS71930.1| (23 kDa jasmonate-induced protein [Citrullus lanatus])

HSP 1 Score: 303.9 bits (777), Expect = 1.9e-79
Identity = 149/213 (69.95%), Postives = 165/213 (77.46%), Query Frame = 1


Query: 6   MAYNVFGNPITNQTLEAMPEYEGKTITRRDRAHVALNMKNAEDKDKNAREYVEKLKKRWG 65
           MAYNVFGNPITN+TL AMP+YEGK ITRRDRAHVALNMKNA+DKDKNAREYVE+LK++WG
Sbjct: 1   MAYNVFGNPITNETLAAMPDYEGKKITRRDRAHVALNMKNAQDKDKNAREYVERLKQQWG 60

Query: 66  TGVSTLCLIYNATGDTITYVCEHNWHGHIGPGPYPMEIANGQWSGFLHVKTSGTATGSSA 125
           TGVSTLCLIYNATGDTI +V EH+WHGHIGPGPYP+EIANGQW GFLHVKTSGTATGSSA
Sbjct: 61  TGVSTLCLIYNATGDTIKFVVEHSWHGHIGPGPYPIEIANGQWGGFLHVKTSGTATGSSA 120

Query: 126 AVAYTEI------------------------------REEGHYNKHDNWNYISNLLYNSG 185
           A  Y  +                              REEGHY K+D+WNYISNLLY+SG
Sbjct: 121 ACVYRGLNNDGVVCDWMLAWSNPWNRSSSDNTAYTEIREEGHYTKNDHWNYISNLLYDSG 180

Query: 186 VSKSDNWNGCLSTVITGSDTSPIFEAIFTLAEA 189
           +S SD WN C+S V TGSDTSPIFE I TL +A
Sbjct: 181 LSSSDKWNKCVSNVTTGSDTSPIFEGILTLQDA 213

[Close]

BLAST of Lsi06G007330 vs. NCBI nr
Match: gi|659086035|ref|XP_008443732.1| (PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo])

HSP 1 Score: 262.7 bits (670), Expect = 4.9e-67
Identity = 129/211 (61.14%), Postives = 152/211 (72.04%), Query Frame = 1


Query: 6   MAYNVFGNPITNQTLEAMPEYEGKTITRRDRAHVALNMKNAEDKDKNAREYVEKLKKRWG 65
           MA NVFGNPITN TL+AMPEYEGKTITRRDRA+VA NMKNA++KD++AR++VEKL++ WG
Sbjct: 1   MADNVFGNPITNSTLQAMPEYEGKTITRRDRAYVAFNMKNAQNKDRSARDHVEKLREEWG 60

Query: 66  TGVSTLCLIYNATGDTITYVCEHNWHGHIGPGPYPMEIANGQWSGFLHVKTSGTATGSSA 125
            GV+TLCLIYNATGDTIT+VCEH+WHGHIG GPYP EIANGQW  FLHVKT+   +GS+ 
Sbjct: 61  HGVATLCLIYNATGDTITFVCEHSWHGHIGSGPYPSEIANGQWGAFLHVKTAVVPSGSAG 120

Query: 126 A------------------------------VAYTEIREEGHYNKHDNWNYISNLLYNSG 185
           A                               AYTEIRE+GHY  HD+W YI +LL NS 
Sbjct: 121 ACVYRGLNNYGEVCDWMVAWSNPYYRLFADNTAYTEIREKGHYEAHDHWEYIFDLLNNSS 180

Query: 186 VSKSDNWNGCLSTVITGSDTSPIFEAIFTLA 187
           +  SD WN C S V TG+DT+PIFE I TL+
Sbjct: 181 LIHSDEWNKCQSKVSTGNDTNPIFEGILTLS 211

[Close]

BLAST of Lsi06G007330 vs. NCBI nr
Match: gi|700211516|gb|KGN66612.1| (hypothetical protein Csa_1G642550 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 6.3e-62
Identity = 124/211 (58.77%), Postives = 148/211 (70.14%), Query Frame = 1


Query: 6   MAYNVFGNPITNQTLEAMPEYEGKTITRRDRAHVALNMKNAEDKDKNAREYVEKLKKRWG 65
           MA NVFGNPITN TL+AMP+YEGK ITRRDRA+VALNMKNA+ KDK+A++YVEKL++ WG
Sbjct: 1   MADNVFGNPITNSTLQAMPDYEGKVITRRDRAYVALNMKNAQGKDKDAQDYVEKLREEWG 60

Query: 66  TGVSTLCLIYNATGDTITYVCEHNWHGHIGPGPYPMEIANGQWSGFLHVKTSGTATGSSA 125
           +GV+TLCLIYNATGDTI +VCE++WHGHIGP PYP EI NGQW  FLHVKT+   +GS+A
Sbjct: 61  SGVATLCLIYNATGDTIKFVCEYSWHGHIGPSPYPSEIENGQWGAFLHVKTAVVPSGSAA 120

Query: 126 AVAY------------------------------TEIREEGHYN-KHDNWNYISNLLYNS 185
           +  Y                              TEIRE+GHY   HD W YI +LL  +
Sbjct: 121 SCVYRGQNNNGQLCDWMVAWSNPYHRLFADNKAYTEIREQGHYEAPHDYWEYIFSLL--N 180

[Close]

BLAST of Lsi06G007330 vs. NCBI nr
Match: gi|1009157728|ref|XP_015896910.1| (PREDICTED: 23 kDa jasmonate-induced protein-like [Ziziphus jujuba])

HSP 1 Score: 236.1 bits (601), Expect = 5.0e-59
Identity = 122/209 (58.37%), Postives = 139/209 (66.51%), Query Frame = 1


Query: 6   MAYNVFGNPITNQTLEAMPEYEGKTITRRDRAHVALNMKNAEDKDKNAREYVEKLKKRWG 65
           M  NVFGNPIT  TLEAMPEY GK ITR DRAHVALNMKNAE KD NAR++VE LK+R+G
Sbjct: 1   MGSNVFGNPITTATLEAMPEYIGKVITRTDRAHVALNMKNAEGKDVNARKFVENLKERYG 60

Query: 66  TGVSTLCLIYNATGDTITYVCEHNWHGHIGPGPYPMEIANGQWSGFLHVKTSGTATGSSA 125
            GVSTLCLIYNATGDT+ +V  H+W GHIG  PYP EIANGQW  +LHVKTSG ATGS A
Sbjct: 61  NGVSTLCLIYNATGDTLKHVGYHDWRGHIGESPYPNEIANGQWGAYLHVKTSGAATGSIA 120

Query: 126 AVAYTEIRE--------------------------EGHYNKHDNWNYISNLLYNSGVSKS 185
           A  Y    E                          EGH+ + D+W+YI N+L N  +S +
Sbjct: 121 ATVYRGKNEAGKDCDWMLSWYNPWSGKNRVYTEIREGHHYEEDHWDYIYNILSNKELSYT 180

Query: 186 DNWNGCLSTVITGSDTSPIFEAIFTLAEA 189
           + WNGC+STV TG  TSPIFE I  L  A
Sbjct: 181 ETWNGCISTVTTGVSTSPIFEGIMKLVGA 209

[Close]

BLAST of Lsi06G007330 vs. NCBI nr
Match: gi|743780066|ref|XP_010920410.1| (PREDICTED: 23 kDa jasmonate-induced protein-like [Elaeis guineensis])

HSP 1 Score: 228.8 bits (582), Expect = 7.9e-57
Identity = 118/214 (55.14%), Postives = 141/214 (65.89%), Query Frame = 1


Query: 6   MAYNVFGNPITNQTLEAMPEYEGK-TITRRDRAHVALNMKNAEDKDKNAREYVEKLKKRW 65
           MA NVFGNPIT+QTL  +PEY+ K  IT  DRA VALNMKNA +KD NAR++VE LK+R+
Sbjct: 1   MASNVFGNPITDQTLRGLPEYKDKPVITATDRATVALNMKNAGNKDVNARKFVENLKERY 60

Query: 66  GTGVSTLCLIYNATGDTITYVCEHNWHGHIGPGPYPMEIANGQWSGFLHVKTSGTATGSS 125
           G GVSTLCL+YNATG T+ +V  H+WHGHIG  PYP +I NGQW  +LHV TSG A GSS
Sbjct: 61  GNGVSTLCLVYNATGGTLNFVLSHDWHGHIGESPYPQQIDNGQWGAYLHVHTSGAAVGSS 120

Query: 126 AAV------------------------------AYTEIREEGHYNKHDNWNYISNLLYNS 185
           AAV                               YTEIRE  HY  +++WNYI + +  S
Sbjct: 121 AAVVYRGKNEGGTTCDWMFGWSNPWNRWGNDNTVYTEIREYRHYEDNNHWNYIQDKVEGS 180

Query: 186 GVSKSDNWNGCLSTVITGSDTSPIFEAIFTLAEA 189
           G++ SD WNGC+STV TGS TSPI +AI TL  A
Sbjct: 181 GLTHSDTWNGCVSTVATGSSTSPILQAILTLENA 214

The following BLAST results are available for this feature:

BLAST of Lsi06G007330 vs. Swiss-Prot


Match Name	E-value	Identity	Description
JI23_HORVU	8.0e-33	41.06	23 kDa jasmonate-induced protein OS=Hordeum vulgare PE=2 SV=1	[more]

BLAST of Lsi06G007330 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A097BU21_CITLA	1.3e-79	69.95	23 kDa jasmonate-induced protein OS=Citrullus lanatus PE=2 SV=1	[more]
A0A0A0M0F4_CUCSA	4.4e-62	58.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G642550 PE=4 SV=1	[more]
M5X699_PRUPE	3.5e-43	50.00	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020548mg PE=4 SV=1	[more]
A0A0D3HL17_9ORYZ	1.3e-34	43.33	Uncharacterized protein OS=Oryza barthii PE=4 SV=1	[more]
M0T1C4_MUSAM	6.6e-34	42.58	Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1	[more]

BLAST of Lsi06G007330 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Lsi06G007330 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|694188379\|gb\|AIS71930.1\|	1.9e-79	69.95	23 kDa jasmonate-induced protein [Citrullus lanatus]	[more]
gi\|659086035\|ref\|XP_008443732.1\|	4.9e-67	61.14	PREDICTED: 23 kDa jasmonate-induced protein-like [Cucumis melo]	[more]
gi\|700211516\|gb\|KGN66612.1\|	6.3e-62	58.77	hypothetical protein Csa_1G642550 [Cucumis sativus]	[more]
gi\|1009157728\|ref\|XP_015896910.1\|	5.0e-59	58.37	PREDICTED: 23 kDa jasmonate-induced protein-like [Ziziphus jujuba]	[more]
gi\|743780066\|ref\|XP_010920410.1\|	7.9e-57	55.14	PREDICTED: 23 kDa jasmonate-induced protein-like [Elaeis guineensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G007330.1	Lsi06G007330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 43..63 scor
None	No IPR available	PANTHER	PTHR36482	FAMILY NOT NAMED	coord: 7..187 score: 1.8
None	No IPR available	PANTHER	PTHR36482:SF2	SUBFAMILY NOT NAMED	coord: 7..187 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G007330	Cla002541	Watermelon (97103) v1	lsiwmB391
Lsi06G007330	ClCG03G011140	Watermelon (Charleston Gray)	lsiwcgB361
Lsi06G007330	Cla97C03G061600	Watermelon (97103) v2	lsiwmbB362

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G007330	Silver-seed gourd	carlsiB830
Lsi06G007330	Cucumber (Chinese Long) v3	cuclsiB068
Lsi06G007330	Cucumber (Chinese Long) v3	cuclsiB090
Lsi06G007330	Wax gourd	lsiwgoB521
Lsi06G007330	Cucumber (Gy14) v1	cgylsiB640
Lsi06G007330	Cucurbita maxima (Rimu)	cmalsiB128
Lsi06G007330	Cucurbita moschata (Rifu)	cmolsiB118
Lsi06G007330	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G007330	Wild cucumber (PI 183967)	cpilsiB080
Lsi06G007330	Cucumber (Chinese Long) v2	culsiB058
Lsi06G007330	Cucumber (Chinese Long) v2	culsiB082
Lsi06G007330	Melon (DHL92) v3.5.1	lsimeB398
Lsi06G007330	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G007330	Cucumber (Gy14) v2	cgyblsiB076
Lsi06G007330	Melon (DHL92) v3.6.1	lsimedB420