Lsi06G007230 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G007230
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	ATP-binding cassette superfamily
Location	chr06 : 12173347 .. 12180657 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGGGGGGGGGGTTTCGCTCATAACCCTATTTTGGTTTCTTTAGATTTGTGAAGTTTCGATTGCATTGAAACTACTAAGTCAGTAGGAGGCTGATTTTGGACTGGTTGAATCGTGGGTCAGCTTCAAAATCTCAAAATTCATCTACCCTTTAACGGGTCAATCCCGGTAACATGGTTTCTGTATCGGGTTCGGTGTTCTTCCCATTAACTGTACCCAATTGTTCCTCTCGATCGCGTAAAGTATCTGTTCTTGATGCGCACAATTCTTTTTATTGTAAGAAAAAGGACCAGAGAAGGATTGTTTGCAATTGCATTGCGCCTCCGCCGTACTTCAAGAGTGATGGATCATCTGCCGTAAATTCCAATGTATATCATTCACATTTTGATTTGTTTCTGTGTGTTTTTTTTCCTATTTCCTGCGCCCTGTGTATTTGATTGATACTTTCGTGCTTATGATTGTTCCTTGAATTGGTCGCGTCGCTGAAATTTAATAGCTGTGTTTGTGTTCGATACGCGTCATTGAATAGGGGTGCTGTTGTTCTCTCTGATCGATGTTTTAGTATGTCTTGAAACTCTATGATTTTCCCAATTTCTTGCACTTTCTTCCTGTTTAATTGCTTCTGCTGTGGTCCCTGCTCGTCTTGGTCGCAGTTTATATTGGGTTCAGTAGTCCAGTTTATATCTGATTGTTCATAGTGTTTTTTCATTTATTGCCATCTTAGCTATCAATTTAAGCACCCATAACCAGCGATACGACATCTTTGACTCCCTTGCCTTCATTGAGTATATCTTTTTCCTAACTTTAGTTGAAATCTTTAGTTTAATATTTTTGTCCTGTCCTTATGACCATTGACAAAAATAAGTCACTCCTTTAATGAATACTATTTGATTTTTTTGATATATTTATCATTTGTATATTATGGTTCATATTTAACAAGGATTATATTATCAGGACTCGTTTGGATCAGAACATTTAATCCCAGATAATGAGGACAAGGATGAGTCTGATGTTCTCATTGAGTGTAGAAATGTCTACAAATCCTTTGGAGACAAACATATACTGAGAGGTGTGAGCTTCAAGGTGATTCACATTTCTGCATATTTAGTTCATTTCATTTTTCAGTTTTATGCAATTTCTTTCTTTTGATATATAGATATAAGCGATTTCTTTTTGGCCAGAAAAGAAGGTATTAGATGAACATTCAGTTCTTGAGTAAAAGGGGGATATCTAAGTACAAGTGTTCTATGTCGCTTATATATGTGTCTGAATGTGCTACTTTGAATTCTAATTTAATAAAGTTTGCTTAATCTTATTAGTGTTTTTTAAGTTACACTGTTATGGAAATGAAAATATTGTACTGTTTTTTTTTTTATCAGATTATCTAATAAATTGTTGTCGTTGATATAAGTTTTAATCTCATGAAAAAACTGTAAAATAATTCTTGTCGACTCTCCCCCATGGATGTGGTAATCAAATGGAACCTTGTAGGTTCTTGGTAGTCATTGAGTGGAATGAGGTGGAAGGGTTGTGATTGTTGCAGTTCCAAATACATTTTTCTGCTATAAGTGAACTTTCTTTTGAGCCTTCATGGATGTTCCTCTTCCTCTTTTCTTTGGTTTTTTCATGTATATTCATGTCAATGACCATAGCTTTGGAAATGCTCTAGTTGTTTGGTCATCTTTTCTTCAATTTCCAACAATCAACTTAATCATGGAGTCGTGATTCTGGCTGTTGGGTATAGTCTGTTTACAGGGTTTTGACCTGAGGATACAGGTTGTATAACATTTGTTTTTAACCATGCCTTTCCTTGGTTACATAGTGTGACAGATAATGAAAAATGGAGTAACGAAGACTTATACAATGCTTCAAGTTGTTGTTGGATGTTTAATTATTAGAAAAGTTCGTTACATGACACCGAGAGTGTAGGAATGGGACAACTTTTGTAAGATTGATGATTTTAATGCTCTACTGATAGACTCAATAATATAGTAGTTGGATAGGTTGGGTTAGTTTTTTTGTTAGATCTCTATTGACTTTTTGGTGTCTGGGGATAGCCATAAATCTTGAACTTTGTAAGTTTATTTGGAAGAAAAGTTTCTTAGTAAGTTCAGAATCTTCTATTGGTAATGTAATGGGATTTAGGATAACTTGGTTTAATTCCTTGATTAATTCTTTTTTTACTATTTTAGAAATTAATTTCCTTTTAGTTATCCTTTTAGGATTTGTTCTTACATTTTATTCTATATAAATAGAGAATCCTCCCTCTTGTATTAGACGACTTTCATAATAATAAAGATTTGATTAGATTCTTAGAGAGAATTCTCCTTTTTATCTCTTTAGGCTACATCAATTTGGTATCAGAGTAGCCTTATGGGCCAACGTTGACTGCCACTGGTGGAAGACCGGGAAACTCTTGGTGATGCTGATCGCAAGAGGGAGCTTTGTGAGTTGTGCTCGTTGCCAAACAACACACATCTAACTAGGAGGAACCCTTTAAATTCAAGAAGAACGAGAAGAAATTTGAAGAATTATCCAAAAATGGAACTTTATAGTAGAACTAATACATTAAGGGGCAAAAATCATTATTTTGGTTATGGAGAACAATCAAGAAAGGTTGAAACATATTCAAGAAAACCCAAGAATCAGTCCTACAATAATTATTATCAGTCTGTCTTAACAATGTATTTACACAGTAATGACAGTTTTAACAACTAAAAGCTCCTCTCTGGATTACCTTGTATGGAGCAAGCTTGTCTTTAGCCCATGTGGGGAGTTCATGTAAGCTCATAGTAGGCTTGGACTCATCAGGTGTCATCATTTTTGTGTTAGGCTGAAGCACAATAATTGCACAAACACGTTCTCCATAGTCTTTGTCTAGTAATCCCAACGCACAACATTCTATGACAGACAGATGCTGCACAAAGTGATTTGGCTGGTGGTCATTTCATGTTCTTTATACTTCCTTTTTTGTGGTAGGTGTGGGGGTTGTCTTTCACTTTCCATGAGGGAGAGAGAGAGTACAAAGGAGAACGATGGGGTAACCTACAAAATCACTGATTCAATCTCTAATGCTGATAATTTATATCCTCCGACTTTCATGATATCAGTGCTCAGACCTGAAAACAGCCAAGAATGTGGAAAACAGAGTCGGGAATGCTCCTCCCAAAACAAAAGCAAGCAGAACTCGATCGAATAGCGATCAAATGAGAAGGGGCAAGTGAAAAATGACAAATAGGAGTAAAAAAAGAGGTGGGGTAATTAAATGCAGAAGAGTTCATGAAGAAAGGATATGTAAATGGGTATTGGCAATCTGGGATTTTGATTTTGTTTCTCAACTTTTGTGGTTTTGAAATTCAAGTAATGGGAGTTAGTGATGCCATCTTACACAATGGGGTAATGGAAGGAGTTCTCTTCTGGATTCCCCAGAATTAGGGCATACGCATAACAAAGGTCAATACAATACAGATGCGGCCATCAAACATCAAAGGAAAATCAGTGGCATCGCTGCCATTTTTGTGAACTTCTGCTTACCTTCCACCAAGAACTACCGATTCATTTAAGGAATTGATTCACTCGAAGCTATGGCGATTCGGGATAGTTTGGAGATGGCAAAGGAAGCCTACGAGGTTGAAACTTATTCAAGAACACCCAATTTGTACATCAATCCTGAAGTATTGGAGGAAATGAAAAAGAGAGTAAAAGAGATCCGAGGTTTGTTAGGAAAGATGACTCAAAACATGGATCAACTTTCAAAACAATGGCAAGAGTTCAAAAAAGAAATAATTCAAGAAAATCAAAACCAAGAGCTTGTGTTGGATGAAGAAAAATCTGATAGGACTCACACGGAGGTTGCTCAATTCAAACTAGATGATGAGGAACAATTAATCGATGAAAATAAAGATGGAGTTGTTGGAGAAGATGAAGCCACTACAGAGAATGTGTCCAAGATTAATTAACTGAGGCACACAACCAACCACAACTACCTCCACCGCAAGAGAGTAAAGCAAAAATTAACCTTGGCCACCAAGAAAGACAACAAAAGAATCAATAGCACCAATGGTATGCAAGAAATGTTTAAGATTTACCAAGAATCGTTCAAGAACAACCAAGATTAAGGATTTGATTTGATTCTTGGAGAGAATTCTCCTTTTATTTCTTTAGGCTACATCAATTGGTCCATTACCCTTGGTGGTATTATTACTATGGATGTGGCCCATTGGAGAAATTTGATTAGAATCCTCTTGTCAATTGTTGTGTTCTGTGCAGAAATTAGGAGGATTTTGATCGCTTATTCCCTTCCTGCCCCTCTTCTATGAGATTATGGTGGAATATGTTTGAGTATTATTTGTTAGGTCTTATTTTGTTAGATTGGAGACATTATTTCTAGGGTGCTCTCTTTTGTTGGCTTGGCTTTTGTATGCCTCTATATTCTTTCATTTCTTCTCAATGAAAGTTGGTCTTTATACCAAAAAAAAAATGGTGAAATATGTTTGATGTTTCTCACTTCTTAGTGGCCGTTCAGAGGAATACAGGAAAAAAAATGAAGGGTAAAGGAAAGTTGTTTAGCTTTGTTGCATCTTTTTTTTTTCCTTGGGAAACTTTGATTGACAGAAATAGAATACTATTTCATGACGGTGAGAGGCAGCTGGAGGATGTTTGAGATGTAATCATTTGCTTGGTGGTTCTGTTTCTATCCAGTTTTTTCCAGTTCTATAACTACTTTTATCATTGCAAATGAGTAAAATTTTCATGCAATCCCCGTACCTCTACTTCAAGGGTTTTCATCTTTTTTGTATTCCGACAAAATGTGGTTCCTACTTTAAAAAGCAAAAAATTCATCATTAGCTAACTTTCTGACAGTTTAGCAACTTGAAAGAAGAAACAACCTTGGAAGGGGATAAATGGTCAGCTTGTTGTCAGTACAGAAGTATGTATGTTTATATCATATATTCTTTCTTTTATGTGGATTCGCTTCAAAGACACGTGGTGCTGAGAAAGTAGGAAATTTTGGGTTTGATCAATGGTTATTTCCAGGGTTGTTTCCCTTCTCTGTTGTAATTACTAATTGCATCTCATGTAGTGTTTTCTAGCTTTTCTTCAGCTTCATTTGCCACACTACAGAAAAGAATACTAATCACCTTACACCAAGATTCTCACAGCTCTTCTATCATCTTTATCTCTGGTTTTATATTTAGTAATTTTTGTTATCTTTAAAAATATTTCATCTTCTCTCTCATTTTTATTTGTATAGATTAGACATGGAGAAGCTGTGGGAGTAATTGGGCCTTCTGGTACTGGGAAGTCTACAATACTGAAGATCATTGCAGGTCTTCTTTCTCCAGACAAGGTAAATAATTGTCTTTGATTTCACATTGCATTTTGCTGATGTTTAGTTGCACCATACATATTCCAGATTTCCAGGCATTTATCGTTCTCTTAATTGGATTTCTGGTATTGCGAACAGGGAGAGGTATATATTCGAGGTAGAAAGCGAGTTGGTTTGATCGATGATGAGGAGCTATCTGGTCTTCGAATTGGATTGGTTAGAATTGTCTTTAACTTAATATAATTCTAGAAGTTATATGAAAAATGACTTTTTAATAGAAATATGTGACAATACCGTGAGGACAGAAAATATACCTGACTTAATCTAAAAATTGTGAAAAGGTTATTAGGTTCAATTTTAGAAATCGAAGAATTGTAGAAAGCTTTAATAGGTTACCTTTTTGGTGTTTCAAATTCCATTTTCTTTCTACTAATTACTTTCTTTTCTGAATTTCATTATTAAGCAGATGTGATGTTATTAACTGACTTGCTAAATAATAAATCATTTTAACTATTTAACTATAATTTTTTCTTTGAGAAACCCAACTTTCATTTAGGATAAAATGAAAGGATACAAGGCATACAAAAATGACAACCCAACCAGAGAGGCCAAGCACCTAGGTATACGAAAGGGGCCTACAATTCAACATAATCAATGCTTATCAGGGTGCTTACAAAAATCAATCATTACTATAGCTCAAATAGATGTCTTAAACCTAGTTAACAATCACGCCTCCTCCTAGGTCTCTCCTGATCCTTGAAGTGTCTATTATTCCCTTCATCCAAATACTTCAAAGGACAACAAAGAGACAGGCCCGCCACAAAAACCAACCCTGAAAAGGCTAATATGTTGAAGAATCTCTTTAACATAGAGTTACAACCTCTGCTCCTATTTAAACGTAAATATAAAATCCAATCTATGTAATAAATGTAGATTTTTTTTAATTAATTGAAAATATAGTACATGAATCAGGCGGACAAGTAAACTTTCATATTTGAATATGTAAAATTTTTTCTGAACAACTATTTTGACACTATTATGTCATTAGAATACTATCAAGATACTATGATGTAATAGGATTTAGGATAACTTGGTTTAATTCTTTTATTACTATTTTAGAAATTAGTTTCCTTTTAGTTATCCTTTTAGGATTCTTTCTTGCATTTTATTCTCTATAAATAGAGAATCCTCCCTCTTGTATTAGACACTTTTTATAATAATAAAGATTTGATTGGATTCTTGGAGAGAATTCTCCTTTTATCTCTTTAGGCTACATCAATTTGGTATCAAAGCAGCTGTTTGGGTCAATGTTGATTGCTGCCGGTGAAAGATTAAGAAACTCTTGGCGACGCCGATCACAAGAGGGAACTTCGTGAGTTGTGCTCGTTGCCAAACAACACACACCTAACTAGGGGGAACCCTTTAAATTCAAGAAGATCGAGAAGAAATTTGAAGAATCATCCAAGAATGGAATTTTATAGTAGAACTAATACATTAAGGGGCGAAAATCATTATTTTGGTTATGGAGAATGACCAAGGAAGGTTGAAACATATTCAAGAAAACCCAAGAATCAGTCCTACAACAATTATGAGGTTAAAACTTATTCAAGAACACTCAATTTGTACATCAATCCTGAAGTATTGGAGGAAATGAAGAAGGGAGTAAAAGAGATCCAAGGTTTGTTAGGAAAGATGACTCAAAACATGGATGAACTTTCAAAACAATGGCAAGAGTTCAAAAAAGAAATAATTCAAGAAAATCAAAATCAAGAACTTGTGTTGGAAGAAGAAAAAGTCGATGGGACTGGCACGAAGGTTGCTCATTTTGAACCAGTTCATGAGGAACAATTAATCGATGAAAACAAAGATGGAGGTGTTGAAGAAGATGAAGCCACTGTAGAGAATGTGTCCATTCGGTTAGATCAATTAACTGAGGCACACAACCAACCACAACCACCTCCATCGCAAGAGAATAGAGCATAA

mRNA sequence

GGGGGGGGGGGGGTTTCGCTCATAACCCTATTTTGGTTTCTTTAGATTTGTGAAGTTTCGATTGCATTGAAACTACTAAGTCAGTAGGAGGCTGATTTTGGACTGGTTGAATCGTGGGTCAGCTTCAAAATCTCAAAATTCATCTACCCTTTAACGGGTCAATCCCGGTAACATGGTTTCTGTATCGGGTTCGGTGTTCTTCCCATTAACTGTACCCAATTGTTCCTCTCGATCGCGTAAAGTATCTGTTCTTGATGCGCACAATTCTTTTTATTGTAAGAAAAAGGACCAGAGAAGGATTGTTTGCAATTGCATTGCGCCTCCGCCGTACTTCAAGAGTGATGGATCATCTGCCGTAAATTCCAATGACTCGTTTGGATCAGAACATTTAATCCCAGATAATGAGGACAAGGATGAGTCTGATGTTCTCATTGAGTGTAGAAATGTCTACAAATCCTTTGGAGACAAACATATACTGAGAGGTGTGAGCTTCAAGATTAGACATGGAGAAGCTGTGGGAGTAATTGGGCCTTCTGGTACTGGGAAGTCTACAATACTGAAGATCATTGCAGGTCTTCTTTCTCCAGACAAGGGAGAGGTATATATTCGAGGTAGAAAGCGAGTTGGTTTGATCGATGATGAGGAGCTATCTGGTCTTCGAATTGGATTGGTTGCTCATTTTGAACCAGTTCATGAGGAACAATTAATCGATGAAAACAAAGATGGAGGTGTTGAAGAAGATGAAGCCACTGTAGAGAATGTGTCCATTCGGTTAGATCAATTAACTGAGGCACACAACCAACCACAACCACCTCCATCGCAAGAGAATAGAGCATAA

Coding sequence (CDS)

ATGGTTTCTGTATCGGGTTCGGTGTTCTTCCCATTAACTGTACCCAATTGTTCCTCTCGATCGCGTAAAGTATCTGTTCTTGATGCGCACAATTCTTTTTATTGTAAGAAAAAGGACCAGAGAAGGATTGTTTGCAATTGCATTGCGCCTCCGCCGTACTTCAAGAGTGATGGATCATCTGCCGTAAATTCCAATGACTCGTTTGGATCAGAACATTTAATCCCAGATAATGAGGACAAGGATGAGTCTGATGTTCTCATTGAGTGTAGAAATGTCTACAAATCCTTTGGAGACAAACATATACTGAGAGGTGTGAGCTTCAAGATTAGACATGGAGAAGCTGTGGGAGTAATTGGGCCTTCTGGTACTGGGAAGTCTACAATACTGAAGATCATTGCAGGTCTTCTTTCTCCAGACAAGGGAGAGGTATATATTCGAGGTAGAAAGCGAGTTGGTTTGATCGATGATGAGGAGCTATCTGGTCTTCGAATTGGATTGGTTGCTCATTTTGAACCAGTTCATGAGGAACAATTAATCGATGAAAACAAAGATGGAGGTGTTGAAGAAGATGAAGCCACTGTAGAGAATGTGTCCATTCGGTTAGATCAATTAACTGAGGCACACAACCAACCACAACCACCTCCATCGCAAGAGAATAGAGCATAA

Protein sequence

MVSVSGSVFFPLTVPNCSSRSRKVSVLDAHNSFYCKKKDQRRIVCNCIAPPPYFKSDGSSAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLIDENKDGGVEEDEATVENVSIRLDQLTEAHNQPQPPPSQENRA

Homology

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BLAST of Lsi06G007230 vs. Swiss-Prot
Match: TGD3_ARATH (Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic OS=Arabidopsis thaliana GN=TGD3 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 8.4e-42
Identity = 88/143 (61.54%), Postives = 109/143 (76.22%), Query Frame = 1


Query: 40  QRRIVCNCIAPPPYFKSDGSSAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDK 99
           +R++ C CIAPP    +D +   +   S G   +  +   +++SDVLIECR+VYKSFG+K
Sbjct: 40  RRKVSCCCIAPPQNLDNDATKFDSLTKSGGG--MCKERGLENDSDVLIECRDVYKSFGEK 99

Query: 100 HILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEEL 159
           HIL+GVSFKIRHGEAVGVIGPSGTGKSTILKI+AGLL+PDKGEVYIRG+KR GLI DEE+
Sbjct: 100 HILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLLAPDKGEVYIRGKKRAGLISDEEI 159

Query: 160 SGLRIGLVAHFEPVHEEQLIDEN 183
           SGLRIGLV     + +   + EN
Sbjct: 160 SGLRIGLVFQSAALFDSLSVREN 180

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BLAST of Lsi06G007230 vs. Swiss-Prot
Match: NODI_SINFN (Nod factor export ATP-binding protein I OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) GN=nodI PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.8e-13
Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = 1


Query: 72  HLIPDNE-DKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGPSGTGKSTILK 131
           H   DN   + +SDV IE  NV KS+GDK ++  +SF I  GE  G++GP+G GKST+ +
Sbjct: 29  HSNADNSLSRSKSDVAIELTNVSKSYGDKVVVDQLSFTITSGECFGLLGPNGAGKSTVSR 88

Query: 132 IIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLIDEN 183
           ++ GL  PD+G + + G     +     L+  RIG+V  F+ +  E    EN
Sbjct: 89  LVLGLAPPDEGTITVLGEP---VPARARLARSRIGVVPQFDTLDREFTAREN 137

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BLAST of Lsi06G007230 vs. Swiss-Prot
Match: NODI_RHIME (Nod factor export ATP-binding protein I OS=Rhizobium meliloti (strain 1021) GN=nodI PE=3 SV=3)

HSP 1 Score: 75.5 bits (184), Expect = 8.2e-13
Identity = 38/98 (38.78%), Postives = 61/98 (62.24%), Query Frame = 1


Query: 85  VLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVY 144
           V I+  +V KS+GDK ++ G+SF +  GE  G++GP+G GKSTI ++I G+ +P  GE+ 
Sbjct: 35  VAIDVASVTKSYGDKPVINGLSFTVAAGECFGLLGPNGAGKSTITRMILGMTTPGTGEIT 94

Query: 145 IRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLIDEN 183
           + G   V +     L+ +RIG+V  F+ +  E  + EN
Sbjct: 95  VLG---VPVPSRARLARMRIGVVPQFDNLDLEFTVREN 129

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BLAST of Lsi06G007230 vs. Swiss-Prot
Match: NODI_RHIS3 (Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain N33) GN=nodI PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.1e-12
Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 1


Query: 83  SDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGE 142
           S V I+   V KSFGDK ++ G+SF +  GE  G++GP+G GKSTI +++ G+  PD G+
Sbjct: 2   SKVAIDLAGVKKSFGDKLVVNGLSFTVASGECFGLLGPNGAGKSTIARMLLGMTVPDAGK 61

Query: 143 VYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLIDEN 183
           + + G + VG      L+   IG+V  F+ + +E  + EN
Sbjct: 62  ITVLG-EPVGA--RSRLARKSIGVVPQFDNLDQEFTVREN 98

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BLAST of Lsi06G007230 vs. Swiss-Prot
Match: NODI_BRADU (Nod factor export ATP-binding protein I OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN=nodI PE=3 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 7.0e-12
Identity = 35/100 (35.00%), Postives = 61/100 (61.00%), Query Frame = 1


Query: 83  SDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGE 142
           S++ I+   V KSFGDK I+  +SF +  GE  G++GP+G GKSTI +++ G++SPD+G+
Sbjct: 4   SNMAIDLVGVRKSFGDKVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMISPDRGK 63

Query: 143 VYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLIDEN 183
           + +       +      + +R+G+V  F+ +  E  + EN
Sbjct: 64  ITVLDEP---VPSRARAARVRVGVVPQFDNLEPEFTVREN 100

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BLAST of Lsi06G007230 vs. TrEMBL
Match: A0A0A0LY39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G659590 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 1.6e-79
Identity = 161/207 (77.78%), Postives = 175/207 (84.54%), Query Frame = 1


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSVLDAHNSFYCKKKDQRRIV-CNCIAPPPYFKSDGS 60
           MVSVSGSVFFPLTVP+CSSRSRKV+V+DAHNSF CK KDQRRIV CNCIAPPPYFKSD S
Sbjct: 1   MVSVSGSVFFPLTVPSCSSRSRKVAVIDAHNSFCCKIKDQRRIVACNCIAPPPYFKSDES 60

Query: 61  SAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIG 120
           SAVNSNDSF SEHL  +NEDK+ESDVLIECRNV+KSFG+KHILRGVSFKIRHGEAVGVIG
Sbjct: 61  SAVNSNDSFRSEHLSSENEDKNESDVLIECRNVHKSFGEKHILRGVSFKIRHGEAVGVIG 120

Query: 121 PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLI 180
           PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLV     + +   +
Sbjct: 121 PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVFQSAALFDSLTV 180

Query: 181 DENKDGGVEEDEATVENVSIRLDQLTE 207
            +N            EN S+  DQ++E
Sbjct: 181 RQN------VGFLLYENSSLSEDQISE 201

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BLAST of Lsi06G007230 vs. TrEMBL
Match: B9RFV1_RICCO (Abc transporter, putative OS=Ricinus communis GN=RCOM_1437480 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.3e-53
Identity = 120/211 (56.87%), Postives = 154/211 (72.99%), Query Frame = 1


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSV--LDAHNSF-YCKKKDQRRIVCNCIAPPPYFKSD 60
           MVS+SGS  FP ++ + S+R  + SV   D  NSF Y ++K+QR++VC+C+APP    SD
Sbjct: 6   MVSLSGSTLFPASIAHGSTRFTRFSVWSADTVNSFCYKQRKEQRKVVCSCMAPPRNISSD 65

Query: 61  GSSAVNSNDSFGSEHL--IPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAV 120
             SA   NDS+ SE L  + + E++ +SD+LIECR+VYKSFG+KHILRGVSFKIRHGEAV
Sbjct: 66  ECSATRYNDSYKSEQLRKVLEPENESDSDILIECRDVYKSFGEKHILRGVSFKIRHGEAV 125

Query: 121 GVIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHE 180
           G+IGPSGTGKSTILKI+AGLL+PDKGEVYIRGRKR GLI D++LSGLRIGLV     + +
Sbjct: 126 GIIGPSGTGKSTILKIMAGLLAPDKGEVYIRGRKRDGLISDQDLSGLRIGLVFQSAALFD 185

Query: 181 EQLIDENKDGGVEEDEATVENVSIRLDQLTE 207
              + EN            EN S+R +Q++E
Sbjct: 186 SLTVREN------VGFLLYENSSMREEQISE 210

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BLAST of Lsi06G007230 vs. TrEMBL
Match: V4SMC4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012081mg PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.4e-51
Identity = 113/184 (61.41%), Postives = 137/184 (74.46%), Query Frame = 1


Query: 2   VSVSGSVFFPLTVPNCSSRSRKVSVLDAH--NSF-YCKKKDQRRIVCNCIAPPPYFKSDG 61
           +S SGS+ FPL   + SSR  +++  D    NSF Y  K++QR++VC C+APP    +DG
Sbjct: 4   LSSSGSLLFPLATKSVSSRLSRLANSDKKPVNSFCYKAKEEQRKVVCACVAPPRDLGTDG 63

Query: 62  SSAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVI 121
             A   NDS  SE++    E +D+ DVLI+CRNVYKSFG+KHILRGVSFKIRHGEAVG+I
Sbjct: 64  FPATKFNDSSKSENVNTLFEPEDDGDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGII 123

Query: 122 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQL 181
           GPSGTGKSTILKIIAGLL+PDKGEVYIRGRKR GLI DEE+SGLRIGLV     + +   
Sbjct: 124 GPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLT 183

Query: 182 IDEN 183
           + EN
Sbjct: 184 VREN 187

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BLAST of Lsi06G007230 vs. TrEMBL
Match: A0A067DIV3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016804mg PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.4e-51
Identity = 114/184 (61.96%), Postives = 136/184 (73.91%), Query Frame = 1


Query: 2   VSVSGSVFFPLTVPNCSSRSRKV--SVLDAHNSFYCK-KKDQRRIVCNCIAPPPYFKSDG 61
           +S SGS+ FPL   + SSR   +  S     NSFY K K++QR++VC C+APP    +DG
Sbjct: 4   LSSSGSLLFPLATKSVSSRLSTLANSGKKPINSFYYKAKEEQRKVVCACVAPPRDLGTDG 63

Query: 62  SSAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVI 121
             A   NDS  SE++    E +D+ DVLI+CRNVYKSFG+KHILRGVSFKIRHGEAVG+I
Sbjct: 64  FPATKFNDSSKSENVNTLFEPEDDGDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGII 123

Query: 122 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQL 181
           GPSGTGKSTILKIIAGLL+PDKGEVYIRGRKR GLI DEE+SGLRIGLV     + +   
Sbjct: 124 GPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLT 183

Query: 182 IDEN 183
           + EN
Sbjct: 184 VREN 187

[Close]

BLAST of Lsi06G007230 vs. TrEMBL
Match: A0A067DSA7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016804mg PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.4e-51
Identity = 114/184 (61.96%), Postives = 136/184 (73.91%), Query Frame = 1


Query: 2   VSVSGSVFFPLTVPNCSSRSRKV--SVLDAHNSFYCK-KKDQRRIVCNCIAPPPYFKSDG 61
           +S SGS+ FPL   + SSR   +  S     NSFY K K++QR++VC C+APP    +DG
Sbjct: 4   LSSSGSLLFPLATKSVSSRLSTLANSGKKPINSFYYKAKEEQRKVVCACVAPPRDLGTDG 63

Query: 62  SSAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVI 121
             A   NDS  SE++    E +D+ DVLI+CRNVYKSFG+KHILRGVSFKIRHGEAVG+I
Sbjct: 64  FPATKFNDSSKSENVNTLFEPEDDGDVLIDCRNVYKSFGEKHILRGVSFKIRHGEAVGII 123

Query: 122 GPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQL 181
           GPSGTGKSTILKIIAGLL+PDKGEVYIRGRKR GLI DEE+SGLRIGLV     + +   
Sbjct: 124 GPSGTGKSTILKIIAGLLAPDKGEVYIRGRKRAGLISDEEISGLRIGLVFQSAALFDSLT 183

Query: 182 IDEN 183
           + EN
Sbjct: 184 VREN 187

[Close]

BLAST of Lsi06G007230 vs. TAIR10
Match: AT1G65410.1 (AT1G65410.1 non-intrinsic ABC protein 11)

HSP 1 Score: 171.8 bits (434), Expect = 4.8e-43
Identity = 88/143 (61.54%), Postives = 109/143 (76.22%), Query Frame = 1


Query: 40  QRRIVCNCIAPPPYFKSDGSSAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDK 99
           +R++ C CIAPP    +D +   +   S G   +  +   +++SDVLIECR+VYKSFG+K
Sbjct: 40  RRKVSCCCIAPPQNLDNDATKFDSLTKSGGG--MCKERGLENDSDVLIECRDVYKSFGEK 99

Query: 100 HILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEEL 159
           HIL+GVSFKIRHGEAVGVIGPSGTGKSTILKI+AGLL+PDKGEVYIRG+KR GLI DEE+
Sbjct: 100 HILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLLAPDKGEVYIRGKKRAGLISDEEI 159

Query: 160 SGLRIGLVAHFEPVHEEQLIDEN 183
           SGLRIGLV     + +   + EN
Sbjct: 160 SGLRIGLVFQSAALFDSLSVREN 180

[Close]

BLAST of Lsi06G007230 vs. TAIR10
Match: AT4G33460.1 (AT4G33460.1 ABC transporter family protein)

HSP 1 Score: 58.9 bits (141), Expect = 4.5e-09
Identity = 30/75 (40.00%), Postives = 46/75 (61.33%), Query Frame = 1


Query: 80  KDESDVLIECRNVYKSFGDKH-----ILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAG 139
           K   +V +ECRN+  S   +      ILR  SF+I  G+   ++GP+G GKST+LKI+AG
Sbjct: 33  KFSDNVAVECRNLCFSVSTRQGISVPILRDCSFRIPSGQLWMILGPNGCGKSTLLKILAG 92

Query: 140 LLSPDKGEVYIRGRK 150
           +++P  G V++   K
Sbjct: 93  VVNPSSGTVFVEKPK 107

[Close]

BLAST of Lsi06G007230 vs. TAIR10
Match: AT5G64840.1 (AT5G64840.1 general control non-repressible 5)

HSP 1 Score: 57.0 bits (136), Expect = 1.7e-08
Identity = 24/60 (40.00%), Postives = 38/60 (63.33%), Query Frame = 1


Query: 86  LIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVYI 145
           ++  +N+   F DK + +  +  I  GE + ++GP+G GKST+LK+I GL  P KGEV +
Sbjct: 424 VVNVKNIDFGFEDKMLFKKANLSIERGEKIAILGPNGCGKSTLLKLIMGLEKPVKGEVIL 483

[Close]

BLAST of Lsi06G007230 vs. TAIR10
Match: AT5G09930.1 (AT5G09930.1 ABC transporter family protein)

HSP 1 Score: 55.8 bits (133), Expect = 3.8e-08
Identity = 25/60 (41.67%), Postives = 37/60 (61.67%), Query Frame = 1


Query: 86  LIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVYI 145
           ++  +N+   F DK +    +  I  GE V +IGP+G GKST+LK+I GL  P +GEV +
Sbjct: 410 VVTVKNLVFGFDDKMLFNKANLAIERGEKVAIIGPNGCGKSTLLKLIMGLEKPMRGEVIL 469

[Close]

BLAST of Lsi06G007230 vs. TAIR10
Match: AT3G62150.1 (AT3G62150.1 P-glycoprotein 21)

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07
Identity = 43/116 (37.07%), Postives = 60/116 (51.72%), Query Frame = 1


Query: 87  IECRNV---YKSFGDKHILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEV 146
           IE  NV   Y +  ++ I RG S  I  G  V ++G SG+GKST++ +I     P  GEV
Sbjct: 403 IELNNVNFSYPARPEEQIFRGFSLSISSGSTVALVGQSGSGKSTVVSLIERFYDPQSGEV 462

Query: 147 YIRGRKRVGLIDDEELSGLR--IGLVAHFEPVHEEQLIDENKDGGVEEDEATVENV 198
            I G      + + +L  +R  IGLV+  EPV     I EN   G  ++ ATVE +
Sbjct: 463 RIDGIN----LKEFQLKWIRSKIGLVSQ-EPVLFTSSIKENIAYG--KENATVEEI 511

[Close]

BLAST of Lsi06G007230 vs. NCBI nr
Match: gi|659086003|ref|XP_008443718.1| (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 307.8 bits (787), Expect = 1.6e-80
Identity = 162/207 (78.26%), Postives = 175/207 (84.54%), Query Frame = 1


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSVLDAHNSFYCKKKDQRRIV-CNCIAPPPYFKSDGS 60
           MVS+SGSVFFPLTVPNCSSRSRKV+VLDAHNSF CK KDQRRIV CNCIAPPPYFKSD S
Sbjct: 1   MVSISGSVFFPLTVPNCSSRSRKVAVLDAHNSFCCKIKDQRRIVACNCIAPPPYFKSDES 60

Query: 61  SAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIG 120
           SAVNSNDSF SEHL  +NEDKDESDVLIECRNV+KSFG+KHILRGVSFKIRHGEAVGVIG
Sbjct: 61  SAVNSNDSFRSEHLSSENEDKDESDVLIECRNVHKSFGEKHILRGVSFKIRHGEAVGVIG 120

Query: 121 PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLI 180
           PSGTGKSTILKIIAGLLSPDKGEVYIRGRKR+GLIDDEELSGLRIGLV     + +   +
Sbjct: 121 PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRIGLIDDEELSGLRIGLVFQSAALFDSLTV 180

Query: 181 DENKDGGVEEDEATVENVSIRLDQLTE 207
            +N            EN S+  DQ++E
Sbjct: 181 RQN------VGFLLYENSSLSEDQISE 201

[Close]

BLAST of Lsi06G007230 vs. NCBI nr
Match: gi|449449615|ref|XP_004142560.1| (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 303.9 bits (777), Expect = 2.3e-79
Identity = 161/207 (77.78%), Postives = 175/207 (84.54%), Query Frame = 1


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSVLDAHNSFYCKKKDQRRIV-CNCIAPPPYFKSDGS 60
           MVSVSGSVFFPLTVP+CSSRSRKV+V+DAHNSF CK KDQRRIV CNCIAPPPYFKSD S
Sbjct: 1   MVSVSGSVFFPLTVPSCSSRSRKVAVIDAHNSFCCKIKDQRRIVACNCIAPPPYFKSDES 60

Query: 61  SAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIG 120
           SAVNSNDSF SEHL  +NEDK+ESDVLIECRNV+KSFG+KHILRGVSFKIRHGEAVGVIG
Sbjct: 61  SAVNSNDSFRSEHLSSENEDKNESDVLIECRNVHKSFGEKHILRGVSFKIRHGEAVGVIG 120

Query: 121 PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLI 180
           PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLV     + +   +
Sbjct: 121 PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVFQSAALFDSLTV 180

Query: 181 DENKDGGVEEDEATVENVSIRLDQLTE 207
            +N            EN S+  DQ++E
Sbjct: 181 RQN------VGFLLYENSSLSEDQISE 201

[Close]

BLAST of Lsi06G007230 vs. NCBI nr
Match: gi|223548581|gb|EEF50072.1| (abc transporter, putative [Ricinus communis])

HSP 1 Score: 216.5 bits (550), Expect = 4.8e-53
Identity = 120/211 (56.87%), Postives = 154/211 (72.99%), Query Frame = 1


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSV--LDAHNSF-YCKKKDQRRIVCNCIAPPPYFKSD 60
           MVS+SGS  FP ++ + S+R  + SV   D  NSF Y ++K+QR++VC+C+APP    SD
Sbjct: 6   MVSLSGSTLFPASIAHGSTRFTRFSVWSADTVNSFCYKQRKEQRKVVCSCMAPPRNISSD 65

Query: 61  GSSAVNSNDSFGSEHL--IPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAV 120
             SA   NDS+ SE L  + + E++ +SD+LIECR+VYKSFG+KHILRGVSFKIRHGEAV
Sbjct: 66  ECSATRYNDSYKSEQLRKVLEPENESDSDILIECRDVYKSFGEKHILRGVSFKIRHGEAV 125

Query: 121 GVIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHE 180
           G+IGPSGTGKSTILKI+AGLL+PDKGEVYIRGRKR GLI D++LSGLRIGLV     + +
Sbjct: 126 GIIGPSGTGKSTILKIMAGLLAPDKGEVYIRGRKRDGLISDQDLSGLRIGLVFQSAALFD 185

Query: 181 EQLIDENKDGGVEEDEATVENVSIRLDQLTE 207
              + EN            EN S+R +Q++E
Sbjct: 186 SLTVREN------VGFLLYENSSMREEQISE 210

[Close]

BLAST of Lsi06G007230 vs. NCBI nr
Match: gi|1000980959|ref|XP_002512620.2| (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic [Ricinus communis])

HSP 1 Score: 216.5 bits (550), Expect = 4.8e-53
Identity = 120/211 (56.87%), Postives = 154/211 (72.99%), Query Frame = 1


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSV--LDAHNSF-YCKKKDQRRIVCNCIAPPPYFKSD 60
           MVS+SGS  FP ++ + S+R  + SV   D  NSF Y ++K+QR++VC+C+APP    SD
Sbjct: 20  MVSLSGSTLFPASIAHGSTRFTRFSVWSADTVNSFCYKQRKEQRKVVCSCMAPPRNISSD 79

Query: 61  GSSAVNSNDSFGSEHL--IPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAV 120
             SA   NDS+ SE L  + + E++ +SD+LIECR+VYKSFG+KHILRGVSFKIRHGEAV
Sbjct: 80  ECSATRYNDSYKSEQLRKVLEPENESDSDILIECRDVYKSFGEKHILRGVSFKIRHGEAV 139

Query: 121 GVIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHE 180
           G+IGPSGTGKSTILKI+AGLL+PDKGEVYIRGRKR GLI D++LSGLRIGLV     + +
Sbjct: 140 GIIGPSGTGKSTILKIMAGLLAPDKGEVYIRGRKRDGLISDQDLSGLRIGLVFQSAALFD 199

Query: 181 EQLIDENKDGGVEEDEATVENVSIRLDQLTE 207
              + EN            EN S+R +Q++E
Sbjct: 200 SLTVREN------VGFLLYENSSMREEQISE 224

[Close]

BLAST of Lsi06G007230 vs. NCBI nr
Match: gi|645223027|ref|XP_008218435.1| (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic [Prunus mume])

HSP 1 Score: 211.1 bits (536), Expect = 2.0e-51
Identity = 114/187 (60.96%), Postives = 136/187 (72.73%), Query Frame = 1


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSVLDAHNSFYCKKKDQ-----RRIVCNCIAPPPYFK 60
           MVS+S S+ FPLT  +  SRS    V  A  + +C   D+     R ++C C+APPP  +
Sbjct: 1   MVSLSNSLLFPLTTSSGFSRS----VRFARTTNWCSTSDKQKGEPRNVLCACMAPPPNLR 60

Query: 61  SDGSSAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAV 120
           SD S A    DSF SE+L    E +D+SDVLIECR+VYKSFG+KHILRGVSFKIRHGEAV
Sbjct: 61  SDESFAAKFEDSFKSENLSTVREPEDDSDVLIECRDVYKSFGEKHILRGVSFKIRHGEAV 120

Query: 121 GVIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHE 180
           G+IGPSGTGKST+LKIIAGLL+PDKGEVYIRGRKR GLI DEE+SGLRIGLV     + +
Sbjct: 121 GIIGPSGTGKSTVLKIIAGLLAPDKGEVYIRGRKRDGLISDEEISGLRIGLVFQSAALFD 180

Query: 181 EQLIDEN 183
              + EN
Sbjct: 181 SLNVREN 183

The following BLAST results are available for this feature:

BLAST of Lsi06G007230 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TGD3_ARATH	8.4e-42	61.54	Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic OS=Arabidopsis thaliana GN=...	[more]
NODI_SINFN	4.8e-13	38.39	Nod factor export ATP-binding protein I OS=Sinorhizobium fredii (strain NBRC 101...	[more]
NODI_RHIME	8.2e-13	38.78	Nod factor export ATP-binding protein I OS=Rhizobium meliloti (strain 1021) GN=n...	[more]
NODI_RHIS3	4.1e-12	39.00	Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain N33) GN=nodI PE...	[more]
NODI_BRADU	7.0e-12	35.00	Nod factor export ATP-binding protein I OS=Bradyrhizobium diazoefficiens (strain...	[more]

BLAST of Lsi06G007230 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LY39_CUCSA	1.6e-79	77.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G659590 PE=4 SV=1	[more]
B9RFV1_RICCO	3.3e-53	56.87	Abc transporter, putative OS=Ricinus communis GN=RCOM_1437480 PE=4 SV=1	[more]
V4SMC4_9ROSI	1.4e-51	61.41	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012081mg PE=4 SV=1	[more]
A0A067DIV3_CITSI	2.4e-51	61.96	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016804mg PE=4 SV=1	[more]
A0A067DSA7_CITSI	2.4e-51	61.96	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g016804mg PE=4 SV=1	[more]

BLAST of Lsi06G007230 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G65410.1	4.8e-43	61.54	non-intrinsic ABC protein 11	[more]
AT4G33460.1	4.5e-09	40.00	ABC transporter family protein	[more]
AT5G64840.1	1.7e-08	40.00	general control non-repressible 5	[more]
AT5G09930.1	3.8e-08	41.67	ABC transporter family protein	[more]
AT3G62150.1	1.1e-07	37.07	P-glycoprotein 21	[more]

BLAST of Lsi06G007230 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659086003\|ref\|XP_008443718.1\|	1.6e-80	78.26	PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X1 [Cucu...	[more]
gi\|449449615\|ref\|XP_004142560.1\|	2.3e-79	77.78	PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X1 [Cucu...	[more]
gi\|223548581\|gb\|EEF50072.1\|	4.8e-53	56.87	abc transporter, putative [Ricinus communis]	[more]
gi\|1000980959\|ref\|XP_002512620.2\|	4.8e-53	56.87	PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic [Ricinus communi...	[more]
gi\|645223027\|ref\|XP_008218435.1\|	2.0e-51	60.96	PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016887	ATPase activity
GO:0005524	ATP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR003439	ABC_transporter-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044765	single-organism transport
biological_process	GO:0006869	lipid transport
biological_process	GO:0008152	metabolic process
biological_process	GO:1902358	sulfate transmembrane transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0015419	ATPase-coupled sulfate transmembrane transporter activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G007230.1	Lsi06G007230.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003439	ABC transporter-like	PFAM	PF00005	ABC_tran	coord: 102..204 score: 7.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 77..187 score: 3.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 82..156 score: 5.33
None	No IPR available	unknown	Coil	Coil	coord: 187..207 scor
None	No IPR available	PANTHER	PTHR24220	FAMILY NOT NAMED	coord: 88..167 score: 4.2
None	No IPR available	PANTHER	PTHR24220:SF441	PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC	coord: 88..167 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G007230	Csa1G659590	Cucumber (Chinese Long) v2	culsiB082
Lsi06G007230	CSPI01G32470	Wild cucumber (PI 183967)	cpilsiB080
Lsi06G007230	CmoCh11G009690	Cucurbita moschata (Rifu)	cmolsiB118
Lsi06G007230	Cla009580	Watermelon (97103) v1	lsiwmB399
Lsi06G007230	ClCG03G010900	Watermelon (Charleston Gray)	lsiwcgB365
Lsi06G007230	Cla97C03G061450	Watermelon (97103) v2	lsiwmbB366
Lsi06G007230	Cp4.1LG18g02680	Cucurbita pepo (Zucchini)	cpelsiB299
Lsi06G007230	Cp4.1LG00g01610	Cucurbita pepo (Zucchini)	cpelsiB017
Lsi06G007230	CsGy1G031360	Cucumber (Gy14) v2	cgyblsiB076
Lsi06G007230	Carg16452	Silver-seed gourd	carlsiB830
Lsi06G007230	CsaV3_1G044650	Cucumber (Chinese Long) v3	cuclsiB090

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G007230	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G007230	Melon (DHL92) v3.6.1	lsimedB420
Lsi06G007230	Cucumber (Chinese Long) v3	cuclsiB068
Lsi06G007230	Watermelon (97103) v2	lsiwmbB362
Lsi06G007230	Wax gourd	lsiwgoB521
Lsi06G007230	Cucumber (Gy14) v1	cgylsiB573
Lsi06G007230	Cucurbita maxima (Rimu)	cmalsiB073
Lsi06G007230	Cucurbita maxima (Rimu)	cmalsiB128
Lsi06G007230	Cucurbita moschata (Rifu)	cmolsiB059
Lsi06G007230	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G007230	Cucumber (Chinese Long) v2	culsiB058
Lsi06G007230	Melon (DHL92) v3.5.1	lsimeB398
Lsi06G007230	Watermelon (Charleston Gray)	lsiwcgB361
Lsi06G007230	Watermelon (97103) v1	lsiwmB391