Lsi06G006720 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G006720
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionAcetolactate synthase small subunit, putative, expressed
Locationchr06 : 10419824 .. 10426999 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGCTATTTATTTTACCTTTAAACTCTTTAGATATTTCAATTTATCAGGTAGAAGATATCTCAAGAGAGCCCCAAGTAGAGCGTGAGCTGGTGCTTATGAAACTCAATGCAGATTCAAAAACTCGTGCTGAGGTGACGACTTGCATTATGTTTTTAATTGTATTTTGATATGCTTGATGAAAATAACCATTTTGGTATTGATTAAGAAATATATTTTTAAATTCTAATTCCTGTTTCTGATCGTGACAACCTTTTAGAGTATTATATTCCCTCCCTGGTAGGACCTCTGATTCTTCTTTCCTAATTGTCTTAGAAGGCACAGTTTCTCATTAAAAAAACCTAATATCCTTAGTTGAGAATTATTAAAACTTCCAATTTCTGTCACTTCATCATCACCTTCAACTTTCGATCGGTCTTATAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTTTTTTTTTTACAGATAATGTGGTTAGTAGACATATTCAGAGGAAAAATTGTGGATATTTCAGAACATTCAGTGACTGTTGAGGTAACTACTTCCAGATTTTTCTGAATATTCATTTGTTGCATGGTGGACGACTAGTCTTCTATTTGGATATTAGCATCTTATCACAGAAAAACACATTTCAATATCTCAAAAGTATATTTTCCCTTCATTAATTTAAGATCAATTCTACTATCTTTTTTAATGTAAAATTAATATTTTTTTATTAAGAAAATTTATATTTGCAAGTCTGAGAGATGGGAGATTCTCAGTTAGTAAAAAAAAGTTGAGAATGGGGTTTAAGGTTCTTTCACATCTTCTTTTACGAGTTGATTTCGTTATTTACCATGGATTCTCGAAGCTGTTTGTTAAAAAGAAGTTTTTATTAATCTGGTTAGGTAATGAAATAATTGGAACAGAATAGTAGATTCTATCACTTAACTTGCATTGGACTTGGATTCAGTGAGGTTAAAGTTGGGTTTAGAAGAAGCTAATTCAATTTTGGTGGAGTGCGGACCGATTATGCCATCCAATGAAGGTGCAAGTTGTTTTGTGGTTCCTTCTGGTTCTGATACTGAAAGGAGAGGATTAATGGTTCTTTGGAAAACGATTAGGCTTTTCCTATAGAAATATTCAAAATGAGTTATATGTTTTAAAAAATAATTATAATATATCCTTCTTATGAAATTACTATACTAACTATATGTAAAAGGTGCTATTATTGGAGAATTTTTACATGCCCATTTTACCCTTCATTTTTTAATGTCTACCTATTTTACCCTCAATTTTAATAATTGATTATTAATAGTTCATTTTAAATTATAATTAAAGTAAAAATCATTTTATAATTAATGAATAGTAATTAACCATCATGGGTTGACCTAGTTGTCAAAAAGGGCCATGGGTATATTGTTGATACAAAAAGGGCTGTGGCTTTAGAGGGAATGTGTTCAGTTCAGTCCATGGTGACCACCAACCTAAGATTTAATACTCTATGAGTTTCCTTGACACCTAAACATTGTAGAGTCAAGTGGGTTGTCCTGTGAGATTAGTAAGCTGAAACATCATGAGTTGGCCTACTGGTAAATAGGGGAGCATGACTTTGATAAAGGACTAAGAGGTCATGTGTTCAATCGATGGTGGCCACATACCTAGGATTTAATATCCTACGAGTTTCCTTGACACAAATTTTTTTTTATATAAAATATTTCAAAATTTATTTTATGTAATGCTAATTATTATTTTTTTAACAAGGAATAAAATTCAATGAAATAATGAGAAGAGACTAATACTAAAAAAAATAGAACTTTAAAGGATAAAAGTGTTTTTTTATAATGATACTATAAACAAAATGTTTAAAAAGTTTGACATTGTGATTTAATTATTTATTAAAATTTCTGAGTAATTGTGTATAATACAAAAGTCATAAATTCACGGTTTATTGAATATTCTGTTTACAATTTCCAGCAATTATCCATAAAATGATTCAAGTAAGTATGTACATTCAACATTGTACAATTGGAGTCATTGTTTATCGTCCTTGTTTATGAATTCAAGATATTCGTTTGCATGACCTGTGTTCTAAATATTAATGGTATATTAAAGAAAATCTGTTCCTTCTTAATGTCCCAAGGTGACTGGAGATCCTGGTAAGCTGTTTGCTGTTGAAAGAAATTTCAGCAAGTTTGGAATTAGAGAACTTGCTAGAACTGGAAAGGTAGAAATAATACCTTTGTGCTAATTTTTTCCCTTTGACTTCAACAATTTGTGGGTTGGGGGTTTGCACTTGAGCTGCAACACTGGTTGACCCTTTTTGGTCTCTAACGAGCTACCATCCTTTACATATGTGTAACGACCCGATTGTCTAGGGCTACTATTAGGCTGTTACTACATGCATGCATACTTCAAATCAACTCGCTTTAACAAATTCAAACCAATTTCATACAAACAAATACTTTAGTGAAGAGGCTTGTTTCTTCCGTTTGTAATTTGAGCATTAGTGTCATTTCATTAATTCAATGAAAAGGCTTGTTTCCTTTTAAAAAAAAAAAAAAAAACTTTAGTGAAATCAAATATTCAACACCATGAAATCTTTGCTGGGTCCCCCTAGAAATAACAGTGAAAAACCACCCAGACTAAAGAAAACTTAAGAATAAAATGCTGAAAGTTCTAACATTGAAAGACGTGTAACAAAACATGAAAAAAAACTGGGCGGAAGCGACTGTCTGGTCCCATGGCACTATCATGGATTCTTTTTGTCATGTCAACATTTTAACAATTAGGACCCAATCTACAGCACCATTGACAATTTAAATATGTTTAAAAGCCTCAAGTTCTTACTAAAAGTTTCTGAAACTTACAAATCTGCTGGACAGCGATTCTTTACACCCCCAAACTTCGATCTAAAATCCTAAACATAATGGGTAAAAATAAATTGAAGCCGCATACCAAAGGGTCATCAAGATGCCTAAAAAATCCTTCCAAAAACACCATAGAACACCCAAATAAACACAAATCTTTTACCAATTAACCCTAACTGGCAGCGACGGCCTCTGGTGGCAGACGACAACAAGAACTACTTGCAGACGGTGGTAGATGTGTGGCTGGGCGTGGGTGAGTGGTTGGGCTTGAACGGCTGAGTGGCCGTGGGAATTGGCAGCGGCTGGTGTGAATGACTGAATGAATGTGTGAATCGGTGGCGGTTGGTAGTGCGTACTACTTGAAGAAGAAGAAGAACAACCCGGGGGGGGGGGGCTGCACGGGTAGGGAGAAGGAGATTTACCTTTTTTTAACCCTATATATATAACCCTTAGGTCAAAACCCTCATTGGATTTATTTAAATATATATATACATATTTCCTTTTCCTCCCTAAATTCACAATCTCACACAAACTCAAATTCAAATTCAAAATCTAAATTTTTTATCACAAATAACTTGAATTAATTTACTAACACATTAACTCGATTTTTAACTCCAAAAATCCAAAATATAATACCAAATAATTCAAGATAACTAAATTAAAATGACCCGAAATTCGGGATGTCAAATATGCATTAGTAAAGTCTAATAAAGTTAGCTCATTAGAGACAATGCAACACTGATGACCATTTTTCCAGTAGATTTTTAATGAGTTTCTTTCATGACCGAACCCACAAAATAAGAATGAACAAAGTACCATTATTTAGAATATTTCTATATCACACAAAATTTAAGTAAGAGATCATCCAATATATGGTAATGAATATATGTTACCACACATACCTATCTATACATATTGAAATATCTCAAATTGATTCTTATCAGAAAAAAAAAATCTCAAATAAAAATCCTATCTATGGTATGTTGATTATAGCTTAGATATCATTGCTTAAGTTTATCATGTACATATTTATTGACATATGAATATCATTGGCTAATTTTATCGTGTACGTATTATTTGGCATATGGATTATAAAATTTTCATGTTTAATGTACATATAATTTGTTTATCTGTGTATAGATAGCATTGAGAAGGGAGAAAATGGGGGAGACAGCTCCCTTTTGGAGGTTCTCAGCAGCCTCTTATCCTGATCTCGAAGAATCGAGGCCATTTGACCCCTTTGTAGGGGATGCAATTCAATCACTCAATGGCAACATCCCTACTTCAACCGTATGTACTTTTGTTCTTTTCCTTGAGAGCTTTGTTGAAACTTTTGCTTTTCAAGATTGCTGAAGCACAGAAGTAAGTATTTAATTGAAACCTGGGAATATTTAATGAAGTACTAGGGCTACAAAAATAATAATCAATGGGGAGATTAGAGATCCTCCGACAAAAAAATTAGCTCGTTCATGTTACGATTAGAAGTGAAAAAGAAAGTTCCATAAGCAAGATGTTTCAACTGCAATGAGAATTATTAAACTGCAATAATAACTCTGCTCTTTCTCATAAAGGAACAAAGTTTGTGCTTCACCTCAAATTGATTTGATTGCCTACTAGTTGGCCTATCGGGAAAGGGATGTGGCAGTTAACCTAGTGACTAGACTTTGCTGGCTTAGATTTCAAAAACAATTTGCAGATTTTATTAATTTATTTTTTATATGACATTTCTCTCTCTTTTTCCTCCTTCCTCTTTCTCCACCTCCAAACGTTGCTCGCTTCTGCACTACCTTCTCGTTCTTTGTTGTGCTGACTACCAACCATTTCTACCCTCCCTCTTTGTGTTGGCTTGTTAGAGGGATATTCGGTTAAAGATCGGGGAGTTCCTCCTCCATCCGCCTTTCAAAGAGAAAGGCCGTTTTCTTGAGCGAGTAGGGGTTTGCGCGTTATTGTGGGACCTTTGGGGGGAGAGAAGCAACAGTCTGTTTCGTGGTGTGGAGAGAGACCCTAGTGAGGTTTGTCTTTAGTGAGGTTTCGTGTTTCTCTTTGAGCTTCGGTTTCGAAGACTTTTTGTAATTATTCCCTAGGAAATATTTCTCTTAGTTGGAAACCTTTTCTCTAGGGCTTTTGTGGGCTTAGTTTTTTGTATGCCCTTGTATTCTTTCATTCTTTCTCAATGAAAGTTGTTTCATAAAAAAAAAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAAGGTATTGATGAAATATGATAGAGTGAGTAAATAGTATTTGGAATGCCAGAAATTATGGGTGGATTAAGCTTTGCAGACTTTTTGATGGAAAAACTAAGTTTGGTTTGAGAAAAACGAAAGAAAACCTGTATGACCACGTATCCCTCGACATTTTCTCTGGTCTCTCTTCTCCCTTAGACTTAGCCCACACCCTTCTATAAAGATGACACCTCTATTAAAGTTTTTGGCCATAGCTCCTCAATCCCATGATGACCTCCAAACCGTAAGAAAAGTGCAGTGTAGAAATTATTTATTTTTAAACCATCATGGTTTGGCCTAGTGGTAAAAAAGGAGACATAGTCTCAATAAATGACCAAGAGGTCATGGGTTCAATCCATGGTGGCCGCCTACCTAGGAATTAATATCCTAAGAGTTTCCTTGACACCTAAATGTTGTAGGGTCAAGCGGGTTGTCTCGTGAGATTATTGGCTATATGTACTTTTCCTCTCTCTAAAAATTTTCTTGCTCGAGTGCTAAGATGTGAGTTATAATGGAGAGTGGCAGTTTATAGGAGATTTTTTGTGGTAAGTGTAATAATGGGAGACAAGTATCCATTGAGGAACACAGAGGTTCGAAGATGGATAAGATCAAGTTGGATTTAGGGTGGTAGCTTGGGTTCGAGATTGTCTGGGTGTGGTGGTGTCCTTAGGAAAGCTAGAAGGTTTTTGGCATAGAAGACGACTTGAAAATGCGATTATCTTCTTCCAAATCCTCTCTAACTCTGGTGGGAGGTTTGCATCGATTTCTTTAGCTTTATTTCAGCCACAGTCTTCGTCAACCATCGCAACTTTTCTTTTTCGATCAGATTAAAGTGTTGGCCAGAGAAGTGAGAAGTTAAGTCAGAGTAGGTTGGCAAGCTCATTGTTGTTATCTGGCAAAGTCAGTCTATCCCTCTGTCTCTGTCTCATTTGCAGCATCAGATGGGGCAGATGAAGGATGGTCACAGGTTTGTTGCGAGGTTGAAGAAAGATGTTATGGGCTTGAAAGATCCGATCCAAGAAGTGATTATCGGGGCCAACCTTTATTCTAGGCCTTTTGAAGTGAACCCCTTTTATTTAACAAAGTCGAATTCTAATTCTCTTAAAAAGGGGAGTCTAGTGGTGGGCTGACCAACCTGTCGACTGGGCAAGGAACCGAGTAGTAAAGAACCAGAAATGGATGCTTCGAATATCCAGGGTATGGGTAAAGACGCTTCTAGAAAGGAAATGGGTTGGGAAAAGGAGATGAGCCTCGAACCTGAGGATCCAAATGGTAAGAGGAAGAAGAGTTTGGGTCTGATCCATCGGTTGTGAGCTATTTGGACGACGATTCTTTTATCTCTTCGGCTTTTGTCTGGAGAAAAGTCCTTCAAATGTGGGAGTTTTGTTTGTCTAGGAGAATGTTGACTCAAAACTTGCTGATCAGAGTGAAGAAAGGATTTATGTGCAGACAAAGATCGTGGAATAGAGTCGTCAACAACAAATTACATTGGTTGAAGATAAGGTTAGACCTACTCCAACTTCCTTTGAGGACGCTCAGATGGCTCATTAATCGGGGGTGCTTTCTCAGGCATTCTAGAGGGAAAACGTGGATGATTTAGGTGGTAAGATTAGTGTTTCTTCTCCTTCGTTGGCTCTTAGTCCTCCTTTGGCCGAGAGGGTGTTGGGTGTGGGGGGCTATCTCTCAAAGGCTCGTGGGGTGGGGTCCATTGCCATTGCCTATGGGTCTTTCGTCTGGGTTGGTGTTGGGGGGAGGGGATTCTGGTCAGTTTCTGTTGTCGAGTTCCTTCCCAAATTTTGGTGGTGCCTTACTATTATGCCAGTTTACTCTTTTGGGGAGGGGTGTTCTGATTTAGCTTCTTGGTCTAATGCTGTGGGTGTTAGGTTAAGGGGTGGAGGTGTGCTGCTGCCCTATGGGGTTTTGATGCGTGACCAATTCCCTTTCTCTAATCCTCTCTTGGTTCATTTCCTGATTTCCAATGGGGAGTCTTACGGGTTCAGGCAAGGGGGGTGGGGTGCGCTAGCAACTGTCGGAGTCCAAAGGGTGGAAAATGAAAAGGTCAAAAGGTGGTAA

mRNA sequence

ATGCTGCTATTTATTTTACCTTTAAACTCTTTAGATATTTCAATTTATCAGGTAGAAGATATCTCAAGAGAGCCCCAAGTAGAGCGTGAGCTGGTGCTTATGAAACTCAATGCAGATTCAAAAACTCGTGCTGAGGTGACGACTTGCATTATGTTTTTAATTGTGACTGGAGATCCTGGTAAGCTGTTTGCTGTTGAAAGAAATTTCAGCAAGTTTGGAATTAGAGAACTTGCTAGAACTGGAAAGATAGCATTGAGAAGGGAGAAAATGGGGGAGACAGCTCCCTTTTGGAGGTTCTCAGCAGCCTCTTATCCTGATCTCGAAGAATCGAGGCCATTTGACCCCTTTGTAGGGGATGCAATTCAATCACTCAATGGCAACATCCCTACTTCAACCCATCAGATGGGGCAGATGAAGGATGGTCACAGGTTTGTTGCGAGGTTGAAGAAAGATGTTATGGGCTTGAAAGATCCGATCCAAGAAGTGATTATCGGGGCCAACCTTTATTCTAGGCCTTTTGAAGAACCGAGTAGTAAAGAACCAGAAATGGATGCTTCGAATATCCAGGGTATGGGTAAAGACGCTTCTAGAAAGGAAATGGGTTGGGAAAAGGAGATGAGCCTCGAACCTGAGGATCCAAATGGTGGTAAGATTAGTGTTTCTTCTCCTTCGTTGGCTCTTAGTCCTCCTTTGGCCGAGAGGGTGTTGGGTGTGGGGGGCTATCTCTCAAAGGCTCGTGGGGTGGGGTCCATTGCCATTGCCTATGGGTCTTTCGTCTGGGTTGGTGTTGGGGGGAGGGGATTCTGGTCAGTTTCTGTTGTCGAGTTCCTTCCCAAATTTTGGTGGTGCCTTACTATTATGCCAGTTTACTCTTTTGGGGAGGGGTGTTCTGATTTAGCTTCTTGGTCTAATGCTGTGGGTGTTAGGTTAAGGGGTGGAGGTGTGCTGCTGCCCTATGGGGTTTTGATGCGTGACCAATTCCCTTTCTCTAATCCTCTCTTGGTTCATTTCCTGATTTCCAATGGGGAGTCTTACGGGTTCAGGCAAGGGGGGTGGGGTGCGCTAGCAACTGTCGGAGTCCAAAGGGTGGAAAATGAAAAGGTCAAAAGGTGGTAA

Coding sequence (CDS)

ATGCTGCTATTTATTTTACCTTTAAACTCTTTAGATATTTCAATTTATCAGGTAGAAGATATCTCAAGAGAGCCCCAAGTAGAGCGTGAGCTGGTGCTTATGAAACTCAATGCAGATTCAAAAACTCGTGCTGAGGTGACGACTTGCATTATGTTTTTAATTGTGACTGGAGATCCTGGTAAGCTGTTTGCTGTTGAAAGAAATTTCAGCAAGTTTGGAATTAGAGAACTTGCTAGAACTGGAAAGATAGCATTGAGAAGGGAGAAAATGGGGGAGACAGCTCCCTTTTGGAGGTTCTCAGCAGCCTCTTATCCTGATCTCGAAGAATCGAGGCCATTTGACCCCTTTGTAGGGGATGCAATTCAATCACTCAATGGCAACATCCCTACTTCAACCCATCAGATGGGGCAGATGAAGGATGGTCACAGGTTTGTTGCGAGGTTGAAGAAAGATGTTATGGGCTTGAAAGATCCGATCCAAGAAGTGATTATCGGGGCCAACCTTTATTCTAGGCCTTTTGAAGAACCGAGTAGTAAAGAACCAGAAATGGATGCTTCGAATATCCAGGGTATGGGTAAAGACGCTTCTAGAAAGGAAATGGGTTGGGAAAAGGAGATGAGCCTCGAACCTGAGGATCCAAATGGTGGTAAGATTAGTGTTTCTTCTCCTTCGTTGGCTCTTAGTCCTCCTTTGGCCGAGAGGGTGTTGGGTGTGGGGGGCTATCTCTCAAAGGCTCGTGGGGTGGGGTCCATTGCCATTGCCTATGGGTCTTTCGTCTGGGTTGGTGTTGGGGGGAGGGGATTCTGGTCAGTTTCTGTTGTCGAGTTCCTTCCCAAATTTTGGTGGTGCCTTACTATTATGCCAGTTTACTCTTTTGGGGAGGGGTGTTCTGATTTAGCTTCTTGGTCTAATGCTGTGGGTGTTAGGTTAAGGGGTGGAGGTGTGCTGCTGCCCTATGGGGTTTTGATGCGTGACCAATTCCCTTTCTCTAATCCTCTCTTGGTTCATTTCCTGATTTCCAATGGGGAGTCTTACGGGTTCAGGCAAGGGGGGTGGGGTGCGCTAGCAACTGTCGGAGTCCAAAGGGTGGAAAATGAAAAGGTCAAAAGGTGGTAA

Protein sequence

MLLFILPLNSLDISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCIMFLIVTGDPGKLFAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLEESRPFDPFVGDAIQSLNGNIPTSTHQMGQMKDGHRFVARLKKDVMGLKDPIQEVIIGANLYSRPFEEPSSKEPEMDASNIQGMGKDASRKEMGWEKEMSLEPEDPNGGKISVSSPSLALSPPLAERVLGVGGYLSKARGVGSIAIAYGSFVWVGVGGRGFWSVSVVEFLPKFWWCLTIMPVYSFGEGCSDLASWSNAVGVRLRGGGVLLPYGVLMRDQFPFSNPLLVHFLISNGESYGFRQGGWGALATVGVQRVENEKVKRW
Homology
[Close]
BLAST of Lsi06G006720 vs. Swiss-Prot
Match: ILVH_NICPL (Acetolactate synthase small subunit 1, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 6.6e-31
Identity = 69/110 (62.73%), Postives = 86/110 (78.18%), Query Frame = 1 

Query: 13  ISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCI--------------MFLIVTGD 72
           +++ +VED+S+EPQVEREL+L+K++AD K RAEV   +              + + VTGD
Sbjct: 88  VNVIKVEDLSKEPQVERELMLIKISADPKYRAEVMWLVDVFRAKIVDISDQSLTIEVTGD 147

Query: 73  PGKLFAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLE 109
           PGK+ AV+RN SKFGIRE+ARTGKIALRREKMGE+APFWRFSAASYPDLE
Sbjct: 148 PGKMVAVQRNLSKFGIREIARTGKIALRREKMGESAPFWRFSAASYPDLE 197

[Close]
BLAST of Lsi06G006720 vs. Swiss-Prot
Match: ILVH2_ARATH (Acetolactate synthase small subunit 2, chloroplastic OS=Arabidopsis thaliana GN=At2g31810 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.1e-29
Identity = 67/114 (58.77%), Postives = 83/114 (72.81%), Query Frame = 1 

Query: 13  ISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCI--------------MFLIVTGD 72
           +++ +VEDIS EPQVEREL+L+K+NA  ++RAE+   +              + + VTGD
Sbjct: 150 VNVLKVEDISSEPQVERELMLVKVNAHPESRAEIMWLVDTFRARVVDIAEHALTIEVTGD 209

Query: 73  PGKLFAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLEESRP 113
           PGK+ AVERN  KF IRE+ RTGKIALRREKMG TAPFWRFSAASYPDL+E  P
Sbjct: 210 PGKMIAVERNLKKFQIREIVRTGKIALRREKMGATAPFWRFSAASYPDLKEQAP 263

[Close]
BLAST of Lsi06G006720 vs. Swiss-Prot
Match: ILVH1_ARATH (Acetolactate synthase small subunit 1, chloroplastic OS=Arabidopsis thaliana GN=VAT1 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.4e-28
Identity = 69/134 (51.49%), Postives = 89/134 (66.42%), Query Frame = 1 

Query: 8   LNSLDISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCI--------------MFL 67
           LN L +++ +VED+S+EP VEREL+L+KLNAD  TR+E+   +              + +
Sbjct: 136 LNKL-VNVIKVEDLSKEPHVERELMLIKLNADPSTRSEIMWLVDIFRAKIVDTSEQSLTI 195

Query: 68  IVTGDPGKLFAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLEESRPF 127
            VTGDPGK+ A+  N  KFGI+E+ARTGKIALRREKMGETAPFWRFSAASYP L +    
Sbjct: 196 EVTGDPGKMVALTTNLEKFGIKEIARTGKIALRREKMGETAPFWRFSAASYPHLVKESSH 255

[Close]
BLAST of Lsi06G006720 vs. Swiss-Prot
Match: ILVH_PYRYE (Acetolactate synthase small subunit OS=Pyropia yezoensis GN=ilvH PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 9.9e-11
Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = 1 

Query: 13  ISIYQVEDISREPQVERELVLMKLNADSKTRAE--------------VTTCIMFLIVTGD 72
           ++I  V+D++  P VEREL+L+K+  +S+TR E              +   ++ + VTGD
Sbjct: 68  VNILNVQDVTNIPSVERELMLIKIQINSQTRTEALEIVRIFRAKIVDIAEDLLIIEVTGD 127

Query: 73  PGKLFAVERNFSKFGIRELARTGKIALRR 88
           PGK+ A+E+  +KFGI E+ARTGKI L R
Sbjct: 128 PGKIVAIEQLLTKFGIIEIARTGKILLVR 156

[Close]
BLAST of Lsi06G006720 vs. Swiss-Prot
Match: ILVH_CYACA (Acetolactate synthase small subunit OS=Cyanidium caldarium GN=ilvH PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.3e-10
Identity = 37/89 (41.57%), Postives = 58/89 (65.17%), Query Frame = 1 

Query: 13  ISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCI--------------MFLIVTGD 72
           ++I +V++I+  P VEREL+L+K+NA + +R E+ + +              + L +TGD
Sbjct: 68  VNILKVDNITEIPCVERELILVKINASTSSRPEILSILQVFRAKVVDLSENLLVLELTGD 127

Query: 73  PGKLFAVERNFSKFGIRELARTGKIALRR 88
           PGK+ A+++   KFGI E+ARTGKIAL R
Sbjct: 128 PGKVAAIQQLLQKFGIIEIARTGKIALTR 156

[Close]
BLAST of Lsi06G006720 vs. TrEMBL
Match: A0A0A0LXQ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652230 PE=4 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.5e-42
Identity = 97/136 (71.32%), Postives = 107/136 (78.68%), Query Frame = 1 

Query: 11  LDISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCI--------------MFLIVT 70
           ++ISI QVEDISR+PQVERELVLMKLNADS TRAE+   +              + + VT
Sbjct: 8   VNISINQVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVT 67

Query: 71  GDPGKLFAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLEESRPFDPF 130
           GDPGKL AVERNFSKFGIRELARTGKIALRREK GETAPFWRFSAASYPDLE+SRP + F
Sbjct: 68  GDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSAASYPDLEDSRPINSF 127

Query: 131 VGDAIQSLNGNIPTST 133
           V DAIQSL G + TST
Sbjct: 128 VEDAIQSLKGQVSTST 143

[Close]
BLAST of Lsi06G006720 vs. TrEMBL
Match: D7SYQ0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0220g00110 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.6e-34
Identity = 82/138 (59.42%), Postives = 101/138 (73.19%), Query Frame = 1 

Query: 8   LNSLDISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCI--------------MFL 67
           LN L +++ +V+D+SREPQVEREL+L+KLNAD   RAE+   +              + +
Sbjct: 133 LNKL-VNVLKVKDLSREPQVERELMLIKLNADPSKRAEIMWLVDIFRAKIVDISEHSLTI 192

Query: 68  IVTGDPGKLFAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLEESRPF 127
            VTGDPGK+ AV+RN SKFGI+ELARTGKIALRREKMGETAPFWRFSAASYPDLEE+ P 
Sbjct: 193 EVTGDPGKMVAVQRNLSKFGIKELARTGKIALRREKMGETAPFWRFSAASYPDLEETIPV 252

Query: 128 DPFVGDAIQSLNGNIPTS 132
           +  V +  + LNGN  TS
Sbjct: 253 NALVRNVKRPLNGNPSTS 269

[Close]
BLAST of Lsi06G006720 vs. TrEMBL
Match: A0A067GP63_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0114911mg PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 7.1e-32
Identity = 78/145 (53.79%), Postives = 98/145 (67.59%), Query Frame = 1 

Query: 8   LNSLDISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCI--------------MFL 67
           LN L +++ +VEDIS EP VEREL+L+KLN D+ T  E+   +              + +
Sbjct: 139 LNKL-VNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALTI 198

Query: 68  IVTGDPGKLFAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLEESRPF 127
            VTGDPGK+ AV+RN SKFGI+ELARTGKIALRREK+G+TAPFW FSAASYPDLEE +  
Sbjct: 199 EVTGDPGKMVAVQRNLSKFGIKELARTGKIALRREKLGDTAPFWNFSAASYPDLEEKKRT 258

Query: 128 DPFVGDAIQSLNGNIPTSTHQMGQM 139
             F+ +  QSLNGN    T   G +
Sbjct: 259 GIFIPETNQSLNGNANVDTSSRGDV 282

[Close]
BLAST of Lsi06G006720 vs. TrEMBL
Match: A0A067GBY6_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0114911mg PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 7.1e-32
Identity = 78/145 (53.79%), Postives = 98/145 (67.59%), Query Frame = 1 

Query: 8   LNSLDISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCI--------------MFL 67
           LN L +++ +VEDIS EP VEREL+L+KLN D+ T  E+   +              + +
Sbjct: 139 LNKL-VNVIKVEDISNEPHVERELMLIKLNGDTSTWPEIMWLVDIFRAKVVDISEHALTI 198

Query: 68  IVTGDPGKLFAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLEESRPF 127
            VTGDPGK+ AV+RN SKFGI+ELARTGKIALRREK+G+TAPFW FSAASYPDLEE +  
Sbjct: 199 EVTGDPGKMVAVQRNLSKFGIKELARTGKIALRREKLGDTAPFWNFSAASYPDLEEKKRT 258

Query: 128 DPFVGDAIQSLNGNIPTSTHQMGQM 139
             F+ +  QSLNGN    T   G +
Sbjct: 259 GIFIPETNQSLNGNANVDTSSRGDV 282

[Close]
BLAST of Lsi06G006720 vs. TrEMBL
Match: W9S3U2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_011796 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.6e-31
Identity = 80/139 (57.55%), Postives = 97/139 (69.78%), Query Frame = 1 

Query: 8   LNSLDISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCI--------------MFL 67
           LN L +++ +VEDISREPQVEREL+L+KLNAD  TRAE+   +              + +
Sbjct: 156 LNKL-VNVIKVEDISREPQVERELMLIKLNADPNTRAEIMWLVDIFRGRIVDISESTLTI 215

Query: 68  IVTGDPGKLFAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLEESRPF 127
            VTGDPGK+ AV RN  KFGI+E+ARTGKIALRREKMGETAPFWRFSA+SYPDLE S P 
Sbjct: 216 EVTGDPGKMVAVLRNLMKFGIKEIARTGKIALRREKMGETAPFWRFSASSYPDLERSVPV 275

Query: 128 DPFVGDAIQSLNGNIPTST 133
           D  V +   S N    +S+
Sbjct: 276 DGLVTNTNHSPNAASTSSS 293

[Close]
BLAST of Lsi06G006720 vs. TAIR10
Match: AT2G31810.1 (AT2G31810.1 ACT domain-containing small subunit of acetolactate synthase protein)

HSP 1 Score: 131.3 bits (329), Expect = 1.2e-30
Identity = 67/114 (58.77%), Postives = 83/114 (72.81%), Query Frame = 1 

Query: 13  ISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCI--------------MFLIVTGD 72
           +++ +VEDIS EPQVEREL+L+K+NA  ++RAE+   +              + + VTGD
Sbjct: 150 VNVLKVEDISSEPQVERELMLVKVNAHPESRAEIMWLVDTFRARVVDIAEHALTIEVTGD 209

Query: 73  PGKLFAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLEESRP 113
           PGK+ AVERN  KF IRE+ RTGKIALRREKMG TAPFWRFSAASYPDL+E  P
Sbjct: 210 PGKMIAVERNLKKFQIREIVRTGKIALRREKMGATAPFWRFSAASYPDLKEQAP 263

[Close]
BLAST of Lsi06G006720 vs. TAIR10
Match: AT5G16290.1 (AT5G16290.1 VALINE-TOLERANT 1)

HSP 1 Score: 128.6 bits (322), Expect = 7.8e-30
Identity = 69/134 (51.49%), Postives = 89/134 (66.42%), Query Frame = 1 

Query: 8   LNSLDISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCI--------------MFL 67
           LN L +++ +VED+S+EP VEREL+L+KLNAD  TR+E+   +              + +
Sbjct: 136 LNKL-VNVIKVEDLSKEPHVERELMLIKLNADPSTRSEIMWLVDIFRAKIVDTSEQSLTI 195

Query: 68  IVTGDPGKLFAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLEESRPF 127
            VTGDPGK+ A+  N  KFGI+E+ARTGKIALRREKMGETAPFWRFSAASYP L +    
Sbjct: 196 EVTGDPGKMVALTTNLEKFGIKEIARTGKIALRREKMGETAPFWRFSAASYPHLVKESSH 255

[Close]
BLAST of Lsi06G006720 vs. NCBI nr
Match: gi|659085884|ref|XP_008443657.1| (PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 8.0e-45
Identity = 104/160 (65.00%), Postives = 117/160 (73.12%), Query Frame = 1 

Query: 8   LNSLDISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCI--------------MFL 67
           LN L +++ +VEDISR+PQVERELVLMKLNADS TRAE+   +              + +
Sbjct: 138 LNKL-VNVIKVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTI 197

Query: 68  IVTGDPGKLFAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLEESRPF 127
            VTGDPGKL AVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLE+SRP 
Sbjct: 198 EVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLEDSRPV 257

Query: 128 DPFVGDAIQSLNGNIPTSTHQM-----------GQMKDGH 143
           D FVGDAIQS NG +PTST  +           GQ+ D H
Sbjct: 258 DSFVGDAIQSFNGKVPTSTGDVYPVEPYESFHSGQVLDAH 296

[Close]
BLAST of Lsi06G006720 vs. NCBI nr
Match: gi|700211544|gb|KGN66640.1| (hypothetical protein Csa_1G652230 [Cucumis sativus])

HSP 1 Score: 181.8 bits (460), Expect = 2.2e-42
Identity = 97/136 (71.32%), Postives = 107/136 (78.68%), Query Frame = 1 

Query: 11  LDISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCI--------------MFLIVT 70
           ++ISI QVEDISR+PQVERELVLMKLNADS TRAE+   +              + + VT
Sbjct: 8   VNISINQVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTIEVT 67

Query: 71  GDPGKLFAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLEESRPFDPF 130
           GDPGKL AVERNFSKFGIRELARTGKIALRREK GETAPFWRFSAASYPDLE+SRP + F
Sbjct: 68  GDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSAASYPDLEDSRPINSF 127

Query: 131 VGDAIQSLNGNIPTST 133
           V DAIQSL G + TST
Sbjct: 128 VEDAIQSLKGQVSTST 143

[Close]
BLAST of Lsi06G006720 vs. NCBI nr
Match: gi|449442655|ref|XP_004139096.1| (PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 178.7 bits (452), Expect = 1.9e-41
Identity = 96/139 (69.06%), Postives = 108/139 (77.70%), Query Frame = 1 

Query: 8   LNSLDISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCI--------------MFL 67
           LN L +++ +VEDISR+PQVERELVLMKLNADS TRAE+   +              + +
Sbjct: 138 LNKL-VNVIKVEDISRQPQVERELVLMKLNADSSTRAEIMWLVDIFRGKIVDISEHSVTI 197

Query: 68  IVTGDPGKLFAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLEESRPF 127
            VTGDPGKL AVERNFSKFGIRELARTGKIALRREK GETAPFWRFSAASYPDLE+SRP 
Sbjct: 198 EVTGDPGKLVAVERNFSKFGIRELARTGKIALRREKRGETAPFWRFSAASYPDLEDSRPI 257

Query: 128 DPFVGDAIQSLNGNIPTST 133
           + FV DAIQSL G + TST
Sbjct: 258 NSFVEDAIQSLKGQVSTST 275

[Close]
BLAST of Lsi06G006720 vs. NCBI nr
Match: gi|359495876|ref|XP_002266924.2| (PREDICTED: acetolactate synthase small subunit 2, chloroplastic [Vitis vinifera])

HSP 1 Score: 152.9 bits (385), Expect = 1.1e-33
Identity = 82/138 (59.42%), Postives = 101/138 (73.19%), Query Frame = 1 

Query: 8   LNSLDISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCI--------------MFL 67
           LN L +++ +V+D+SREPQVEREL+L+KLNAD   RAE+   +              + +
Sbjct: 133 LNKL-VNVLKVKDLSREPQVERELMLIKLNADPSKRAEIMWLVDIFRAKIVDISEHSLTI 192

Query: 68  IVTGDPGKLFAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLEESRPF 127
            VTGDPGK+ AV+RN SKFGI+ELARTGKIALRREKMGETAPFWRFSAASYPDLEE+ P 
Sbjct: 193 EVTGDPGKMVAVQRNLSKFGIKELARTGKIALRREKMGETAPFWRFSAASYPDLEETIPV 252

Query: 128 DPFVGDAIQSLNGNIPTS 132
           +  V +  + LNGN  TS
Sbjct: 253 NALVRNVKRPLNGNPSTS 269

[Close]
BLAST of Lsi06G006720 vs. NCBI nr
Match: gi|657960294|ref|XP_008371723.1| (PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like, partial [Malus domestica])

HSP 1 Score: 149.1 bits (375), Expect = 1.6e-32
Identity = 82/139 (58.99%), Postives = 100/139 (71.94%), Query Frame = 1 

Query: 8   LNSLDISIYQVEDISREPQVERELVLMKLNADSKTRAEVTTCI--------------MFL 67
           LN L +++ +VEDISREPQVEREL+L+KLNAD  TRAE+   +              + +
Sbjct: 129 LNKL-VNVIKVEDISREPQVERELMLIKLNADPSTRAEIMWLVDIFRAKIVDISEQSLTV 188

Query: 68  IVTGDPGKLFAVERNFSKFGIRELARTGKIALRREKMGETAPFWRFSAASYPDLEESRPF 127
            VTGDPGK+ AV+RN SKFGI+ELARTGKIALRREKMG TAPFWRFSAASYPDLE+S   
Sbjct: 189 EVTGDPGKVVAVQRNLSKFGIKELARTGKIALRREKMGATAPFWRFSAASYPDLEKSTSD 248

Query: 128 DPFVGDAIQSLNGNIPTST 133
           D     A  +LNG+  T++
Sbjct: 249 DDLAVKANGTLNGDAGTAS 266

The following BLAST results are available for this feature:
BLAST of Lsi06G006720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ILVH_NICPL6.6e-3162.73Acetolactate synthase small subunit 1, chloroplastic OS=Nicotiana plumbaginifoli... [more]
ILVH2_ARATH2.1e-2958.77Acetolactate synthase small subunit 2, chloroplastic OS=Arabidopsis thaliana GN=... [more]
ILVH1_ARATH1.4e-2851.49Acetolactate synthase small subunit 1, chloroplastic OS=Arabidopsis thaliana GN=... [more]
ILVH_PYRYE9.9e-1141.57Acetolactate synthase small subunit OS=Pyropia yezoensis GN=ilvH PE=3 SV=1[more]
ILVH_CYACA1.3e-1041.57Acetolactate synthase small subunit OS=Cyanidium caldarium GN=ilvH PE=3 SV=1[more]
BLAST of Lsi06G006720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXQ8_CUCSA1.5e-4271.32Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652230 PE=4 SV=1[more]
D7SYQ0_VITVI7.6e-3459.42Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0220g00110 PE=4 SV=... [more]
A0A067GP63_CITSI7.1e-3253.79Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g0114911mg PE=4 SV=1[more]
A0A067GBY6_CITSI7.1e-3253.79Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0114911mg PE=4 ... [more]
W9S3U2_9ROSA1.6e-3157.55Uncharacterized protein OS=Morus notabilis GN=L484_011796 PE=4 SV=1[more]
BLAST of Lsi06G006720 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G31810.11.2e-3058.77 ACT domain-containing small subunit of acetolactate synthase protein[more]
AT5G16290.17.8e-3051.49 VALINE-TOLERANT 1[more]
BLAST of Lsi06G006720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659085884|ref|XP_008443657.1|8.0e-4565.00PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis me... [more]
gi|700211544|gb|KGN66640.1|2.2e-4271.32hypothetical protein Csa_1G652230 [Cucumis sativus][more]
gi|449442655|ref|XP_004139096.1|1.9e-4169.06PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis sa... [more]
gi|359495876|ref|XP_002266924.2|1.1e-3359.42PREDICTED: acetolactate synthase small subunit 2, chloroplastic [Vitis vinifera][more]
gi|657960294|ref|XP_008371723.1|1.6e-3258.99PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like, partial [M... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019455Acetolactate_synth_ssu_C
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1901605 alpha-amino acid metabolic process
biological_process GO:0009081 branched-chain amino acid metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G006720.1Lsi06G006720.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019455Acetolactate synthase, small subunit, C-terminalPFAMPF10369ALS_ss_Ccoord: 50..87
score: 1.
NoneNo IPR availableGENE3DG3DSA:3.30.70.1150coord: 50..89
score: 8.
NoneNo IPR availablePANTHERPTHR30239ACETOLACTATE SYNTHASE III, REGULATORY SUBUNITcoord: 13..136
score: 1.2
NoneNo IPR availablePANTHERPTHR30239:SF6ACETOLACTATE SYNTHASE SMALL SUBUNIT 1, CHLOROPLASTICcoord: 13..136
score: 1.2
NoneNo IPR availableunknownSSF55021ACT-likecoord: 24..89
score: 3.97

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi06G006720ClCG03G010140Watermelon (Charleston Gray)lsiwcgB361
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi06G006720Cucumber (Gy14) v1cgylsiB573
Lsi06G006720Cucurbita maxima (Rimu)cmalsiB073
Lsi06G006720Cucurbita maxima (Rimu)cmalsiB128
Lsi06G006720Cucurbita moschata (Rifu)cmolsiB059
Lsi06G006720Cucurbita moschata (Rifu)cmolsiB118
Lsi06G006720Cucurbita pepo (Zucchini)cpelsiB017
Lsi06G006720Cucurbita pepo (Zucchini)cpelsiB299
Lsi06G006720Wild cucumber (PI 183967)cpilsiB059
Lsi06G006720Cucumber (Chinese Long) v2culsiB058
Lsi06G006720Melon (DHL92) v3.5.1lsimeB398
Lsi06G006720Watermelon (97103) v1lsiwmB391
Lsi06G006720Cucumber (Gy14) v2cgyblsiB055
Lsi06G006720Melon (DHL92) v3.6.1lsimedB420
Lsi06G006720Silver-seed gourdcarlsiB485
Lsi06G006720Silver-seed gourdcarlsiB886
Lsi06G006720Cucumber (Chinese Long) v3cuclsiB068
Lsi06G006720Watermelon (97103) v2lsiwmbB362
Lsi06G006720Wax gourdlsiwgoB511
Lsi06G006720Wax gourdlsiwgoB521