Lsi06G006110 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATGTCATTTTACATTCATATCTTTTTAATGAAAGTTTTTTTTTATTTTTTTATTTTTTTATTTTTTTTATTTTTATCTCTATATCTCTCTAACCAAACCATTATTTATTTCTCTTACAAATACAAAAAGGTTTAAAGTTTACAAAAATAGCTCGAAGTTCACCTCCTCACCACCCCTATTGGACAAGACGAAAGGCAAAAATCATGGATGATCAAGTGAATGAGCAGGTCCAGGCGGTACGTCAAGATGTAGAAGAGTTGAAGGAGCAATTAACGAAAGTCTTGGAATTGCTCACTGTCGGGAGAGGGAAAACTGTTGTCGGATCTTCGTCACAAGTAGAATTTGGTCTGAATCAGACCCTAGAAGAAATGCCTGCTTATCCCCCAGGGTTTACCCCTCAAATGATGCCAAGCCCGCACCTGGCGGGAGGGTCTTATCCTACATCATCTCCGACACAAGATTCTACTCAGGCTTTGCCACAGACAAACCGTGTGAACGATCCAGTATCCACCCCAGTTGTAGAGGGTGGTAGAAAGATTCCAGAAGAGCCTAGTAGCAAGAAAAGACTGGAATTTTTAGAAGAAAGGCTGCGAGCGATCGAAGGTGCAGATGTATATGGGGAGGTTGATGCTACACATTTATGCTTAATCTCAGATGTAGTGATCCCTCCAAAGTTCAAGACTCCTGACTTCGAAAAATATAATGGGACCACGTGCCCAAAAAGTCATCTAGTAATGTACTGTCGAAAGATGTCTGCATATGCTCACGATGATAATTTGTTGATCCACTGTTTCCAGGATAGTTTGGTCGGCCCAGCCTCTCGTTGGTACATGCATTTGGACGGCTCCCAAGTGCATAAATGGAAAGATCTTGCTGATTCGTTCTTAAGGCAGTACAAATATAACATTGATATGGCACCAGACCGGTTAGACCTCCAGCGAATGGAGAAGAAGAATGTCGAGACATTCAAGGAGTATGCCCAAAGATGGAGGGAAATGGCCGCGCAAGTGCAACCCCCTTTAACTGATAGAGAGTTAACGGCCATGTTCATAAATACACTTTGATCCTCATACTACGACAGAATGATTGGGAGCGCTTCAACCAATTTCTCAGACATTATAACGATCGGAGGAAGGATTGAGTTTGGAATAAAGAATGGAAGGATTACTGATGCTGCCTCTGAATCAAGAAAAATGATGACCCCGAAGAAAAAGGAAGGGGAAGTACATGAGTTAAGCTCAACTCAGCGAATGTCAGCACAGGTGTCTTCAACAACTGTGGGGCAAACAAATTACTCTCCCAATCATCAGAGCGGAGGACAAAATCAGTATGGTCAGTCAAATCAGAGATTTGCAAAGAATAATTGGAAATAAACCCGTTTTGATCCAATACCCATGTCGTACACTGAACTCTTGCCACAGCTGCTAAAGAATCACCAAGTCGCCATTGTCCCTCAAGATCCTATACAACCGCCGTATCCTAAATGGTACGACCCAAGTGCAAGGTGTGAATACCATGCTGGGGCAGTTGGACACTCCACTGAGAATTGTTATCCCTTAAAGGCCAAGGTGCAAAGCTTAGTTAAGGCTGGTTGGTTGAAGTTTAAAAAGACAGAAGAAGAACCAGATGTCAACCAAAACCCACTCCCAAATCATGAAAACCCTACTATAAATGCTGTTGAGACATCCTTGAAATGTTACAAGGATAATGTTCATGATTTAACCACACCAATGAAGACTCTTTTCCTAATTCTTCATGAAGCTGGATATATATTGCCAAGAGTCAGCAATGATGGTGAGAGTGGAATAGGGTGCGTTGGTCAAAAGGGATGCTTACTTCACCCTGAGTTAGATGGACATTCCATGGAAGATTGTGTTGAATTCAAGAAAGAAGTACAGAAATTGATGGATGCAAAAATTTTGATGGTAAGTCAGGTGAATATACAGGAATTCGAAGTTGATATGATTTCCGGTGCATCATCTTCAGAAGAAGCCACAAAAAAGGCGTCATCTATACGAGAGCCATTAATCGTCCATTATGAGCAAAAGCCGAGCATCACTCCCTGTATCCAGATGCCTAAGACAATGACTGTTGAAGTACCAGGTCCTTTTGCTTATAAGGATAGTCGAGCTGTACCATGGAGGTACGAGTGCCAATTCATTACAAATAGTGTCAATTCTGCAGCAACTGGAGGGATGACTCGTAGCGGGAGATGCTACACACCAGATAATCTGAAGAGTTGCTCTAAGGAGGACGAAGCTCGACAGCGTAAGGGCAAAGCTGTAGAGGTGACGATTGAGGATGATCTAAATGATTTGAGCAAAGCTTTTGCAGATAAAGCCACGCTAGTCGGAAAGAAGACAGGTCATGAACCCGTCTCTGAAGAAGAAACACGTGAGTTTCTGAAGTTGATCAAGCAAAGTGAGTACAAAGTAATAGAGCAGTTGCATCATACTCCGGCTCGTATATCGATTTTGTCATTATTCATGCACTCTGAACCACATCGCCAGGTTTTGCTGGATATCTTAAATCAAGCACACGTGGGTCATGACATTTCGATAAACGCACTCAGTGAAATTGTTGGGAATATAACTGCTACAAATTGTATCTCTTTTACTGATGAAGAGATCCCTCCGGAAGGTACTGGGCACACCAAGGCTTTGCACATATCGGTAAAATGTAAGGACCATCATGTGGCTAGGGTCCTTGTTGATAACAGATCATCCCTAAACATTATGTCAAGATCCACTTTGATGAAACTTCCTGTAGATCCCTCCTATTTGAAGCCGAGTACCATGGTAGTTAGGGCCTTTGACGGTGCTCGTAGAGAAGTGATTGGAGACATAGAGATCCCGTTAAAAATTGGGCCCACCACTTTCAACGTACCATTTCAGGTCATGGATGTCAACTCTTCTTATAGTTTTTTGCTCGGACGACCTTGGATCCACTCAGCAGGGGCAGTTCCCTCATCACTACATCAAAGGGTAAAGTTCAGCGTGGAAGGTGGGCAGGCCATTGTTTATGGAGAGGAAGACATGTTTGTCACAAAAACGTCGACACTTCCTTATGTTGAAGCAGCAGAAGAAGCTTTTGAGTGCTCTTACAGATCATTTGAAGTCGCTAATGCTACTATCGTTCCAACTGAGGGCTTAGATATTAGTTGTTATATGTCTCGAACATCTCTAATGGTGGCGAGAACGTTGATAAGGAGTGGTTATCAGATGCACGAAGGTTTAGGAAAGAGCAATCAAGGAAACCCAGAGGTGATTTCTTTTCCTAAGGCTAAAGAAAGGTTTGGATTGGGGTATAAGCCAACAACTTCTGAATGGAAGAGGGTTCGAGCAGAGAAGAAGGAAAAAAGAAGTGCACGTCTCGAAGGACGTGAAGTCGAACGAGGAAGAATGCATATACCGCACCTATCGGATACTTTCAAGCCAGGCGAATTACTTTTCAACAACAAGCAGTCGAGGGAATGCATCAAGGAATTCGAGGCCTCAGTAGCTGTTATCACTGAAAACACTCGTTCGTCTTGTCAATTGGTTCGTCTTTGTTTGCCGGAATTTGAGTTGAGCAATTGGGAGGTCAAGAAGATGTCAAGCGTCACTAAAGTATTGCCAAAGTAATGACGTTGTCATGCACCTTGTGGTTATGCCTAAGGCCACAGGGATTTCTTTGTAATAAGGGCACTTTTCAATGCTTTTGTTTTGCTTTCAATGTCTGATCGCAATATGTACTTTTTTTGGTTAAAGAAATGGAAAGTATGATCAAATTTCTTTTTATCCCAATCATTGTGTCTATTCCATTCTACTTCGAAGCATGTTATTATTTATCGTTTCTTTCCCCCCTCCTCTACCTCTTACCAATACAATTCAGGGTCGATAACAGGGACATTGGAGACAAAAACTACGTCGATGAAACTGTTGATTTCGAAGTTCCAATCTGTAGTCTCGAGCAAAGTGCCGAAGACGAATGCGATATATCACCTGAGTTACTAAGGATGATTGAACAAGAAGAAAAGAAGAATGTACCATTCCAAGAACCTTTGGAAGTTGTTAATCTGGGGACACCAGAAGAGGCGAGAGAA ATGTATGATAATGTTCATGATTTAACCACACCAATGAAGACTCTTTTCCTAATTCTTCATGAAGCTGGATATATATTGCCAAGAGTCAGCAATGATGGTGAGAGTGGAATAGGGTGCGTTGGTCAAAAGGGATGCTTACTTCACCCTGAGTTAGATGGACATTCCATGGAAGATTGTGTTGAATTCAAGAAAGAAGTACAGAAATTGATGGATGCAAAAATTTTGATGGTAAGTCAGGTGAATATACAGGAATTCGAAGTTGATATGATTTCCGGTGCATCATCTTCAGAAGAAGCCACAAAAAAGGCGTCATCTATACGAGAGCCATTAATCGTCCATTATGAGCAAAAGCCGAGCATCACTCCCTGTATCCAGATGCCTAAGACAATGACTGTTGAAGTACCAGGTCCTTTTGCTTATAAGGATAGTCGAGCTGTACCATGGAGGTACGAGTGCCAATTCATTACAAATAGTGTCAATTCTGCAGCAACTGGAGGGATGACTCGTAGCGGGAGATGCTACACACCAGATAATCTGAAGAGTTGCTCTAAGGAGGACGAAGCTCGACAGCGTAAGGGCAAAGCTGTAGAGGTGACGATTGAGGATGATCTAAATGATTTGAGCAAAGCTTTTGCAGATAAAGCCACGCTAGTCGGAAAGAAGACAGGTCATGAACCCGTCTCTGAAGAAGAAACACGTGAGTTTCTGAAGTTGATCAAGCAAAGTGAGTACAAAGTAATAGAGCAGTTGCATCATACTCCGGCTCGTATATCGATTTTGTCATTATTCATGCACTCTGAACCACATCGCCAGGTTTTGCTGGATATCTTAAATCAAGCACACGTGGGTCATGACATTTCGATAAACGCACTCAGTGAAATTGTTGGGAATATAACTGCTACAAATTGTATCTCTTTTACTGATGAAGAGATCCCTCCGGAAGGTACTGGGCACACCAAGGCTTTGCACATATCGGTAAAATGTAAGGACCATCATGTGGCTAGGGTCCTTGTTGATAACAGATCATCCCTAAACATTATGTCAAGATCCACTTTGATGAAACTTCCTGTAGATCCCTCCTATTTGAAGCCGAGTACCATGGTAGTTAGGGCCTTTGACGGTGCTCGTAGAGAAGTGATTGGAGACATAGAGATCCCGTTAAAAATTGGGCCCACCACTTTCAACGTACCATTTCAGGTCATGGATGTCAACTCTTCTTATAGTTTTTTGCTCGGACGACCTTGGATCCACTCAGCAGGGGCAGTTCCCTCATCACTACATCAAAGGGTAAAGTTCAGCGTGGAAGGTGGGCAGGCCATTGTTTATGGAGAGGAAGACATGTTTGTCACAAAAACGTCGACACTTCCTTATGTTGAAGCAGCAGAAGAAGCTTTTGAGTGCTCTTACAGATCATTTGAAGTCGCTAATGCTACTATCGTTCCAACTGAGGGCTTAGATATTAGTTGTTATATGTCTCGAACATCTCTAATGGTGGCGAGAACGTTGATAAGGAGTGGTTATCAGATGCACGAAGGTTTAGGAAAGAGCAATCAAGGAAACCCAGAGGTGATTTCTTTTCCTAAGGCTAAAGAAAGGTTTGGATTGGGGTATAAGCCAACAACTTCTGAATGGAAGAGGGTTCGAGCAGAGAAGAAGGAAAAAAGAAGTGCACGTCTCGAAGGACCATGTTATTATTTATCGTTTCTTTCCCCCCTCCTCTACCTCTTACCAATACAATTCAGGGTCGATAACAGGGACATTGGAGACAAAAACTACGTCGATGAAACTGTTGATTTCGAAGTTCCAATCTGTAGTCTCGAGCAAAGTGCCGAAGACGAATGCGATATATCACCTGAGTTACTAAGGATGATTGAACAAGAAGAAAAGAAGAATGTACCATTCCAAGAACCTTTGGAAGTTGTTAATCTGGGGACACCAGAAGAGGCGAGAGAA ATGTATGATAATGTTCATGATTTAACCACACCAATGAAGACTCTTTTCCTAATTCTTCATGAAGCTGGATATATATTGCCAAGAGTCAGCAATGATGGTGAGAGTGGAATAGGGTGCGTTGGTCAAAAGGGATGCTTACTTCACCCTGAGTTAGATGGACATTCCATGGAAGATTGTGTTGAATTCAAGAAAGAAGTACAGAAATTGATGGATGCAAAAATTTTGATGGTAAGTCAGGTGAATATACAGGAATTCGAAGTTGATATGATTTCCGGTGCATCATCTTCAGAAGAAGCCACAAAAAAGGCGTCATCTATACGAGAGCCATTAATCGTCCATTATGAGCAAAAGCCGAGCATCACTCCCTGTATCCAGATGCCTAAGACAATGACTGTTGAAGTACCAGGTCCTTTTGCTTATAAGGATAGTCGAGCTGTACCATGGAGGTACGAGTGCCAATTCATTACAAATAGTGTCAATTCTGCAGCAACTGGAGGGATGACTCGTAGCGGGAGATGCTACACACCAGATAATCTGAAGAGTTGCTCTAAGGAGGACGAAGCTCGACAGCGTAAGGGCAAAGCTGTAGAGGTGACGATTGAGGATGATCTAAATGATTTGAGCAAAGCTTTTGCAGATAAAGCCACGCTAGTCGGAAAGAAGACAGGTCATGAACCCGTCTCTGAAGAAGAAACACGTGAGTTTCTGAAGTTGATCAAGCAAAGTGAGTACAAAGTAATAGAGCAGTTGCATCATACTCCGGCTCGTATATCGATTTTGTCATTATTCATGCACTCTGAACCACATCGCCAGGTTTTGCTGGATATCTTAAATCAAGCACACGTGGGTCATGACATTTCGATAAACGCACTCAGTGAAATTGTTGGGAATATAACTGCTACAAATTGTATCTCTTTTACTGATGAAGAGATCCCTCCGGAAGGTACTGGGCACACCAAGGCTTTGCACATATCGGTAAAATGTAAGGACCATCATGTGGCTAGGGTCCTTGTTGATAACAGATCATCCCTAAACATTATGTCAAGATCCACTTTGATGAAACTTCCTGTAGATCCCTCCTATTTGAAGCCGAGTACCATGGTAGTTAGGGCCTTTGACGGTGCTCGTAGAGAAGTGATTGGAGACATAGAGATCCCGTTAAAAATTGGGCCCACCACTTTCAACGTACCATTTCAGGTCATGGATGTCAACTCTTCTTATAGTTTTTTGCTCGGACGACCTTGGATCCACTCAGCAGGGGCAGTTCCCTCATCACTACATCAAAGGGTAAAGTTCAGCGTGGAAGGTGGGCAGGCCATTGTTTATGGAGAGGAAGACATGTTTGTCACAAAAACGTCGACACTTCCTTATGTTGAAGCAGCAGAAGAAGCTTTTGAGTGCTCTTACAGATCATTTGAAGTCGCTAATGCTACTATCGTTCCAACTGAGGGCTTAGATATTAGTTGTTATATGTCTCGAACATCTCTAATGGTGGCGAGAACGTTGATAAGGAGTGGTTATCAGATGCACGAAGGTTTAGGAAAGAGCAATCAAGGAAACCCAGAGGTGATTTCTTTTCCTAAGGCTAAAGAAAGGTTTGGATTGGGGTATAAGCCAACAACTTCTGAATGGAAGAGGGTTCGAGCAGAGAAGAAGGAAAAAAGAAGTGCACGTCTCGAAGGACCATGTTATTATTTATCGTTTCTTTCCCCCCTCCTCTACCTCTTACCAATACAATTCAGGGTCGATAACAGGGACATTGGAGACAAAAACTACGTCGATGAAACTGTTGATTTCGAAGTTCCAATCTGTAGTCTCGAGCAAAGTGCCGAAGACGAATGCGATATATCACCTGAGTTACTAAGGATGATTGAACAAGAAGAAAAGAAGAATGTACCATTCCAAGAACCTTTGGAAGTTGTTAATCTGGGGACACCAGAAGAGGCGAGAGAA MYDNVHDLTTPMKTLFLILHEAGYILPRVSNDGESGIGCVGQKGCLLHPELDGHSMEDCVEFKKEVQKLMDAKILMVSQVNIQEFEVDMISGASSSEEATKKASSIREPLIVHYEQKPSITPCIQMPKTMTVEVPGPFAYKDSRAVPWRYECQFITNSVNSAATGGMTRSGRCYTPDNLKSCSKEDEARQRKGKAVEVTIEDDLNDLSKAFADKATLVGKKTGHEPVSEEETREFLKLIKQSEYKVIEQLHHTPARISILSLFMHSEPHRQVLLDILNQAHVGHDISINALSEIVGNITATNCISFTDEEIPPEGTGHTKALHISVKCKDHHVARVLVDNRSSLNIMSRSTLMKLPVDPSYLKPSTMVVRAFDGARREVIGDIEIPLKIGPTTFNVPFQVMDVNSSYSFLLGRPWIHSAGAVPSSLHQRVKFSVEGGQAIVYGEEDMFVTKTSTLPYVEAAEEAFECSYRSFEVANATIVPTEGLDISCYMSRTSLMVARTLIRSGYQMHEGLGKSNQGNPEVISFPKAKERFGLGYKPTTSEWKRVRAEKKEKRSARLEGPCYYLSFLSPLLYLLPIQFRVDNRDIGDKNYVDETVDFEVPICSLEQSAEDECDISPELLRMIEQEEKKNVPFQEPLEVVNLGTPEEARE
BLAST of Lsi06G006110 vs. TrEMBL
Match: A0A061EXR3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1) HSP 1 Score: 447.6 bits (1150), Expect = 2.6e-122 Identity = 257/569 (45.17%), Postives = 344/569 (60.46%), Query Frame = 1
BLAST of Lsi06G006110 vs. TrEMBL
Match: A0A061E6J4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_010507 PE=4 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 2.9e-121 Identity = 259/577 (44.89%), Postives = 350/577 (60.66%), Query Frame = 1
BLAST of Lsi06G006110 vs. TrEMBL
Match: A0A061ESA1_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_022266 PE=4 SV=1) HSP 1 Score: 441.4 bits (1134), Expect = 1.9e-120 Identity = 251/530 (47.36%), Postives = 332/530 (62.64%), Query Frame = 1
BLAST of Lsi06G006110 vs. TrEMBL
Match: A0A061E378_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_008095 PE=4 SV=1) HSP 1 Score: 438.0 bits (1125), Expect = 2.1e-119 Identity = 260/575 (45.22%), Postives = 343/575 (59.65%), Query Frame = 1
BLAST of Lsi06G006110 vs. TrEMBL
Match: A0A151R2D5_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_042162 PE=4 SV=1) HSP 1 Score: 427.6 bits (1098), Expect = 2.8e-116 Identity = 230/449 (51.22%), Postives = 309/449 (68.82%), Query Frame = 1
BLAST of Lsi06G006110 vs. NCBI nr
Match: gi|659094545|ref|XP_008448120.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103490408 [Cucumis melo]) HSP 1 Score: 583.9 bits (1504), Expect = 3.4e-163 Identity = 289/353 (81.87%), Postives = 319/353 (90.37%), Query Frame = 1
BLAST of Lsi06G006110 vs. NCBI nr
Match: gi|659122237|ref|XP_008461036.1| (PREDICTED: uncharacterized protein LOC103499741 [Cucumis melo]) HSP 1 Score: 575.5 bits (1482), Expect = 1.2e-160 Identity = 292/434 (67.28%), Postives = 345/434 (79.49%), Query Frame = 1
BLAST of Lsi06G006110 vs. NCBI nr
Match: gi|828327848|ref|XP_012573958.1| (PREDICTED: uncharacterized protein LOC101510858 [Cicer arietinum]) HSP 1 Score: 455.3 bits (1170), Expect = 1.8e-124 Identity = 260/637 (40.82%), Postives = 388/637 (60.91%), Query Frame = 1
BLAST of Lsi06G006110 vs. NCBI nr
Match: gi|590636870|ref|XP_007028966.1| (Uncharacterized protein TCM_024883 [Theobroma cacao]) HSP 1 Score: 447.6 bits (1150), Expect = 3.8e-122 Identity = 257/569 (45.17%), Postives = 344/569 (60.46%), Query Frame = 1
BLAST of Lsi06G006110 vs. NCBI nr
Match: gi|590695072|ref|XP_007044788.1| (Uncharacterized protein TCM_010507 [Theobroma cacao]) HSP 1 Score: 444.1 bits (1141), Expect = 4.1e-121 Identity = 259/577 (44.89%), Postives = 350/577 (60.66%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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