Lsi06G005950 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G005950
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Descriptionralf-like 9
Locationchr06 : 8154598 .. 8163741 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCGTATGAGTGTTACTTGCCCCTTGTGTCGGAATTCCCCTGCTCTAACTCTTATTGCTAATCCTTTCTCTAAGATTGTGCCTCTGGCTCCCAATCCCAGGTGATCTTCTTCTTCCTCTTCACAAAATTTTTAGGGTTAGAGTTTATGATTTTTCTCTTTGAATTGGTGCATGTGTTTACTTTTGACCATTGATTTATGATAGATATGGGAACCTCCTGGATTATCTCTAGTGTTTAGTCATTATGTAAAGTTGGAAAAGTTTCTAATAAAGATCGACTCAAACATTTAATTTTGTGTCTGATAAATTAATAACATCGGTTCTTTAATACTTACCTTACATAAAAAGATATAACTGGAGAGCATGTACTTGAATTTTGATTATGATCTTTCTTTACTGATATACCAAGTGAGGTTTATCGGATCTTGGATGTAGTTTAGGCAGACTAGAGAAGTGGTAGGAGGTAAAACTTTCGTCACTTTTGACTTTGATATTGAAGAATGTATTTTATTTCGTTTCATTCATTGCTTTGTTTTTTTGCAAGTTGTGGAGCTACAAAAGCTAATTCTAGCTCATAATAATATTCAATTGTTGAATGAAGAATTGGAGAATTTGTCTTCTCTTGTTGTATATAAAATGTTAGTGACAACAAACTTTCTAAATTACCAGCTGCAATTAGAGAGTGAATTCTGATTTAGTGTTTTCCTTTCTCGTTTCTTAGACAAAATTTTAATATGGTTATATTTTGGTAATGGTTATGTTGTTATTAATGCACTTCTGCAGGGCTTCGATGTTTCCTTCGATTCATTAATGAGAATACTTGAGGAAATTGGATCCACCACTTCACTTGTCAAGTATTCATTTTCCCTTCTACATCTCCCCTGTTGATTAGAATTTATGAAAAGACAATCTAGTAGAATATTTTCTGAAATGGGAGATTGTTGATGAATTCATTTGCTTTAAGTTTGTACTTTTTTTTATTTTATTTTATGAGCATCTAGGGGAATGGTATTACAAGGACATAAGGAGCTGAACTAATTGAAGTCTGCTAAAAACTCAGTTCTTCTTTATTTGAAGTAATTATCAGCTTTGCAACTTTTTTGCAGACTTGTACATACATTATTAATTTTCCTTCCTTCACATAAGTTTTTTCTTTTCTTGACAACAGAAAAAATATGTGATATTTACTATTCCTCCAATTGTTCACTTCTAAATGTAGTTCCTACATGTAAAGAAATCCTTTTTTAGTTTTATAAATCCATCTTCATCTATTGATTTTTTTTTTTTAATATTAATTGACCTAAGGAACTATTAGGTGGACTTGGAAGGTGTTTAGATATGTTGGATCTTAAGGTAATTGTTTCTTACTGTGATCTATGCTCAGTTCCACAACCCAAAATGGTATGCTTCTTGGCCACTTTACCTTGGCCAACCTTGTGGGGTCCTTTCCATTTCTTAGTATAGTAACTCTCTTGAACTTGCAAATTGTAATACCTCCTCACAAGTATAATGAGATTATAAGACCTGTTTTCTTTTGCCATCTCTTGTTAAGTTTATTCTTGCTCATATCTTAGACGATAAATGTTGATTAAGTTTATCCTTGCTCATATCCTAGATGATAAATGTTGATTGTACTCTCTCTTAAGCTAAATTTGCCTTTATTTGATACGAAAGTTACACGGTTGATTGAGTCGGTTGAATTTGATACATTTGATGGTTAAACCAAAACCTACAAGTTATTGGTTTTTAAAAATATTAGGGCGAGGGTTGAGATATACCCACTAATAATTAATGGTAAAAGGACTCTTATTTATTTGCTTTTAGCATAATGTATCTAGCAAGATTTCTTAGTGTACCCTTCCTCAGGCATCAAACAGTATAAACTATTTGTAAATAGTTTATCTATATTTGTAAATAGTTTGAATCATTTTGCTATATTCGAAAATAGCCTTAAAAAGTATACTATGACTAAATTTTTGTTTTCTTATTGTTATTTTTGTAATATTTGTAAGGCCAACTTTGCATCATACATTGAAACACAAAATTAATAAAATTATACTTAGATTTTTATATGGTAAATTAGGTGTTCTCTTTATTTTCTTTTGTGGATTGACTTTCTAATTATGATATAATTTTGGAGACATTTGAATTCTGTTCGTCAATCCTCCTCTCTTCGATTGGAGCTTATTATAATTTCGTGTTATTGGTCTCTTTTTCTATTTTGTTCCTCTAATATTTTTATTTGGTATATAATGGCGTGCAAGTATATAAGAGAAAACAGTTAATGTATTTTAAATTGTTGTGTCGTGCAGAGTTGGTGCAGTAGGTCCAAATATTTCAGTTTTGGTGAAGCACTTGGGATTTTCTAAGTTTAAGACTTCCAATTTGTAAGATAATTTAGTTGCTAACACTAGTACTAAATTGGGCTTTAATGTCGGTTTAAAACTGACATTATATAGGTACAATGTCGGTTGTCAACCGACATCGAAAATCATAAAGCAGAATTGTTCTCGTTGCAGAAGAATCAGACATGGTCATTGGTTCCAAAGCCTCCTAATCAGAAACTCATTCAGTCAAAGTGGATTTATAAAATCAAACCAGGTACATGAGGTGACAGTAAGCCTAGGTATAAGGTTAGGCTGGTGGACAAGGACTACACTTAGAAGGAGGGAGTTGACTTTCATGAGATTTTCTCTCCAATGGTGAGACATTCGTCCATTAGATTGTTTTTATCTATTGTTGTTCACTTTGATAAGTTTCTTGAATTGATGGACGTCACCACAACATTCCTTCATGGAGAATTGGAGATGGCTTAACTTAAGCGCTATGAGGTGAAGGAAAAGGAAGACATGGTTTGTCGTCTTCATAAGTCCATCTATGGACTGAAGCAATCGCCGAGACAGTGGTATATTAGGTTTGATACCTTTATCTTAAAACAGGGGTTTCACAGGAGCTCATATGATGCATGTGTTTACTAAAAACTATCTGAAAAGGGTACATATATTTATCTACTGTTATATATAGATGATATGATATTGGTGTCTAAGGATAATGCTGAAATCTATGAACTCAAGAGACAATTGAGTAGTGAGTTTGAGATGAAAGATCTAGAAGAGTTGAAAAAGATCTTAGGCATGAATGTTAAAATAGATAGGGAGAAAGATTTGTTAACCATTTTGTAGGAGAGTTATGTGCATAAACTGCTTGAGAAGTATAATATCTCTGGTTGTAAGGCAGTTTCGACACCCTTAACATCTCACTTTAGATTTTCTTCGTCTCAGTGTCGTATTACTAAACAAGAAAGGTTAGAGATGTCTAATATTCCCTATTGTAATGTTGTTGGAAGCATTATGTATCTGATGATTTGTACTAGGCCTGACTTGGGTTATGCTATGAGTATGATAAGTAAGTTTATGTCAAATCTTGGGAAGGATCATTGGAACGCAGTTAAATGAGTGCTTTGATATTTGAAAGGCAGTGTTAGTGTATCATTATGTTTTAGTAGAGATTGTGATAAATCAGTACTATTGGAAGGCTTCACAGATGCAAATTATGCTGCAAACCTTGACAAAAGAAGGTTTTTATCTGGTCACATTTTTCATTTGTATGGTAATGTGGTCAGTTGGAAAGTTGCTCTATAGCTAATTGCTACTTTGTCTACTACTAAGTTAGAGTATACTTCAGTTGGTGAAGTAGTGTTATTGAAGAGAATAGTTGGTGAGTTGTTGTCGCAGGAGTTCTTTCCTATCATCCGTTGTGGTAGTCAGAGTGCTATCCATCTTGCGAAGAATCCATCTCATTGTGAACGGTCAAAGCATATCGATTTTAAATTTCATTTTATCAGAGAGGTTGTTGCTCAAAAAGATACTGAATTAGTCAAAGTTCATACAGTTGAGAATTTGTCAGATATGTTAACTAAGGTTCTTCCAGCTCATAAGTTTAAATACATGTTCAATGAGCTGAATATTAAATCTAGATGATAGGGTGATTGATTGGAGATTCAGTTTGGTGCCTTAAAAATTTTTGTTATGAGGGAGATTTGTTGAAAATAACAAGTTATTTAAGTGGACTTCTCATTAAAGGCATTTAAGTAAATAAGGCCAGTGATATTTATGTAAATTGTGCATGATGCCAATTTTGTGAATAAGTTGATCTTCATCAACTTAGGGTCTCCATCGTGATTCAATTTAAGGAGAAGAAAAGAGGGCAGTTGAAATATAGAAAACACACACTTTTGGAGAGAGAGAAAACTCAACAGAGAGAGAGAAGAAGCCGTAAGTATGGGGTTTTTCGATCAGCCGAGCTTGTCGTCCTTGCTTGTTGGACGACAGGAGCGCAACAACGTGGGTTCTTCGGTTACATCACGAGTGTTCTCGTTCTGCAGAGACGTTGTTTGATGCGTGGGTCTTCGATTTGGAGAGTTTCGTTTGGCGTGTGGGTCTCGATTTCAAGGGCTGGTTTCAGACGTTCTTGGCCTCGATTTTATAGGCTATTTTCTGTGCGTGGGTCTCTCGGTACAGTGGGTGCTTGGCCGGCACTAAAGTTGGGTCCGACAAGCAATTGCTCAAGCGATTGGTCTTGGTTAAGAGGCAAAATAATCGTGGTTTTATTCTTCTTGAATGGATAAATTGCATATTGTTGATTCTTTCTAATTTCTGTAATTGTGATTTCTCTTAATAAAATCATTCCAAGATGGTTATCAAAGTGGATGTAGACCAAATTGGTCAAACCACTATATATCGTTTTTTTTATCGCCTGCAATTTATTTTGCTGGCTATTGCTTCTATTTGGGTGTATTATGAAATCTGTTTATATTTTACAAAGAGATTTAATTGCAATTGATTTTGTCAAATTGTTTGTTGTACAATCATAGAATTTTTTTCTTCCAAACTCTTAAAGTGATTTTTATCTATTTAAAACTCTTAAAAGGGGTTTTCATCTTTCTTGAGTAAAATAGTTGGTTTTTCTTAGCCAAATTTCAAATTCCAAAAACTATTTTTTTTAGTTTTTAAAACTTGGCTTGATTTTTGAAAATATTGACAGAAAGTAGATAATAAAGCCCTTCTCCACTTCTCTTAAACAAGAATCAGAGAAATAATACAACTTATGTCAATGTCACAACATGAAACACCTTTTACAATATCTTATAACATAGTCTAGATGACTACTTACTACAAGCTTTGATCACTGGAATAACAAAGTGGCTACAAATGCATGAAGATTATGAACAACCACATGAAAAAACAATTTACTCCCCAAACTATATTGCCACAAAAAAACAACCAATAATTTCATAAGTCTCCCCCTCTAGCTGCCAGCAAGAAACTGTCGAGAAGTAGAGAACAATCACAAATAATAAGCCAAATCAACATCCCCAGCCTTAGCCCCAGAGCTAGATAAACCATCAACCCAAGGAATGGACGACCTTAGCATCTGAAAGAGAGCATCCACCTCCTCCTTGTGCTTAACCACATTCCAAATAAAAGCAGAAAATGCATTTGACTCGGATGCAAGGACACACATAATTCGATTCCATAGCTGAGGTGGAATGAGAAGACCTGTATCCCCAACTGAAATATCAAGGACGAGAATCTTCAGCACTAGGTGGTGGAATGTCAATGTCGGGAACATGACAAGCTTGTAACAGTATATAAATATAAGTAATTGGAAGGAAGGTGGACCAAGAGTGTCAACATGAGACAAGATATTTAGGTTTTGAGAAAACAGGATACTACAGATCAATCATGGAAAACAAATAGGAAGTTTAACAACATATGAATCAACATGGCGAAGAATCACTAGTATAAAACTGGTCTATAATGTCAGTCGAAAACAGACATTATAAGGGTACGATGGTTGTCAGGCGACTAACTTTGAGGAAGATGCTATTAAAGGTGTTCAATGTCGGTCACTGTTGCATTCATAAAGTGCAACGCATAGACCATGTATACATGCGTACGTCGTCACAAACTGACTGATGTTATGAATTACCATGCGATGAACACAAGCTTTATCTGATTTGAGTCCAAATATAAACTTAAATGAGTAACCTGGTGAGTCCAGGGTCGAACTCAGGGACTTTTGTGCTTTTGTATTTTTAACCATGCGATGAATGCTTTATACATAGGGGGGAAAGAAATATGTTACTAACCTACAATATTAATTACAATACGAGAGAGCTAGGCGACGAGCAAAGGGATTTGTGATGTTTGTCAATGGAGTATTTCTCTACGCAAGTAGCATGCGATGGCATTTGTAAATTAATCTTAAGAACAGACAGGAATCTCTACAGCATGCGTCTATGCTTTCTTAGCGGTGTCGATTATATACGTTCGGTAGCAACCTCTCAGTTCATAATCTACACTTTCCTTATCTCTAAGGTACATGCGATAATCGACTGATGAATTGGCTCACCTTATTTCTAAGATGCTAATTCTCACTACTTAGTGCTTTTTACACTTTCTATACCCTCTCAGGCAAGAACTCCAGCTTTAAACGTGTCTCTCAATGGCTTAAAGCAAGGATTACTGATGCATTAACTAGTAAAACCAGTAAACATGCATAGATTCACACTTAGATTAGATCTTCCAGCACATCAAAAGAATAAGATGCAAACAAGCAGGTAGATGGATGAAACATTTGGACTTATATTAATATTTGAATCAGAAATCTCTCAAAATCAATTCAGAATAAAAATATAAGTGAGAGAAAGAACTAGGATAAAGATGTCGGGCTGTTGAGTCAATCTCTTGATCTCGCTGGCTTAGGATTGGCTGCTTGATGATAATACTTCAAGGTTGAAGATGATTCAAGCTTTTTCAAGAAGAATTCGGAAATTTGTCTTCGAAATTCTGCAGAGAAAAGCTTGAGGTTTGATGGCGATTCTCGTCTCTCTCTCGGGGAAGCTGATCTTTCAAGTCAACTAACCCCTTCTTCAGTTTTTAAGCTGACTATTTATAGGCGTCATTGCAGCTTCTCTCCAATGATTTTCTGACGCATGCATTAAATTCCATGCCCTGCTGCGCCGCTTGCTTTGTTGCAAATACATTGGCTATGCCATGAATCTGTCTCATCAGCTACCAACTAGTTCTGTGGATTTGACAATCGCCGCCTGAGCATGTCAGACCTTTATAGTTCATCGCATGGTTCATGTTGGTCGCCTCTTCTATGGTTATGTGATCATGGATGCAGCAGTGCTTTCAGCTTTTATACTTTATCTTTGAATTCCTGCGATGAAATCAAGAATTTTTCATAATTTCCCTTCTTATGGCATATGTAAATATCTGATTGCAAAGCATACTTATTAGCTACGATTTATACCATATTTCACTTATTTCCTTGCGAATTCCTCTAATTATTTTAAAGAATCGAATAAGATAACTTGTATTTCTACAAGTTATCAGTCACCATTAATGTTGATTTATTAAATTAGTTAGCCCATCATTAAATATTAGTTTTATGACAGACAATGACCGTCATCATTGCTTTATTAAAAATGTAAAAAATAAATAAATTATAGGTAGCGCACATGGCTGACTAACAATATTTCTATGCAAATAATAAAAGTAATTTATATTTGTATACACAACAATGTAGCTTTCAAGAAACACCATAATTAATTAATTCACTCAAACAAAAGTAATATGACTATTCGTCTCTCCCAAACTACATTCAACTTACAAAGATAGACAAAGTTGTTAACTATAATAAATACAAAACTATATATACATGTTGACCCCCAATAATTTATCTTTATGAGCGTTAAATACTTGGTGAAGTTCCATCGTCAGTTTCACCATACTTGCTTTTTTCTTACGAAATCACTAGCTTCATCACACCCAACTTGAACTCAAGCGTCTTCCTACTTCCATCCTGAACGTTTTTTTGTGTATAGTTTCATCAAACTTGTGTGTCAAACCATATGCTAGAAGAGAATAATTAAAATAATTAAAAAAAAAACCTCTCTCTCTTCTTTAAAAATAAATATGTATGCACAAGACCCGCATCTAATACAAAAATAAGTAAGTTTACATTACCTCATTTTTCTAAGACCGATCTGCATCTAATACAAAAAACAATAGAAAACCTGCAAGTCTCCCAAAAAGCACTTCCATTGTCTCCAACATTAAGAAAAAAATATTTAGAATTTAGTCTCTAAATTCAAAGTGTATGCAACAAGACCATTCGGATCAAGAACACTACCCTAAACAATGAGTAAATTAACAAAGTCCAACATTAGTTATGGAAGGGAGAGATTCATGGGTATATAAGTAAGGATAATTATTTTCATACACGTAGAGATATGTGGAGTTTTGTTTTCCTTGTCATTATACTTTCAAGTTGTTTAATTTATATACACAAGAATGAGAATTAGATCATGAAATGTCTTATTATTCTCTTAACACTTGTAGGTTCACGCTTTCTTTCCCCACCTATATTATGTAATTTTCTTATTATAGTTATGGTTGATCATGAAATATATTGTCAAAAGGATAGTCTTACATACTAACAAAATGTTTTTGCAACAAATATGCTATTTTTTTTACAAACAAATTGAAGATTGTTTTGTTAGCACTAGTTATTTTTGTAATTTCCTATTTAAGGAATAAAACATTGTTGTCATTTGGTTTAACCTACCATGATAGCAAAATATTAACCATAACATTAGAACGTGTTCTTCCTCGGTAAGATTCTAACAAGATAAACATATGCAACAACTAGTAAAACCACCTTATATTAAAAATGGCTATTTTGGATATATAAATATTCTTACCTTTTGAAGTCTACCCTATCGCAAGTGCCTCACGTTTTAAGTTTTGTAATAGATTTTGTTATCAATGACGACCATGCCAAAGGGAATCACACTTGATTTTATTGGGATTCTCTTGGTTAACTTTAACATGATTGAGGTAACAAATGCAACAGATTACATTGGTTATGATCCAATAAAAGGAGATATTAGTCCTGGATGTAGTAAAAAGCATCCAGAACTTTGTAAATTAACTCCTGCAAATCCATATCAAAGAGGTTGCAATGTAATCCATCGTTGCAGGGCAGGAAATGATATTATAGATGGTGTAGAAGAGGATGCATCCACTAGCTCGGCAATGAGCCCTAATGCAGAACTGCATCTTCATTGA

mRNA sequence

ATGGCTTCGGGAATGGAACTATTAGGTGGACTTGGAAGGTGTTTAGATATGTTGGATCTTAAGATTTTGTTATCAATGACGACCATGCCAAAGGGAATCACACTTGATTTTATTGGGATTCTCTTGGTTAACTTTAACATGATTGAGGTAACAAATGCAACAGATTACATTGGTTATGATCCAATAAAAGGAGATATTAGTCCTGGATGTAGTAAAAAGCATCCAGAACTTTGTAAATTAACTCCTGCAAATCCATATCAAAGAGGTTGCAATGTAATCCATCGTTGCAGGGCAGGAAATGATATTATAGATGGTGTAGAAGAGGATGCATCCACTAGCTCGGCAATGAGCCCTAATGCAGAACTGCATCTTCATTGA

Coding sequence (CDS)

ATGGCTTCGGGAATGGAACTATTAGGTGGACTTGGAAGGTGTTTAGATATGTTGGATCTTAAGATTTTGTTATCAATGACGACCATGCCAAAGGGAATCACACTTGATTTTATTGGGATTCTCTTGGTTAACTTTAACATGATTGAGGTAACAAATGCAACAGATTACATTGGTTATGATCCAATAAAAGGAGATATTAGTCCTGGATGTAGTAAAAAGCATCCAGAACTTTGTAAATTAACTCCTGCAAATCCATATCAAAGAGGTTGCAATGTAATCCATCGTTGCAGGGCAGGAAATGATATTATAGATGGTGTAGAAGAGGATGCATCCACTAGCTCGGCAATGAGCCCTAATGCAGAACTGCATCTTCATTGA

Protein sequence

MASGMELLGGLGRCLDMLDLKILLSMTTMPKGITLDFIGILLVNFNMIEVTNATDYIGYDPIKGDISPGCSKKHPELCKLTPANPYQRGCNVIHRCRAGNDIIDGVEEDASTSSAMSPNAELHLH
Homology
[Close]
BLAST of Lsi06G005950 vs. Swiss-Prot
Match: RLF9_ARATH (Protein RALF-like 9 OS=Arabidopsis thaliana GN=RALFL9 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.7e-08
Identity = 34/74 (45.95%), Postives = 41/74 (55.41%), Query Frame = 1 

Query: 29  MPKGITLDFIGILLVNFNMIEVTN--ATDYIGYDPI-KGDISPGCSKKHPELCKLTPANP 88
           M K I +  + + LV F  +  T   AT YI Y  I +GD +  C K HP  CK   ANP
Sbjct: 3   MSKSIKV-ILSLALVVFLALAATKVEATRYITYPAIDRGDHAVHCDKAHPNTCKKKEANP 62

Query: 89  YQRGCNVIHRCRAG 100
           YQRGC  I+RCR G
Sbjct: 63  YQRGCEKINRCRGG 75

[Close]
BLAST of Lsi06G005950 vs. TrEMBL
Match: A0A0A0L8B1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G426350 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-23
Identity = 61/98 (62.24%), Postives = 71/98 (72.45%), Query Frame = 1 

Query: 29  MPKGITLDFIGILLVNFNMIEVTNATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQ 88
           M K +TL FIGILLV+F+MI +TNA  +I Y  I  GD+SPGCS  HPELC++  ANPYQ
Sbjct: 3   MSKRMTLVFIGILLVSFDMIMITNARKFIDYGSIVAGDVSPGCSPTHPELCRVKSANPYQ 62

Query: 89  RGCNVIHRCRAGNDIIDGVEE----DASTSSAMSPNAE 122
           RGCN I RCR GNDIID  EE    DAS S ++SPN E
Sbjct: 63  RGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNIE 100

[Close]
BLAST of Lsi06G005950 vs. TAIR10
Match: AT1G61566.1 (AT1G61566.1 ralf-like 9)

HSP 1 Score: 58.2 bits (139), Expect = 4.3e-09
Identity = 34/74 (45.95%), Postives = 41/74 (55.41%), Query Frame = 1 

Query: 29  MPKGITLDFIGILLVNFNMIEVTN--ATDYIGYDPI-KGDISPGCSKKHPELCKLTPANP 88
           M K I +  + + LV F  +  T   AT YI Y  I +GD +  C K HP  CK   ANP
Sbjct: 3   MSKSIKV-ILSLALVVFLALAATKVEATRYITYPAIDRGDHAVHCDKAHPNTCKKKEANP 62

Query: 89  YQRGCNVIHRCRAG 100
           YQRGC  I+RCR G
Sbjct: 63  YQRGCEKINRCRGG 75

[Close]
BLAST of Lsi06G005950 vs. NCBI nr
Match: gi|700202865|gb|KGN57998.1| (hypothetical protein Csa_3G426350 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-23
Identity = 61/98 (62.24%), Postives = 71/98 (72.45%), Query Frame = 1 

Query: 29  MPKGITLDFIGILLVNFNMIEVTNATDYIGYDPI-KGDISPGCSKKHPELCKLTPANPYQ 88
           M K +TL FIGILLV+F+MI +TNA  +I Y  I  GD+SPGCS  HPELC++  ANPYQ
Sbjct: 3   MSKRMTLVFIGILLVSFDMIMITNARKFIDYGSIVAGDVSPGCSPTHPELCRVKSANPYQ 62

Query: 89  RGCNVIHRCRAGNDIIDGVEE----DASTSSAMSPNAE 122
           RGCN I RCR GNDIID  EE    DAS S ++SPN E
Sbjct: 63  RGCNRIDRCREGNDIIDAEEEHIEGDASISPSISPNIE 100

The following BLAST results are available for this feature:
BLAST of Lsi06G005950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RLF9_ARATH7.7e-0845.95Protein RALF-like 9 OS=Arabidopsis thaliana GN=RALFL9 PE=3 SV=1[more]
BLAST of Lsi06G005950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8B1_CUCSA1.2e-2362.24Uncharacterized protein OS=Cucumis sativus GN=Csa_3G426350 PE=4 SV=1[more]
BLAST of Lsi06G005950 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G61566.14.3e-0945.95 ralf-like 9[more]
BLAST of Lsi06G005950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700202865|gb|KGN57998.1|1.7e-2362.24hypothetical protein Csa_3G426350 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008801RALF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G005950.1Lsi06G005950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008801Rapid ALkalinization FactorPFAMPF05498RALFcoord: 52..97
score: 2.
NoneNo IPR availablePANTHERPTHR34270FAMILY NOT NAMEDcoord: 27..109
score: 2.7

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi06G005950Wax gourdlsiwgoB520
Lsi06G005950Cucumber (Gy14) v1cgylsiB573
Lsi06G005950Cucurbita maxima (Rimu)cmalsiB073
Lsi06G005950Cucurbita maxima (Rimu)cmalsiB128
Lsi06G005950Cucurbita moschata (Rifu)cmolsiB059
Lsi06G005950Cucurbita moschata (Rifu)cmolsiB118
Lsi06G005950Cucurbita pepo (Zucchini)cpelsiB299
Lsi06G005950Cucurbita pepo (Zucchini)cpelsiB563
Lsi06G005950Wild cucumber (PI 183967)cpilsiB059
Lsi06G005950Cucumber (Chinese Long) v2culsiB058
Lsi06G005950Melon (DHL92) v3.5.1lsimeB396
Lsi06G005950Watermelon (Charleston Gray)lsiwcgB364
Lsi06G005950Watermelon (97103) v1lsiwmB397
Lsi06G005950Cucumber (Gy14) v2cgyblsiB055
Lsi06G005950Melon (DHL92) v3.6.1lsimedB418
Lsi06G005950Silver-seed gourdcarlsiB807
Lsi06G005950Silver-seed gourdcarlsiB886
Lsi06G005950Cucumber (Chinese Long) v3cuclsiB068
Lsi06G005950Watermelon (97103) v2lsiwmbB365