Lsi06G005910 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G005910
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionAcetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic
Locationchr06 : 8089003 .. 8094465 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTAGTCCCACACTTTCTTGCTCTCGTGTTTCCTTTGTGGCTCTTACTGTTTTGTGTTTGCACTTTTCTATTTTCTATTGTGTTATGAATTTGTATTGGATGTGTTTTAACAGTTGGATTGTTCACGCTTGAGAACTAGATTTGTTTTGTACTATTTTATCTCATTCTTTTCATTTGGTGTGGTGAGTTAAAGAATGTGTTATAGATATGGCCATAGGCTCACCAACTAGTGTTGTGGTAGGCATATGAAGCTACTAAAAGAGGCGCCACAAGCACAAGCAAGTCTGAGGACCAAAAGACGGAGCTCGAGAATCAGTGTCGCAGGTACGGTGTTTGGAAAAATCTTTACAACTAGTTTATAAATTTTGTTTATTGAATGTAGTTTGTTGAATGTCTCAATTTAAGTTTTACCTTTGATGCTTCCATTTTCTCTTTCCATCACAACAAGCTTTCAGCTTAACTCGTTTTGTCTTTCACGAAGCTAAGTGTATTTGGATGAAGATTTGTTTATTCCTCTCATTGTGGATTGAAACATATAACTTGACTTTTTTTGGTATCAAGTAATCCGATTTTACTTGACAGTCGATTAATTGACGTTTTGAAACAATCAAACTAATACGGAAAGCAAATTGGAGGCATGAATGCATATTATAAACATGTAGTATAAGCAAGGATCAAAATATTCGTGGATCTGTCGATATATCCGTCAATATATCCGTAAATCGAAGGGTTCAATTTTGATATGAAATATCCATGAATATTTCCAACATATTTTATAAATGCTTGTAAAATATAAAAAATGTATCTATTTAGTCCACAATGAATATCACTACTAATAACGATATCCATAACTTAGTTTTGAAGTAAAAACAACTTAATTGTTAATCTAAATAAATTTTATAAATTTCATGACTAACAGGGATATCCATTGATATCGATATTTTATCGATATATCTGTAAAATTGAAATGTTGATATCGATATTGACATCGATATTTCAATCGTTGAGTATAAGTGAAATTTTTAGGTGGCTTTGATGGTCAAAGTGACACTTAACCACTTTTTAGAAACTTTCTAGGTGACTTGTTATGTTAACTTCGTCCTAAAGGACTTGTCCTTAGAGCTCATAGGAAAAATCTTGGTTGTCTATTAGTTACCATTCGGCTTGATTTTTCCCTTTTTATTTTTTCTTTCATGTCATTTTTGTCTATACTCAATGAGTATTTTGGATGAGCAAGACATTTGTAGTTATTCTTGCAAACTTCTGCAATTCAGATGGTAAAGAAAAATGTTGAATGCTCGGTTTGCCTCTACGATTTTGAAGGTTGGATTTGGCCTACTTGTGATTAAATTTTGATTTTGAACCTATTGTGTGCGATTAAAGTTTGATTCAGAGTGTTTTATTTGAAAAACTAAGTGTTGGATTTAGGTTATTTGTTTCTCCCATCTATTTATTAGTTTATTTCTTTTATTTCAATAATTTTACTTAACTTTTTATTACTTAGCAACTTTTTGTAGGTTGATGAAGGACAATCAATACATGCAATGTCTAGACCACAAACACAACTAAGTTGGAGTTGTTTGGATTTTTGATATCAACATATTTTGTAATTTATAAAGTTTATGTTTTGTTTCATCTCCAAATGTAATAATACTCATTACTATCTCTTTTTTGTTGGGCAATATGAGTCTTGTATGAACACTTATTTAGATATATACATTTTGAACTATATTGATTATAGATATTTTTTATTTGACTATTAATTTGTAATATATAAAACACAATAATAGCAATATGAACACATTCGAGAAACTATAAAAGATGCAGTTATAAGCATTTATTAAAGCGGTTAACAAATGGTGCATTCACTTTTCCATTTTGATCTCTCTAAGTTTTCCTCTCAATCATGCTTTCTCACTCTTCATTTTTTTGTAGGACTAATAGTTTTTCATTGACTGAGGTAAGCTTTAACGAACTTTGAGAGTTTAGGGACTTTATTGATATAATTACAAGTTTCACATGAAGTTTTTCTCAATGAAACATGATGGAGGGTGTAAATGACACGCTTTCCAAAGTTCAAAGTTTATATTGATACAATTATTAGTCCAATTTAGAAGTATAAATTAGTAATTCCCCAATTATCTATTAATTTGAAGATAGTAATATAGATATTTTGCTTTTAATCTTATTCTGATGATTGTAATATTAATTTACACAATTGACTTTGATATGTATCATATTTTATGCATTATTGTATATTAATTAGTTTAAAATAATTATAAACTAAAATTTTAAAATTAATTTTAACCGTGTTGAAAAAATATTAAAACTTAATTAATTATAATTTTTTTAATTCTTTTAAATTAATTAATAGACATTAACACTAAAGACAAAAAGTGAGTATATAACAATAAAAAAAACCAAGGTTGAAAGAGTAAAACTTGAAATCTATGGACCAAATTGAAATAGAACTCAAATGTTAAGGGTAAAGTTGTTATATTCTGAAACATAATGACTAAATTTAAATAAAAAAAGAAACAATAAACTAGCATTTGGGACTAAATTTAAGATTTATTGAAAGTACAGTGACTAAAATTGGATATTTGAAGTATATGAATAAAAAGTTAAACAAACTTCAAAATATAGGGACCAGAATATTATATATTTTAACCAAATATTTATTATCCACCTATGGGAGAAAAGAAACAATTGTTATAAAACAAGAGAATAAAGAACAAAATAGGGATAATAGAAAGTAGAGACCGAATGTATTCTCTATTCAATTGTATCAATCAAAGGTCCCAATGACCACTATTTATAGAGTTTACAAGATATGGAAAAACTAAATATAAAGAGAAGATCAAGGGAAAGATATTGGAAATAATATCTAAGGATATAAAATCTATGGACATCTATATCTAATTCAAATATTTATAACACTCTCCCTTAGATGTCCATAGTGTATAGAATATATATCTCATTAAAACTTTACTAGGAAAAATCCAATGGGATAAAAACCTAGTGAAGGAAAAAGAATACATTATTCGTATACTTTAGTAACTACCTCATTAAAAACCTTGCTATGAAAACCAAGTGGGACAAAACCATAGTCAAGGAAAAAAGAGTGCAGCACATTTACTCCCCCTCATGAAAACATCACTTGATACTCTTGGTTATCACATACAAAAGTTGTGTTAAGTCCTTAAATGTTGTTGCAGAAAATACCTTCGTCAATAAGTCTCCCAAGTCATCTTTTGAAGAAATTCGTTGAGTAGTGATGTCGGTACTTTATGCTTTATCATCTTCATATAAGGATACTATTGGCTTGCTTCGTACATCATCAAGATTATAACATGATTTAAAGTAGTTGTTATGATCTGCTTCATAAGTTGTCATAATAAAAGAATTCTTCTCTCTACTAAGTAACCTGTTTAAGATCTAGTTCTTATGGTTTAGATAAGTAACCTGCATCTTCACAATCAAATAGATCACAAATAGATTTATGAGAATAAAATAAATCCATGCAAACTAATAAAAACATAACATATGTATAACTCTACGCATAACATATTTATATAACCTGATATATAATTATGCTACGACAGGTAGCGTATAAACTAGTAAAGATATAAGTACACTTATTTATCAAAATTATGGTTCTTCGGGACCTAAAGTTCTTCATTATCTTTCTGATATCAGATGTTATAACTTTTTCACACTACGTGAATGAACCATGGTAGGAATGTTCAATGGTGAAACTAGTTCGTATAAGATCTTATATGTATAAATTGATGCAATTCCATATGCTATTTGCAAGCTAAGGAAAAACTTATCATGTCTCATTATAATCAATATCATTTCTTTGCGAAAATTATTGTGGAACTTGTCTCGCATTATATAACGTGACCTCATTCTATTTGTTTTTTTTACAAATATTCACTTGTATCCCACATGTTTGACATTCTCTAATGTTTGAACTACTAGTTCTCACGATTTGTAAAATAAGTTTATTTCTATTGAATTGCTTCTTTCCACAAAAGTCAAACTTTTTTATGTCGCGACATTTTTAATATATATATGAGTATACTCATTTTCATAAATAATATCGTGAGCAACATTGTATGCAAAAATGTTATCAACTTATTTAAGTATGATTCTATCTTTTTCTTGTCATGACATATTTTATCGAGATCTCTTTGTTATCCTCTTTTAATTCAAGATTCTTATGAGTACTCATATTCAGGATTTCTTCTGGAATATCCATATTCTTAACTGAGTCATTTTGATCATTGACTGCCTTTTTATCGAGGATCTTTATCTTTGGAACTCATGTGTCTATCATGCTTTAGGCGTGTTAAAGACCCATTAGTATTGACAACTTGTTGCATTGGGATATTAATTTAGATGGTGCATTTACAACCATTTCATATAACTTGGTCACTTTCTTGCAACAGTAAATGTTGTTCTATAAATGCATCTAGCATTTGATTTGCAATATTTTGCAAATAAATTATCTTTTGAACTTCTAGTTCACATGATAAGGTCTGTGGGACAACAACACCTACTAATTTAATTGACTTAATTGAAAAAACAAATTCTCTTTTGCGAGAACACTAAGTATCACTTCACTATATATAACGGAACCTTTTTTTTTTAAGACCGACTCGTTAGTAGTTAATAATCCTAGTGATTGGATTTAGATCCTATTCTGATAGGAAATGAGATATGCAAATGATTTATTTTTTATCGAATGACTATTCATCTATTGTATTTTCATGTAAATAGGGGCAAGAAAGCTCTATGGAAAAAAGATGGTTAAATTCGATGTTGTCTAACGGGGAGTTAGAATACAGGTGGAGGCTAAGTAAATCAATCAATAGTCTTGGTCCTATTGAAAGTGAAGGATCAATTATAAAGAATATGAAAAAAAACATTCCTAGTCATAGTGATATTTACAATTCTAGTTACAGTACTGTTGATGATTTAGTCGGCATTCGAAATTTCGTATCTGATGACACTGTTTTTAGTTAGGGATAGTAATAGCATCAGTTATTCCATATATTTGGATATTGAAAATCAAATTTTTGAGATTGACAATGATCCTTCTTTTGTAAGTGAACTAGAAAGTTCTTTTTATAGTTTTCAGAACTCTACTTATCAAAATAATGTATCTAAGAGTGATGATTCCCACTATGATCGTTACATGTATGATACTAAATATAGTTGGAATAATCACATTAATAGTTGCATTGACAGTTATCTTCGGGCTCAAATCTGTATTGATAGTTACATTTTAAGTGGTAGTCACAATTACAGTGACAGTTACATTTATAGTTATATTTGTGGTGAAGGTGGAAATAGTAGTGAAAGTGAGAGTTCCAGTATAAGAACTAGCACGGATGGAAGTGATTTAACTAGAACAGAAAGTTCTAATGATCTAGATGTAACTCAAAAATAA

mRNA sequence

ATGGAGCATATGAAGCTACTAAAAGAGGCGCCACAAGCACAAGCAAGTCTGAGGACCAAAAGACGGAGCTCGAGAATCAGTGTCGCAGGTACGGGGCAAGAAAGCTCTATGGAAAAAAGATGGTTAAATTCGATGTTGTCTAACGGGGAGTTAGAATACAGGTGGAGGCTAAGTAAATCAATCAATAGTCTTGGTCCTATTGAAAGTGAAGGATCAATTATAAAGAATATGAAAAAAAACATTCCTAGTCATAGTGATATTTACAATTCTAGTTACATTAGGGATAGTAATAGCATCAGTTATTCCATATATTTGGATATTGAAAATCAAATTTTTGAGATTGACAATGATCCTTCTTTTGTAAGTGAACTAGAAAGTTCTTTTTATAGTTTTCAGAACTCTACTTATCAAAATAATGTATCTAAGAGTGATGATTCCCACTATGATCGTTACATGTATGATACTAAATATAGTTGGAATAATCACATTAATAGTTGCATTGACAGTTATCTTCGGGCTCAAATCTGTATTGATAGTTACATTTTAAGTGGTAGTCACAATTACAGTGACAGTTACATTTATAGTTATATTTGTGGTGAAGGTGGAAATAGTAGTGAAAGTGAGAGTTCCAGTATAAGAACTAGCACGGATGGAAGTGATTTAACTAGAACAGAAAGTTCTAATGATCTAGATGTAACTCAAAAATAA

Coding sequence (CDS)

ATGGAGCATATGAAGCTACTAAAAGAGGCGCCACAAGCACAAGCAAGTCTGAGGACCAAAAGACGGAGCTCGAGAATCAGTGTCGCAGGTACGGGGCAAGAAAGCTCTATGGAAAAAAGATGGTTAAATTCGATGTTGTCTAACGGGGAGTTAGAATACAGGTGGAGGCTAAGTAAATCAATCAATAGTCTTGGTCCTATTGAAAGTGAAGGATCAATTATAAAGAATATGAAAAAAAACATTCCTAGTCATAGTGATATTTACAATTCTAGTTACATTAGGGATAGTAATAGCATCAGTTATTCCATATATTTGGATATTGAAAATCAAATTTTTGAGATTGACAATGATCCTTCTTTTGTAAGTGAACTAGAAAGTTCTTTTTATAGTTTTCAGAACTCTACTTATCAAAATAATGTATCTAAGAGTGATGATTCCCACTATGATCGTTACATGTATGATACTAAATATAGTTGGAATAATCACATTAATAGTTGCATTGACAGTTATCTTCGGGCTCAAATCTGTATTGATAGTTACATTTTAAGTGGTAGTCACAATTACAGTGACAGTTACATTTATAGTTATATTTGTGGTGAAGGTGGAAATAGTAGTGAAAGTGAGAGTTCCAGTATAAGAACTAGCACGGATGGAAGTGATTTAACTAGAACAGAAAGTTCTAATGATCTAGATGTAACTCAAAAATAA

Protein sequence

MEHMKLLKEAPQAQASLRTKRRSSRISVAGTGQESSMEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMKKNIPSHSDIYNSSYIRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYSFQNSTYQNNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYICGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK
Homology
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BLAST of Lsi06G005910 vs. Swiss-Prot
Match: ACCD_CUCSA (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Cucumis sativus GN=accD PE=3 SV=2)

HSP 1 Score: 333.6 bits (854), Expect = 1.8e-90
Identity = 179/214 (83.64%), Postives = 185/214 (86.45%), Query Frame = 1 

Query: 37  MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMKKNIPSHSDIYNSSY---- 96
           MEKRWLNSMLS GELEYR RLSKSINSLGPIESEGSII NM KNIPSHSD YNSSY    
Sbjct: 1   MEKRWLNSMLSKGELEYRCRLSKSINSLGPIESEGSIINNMNKNIPSHSDSYNSSYSTVD 60

Query: 97  ---------------IRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYSFQNSTYQ 156
                          +RDSNS SYSIYLDIENQIFEIDNDPSFVSELESSFYSF+NSTYQ
Sbjct: 61  DLVGIRNFVSDDTFLVRDSNSSSYSIYLDIENQIFEIDNDPSFVSELESSFYSFRNSTYQ 120

Query: 157 NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI 216
           NN+SK+DDSHYDRYMYDTKYSWNNHINSCIDSYLR QICIDSYILSGSHNYSDSYIYSYI
Sbjct: 121 NNISKNDDSHYDRYMYDTKYSWNNHINSCIDSYLRTQICIDSYILSGSHNYSDSYIYSYI 180

Query: 217 CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLD 232
           CGEGGNSSESES SIRTST G++LT TESSNDLD
Sbjct: 181 CGEGGNSSESESFSIRTSTHGNNLTITESSNDLD 214

[Close]
BLAST of Lsi06G005910 vs. Swiss-Prot
Match: ACCD_CARPA (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Carica papaya GN=accD PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.1e-63
Identity = 143/226 (63.27%), Postives = 163/226 (72.12%), Query Frame = 1 

Query: 37  MEKRWLNSMLSNGELEYRWRLSKSINSLGPIE----SEGSIIKNMKKNIPSHSDIYNSSY 96
           MEK W NSMLS GE+EYR  LSKS++SLGPIE    SE  +I +  KNI +     +SSY
Sbjct: 1   MEKSWFNSMLSKGEVEYRCGLSKSMDSLGPIENTSISEDPVINDPDKNIYNSIWGESSSY 60

Query: 97  -----------------------IRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFY 156
                                  +RDSN  SYSIY DIEN  FEIDND SF+SELES FY
Sbjct: 61  YSNVDHLVGAKDIRNFISDDTFLVRDSNRDSYSIYFDIENNNFEIDNDHSFLSELESFFY 120

Query: 157 SFQNSTYQNNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYS 216
           S++NS+Y NN SKSDD HYD YMYDTKYSW NHINSCIDSYLR+QICIDS ILSGS NY+
Sbjct: 121 SYRNSSYMNNRSKSDDPHYDPYMYDTKYSWTNHINSCIDSYLRSQICIDSSILSGSDNYN 180

Query: 217 DSYIYSYICGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK 236
           DSYIY+YIC E G SSESE+S+IRT+T+ SDLT  ESSNDLD+TQK
Sbjct: 181 DSYIYNYICSESGKSSESENSNIRTNTNRSDLTIKESSNDLDITQK 226

[Close]
BLAST of Lsi06G005910 vs. Swiss-Prot
Match: ACCD_MORIN (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Morus indica GN=accD PE=3 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-60
Identity = 144/227 (63.44%), Postives = 164/227 (72.25%), Query Frame = 1 

Query: 37  MEKRWLNSMLSNGELEYRWRLSKSINSLG-PIES----EGSIIKNMKKNIPSHSDIYNSS 96
           MEK   +SML +G LEYR  LSKSINSLG PIE+    E  II +M K+IPS SD  NSS
Sbjct: 1   MEKWRFDSMLFSGVLEYRCGLSKSINSLGDPIENTSVNEDPIINDMDKDIPSGSDSDNSS 60

Query: 97  Y----------------------IRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFY 156
           Y                      +RDSN  SY+IY DIENQIFEIDN  SF+SE E+SFY
Sbjct: 61  YSNVDHLVGVRYIRNFLSDDTFLVRDSNRDSYTIYFDIENQIFEIDNHDSFISEPENSFY 120

Query: 157 SFQNSTYQNNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYS 216
           S+QNS+Y NNVSK+DD  YDRY+YDT+YSWNNHINSCI SYLR QICIDS IL+ S NY+
Sbjct: 121 SYQNSSYLNNVSKNDDPRYDRYVYDTQYSWNNHINSCIGSYLRYQICIDSDILTSSDNYN 180

Query: 217 DSYIYSYICGEGGNSSESESSSIRTSTDGSDLTR-TESSNDLDVTQK 236
           D+YIY+YICGE  NS+ESESS+IRT  D SDLT   ESSNDLDVTQK
Sbjct: 181 DNYIYTYICGERVNSNESESSNIRTGADDSDLTTIRESSNDLDVTQK 227

[Close]
BLAST of Lsi06G005910 vs. Swiss-Prot
Match: ACCD_BUXMI (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Buxus microphylla GN=accD PE=3 SV=2)

HSP 1 Score: 215.7 bits (548), Expect = 5.4e-55
Identity = 137/225 (60.89%), Postives = 155/225 (68.89%), Query Frame = 1 

Query: 37  MEKRWLNSMLSNGELEYRWRLSKSINSLGPIES----EGSIIKNMKKNIPSHSDIYNSS- 96
           MEK W NSMLSN ELE+   LSKS+ SLGPI +    E  II NM KNI S  D  +SS 
Sbjct: 1   MEKWWFNSMLSNEELEHACGLSKSMESLGPIGNTSGGEDHIINNMDKNIHSWGDSGSSSC 60

Query: 97  ---------------------YIRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYS 156
                                 +RDSN  SYSIY DIEN+IFEIDND SF+SELESSF  
Sbjct: 61  SNVYPLFGVRGIQGFISDDTFLVRDSNGDSYSIYFDIENKIFEIDNDHSFLSELESSF-- 120

Query: 157 FQNSTYQNNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSD 216
              S+YQNN S SD+ +YDRY+YDTKYSWNN+INSCIDSYLR++I IDSYILSGS NYSD
Sbjct: 121 ---SSYQNNGSNSDNPYYDRYIYDTKYSWNNYINSCIDSYLRSEIRIDSYILSGSDNYSD 180

Query: 217 SYIYSYICGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK 236
           SYIYSYIC E  NS  SESSSI+TST+GSDL      NDLD+ +K
Sbjct: 181 SYIYSYICSECVNS--SESSSIKTSTNGSDLNIRGRYNDLDLNKK 218

[Close]
BLAST of Lsi06G005910 vs. Swiss-Prot
Match: ACCD_PANGI (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Panax ginseng GN=accD PE=3 SV=2)

HSP 1 Score: 214.9 bits (546), Expect = 9.3e-55
Identity = 133/225 (59.11%), Postives = 151/225 (67.11%), Query Frame = 1 

Query: 37  MEKRWLNSMLSNGELEYRWRLSKSINSLGPIE----SEGSIIKNMKKNIPSHSDIYNSSY 96
           ME+ W NS+L   E E+R  LSKS  SLGPIE    SE   I +MKKNI S     NS+Y
Sbjct: 1   MERWWFNSILFKKEFEHRCGLSKSTGSLGPIENTSESEDPNINDMKKNIHSWGGRDNSNY 60

Query: 97  ----------------------IRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYS 156
                                 +RDSN  SYSIY DIEN IFEIDN  SF SELESSFYS
Sbjct: 61  SNVDHLFGVKDIRNFISDETFLVRDSNGNSYSIYFDIENHIFEIDNGHSFQSELESSFYS 120

Query: 157 FQNSTYQNNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSD 216
           +QNS+Y+NN S SDD HYD YMYDT+YSWNN+INSCID+YL++QI I++ I+SGS NYS+
Sbjct: 121 YQNSSYRNNGSNSDDPHYDHYMYDTQYSWNNNINSCIDNYLQSQIFIETDIVSGSDNYSN 180

Query: 217 SYIYSYICGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK 236
           SYIYS ICG      E   S IRT TDGSDLT  ESSNDLDVTQK
Sbjct: 181 SYIYSSICG------EIAGSGIRTRTDGSDLTIRESSNDLDVTQK 219

[Close]
BLAST of Lsi06G005910 vs. TrEMBL
Match: X2EYN8_LAGSI (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Lagenaria siceraria GN=accD PE=3 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 2.8e-98
Identity = 195/218 (89.45%), Postives = 197/218 (90.37%), Query Frame = 1 

Query: 37  MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMKKNIPSHSDIYNSSY---- 96
           MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNM KNIPSHSD YNSSY    
Sbjct: 1   MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMNKNIPSHSDSYNSSYSTVD 60

Query: 97  ---------------IRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYSFQNSTYQ 156
                          +RDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYSF+NSTYQ
Sbjct: 61  DLVGIRNFVSDDTFLVRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYSFRNSTYQ 120

Query: 157 NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI 216
           NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI
Sbjct: 121 NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI 180

Query: 217 CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK 236
           CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK
Sbjct: 181 CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK 218

[Close]
BLAST of Lsi06G005910 vs. TrEMBL
Match: X2F3Y8_LAGSI (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Lagenaria siceraria GN=accD PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.3e-97
Identity = 194/218 (88.99%), Postives = 196/218 (89.91%), Query Frame = 1 

Query: 37  MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMKKNIPSHSDIYNSSY---- 96
           MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNM KNIPSHSD YNSSY    
Sbjct: 1   MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMNKNIPSHSDSYNSSYSTVD 60

Query: 97  ---------------IRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYSFQNSTYQ 156
                          +RDSNSISYSIYLDIENQIFEIDND SFVSELESSFYSF+NSTYQ
Sbjct: 61  DLVGIRNFVSDDTFLVRDSNSISYSIYLDIENQIFEIDNDSSFVSELESSFYSFRNSTYQ 120

Query: 157 NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI 216
           NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI
Sbjct: 121 NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI 180

Query: 217 CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK 236
           CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK
Sbjct: 181 CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK 218

[Close]
BLAST of Lsi06G005910 vs. TrEMBL
Match: X2F717_LAGSI (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Lagenaria siceraria GN=accD PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 2.3e-97
Identity = 194/218 (88.99%), Postives = 196/218 (89.91%), Query Frame = 1 

Query: 37  MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMKKNIPSHSDIYNSSY---- 96
           MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNM KNIPSHSD YNSSY    
Sbjct: 1   MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMNKNIPSHSDSYNSSYSTVD 60

Query: 97  ---------------IRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYSFQNSTYQ 156
                          +RDSNSISYSIYLDIENQIFEIDND SFVSELESSFYSF+NSTYQ
Sbjct: 61  DLVGIRNFVSDDTFLVRDSNSISYSIYLDIENQIFEIDNDSSFVSELESSFYSFRNSTYQ 120

Query: 157 NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI 216
           NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI
Sbjct: 121 NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI 180

Query: 217 CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK 236
           CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK
Sbjct: 181 CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK 218

[Close]
BLAST of Lsi06G005910 vs. TrEMBL
Match: W8E133_9ROSI (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Cucumis hystrix GN=accD PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 2.0e-88
Identity = 179/214 (83.64%), Postives = 185/214 (86.45%), Query Frame = 1 

Query: 37  MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMKKNIPSHSDIYNSSY---- 96
           MEKRWLNSMLS GELEYR RLSKSINSLGPIESEGSII NM KNIPSHSD YNSSY    
Sbjct: 1   MEKRWLNSMLSKGELEYRCRLSKSINSLGPIESEGSIINNMNKNIPSHSDSYNSSYSTVD 60

Query: 97  ---------------IRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYSFQNSTYQ 156
                          +RDSNS SYSIYLDIENQIFEIDNDPSFVSELESSFYSF+NSTYQ
Sbjct: 61  DLVGIRNFVSDDTFLVRDSNSSSYSIYLDIENQIFEIDNDPSFVSELESSFYSFRNSTYQ 120

Query: 157 NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI 216
           NN+SK+DDSHYDRYMYDTKYSWNNHINSCIDSYLR QICIDSYILSGSHNYSDSYIYSYI
Sbjct: 121 NNISKNDDSHYDRYMYDTKYSWNNHINSCIDSYLRTQICIDSYILSGSHNYSDSYIYSYI 180

Query: 217 CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLD 232
           CGEGGNSSESES SIRTST G++LT TESSNDLD
Sbjct: 181 CGEGGNSSESESFSIRTSTHGNNLTITESSNDLD 214

[Close]
BLAST of Lsi06G005910 vs. TrEMBL
Match: A0A109WWJ4_GYNPE (Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic OS=Gynostemma pentaphyllum GN=accD PE=3 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 5.4e-86
Identity = 180/222 (81.08%), Postives = 186/222 (83.78%), Query Frame = 1 

Query: 37  MEKRWLNSMLSNGELEYRWRLSKSINSLGPIE----SEGSIIKNMKKNIPSHSDIYNSSY 96
           MEKRWLNSMLSNGELEYR RLSKSI+SLGPIE    SEG  I +M KNIPSHSD  NSSY
Sbjct: 1   MEKRWLNSMLSNGELEYRCRLSKSIDSLGPIENTSISEGPFINDMNKNIPSHSDSDNSSY 60

Query: 97  -------------------IRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYSFQN 156
                              +RDSNS SYSIYLDIENQIFEIDNDPSFVSELESSFYSF N
Sbjct: 61  STVDDLVGIRNFVSDDTFLVRDSNSSSYSIYLDIENQIFEIDNDPSFVSELESSFYSFHN 120

Query: 157 STYQNNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYI 216
           S YQ NVS SD+SHYDRYMYDTKYSWNN+INSCIDSYLRAQICIDSYILSGSHNYSDSYI
Sbjct: 121 SIYQKNVSNSDNSHYDRYMYDTKYSWNNNINSCIDSYLRAQICIDSYILSGSHNYSDSYI 180

Query: 217 YSYICGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK 236
           YSYICGEGGNSSESESS IRTSTDGSDLTRTESSNDLD+TQK
Sbjct: 181 YSYICGEGGNSSESESSCIRTSTDGSDLTRTESSNDLDLTQK 222

[Close]
BLAST of Lsi06G005910 vs. TAIR10
Match: ATCG00500.1 (ATCG00500.1 acetyl-CoA carboxylase carboxyl transferase subunit beta)

HSP 1 Score: 155.2 bits (391), Expect = 4.9e-38
Identity = 104/228 (45.61%), Postives = 138/228 (60.53%), Query Frame = 1 

Query: 37  MEKRWLNSMLSNGELEYRWRLSKSINSLGPIE----SEGSIIKNMKKNI------PSHSD 96
           MEK W N M S GELEYR  LSK+++S  P E    S+   I +M KN        S+S 
Sbjct: 1   MEKSWFNFMFSKGELEYRGELSKAMDSFAPGEKTTISQDRFIYDMDKNFYGWDERSSYSS 60

Query: 97  IYNSS-------------------YIRDSNSISYSIYLDIENQIFEIDNDPSFVSELESS 156
            Y+++                   ++RDSN  SYSI+ D + +IFEIDND    S+LE  
Sbjct: 61  SYSNNVDLLVSSKDIRNFISDDTFFVRDSNKNSYSIFFDKKKKIFEIDND---FSDLEKF 120

Query: 157 FYSFQNSTYQNNVSKSD-DSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSH 216
           FYS+ +S+Y NN SK D D HYD Y+ DTKY+  NHINSCIDSY R+ ICID+  L  S+
Sbjct: 121 FYSYCSSSYLNNRSKGDNDLHYDPYIKDTKYNCTNHINSCIDSYFRSYICIDNNFLIDSN 180

Query: 217 NYSDSYIYSYICGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQ 235
           N+++SYIY++IC E G   ES++  IRT+ + S+L    SS D D+TQ
Sbjct: 181 NFNESYIYNFICSESGKIRESKNYKIRTNRNRSNLI---SSKDFDITQ 222

[Close]
BLAST of Lsi06G005910 vs. NCBI nr
Match: gi|595645582|gb|AHM89039.1| (acetyl-CoA carboxylase carbosyltransferase beta subunit (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 366.3 bits (939), Expect = 4.0e-98
Identity = 195/218 (89.45%), Postives = 197/218 (90.37%), Query Frame = 1 

Query: 37  MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMKKNIPSHSDIYNSSY---- 96
           MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNM KNIPSHSD YNSSY    
Sbjct: 1   MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMNKNIPSHSDSYNSSYSTVD 60

Query: 97  ---------------IRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYSFQNSTYQ 156
                          +RDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYSF+NSTYQ
Sbjct: 61  DLVGIRNFVSDDTFLVRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYSFRNSTYQ 120

Query: 157 NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI 216
           NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI
Sbjct: 121 NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI 180

Query: 217 CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK 236
           CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK
Sbjct: 181 CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK 218

[Close]
BLAST of Lsi06G005910 vs. NCBI nr
Match: gi|595646544|gb|AHM89985.1| (acetyl-CoA carboxylase carbosyltransferase beta subunit (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 363.2 bits (931), Expect = 3.4e-97
Identity = 194/218 (88.99%), Postives = 196/218 (89.91%), Query Frame = 1 

Query: 37  MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMKKNIPSHSDIYNSSY---- 96
           MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNM KNIPSHSD YNSSY    
Sbjct: 1   MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMNKNIPSHSDSYNSSYSTVD 60

Query: 97  ---------------IRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYSFQNSTYQ 156
                          +RDSNSISYSIYLDIENQIFEIDND SFVSELESSFYSF+NSTYQ
Sbjct: 61  DLVGIRNFVSDDTFLVRDSNSISYSIYLDIENQIFEIDNDSSFVSELESSFYSFRNSTYQ 120

Query: 157 NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI 216
           NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI
Sbjct: 121 NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI 180

Query: 217 CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK 236
           CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK
Sbjct: 181 CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK 218

[Close]
BLAST of Lsi06G005910 vs. NCBI nr
Match: gi|595645227|gb|AHM88690.1| (acetyl-CoA carboxylase carbosyltransferase beta subunit (chloroplast) [Lagenaria siceraria])

HSP 1 Score: 363.2 bits (931), Expect = 3.4e-97
Identity = 194/218 (88.99%), Postives = 196/218 (89.91%), Query Frame = 1 

Query: 37  MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMKKNIPSHSDIYNSSY---- 96
           MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNM KNIPSHSD YNSSY    
Sbjct: 1   MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMNKNIPSHSDSYNSSYSTVD 60

Query: 97  ---------------IRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYSFQNSTYQ 156
                          +RDSNSISYSIYLDIENQIFEIDND SFVSELESSFYSF+NSTYQ
Sbjct: 61  DLVGIRNFVSDDTFLVRDSNSISYSIYLDIENQIFEIDNDSSFVSELESSFYSFRNSTYQ 120

Query: 157 NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI 216
           NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI
Sbjct: 121 NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI 180

Query: 217 CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK 236
           CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK
Sbjct: 181 CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLDVTQK 218

[Close]
BLAST of Lsi06G005910 vs. NCBI nr
Match: gi|68164812|ref|YP_247608.1| (acetyl-CoA carboxylase beta subunit [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 2.9e-88
Identity = 179/214 (83.64%), Postives = 185/214 (86.45%), Query Frame = 1 

Query: 37  MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMKKNIPSHSDIYNSSY---- 96
           MEKRWLNSMLS GELEYR RLSKSINSLGPIESEGSII NM KNIPSHSD YNSSY    
Sbjct: 1   MEKRWLNSMLSKGELEYRCRLSKSINSLGPIESEGSIINNMNKNIPSHSDSYNSSYSTVD 60

Query: 97  ---------------IRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYSFQNSTYQ 156
                          +RDSNS SYSIYLDIENQIFEIDNDPSFVSELESSFYSF+NSTYQ
Sbjct: 61  DLVGIRNFVSDDTFLVRDSNSSSYSIYLDIENQIFEIDNDPSFVSELESSFYSFRNSTYQ 120

Query: 157 NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI 216
           NN+SK+DDSHYDRYMYDTKYSWNNHINSCIDSYLR QICIDSYILSGSHNYSDSYIYSYI
Sbjct: 121 NNISKNDDSHYDRYMYDTKYSWNNHINSCIDSYLRTQICIDSYILSGSHNYSDSYIYSYI 180

Query: 217 CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLD 232
           CGEGGNSSESES SIRTST G++LT TESSNDLD
Sbjct: 181 CGEGGNSSESESFSIRTSTHGNNLTITESSNDLD 214

[Close]
BLAST of Lsi06G005910 vs. NCBI nr
Match: gi|590000424|ref|YP_009004053.1| (Acetyl-CoA carboxylase carboxyltransferase beta subunit [Cucumis hystrix])

HSP 1 Score: 333.6 bits (854), Expect = 2.9e-88
Identity = 179/214 (83.64%), Postives = 185/214 (86.45%), Query Frame = 1 

Query: 37  MEKRWLNSMLSNGELEYRWRLSKSINSLGPIESEGSIIKNMKKNIPSHSDIYNSSY---- 96
           MEKRWLNSMLS GELEYR RLSKSINSLGPIESEGSII NM KNIPSHSD YNSSY    
Sbjct: 1   MEKRWLNSMLSKGELEYRCRLSKSINSLGPIESEGSIINNMNKNIPSHSDSYNSSYSTVD 60

Query: 97  ---------------IRDSNSISYSIYLDIENQIFEIDNDPSFVSELESSFYSFQNSTYQ 156
                          +RDSNS SYSIYLDIENQIFEIDNDPSFVSELESSFYSF+NSTYQ
Sbjct: 61  DLVGIRNFVSDDTFLVRDSNSSSYSIYLDIENQIFEIDNDPSFVSELESSFYSFRNSTYQ 120

Query: 157 NNVSKSDDSHYDRYMYDTKYSWNNHINSCIDSYLRAQICIDSYILSGSHNYSDSYIYSYI 216
           NN+SK+DDSHYDRYMYDTKYSWNNHINSCIDSYLR QICIDSYILSGSHNYSDSYIYSYI
Sbjct: 121 NNISKNDDSHYDRYMYDTKYSWNNHINSCIDSYLRTQICIDSYILSGSHNYSDSYIYSYI 180

Query: 217 CGEGGNSSESESSSIRTSTDGSDLTRTESSNDLD 232
           CGEGGNSSESES SIRTST G++LT TESSNDLD
Sbjct: 181 CGEGGNSSESESFSIRTSTHGNNLTITESSNDLD 214

The following BLAST results are available for this feature:
BLAST of Lsi06G005910 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ACCD_CUCSA1.8e-9083.64Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O... [more]
ACCD_CARPA1.1e-6363.27Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O... [more]
ACCD_MORIN1.1e-6063.44Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O... [more]
ACCD_BUXMI5.4e-5560.89Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O... [more]
ACCD_PANGI9.3e-5559.11Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O... [more]
BLAST of Lsi06G005910 vs. TrEMBL
Match NameE-valueIdentityDescription
X2EYN8_LAGSI2.8e-9889.45Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O... [more]
X2F3Y8_LAGSI2.3e-9788.99Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O... [more]
X2F717_LAGSI2.3e-9788.99Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O... [more]
W8E133_9ROSI2.0e-8883.64Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Cucumis hystr... [more]
A0A109WWJ4_GYNPE5.4e-8681.08Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic O... [more]
BLAST of Lsi06G005910 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00500.14.9e-3845.61ATCG00500.1 acetyl-CoA carboxylase carboxyl transferase subunit beta[more]
BLAST of Lsi06G005910 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|595645582|gb|AHM89039.1|4.0e-9889.45acetyl-CoA carboxylase carbosyltransferase beta subunit (chloroplast) [Lagenaria... [more]
gi|595646544|gb|AHM89985.1|3.4e-9788.99acetyl-CoA carboxylase carbosyltransferase beta subunit (chloroplast) [Lagenaria... [more]
gi|595645227|gb|AHM88690.1|3.4e-9788.99acetyl-CoA carboxylase carbosyltransferase beta subunit (chloroplast) [Lagenaria... [more]
gi|68164812|ref|YP_247608.1|2.9e-8883.64acetyl-CoA carboxylase beta subunit [Cucumis sativus][more]
gi|590000424|ref|YP_009004053.1|2.9e-8883.64Acetyl-CoA carboxylase carboxyltransferase beta subunit [Cucumis hystrix][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:2001295 malonyl-CoA biosynthetic process
biological_process GO:0006090 pyruvate metabolic process
cellular_component GO:0009317 acetyl-CoA carboxylase complex
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0003989 acetyl-CoA carboxylase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G005910.1Lsi06G005910.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22855ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATEDcoord: 111..234
score: 1.8
NoneNo IPR availablePANTHERPTHR22855:SF15ACETYL-COENZYME A CARBOXYLASE CARBOXYL TRANSFERASE SUBUNIT BETA, CHLOROPLASTICcoord: 111..234
score: 1.8

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi06G005910Cucumber (Gy14) v1cgylsiB573
Lsi06G005910Cucurbita maxima (Rimu)cmalsiB073
Lsi06G005910Cucurbita maxima (Rimu)cmalsiB128
Lsi06G005910Cucurbita moschata (Rifu)cmolsiB059
Lsi06G005910Cucurbita moschata (Rifu)cmolsiB118
Lsi06G005910Cucurbita pepo (Zucchini)cpelsiB299
Lsi06G005910Cucurbita pepo (Zucchini)cpelsiB563
Lsi06G005910Wild cucumber (PI 183967)cpilsiB059
Lsi06G005910Cucumber (Chinese Long) v2culsiB058
Lsi06G005910Melon (DHL92) v3.5.1lsimeB396
Lsi06G005910Watermelon (Charleston Gray)lsiwcgB364
Lsi06G005910Watermelon (97103) v1lsiwmB397
Lsi06G005910Cucumber (Gy14) v2cgyblsiB055
Lsi06G005910Melon (DHL92) v3.6.1lsimedB418
Lsi06G005910Silver-seed gourdcarlsiB807
Lsi06G005910Silver-seed gourdcarlsiB886
Lsi06G005910Cucumber (Chinese Long) v3cuclsiB068
Lsi06G005910Watermelon (97103) v2lsiwmbB365
Lsi06G005910Wax gourdlsiwgoB520