Lsi06G005900 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G005900
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	26S proteasome regulatory subunit
Location	chr06 : 8024977 .. 8028443 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTACCCACCTCCGGCAATCGCCATTTATTCCCTTTTAAGAACCAGACGAGAGAAGTCTTGTTGCGAAAGAAAGTTCAAGTCTTGCATGTCCGGCAGCCGGAAAGATCGACGCCGAGGGAAAACTTTACAGATGGAGCGGCTACAGAGAATGTTCGCCGGTGCCGGAGGTTCATTGGGGCACCCGCCGCCGGACTCGCCCACTCTTGATTCGTCAGAGCAGGTCTACATCTCCTCGCTCGCGCTTCTGAAGATGCTTAAGCACGGTACTGTTCGAATTGAAGTTGCCACTTTCTTGTTTCTTCGGCTCTTATTCTTTCGGATGTGTTCACAATCTATTACTCTTGTACAATCAACGAATTTGGATGGATTTGCTCGGTTTTAGGTTTAGGATGTATGATATAGTTTAGGTTATTGGTAATTAAGATCGTGAAGCTTTAAATAAACTTTTCGTTTATCTAATTTTCCACTTCAATGTGCGTAATAGGAAGAGCTGGGGTTCCAATGGAGGTGATGGGTTTGATGCTGGGGGAATTTGTTGACGAGTACACCGTGCGTGTGGTCGATGTATTTGCTATGCCGCAAAGTGGTACGGGTGTTAGTGTCGAAGCTGTTGATCATGTATTCCAGACCAATATGCTTGACATGCTCAAACAAACTGGACGGTAATTTTCCTTACGTATATAGATTGAGATTTGTAATGACAACATTGCTGCAGAAAACCTCTTAAAGGTTAAGTTGCTGAAAATGAAACTTCAGATTTTATTTCTATGTCCTGCCTGTGGTGTCTGGTGGGAGGCCTTGTGCTGTCCAGTGCGTGTTTATTTTTTGGAATAGACCTGATTTTAGCATAAAACTTACATAGGCTTACTTAAATTTCATTGAAAACTATGCAAATGAATATTTAGTGGGTCCTAGGATGGTTAAACTTTAGCCAATAAGAAAATCTTTTGATGTCCATTTCTCTGTTAAACAATTTGCACATACACTTTGAAGGGATTTTAGTTGGCTGGCCTGCAATGTTCTTTCCTATTTATGCCATTGGGCCTTCGTTTGTCAAGAATCAGAATCAGAGTCATTTCTCATGCTGAACCCAACTCTTTACTTCTCTTAGGAACTGACTCCCTGAATGTGGGCTCAATTCATTTTAATTTTATTGTCATTCCCGTTTCCATGGTGCACCTGATATTATCTTCTATTATAAAAATTTACTTGGTTGTGCCCCTTGTTTCATTTGAATGACTCCCCATTTTTAGGCTTCTCCCCAACATTTTTAGTTTAGCTTTAGTTTTGGTTTTGATCTGGTATGTCAGTTGACATTTTCATCGAATGAAGGTTAGAATTAAATAAAGTAATGAGTTCAAGGAAGTCAGTCCTCAACATAGTATGCATGACCTCTATATCATTCTCACCCTAGAGGGAAAAGAAACCCCTCTTTGATTCTAAATTCCGATTTCCTCTCATTCAATTCCCAATGAGGGAAAGTGGGAATAAGCATGAAGAGTCTGATAGCGTTCCTATCAAGCATGTGTACAAGTGGAGGTGTCTGAGGATAGGGAAGGGAATATCTTCTGTAATTAGTTAGTTAAATGGGCCCATGAGAATATGTAGCTAACCATGGGCTAACGGAGGGGGGTGTACTTAAGGGTAAGAGTAGGCCTTTTGAGGAGGTTCATTTTTGCTCATCTGTGATTCGAGAGTGTTTTGGGAGATATGGGAAGCTCCTCAATTCTTCCTTTGTTCATGTATCTCTATTAATAGTTAAATCCAGCCTTATCAGAGTCCAGTCTTTTCTACTTCAATTGTACTGTTACTGAAGAATGAAGATTGAACTCATTAGTGACCGATAATCTTCAATATGATTTTTTTGTCTTCAGCCCTGAGATGGTTGTAGGATGGTACCACTCTCATCCTGGATTTGGATGTTGGCTCTCTGGTGTCGACATCAATACTCAACAGGTTTGTGGTTTTAAAACAGCCTCCATTTTACATATTGTTATCGACCTTATTGTTGAATCTTTCTAGGGGGTGAATGCCTTTTCTTTGTCTTGTATATTTTATTTTTATCTATCCAGGGATTTTGATCTTTTGTAATAATTTTTTTACTGTATGTTTTCTTTTATTGGGTGGTCTTCCAGCTACAGAAAAAGTGTAATAAAGATTTGCAATTGAGATTAAAATGTGAAATGTGCTTTCTTTTGTTATCATTTGCAGAGCTTTGAAGCTCTTAATCAGCGAGCTGTTGCCGTAGTTGTGGATCCAATCCAAAGTGTTAAGGGAAAGGTGGTTATCGATGCCTTTCGTCTAATTAATCCCCAGACAATGATGCTTGGCCAAGAACCACGACAAACAACATCAAACCTTGGCCATCTTAATAAACCATCTATACAAGTGAGTATTGAACAACTACAATTAAATCATTCTAGCGTTCAATCTACTGACTCATACCATTGTTTTCAGGCATTAATCCATGGATTGAATCGCCATTATTACTCTATTGCAATTAACTATAGGAAAAATGAACTTGAAGAGAAGATGTTGCTTAATCTTCACAAGAAGAAATGGACTGATGGGCTAACACTTCGACGATTTGATACGCACTCAAAAACTAATGAGCAGACTGTTCAGGTAAGGAAATGTCTTTTAAGTTTTAACCTTCTAGAGGTTGCATCTCTTCTTACAATATTAAATAAAATGAGTTTCTTGTATTGCCAAACAATTTAATTGCTCTCTGATTGTACTAATGTCTTACGAATCTTGACAATGTAAAGAGTGATGATTTCATCTAGTCAAAAAATGGGTTGTGATCAATTATCTTCACGATTCACTTTTCATAGCTAAATCTGATAAACTTGCACACAGCAGGGGGTGTATTTCATTGTACATAATCTATGTTCTGATTTATGGGTATGGTATGCCGTGCAGGAAATGCTGAACTTGGCTGTCAAGTACAACAAGGCAGTACAAGAGGAAGATGAGTTGCCACCAGAGAAACTTGCAATTGCAAACGTGGGAAGGCAAGATGCCAAGAAGCACCTGGAAGAACATGTCTCCAATTTGATGTCATCAAACATCATACAGACATTAGGAACGATGCTCGATACAGTTGTGTTTTAATCGAACTATGGTTGTTAAAGAACTGAACGTCCCCTGCCAGAAACACTTAGAAGATTCTTCGTTCAAAGTTGCAGGGTTTGTGACTATTAAACAAGCTAAAGAGTGTTTAAAACTCTTCATTAATATTTTATTGGATCTTAGGATGAGAGGTGGTTTCGTTTTTACAGGACAGCTATTTGTTACAATGCTTGAGATGTGAATCAAAAGATAATTAATAGTGTTTATAATCTGTCGGTTTCGCAGCTAAAACATAATAATTTTGAATGTTTAATCTTCATTTAGGAAGAAAGACAAACGTTTGATGAGGGCCTTGGCTTTCTCAGAAGTGGGATCTAACATATGAAATGCATG

mRNA sequence

GTTTACCCACCTCCGGCAATCGCCATTTATTCCCTTTTAAGAACCAGACGAGAGAAGTCTTGTTGCGAAAGAAAGTTCAAGTCTTGCATGTCCGGCAGCCGGAAAGATCGACGCCGAGGGAAAACTTTACAGATGGAGCGGCTACAGAGAATGTTCGCCGGTGCCGGAGGTTCATTGGGGCACCCGCCGCCGGACTCGCCCACTCTTGATTCGTCAGAGCAGGTCTACATCTCCTCGCTCGCGCTTCTGAAGATGCTTAAGCACGGAAGAGCTGGGGTTCCAATGGAGGTGATGGGTTTGATGCTGGGGGAATTTGTTGACGAGTACACCGTGCGTGTGGTCGATGTATTTGCTATGCCGCAAAGTGGTACGGGTGTTAGTGTCGAAGCTGTTGATCATGTATTCCAGACCAATATGCTTGACATGCTCAAACAAACTGGACGCCCTGAGATGGTTGTAGGATGGTACCACTCTCATCCTGGATTTGGATGTTGGCTCTCTGGTGTCGACATCAATACTCAACAGAGCTTTGAAGCTCTTAATCAGCGAGCTGTTGCCGTAGTTGTGGATCCAATCCAAAGTGTTAAGGGAAAGGTGGTTATCGATGCCTTTCGTCTAATTAATCCCCAGACAATGATGCTTGGCCAAGAACCACGACAAACAACATCAAACCTTGGCCATCTTAATAAACCATCTATACAAGCATTAATCCATGGATTGAATCGCCATTATTACTCTATTGCAATTAACTATAGGAAAAATGAACTTGAAGAGAAGATGTTGCTTAATCTTCACAAGAAGAAATGGACTGATGGGCTAACACTTCGACGATTTGATACGCACTCAAAAACTAATGAGCAGACTGTTCAGGAAATGCTGAACTTGGCTGTCAAGTACAACAAGGCAGTACAAGAGGAAGATGAGTTGCCACCAGAGAAACTTGCAATTGCAAACGTGGGAAGGCAAGATGCCAAGAAGCACCTGGAAGAACATGTCTCCAATTTGATGTCATCAAACATCATACAGACATTAGGAACGATGCTCGATACAGTTGTGTTTTAATCGAACTATGGTTGTTAAAGAACTGAACGTCCCCTGCCAGAAACACTTAGAAGATTCTTCGTTCAAAGTTGCAGGGTTTGTGACTATTAAACAAGCTAAAGAGTGTTTAAAACTCTTCATTAATATTTTATTGGATCTTAGGATGAGAGGTGGTTTCGTTTTTACAGGACAGCTATTTGTTACAATGCTTGAGATGTGAATCAAAAGATAATTAATAGTGTTTATAATCTGTCGGTTTCGCAGCTAAAACATAATAATTTTGAATGTTTAATCTTCATTTAGGAAGAAAGACAAACGTTTGATGAGGGCCTTGGCTTTCTCAGAAGTGGGATCTAACATATGAAATGCATG

Coding sequence (CDS)

ATGTCCGGCAGCCGGAAAGATCGACGCCGAGGGAAAACTTTACAGATGGAGCGGCTACAGAGAATGTTCGCCGGTGCCGGAGGTTCATTGGGGCACCCGCCGCCGGACTCGCCCACTCTTGATTCGTCAGAGCAGGTCTACATCTCCTCGCTCGCGCTTCTGAAGATGCTTAAGCACGGAAGAGCTGGGGTTCCAATGGAGGTGATGGGTTTGATGCTGGGGGAATTTGTTGACGAGTACACCGTGCGTGTGGTCGATGTATTTGCTATGCCGCAAAGTGGTACGGGTGTTAGTGTCGAAGCTGTTGATCATGTATTCCAGACCAATATGCTTGACATGCTCAAACAAACTGGACGCCCTGAGATGGTTGTAGGATGGTACCACTCTCATCCTGGATTTGGATGTTGGCTCTCTGGTGTCGACATCAATACTCAACAGAGCTTTGAAGCTCTTAATCAGCGAGCTGTTGCCGTAGTTGTGGATCCAATCCAAAGTGTTAAGGGAAAGGTGGTTATCGATGCCTTTCGTCTAATTAATCCCCAGACAATGATGCTTGGCCAAGAACCACGACAAACAACATCAAACCTTGGCCATCTTAATAAACCATCTATACAAGCATTAATCCATGGATTGAATCGCCATTATTACTCTATTGCAATTAACTATAGGAAAAATGAACTTGAAGAGAAGATGTTGCTTAATCTTCACAAGAAGAAATGGACTGATGGGCTAACACTTCGACGATTTGATACGCACTCAAAAACTAATGAGCAGACTGTTCAGGAAATGCTGAACTTGGCTGTCAAGTACAACAAGGCAGTACAAGAGGAAGATGAGTTGCCACCAGAGAAACTTGCAATTGCAAACGTGGGAAGGCAAGATGCCAAGAAGCACCTGGAAGAACATGTCTCCAATTTGATGTCATCAAACATCATACAGACATTAGGAACGATGCTCGATACAGTTGTGTTTTAA

Protein sequence

MSGSRKDRRRGKTLQMERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTLGTMLDTVVF

Homology

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BLAST of Lsi06G005900 vs. Swiss-Prot
Match: PSDE_ARATH (26S proteasome non-ATPase regulatory subunit 14 homolog OS=Arabidopsis thaliana GN=RPN11 PE=1 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 1.2e-166
Identity = 296/309 (95.79%), Postives = 301/309 (97.41%), Query Frame = 1


Query: 16  MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 75
           MERLQR+F GAGG LGH  PDSPTLD+SEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
Sbjct: 1   MERLQRIF-GAGGGLGHASPDSPTLDTSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 60

Query: 76  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 135
           FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC
Sbjct: 61  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 120

Query: 136 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 195
           WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFR INPQT+MLGQEPRQTTSN
Sbjct: 121 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIMLGQEPRQTTSN 180

Query: 196 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 255
           LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT
Sbjct: 181 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 240

Query: 256 NEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 315
           NEQTVQEML+LA KYNKAVQEEDEL PEKLAI NVGRQDAKKHLEEHVSNLMSSNI+QTL
Sbjct: 241 NEQTVQEMLSLAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKHLEEHVSNLMSSNIVQTL 300

Query: 316 GTMLDTVVF 325
           GTMLDTVVF
Sbjct: 301 GTMLDTVVF 308

[Close]

BLAST of Lsi06G005900 vs. Swiss-Prot
Match: PSDE_MOUSE (26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus GN=Psmd14 PE=1 SV=2)

HSP 1 Score: 493.4 bits (1269), Expect = 1.9e-138
Identity = 246/309 (79.61%), Postives = 270/309 (87.38%), Query Frame = 1


Query: 16  MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 75
           M+RL R+  G  G    PP D+P +D++EQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
Sbjct: 1   MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 60

Query: 76  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 135
           FVD+YTVRV+DVFAMPQSGTGVSVEAVD VFQ  MLDMLKQTGRPEMVVGWYHSHPGFGC
Sbjct: 61  FVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGC 120

Query: 136 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 195
           WLSGVDINTQQSFEAL++RAVAVVVDPIQSVKGKVVIDAFRLIN   M+LG EPRQTTSN
Sbjct: 121 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSN 180

Query: 196 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 255
           LGHLNKPSIQALIHGLNRHYYSI INYRKNELE+KMLLNLHKK W +GLTL+ +  H K 
Sbjct: 181 LGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKH 240

Query: 256 NEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 315
           NE  V+EML LA  YNKAV+EED++ PE+LAI NVG+QD K+HLEEHV  LM+SNI+Q L
Sbjct: 241 NESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCL 300

Query: 316 GTMLDTVVF 325
             MLDTVVF
Sbjct: 301 AAMLDTVVF 309

[Close]

BLAST of Lsi06G005900 vs. Swiss-Prot
Match: PSDE_HUMAN (26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens GN=PSMD14 PE=1 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 1.9e-138
Identity = 246/309 (79.61%), Postives = 270/309 (87.38%), Query Frame = 1


Query: 16  MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 75
           M+RL R+  G  G    PP D+P +D++EQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
Sbjct: 1   MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 60

Query: 76  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 135
           FVD+YTVRV+DVFAMPQSGTGVSVEAVD VFQ  MLDMLKQTGRPEMVVGWYHSHPGFGC
Sbjct: 61  FVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGC 120

Query: 136 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 195
           WLSGVDINTQQSFEAL++RAVAVVVDPIQSVKGKVVIDAFRLIN   M+LG EPRQTTSN
Sbjct: 121 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSN 180

Query: 196 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 255
           LGHLNKPSIQALIHGLNRHYYSI INYRKNELE+KMLLNLHKK W +GLTL+ +  H K 
Sbjct: 181 LGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKH 240

Query: 256 NEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 315
           NE  V+EML LA  YNKAV+EED++ PE+LAI NVG+QD K+HLEEHV  LM+SNI+Q L
Sbjct: 241 NESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCL 300

Query: 316 GTMLDTVVF 325
             MLDTVVF
Sbjct: 301 AAMLDTVVF 309

[Close]

BLAST of Lsi06G005900 vs. Swiss-Prot
Match: PSDE_DROME (26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila melanogaster GN=Rpn11 PE=1 SV=1)

HSP 1 Score: 480.7 bits (1236), Expect = 1.2e-134
Identity = 236/309 (76.38%), Postives = 270/309 (87.38%), Query Frame = 1


Query: 16  MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 75
           M+RL R+  G       PP D+P +D++EQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
Sbjct: 1   MDRLLRL--GGAMPQAAPPTDAPVVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 60

Query: 76  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 135
           FVD+YTV+V+DVFAMPQ+GTGVSVEAVD VFQ  MLDMLKQTGRPEMVVGWYHSHPGFGC
Sbjct: 61  FVDDYTVQVIDVFAMPQTGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGC 120

Query: 136 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 195
           WLSGVDINTQQSFEAL++RAVAVVVDPIQSVKGKVVIDAFRLINP  ++LGQEPRQTTSN
Sbjct: 121 WLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINPNMLVLGQEPRQTTSN 180

Query: 196 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 255
           LGHL KPS+QALIHGLNRHYYSI+INYRKNELE+KMLLNLHKK W DGLTL  ++ H   
Sbjct: 181 LGHLQKPSVQALIHGLNRHYYSISINYRKNELEQKMLLNLHKKSWKDGLTLSDYNEHCSI 240

Query: 256 NEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 315
           NE TV EML+LA  YNK++++E+++ PE+LAI NVG+QD K+HLEE V  +M +NI+Q L
Sbjct: 241 NEDTVAEMLDLAKNYNKSLEDEEKMTPEQLAIKNVGKQDPKRHLEEKVDKVMQNNIVQCL 300

Query: 316 GTMLDTVVF 325
           G MLDT+VF
Sbjct: 301 GAMLDTIVF 307

[Close]

BLAST of Lsi06G005900 vs. Swiss-Prot
Match: RPN11_SCHPO (26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpn11 PE=1 SV=2)

HSP 1 Score: 426.8 bits (1096), Expect = 2.1e-118
Identity = 217/309 (70.23%), Postives = 247/309 (79.94%), Query Frame = 1


Query: 16  MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 75
           ME LQR+  GA    G    D P +D+SE VYISSLALLKML+HGR G PMEVMGLMLGE
Sbjct: 1   MESLQRLLQGARMGTGMMG-DQPLVDNSECVYISSLALLKMLRHGRHGTPMEVMGLMLGE 60

Query: 76  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 135
           FVD++TVRVVDVFAMPQSGTGVSVEAVD VFQ NM+DMLKQTGRPEMVVGWYHSHPGFGC
Sbjct: 61  FVDDFTVRVVDVFAMPQSGTGVSVEAVDPVFQKNMMDMLKQTGRPEMVVGWYHSHPGFGC 120

Query: 136 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 195
           WLS VDINTQQSFE L  RAVAVVVDPIQSVKGKVVIDAFRLINP T+M+GQEPRQTTSN
Sbjct: 121 WLSSVDINTQQSFEQLTPRAVAVVVDPIQSVKGKVVIDAFRLINPSTLMMGQEPRQTTSN 180

Query: 196 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 255
           LGH+NKPSIQALIHGL RHYYS+ INY+K ELEE MLLNLHK+ W  GL L  F++ ++ 
Sbjct: 181 LGHINKPSIQALIHGLGRHYYSLRINYKKTELEEIMLLNLHKQPWAHGLLLENFNSAAEK 240

Query: 256 NEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 315
           N  ++ +M +L+ +Y + VQ E  L PE+L I  VG+QD KKHL+  V   + +NI   L
Sbjct: 241 NHASIDKMKSLSEQYTERVQNEVTLSPEQLRIQYVGKQDPKKHLDAEVQKCIDNNISSML 300

Query: 316 GTMLDTVVF 325
             MLD+V F
Sbjct: 301 ACMLDSVAF 308

[Close]

BLAST of Lsi06G005900 vs. TrEMBL
Match: A0A0A0L4U0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G639140 PE=4 SV=1)

HSP 1 Score: 615.9 bits (1587), Expect = 2.8e-173
Identity = 308/309 (99.68%), Postives = 309/309 (100.00%), Query Frame = 1


Query: 16  MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 75
           MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
Sbjct: 1   MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 60

Query: 76  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 135
           FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC
Sbjct: 61  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 120

Query: 136 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 195
           WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN
Sbjct: 121 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 180

Query: 196 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 255
           LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT
Sbjct: 181 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 240

Query: 256 NEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 315
           NEQTVQEMLNLA+KYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL
Sbjct: 241 NEQTVQEMLNLAIKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 300

Query: 316 GTMLDTVVF 325
           GTMLDTVVF
Sbjct: 301 GTMLDTVVF 309

[Close]

BLAST of Lsi06G005900 vs. TrEMBL
Match: A0A059BLA1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F00252 PE=4 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 8.0e-173
Identity = 306/309 (99.03%), Postives = 309/309 (100.00%), Query Frame = 1


Query: 16  MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 75
           MERLQRMFAGAGG+LGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
Sbjct: 4   MERLQRMFAGAGGALGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 63

Query: 76  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 135
           FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC
Sbjct: 64  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 123

Query: 136 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 195
           WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN
Sbjct: 124 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 183

Query: 196 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 255
           LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT
Sbjct: 184 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 243

Query: 256 NEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 315
           NEQTVQEMLNLA+KYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNI+QTL
Sbjct: 244 NEQTVQEMLNLAIKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTL 303

Query: 316 GTMLDTVVF 325
           GTMLDTVVF
Sbjct: 304 GTMLDTVVF 312

[Close]

BLAST of Lsi06G005900 vs. TrEMBL
Match: A0A061FBV8_THECC (Mov34/MPN/PAD-1 family protein OS=Theobroma cacao GN=TCM_033881 PE=4 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 8.0e-173
Identity = 306/309 (99.03%), Postives = 309/309 (100.00%), Query Frame = 1


Query: 16  MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 75
           MERLQRMFAGAGG+LGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
Sbjct: 39  MERLQRMFAGAGGALGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 98

Query: 76  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 135
           FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC
Sbjct: 99  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 158

Query: 136 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 195
           WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN
Sbjct: 159 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 218

Query: 196 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 255
           LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT
Sbjct: 219 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 278

Query: 256 NEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 315
           NEQTVQEMLNLA+KYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNI+QTL
Sbjct: 279 NEQTVQEMLNLAIKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTL 338

Query: 316 GTMLDTVVF 325
           GTMLDTVVF
Sbjct: 339 GTMLDTVVF 347

[Close]

BLAST of Lsi06G005900 vs. TrEMBL
Match: A0A059B9C3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00170 PE=4 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 1.8e-172
Identity = 308/321 (95.95%), Postives = 313/321 (97.51%), Query Frame = 1


Query: 4   SRKDRRRGKTLQMERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAG 63
           S ++ R   +  MERLQRMFAGAGG LGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAG
Sbjct: 21  SNRESRSWMSGGMERLQRMFAGAGGGLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAG 80

Query: 64  VPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMV 123
           VPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMV
Sbjct: 81  VPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMV 140

Query: 124 VGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTM 183
           VGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTM
Sbjct: 141 VGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTM 200

Query: 184 MLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDG 243
           MLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDG
Sbjct: 201 MLGQEPRQTTSNLGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDG 260

Query: 244 LTLRRFDTHSKTNEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHV 303
           LTLRRFDTHSKTNEQTVQEMLNLA+KYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHV
Sbjct: 261 LTLRRFDTHSKTNEQTVQEMLNLAIKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHV 320

Query: 304 SNLMSSNIIQTLGTMLDTVVF 325
           SNLMSSNI+QTLGTMLDTVVF
Sbjct: 321 SNLMSSNIVQTLGTMLDTVVF 341

[Close]

BLAST of Lsi06G005900 vs. TrEMBL
Match: A9PHG3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s12940g PE=2 SV=1)

HSP 1 Score: 612.5 bits (1578), Expect = 3.1e-172
Identity = 305/309 (98.71%), Postives = 309/309 (100.00%), Query Frame = 1


Query: 16  MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 75
           MERLQRMFAGAGG+LGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
Sbjct: 4   MERLQRMFAGAGGALGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 63

Query: 76  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 135
           FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC
Sbjct: 64  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 123

Query: 136 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 195
           WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN
Sbjct: 124 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 183

Query: 196 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 255
           LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT
Sbjct: 184 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 243

Query: 256 NEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 315
           NEQTVQEML+LA+KYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNI+QTL
Sbjct: 244 NEQTVQEMLSLAIKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTL 303

Query: 316 GTMLDTVVF 325
           GTMLDTVVF
Sbjct: 304 GTMLDTVVF 312

[Close]

BLAST of Lsi06G005900 vs. TAIR10
Match: AT5G23540.1 (AT5G23540.1 Mov34/MPN/PAD-1 family protein)

HSP 1 Score: 587.0 bits (1512), Expect = 7.0e-168
Identity = 296/309 (95.79%), Postives = 301/309 (97.41%), Query Frame = 1


Query: 16  MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 75
           MERLQR+F GAGG LGH  PDSPTLD+SEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
Sbjct: 1   MERLQRIF-GAGGGLGHASPDSPTLDTSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 60

Query: 76  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 135
           FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC
Sbjct: 61  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 120

Query: 136 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 195
           WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFR INPQT+MLGQEPRQTTSN
Sbjct: 121 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIMLGQEPRQTTSN 180

Query: 196 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 255
           LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT
Sbjct: 181 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 240

Query: 256 NEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 315
           NEQTVQEML+LA KYNKAVQEEDEL PEKLAI NVGRQDAKKHLEEHVSNLMSSNI+QTL
Sbjct: 241 NEQTVQEMLSLAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKHLEEHVSNLMSSNIVQTL 300

Query: 316 GTMLDTVVF 325
           GTMLDTVVF
Sbjct: 301 GTMLDTVVF 308

[Close]

BLAST of Lsi06G005900 vs. TAIR10
Match: AT1G71230.1 (AT1G71230.1 COP9-signalosome 5B)

HSP 1 Score: 131.7 bits (330), Expect = 8.0e-31
Identity = 83/207 (40.10%), Postives = 120/207 (57.97%), Query Frame = 1


Query: 44  EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVD 103
           ++V IS+LALLKM+ H R+G  +E+MGLM G+  D  T+ V+D FA+P  GT   V A D
Sbjct: 57  KRVKISALALLKMVVHARSGGTIEIMGLMQGK-TDGDTIIVMDAFALPVEGTETRVNAQD 116

Query: 104 HVFQ--TNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVD 163
             ++         K  GR E VVGWYHSHPG+GCWLSG+D++TQ+  +   +  +AVV+D
Sbjct: 117 DAYEYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVID 176

Query: 164 PIQSVK-GKVVIDAFRLINPQTMMLG-QEPRQTTSNLGHLNKPSIQAL-IHGLNRHYYSI 223
           P ++V  GKV I AFR     T   G + P +  S    +    I+   +H   + YYS+
Sbjct: 177 PTRTVSAGKVEIGAFR-----TYSKGYKPPDEPVSEYQTIPLNKIEDFGVH--CKQYYSL 236

Query: 224 AINYRKNELEEKMLLNLHKKKWTDGLT 246
            + Y K+ L+  +L  L  K W + L+
Sbjct: 237 DVTYFKSSLDSHLLDLLWNKYWVNTLS 255

[Close]

BLAST of Lsi06G005900 vs. TAIR10
Match: AT1G22920.1 (AT1G22920.1 COP9 signalosome 5A)

HSP 1 Score: 129.8 bits (325), Expect = 3.0e-30
Identity = 79/207 (38.16%), Postives = 116/207 (56.04%), Query Frame = 1


Query: 44  EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVD 103
           ++V+IS+LALLKM+ H R+G  +E+MGLM G+   + T+ V+D FA+P  GT   V A  
Sbjct: 57  KRVHISALALLKMVVHARSGGTIEIMGLMQGKTEGD-TIIVMDAFALPVEGTETRVNAQS 116

Query: 104 HVFQ--TNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVD 163
             ++         K  GR E VVGWYHSHPG+GCWLSG+D++TQ   +   +  +AVV+D
Sbjct: 117 DAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVID 176

Query: 164 PIQSVK-GKVVIDAFRLINPQTMMLGQE--PRQTTSNLGHLNKPSIQALIHGLNRHYYSI 223
           P ++V  GKV I AFR   P+   +  +      T  L  +    +        + YYS+
Sbjct: 177 PTRTVSAGKVEIGAFRTY-PEGHKISDDHVSEYQTIPLNKIEDFGVHC------KQYYSL 236

Query: 224 AINYRKNELEEKMLLNLHKKKWTDGLT 246
            I Y K+ L+  +L  L  K W + L+
Sbjct: 237 DITYFKSSLDSHLLDLLWNKYWVNTLS 255

[Close]

BLAST of Lsi06G005900 vs. NCBI nr
Match: gi|659103213|ref|XP_008452528.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 14 homolog [Cucumis melo])

HSP 1 Score: 615.9 bits (1587), Expect = 4.0e-173
Identity = 308/309 (99.68%), Postives = 309/309 (100.00%), Query Frame = 1


Query: 16  MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 75
           MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
Sbjct: 1   MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 60

Query: 76  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 135
           FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC
Sbjct: 61  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 120

Query: 136 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 195
           WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN
Sbjct: 121 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 180

Query: 196 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 255
           LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT
Sbjct: 181 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 240

Query: 256 NEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 315
           NEQTVQEMLNLA+KYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL
Sbjct: 241 NEQTVQEMLNLAIKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 300

Query: 316 GTMLDTVVF 325
           GTMLDTVVF
Sbjct: 301 GTMLDTVVF 309

[Close]

BLAST of Lsi06G005900 vs. NCBI nr
Match: gi|1009136241|ref|XP_015885428.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 14 homolog [Ziziphus jujuba])

HSP 1 Score: 614.8 bits (1584), Expect = 8.8e-173
Identity = 307/309 (99.35%), Postives = 309/309 (100.00%), Query Frame = 1


Query: 16  MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 75
           MERLQRMFAGAGG+LGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
Sbjct: 4   MERLQRMFAGAGGALGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 63

Query: 76  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 135
           FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC
Sbjct: 64  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 123

Query: 136 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 195
           WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN
Sbjct: 124 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 183

Query: 196 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 255
           LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT
Sbjct: 184 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 243

Query: 256 NEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 315
           NEQTVQEMLNLA+KYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL
Sbjct: 244 NEQTVQEMLNLAIKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 303

Query: 316 GTMLDTVVF 325
           GTMLDTVVF
Sbjct: 304 GTMLDTVVF 312

[Close]

BLAST of Lsi06G005900 vs. NCBI nr
Match: gi|702361511|ref|XP_010059964.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 14 homolog [Eucalyptus grandis])

HSP 1 Score: 614.4 bits (1583), Expect = 1.2e-172
Identity = 306/309 (99.03%), Postives = 309/309 (100.00%), Query Frame = 1


Query: 16  MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 75
           MERLQRMFAGAGG+LGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
Sbjct: 4   MERLQRMFAGAGGALGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 63

Query: 76  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 135
           FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC
Sbjct: 64  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 123

Query: 136 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 195
           WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN
Sbjct: 124 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 183

Query: 196 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 255
           LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT
Sbjct: 184 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 243

Query: 256 NEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 315
           NEQTVQEMLNLA+KYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNI+QTL
Sbjct: 244 NEQTVQEMLNLAIKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTL 303

Query: 316 GTMLDTVVF 325
           GTMLDTVVF
Sbjct: 304 GTMLDTVVF 312

[Close]

BLAST of Lsi06G005900 vs. NCBI nr
Match: gi|659103209|ref|XP_008452526.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 14 homolog [Cucumis melo])

HSP 1 Score: 614.4 bits (1583), Expect = 1.2e-172
Identity = 307/309 (99.35%), Postives = 308/309 (99.68%), Query Frame = 1


Query: 16  MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 75
           MERLQRMFAG GGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
Sbjct: 1   MERLQRMFAGTGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 60

Query: 76  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 135
           FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC
Sbjct: 61  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 120

Query: 136 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 195
           WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN
Sbjct: 121 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 180

Query: 196 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 255
           LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT
Sbjct: 181 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 240

Query: 256 NEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 315
           NEQTVQEMLNLA+KYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL
Sbjct: 241 NEQTVQEMLNLAIKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 300

Query: 316 GTMLDTVVF 325
           GTMLDTVVF
Sbjct: 301 GTMLDTVVF 309

[Close]

BLAST of Lsi06G005900 vs. NCBI nr
Match: gi|590592512|ref|XP_007017301.1| (Mov34/MPN/PAD-1 family protein [Theobroma cacao])

HSP 1 Score: 614.4 bits (1583), Expect = 1.2e-172
Identity = 306/309 (99.03%), Postives = 309/309 (100.00%), Query Frame = 1


Query: 16  MERLQRMFAGAGGSLGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 75
           MERLQRMFAGAGG+LGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE
Sbjct: 39  MERLQRMFAGAGGALGHPPPDSPTLDSSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGE 98

Query: 76  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 135
           FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC
Sbjct: 99  FVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGC 158

Query: 136 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 195
           WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN
Sbjct: 159 WLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRLINPQTMMLGQEPRQTTSN 218

Query: 196 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 255
           LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT
Sbjct: 219 LGHLNKPSIQALIHGLNRHYYSIAINYRKNELEEKMLLNLHKKKWTDGLTLRRFDTHSKT 278

Query: 256 NEQTVQEMLNLAVKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIIQTL 315
           NEQTVQEMLNLA+KYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNI+QTL
Sbjct: 279 NEQTVQEMLNLAIKYNKAVQEEDELPPEKLAIANVGRQDAKKHLEEHVSNLMSSNIVQTL 338

Query: 316 GTMLDTVVF 325
           GTMLDTVVF
Sbjct: 339 GTMLDTVVF 347

The following BLAST results are available for this feature:

BLAST of Lsi06G005900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PSDE_ARATH	1.2e-166	95.79	26S proteasome non-ATPase regulatory subunit 14 homolog OS=Arabidopsis thaliana ...	[more]
PSDE_MOUSE	1.9e-138	79.61	26S proteasome non-ATPase regulatory subunit 14 OS=Mus musculus GN=Psmd14 PE=1 S...	[more]
PSDE_HUMAN	1.9e-138	79.61	26S proteasome non-ATPase regulatory subunit 14 OS=Homo sapiens GN=PSMD14 PE=1 S...	[more]
PSDE_DROME	1.2e-134	76.38	26S proteasome non-ATPase regulatory subunit 14 OS=Drosophila melanogaster GN=Rp...	[more]
RPN11_SCHPO	2.1e-118	70.23	26S proteasome regulatory subunit rpn11 OS=Schizosaccharomyces pombe (strain 972...	[more]

BLAST of Lsi06G005900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4U0_CUCSA	2.8e-173	99.68	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G639140 PE=4 SV=1	[more]
A0A059BLA1_EUCGR	8.0e-173	99.03	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F00252 PE=4 SV=1	[more]
A0A061FBV8_THECC	8.0e-173	99.03	Mov34/MPN/PAD-1 family protein OS=Theobroma cacao GN=TCM_033881 PE=4 SV=1	[more]
A0A059B9C3_EUCGR	1.8e-172	95.95	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00170 PE=4 SV=1	[more]
A9PHG3_POPTR	3.1e-172	98.71	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s12940g PE=2 SV=1	[more]

BLAST of Lsi06G005900 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G23540.1	7.0e-168	95.79	Mov34/MPN/PAD-1 family protein	[more]
AT1G71230.1	8.0e-31	40.10	COP9-signalosome 5B	[more]
AT1G22920.1	3.0e-30	38.16	COP9 signalosome 5A	[more]

BLAST of Lsi06G005900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659103213\|ref\|XP_008452528.1\|	4.0e-173	99.68	PREDICTED: 26S proteasome non-ATPase regulatory subunit 14 homolog [Cucumis melo...	[more]
gi\|1009136241\|ref\|XP_015885428.1\|	8.8e-173	99.35	PREDICTED: 26S proteasome non-ATPase regulatory subunit 14 homolog [Ziziphus juj...	[more]
gi\|702361511\|ref\|XP_010059964.1\|	1.2e-172	99.03	PREDICTED: 26S proteasome non-ATPase regulatory subunit 14 homolog [Eucalyptus g...	[more]
gi\|659103209\|ref\|XP_008452526.1\|	1.2e-172	99.35	PREDICTED: 26S proteasome non-ATPase regulatory subunit 14 homolog [Cucumis melo...	[more]
gi\|590592512\|ref\|XP_007017301.1\|	1.2e-172	99.03	Mov34/MPN/PAD-1 family protein [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR024969	Rpn11/EIF3F_C
IPR000555	JAMM/MPN+_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0000502	proteasome complex
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G005900.1	Lsi06G005900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	PFAM	PF01398	JAB	coord: 42..153 score: 2.3
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	SMART	SM00232	pad1_6	coord: 45..180 score: 1.1
IPR024969	Rpn11/EIF3F, C-terminal	PFAM	PF13012	MitMem_reg	coord: 188..305 score: 2.8
None	No IPR available	GENE3D	G3DSA:3.40.140.10		coord: 45..179 score: 1.9
None	No IPR available	PANTHER	PTHR10410	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED	coord: 1..324 score: 3.3E
None	No IPR available	PANTHER	PTHR10410:SF5	26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 14	coord: 1..324 score: 3.3E
None	No IPR available	unknown	SSF102712	JAB1/MPN domain	coord: 46..183 score: 1.96

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G005900	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G005900	Cucumber (Chinese Long) v2	culsiB058
Lsi06G005900	Melon (DHL92) v3.5.1	lsimeB396
Lsi06G005900	Watermelon (Charleston Gray)	lsiwcgB364
Lsi06G005900	Watermelon (97103) v1	lsiwmB397
Lsi06G005900	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G005900	Melon (DHL92) v3.6.1	lsimedB418
Lsi06G005900	Silver-seed gourd	carlsiB807
Lsi06G005900	Silver-seed gourd	carlsiB886
Lsi06G005900	Cucumber (Chinese Long) v3	cuclsiB068
Lsi06G005900	Watermelon (97103) v2	lsiwmbB365
Lsi06G005900	Wax gourd	lsiwgoB520
Lsi06G005900	Cucumber (Gy14) v1	cgylsiB573
Lsi06G005900	Cucurbita maxima (Rimu)	cmalsiB073
Lsi06G005900	Cucurbita maxima (Rimu)	cmalsiB128
Lsi06G005900	Cucurbita moschata (Rifu)	cmolsiB059
Lsi06G005900	Cucurbita moschata (Rifu)	cmolsiB118
Lsi06G005900	Cucurbita pepo (Zucchini)	cpelsiB299
Lsi06G005900	Cucurbita pepo (Zucchini)	cpelsiB563