Lsi06G005690 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G005690
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionFission 1 protein
Locationchr06 : 7412806 .. 7417010 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAAATTGAATCAGTGTTTTCAAATTTCCTACCAAACACGCGCTAAATATTTATCTAAAAAATATCAGGGTAAAACGTGTGAAACAAAACGTTAGTGTAAGTCTTTAGCTAGTGGTTTCCGTAAAAGCGGAAAAATAAAAAAGAAACAAAACAGGGTTCCGCGTTACTTGAAATAGCGACAACGCAGAAGAAGATTAGCAGAGAAAAATGGAAGCAAAAGTGAGCAAATTCTTCGGTTCGGTTTCCAATTTCTTCTCCGGCGGCGATCACATACCATGGTGCGATCGCGATGTCATTGCCGTATGTTTATTCTCTCTCTCTCCTCTTCTTTTAGTTGCTTGATTTCTTCTGTTGTCTAGATTCCGGTTTGTTTTCGAAATCAGGTTGTTGGGTCTCTAATGAGCTATGTTTTTTAGTGTATTTGATTGAATTTTGGGTGTTTGTGTGAATCCTTTGCGTTTGTATTGTAAAACAGTGTTCTAATTCTTATTGTAATTACTGTTAATTCTTCCAGTTAATTGATTTTGGGTGTTTGTATGGAGTGATTTAATTGCATTTTGTGGCTGTGCGGACTTTAAACTTGAAATTTCCCCCTTTCAACTTGTTCATCTTTGTCCTGATATTTCCAATTTTAACGAAACTCATGGCCTTCTTGTTTTAGGGCATGTGTTTTTTTATTATTTATTTTTTCTTAAGTCGCAAGATTGAACATCATTAACTAAATTTTAATGAATGTTTCCCCCATGTCTCTTGTCGGTATTACTGAAATTATTGCTTTGACTAATCTTTGCCTTCATTTAAATCACGGGCCAGGCCATTGTCATGGAATTTCAGCACGTCATGCTTAATGGGAACCATTAGTTTTACTTGGTTCTTTAGCTGATGGCCTGTTTGTGAGACTTTAATCATTTTCAAAATCACTCAAGAATTTCTTTTAAATTCAAAATCAATTTTAATAGGATGAAAAATGTGTTTAAAAGTGTAAAATTAAATATTAAATTGATTTTGAGGGATTAAAAGTGTGTTTCAAAGTGATTTTAAATACGATAAATGTGGTTTTAACCATTTTAAAGTCATTGGCTAACATTCACTAAGACTATTGAATACCTATTTTGTTTTGCCCATCAGGAGGGAGTTGAGGCTAGATTTTCTATCCCTGCATTTTCTTGCTTCTTGATAGCTATCTCCATGTCCTTTTTTTTCTCTCTTTCTGTATCAGGCTACTAGAAGGCAGATGCAAGCACAACAGTTGATGCACATGCACCAATAAATAGTGTCTACTGAAATTTGTTATATTATGCTTAATCTAACTCAAATATCCATACTCATTAAAAGAAAAAGAAATATATGTGTGTGTGTATATATATATATATATGTCTATCCTGAAAATTCTATGTCTGTTTGTAAATCAGATTAAAGGATTGTTTTGGGTTTTAGAATTAAAAAAGAGCTTTTTATGACAAATACTTATTTGTGGCAGAAAACTGAAAGTTGTTTGTTTTCACATTGTTTTATGTTGTTTCGATTAGTTATTGTATATTTATTAAGTATAGCTTGTTTTGAATGTGTTATATATCAATTTTAATAGGTTAAAGAAGTAAATGAATATACAATAAAAGAAAATATCTTTCCAAACAGTTTGCCATCGGTCCATCGCTGTTATAAAATCATTGGAGCCATAGATCCTTGTTTTTCTCCATGGCTCAGTCATACCTTTCCCTACATTGTCTAGTTACAAAGTAGAAGTTCAAACTTCTTGTTGCGACTGCATAATATTGTTAGTCTTTATTTTAATAATGTCATCTCTCATAATCTCATATTATTCTTTGAATGGCACCCATTTTTAAGTTGATATGGTGATGCATTGCAGGGTTGTGAAAGAGAGGCTGCTGATGCCGAAAAGGGCTCATCTGATGAGCTGTTGAAGGAAAGCATTCTGCGTTTATCTTGGGCACTTGTTCATTCAAAGCAGCCCGAAGATGTACAACGTGGGATCGCAATGCTTGAAGGTGAAGTATTTCAAGGAATTAGACATCCTTTTTTTATTATTATTATTTTCTTATAACTTTGAGTTTCCAAAATGCTTTCAAAGTGCCAGTGTGAACCTATAGTTAGCTATTTGCTTGTCTGATACTCTTCAACGTTTTTTCTCCCTTTTCTGTCATTTTGTTATTATGCAGCTGCACTATCTGGTGATGATAACCCATTGAAGATGAGAGAGAAGCTTTATCTTCTTGCCGTTGGGTATTTCAGAAGTGGTGATTATTCTAGGAGTCGGGAACTTGTAGAACAATGCTTAACGGTATGATTCTATCTGTGGCTTGGATTTCTATGTATAGTGAATAACCATTAACTTGGGCCGCGATTAGTAACAGTTAGGCTCCATTTAGTAACCAATTTTTTTTTTGTTTTTTTTTTTGAAAATTAAGCCTATTTTCTCTCAATTTCTTGCAATGATGATTTGCATCTTTCTTAAGTAAAATAGTTGAATTCTTAGCAAAATTCCAAAAACAAAAACAAGTTTTTAAAAACTACTTTTTTTAGTTTTCAAAATTTGGCTTGGTTTTTTAAAACATTGGTAAAAAGTAGATAACAGAGTAAGAAATTTAGTGGTGGAAGGAGTGCTGCTTAATTTTTAAAAACCAAAAACCAAATGGTTACCAAACGGGGCCTTAGGTTTTGGGTTTTTAGTTTTTTAGTTATTGAAAATTAAGCCTATAAACACCCGTTCGATATTTCTTGCTTTATTATCTATTTTCTACCAATGTTTTCAAAAACAAAGCCAAGTTTTGAAAACTAAAAGAATAGTTTCTAAAAACTTGTTTTTGTTTTTGGAATTTAGCTAAGAATTCAACTCTTCTACTCAAGAAAGATGAGAACCATTTTAAGAAATTGAGAGGAAGTAGACTTAATTTTCAATAAGCAAATGGTTACCAAATGGGAACTTAATGTCTTGAGTTTTTTTTCTCGTGCATCTCAAGCTTGATACTTGATGCTACAATGCAGGAAGACATAATTTGGCCTTGTGTTAGGATACTTCCTAACTAGAATAAGATCTGAATATATTGAAATGTAAAGATGAAGAAATACAAGATAAACCAAGTTCAAGGTACTTGGAAACCGCCCTCTTGGGCATTCTAACTCAAGCCTTAACCACTCAACTAATGCCTACCTTCACTCACTCATCCTCTCTCTATTTATAACAAGAATCAGTAACTAACTTCCTATCTAATTACCCTTATACTCCTTACTAATACCATACCAATATACTTATCTAGGTACCTAACACCTTGATACATATCTGACCCCCTAATATGTGCCACTTCTTTTTCGTAAACTTTCGATGTGGTTGACATGTGTTAATATATGATTGTGACATGTGGGGGAACACATCTAGATTGTTTTATGAATTTAATAACCAAAATGAGAGATACATACAACATTCCATAAAATTGGAACTCTCAGAAACAGAATGTGGCACTTCTTTATGAAACCACTGATGATTGAATTTTAGAACTTTGGAGCTCAACCATTTTGATGTTTGATTCTCAGATTGCTCCCGACTGGAGACAGGCAATGACACTGAAGAAATCAATCGAAGACCGGATCACTAAAGGTATCGATTTCTCCCATACTTTTTTTTTTTTTTTTCTTTTTTGACAATGTGTGGGGTGGAAGAATCAAATCTTTGACTTTGAAGTTGATAGTACAAGCATTATGCCAATTGAGCTAATGACATTTCTCCCAGACTTCTAATCTTTCCTTATCCCAATTTAACCAAAAATTCATTGAAAATGATCAATTTAATTCATTATCACTCTTGCTTGGGGAATGTAGATGGTGTGATTGGCATCGGCATAGCAGCGACGGCAGCGACTGCTGTAGGACTGCTTGCTGGTGGTATTGCTGCTGCTGTTTCCAGGAAGAAGTGAGTTAATTACTTGCTTTGTATATAAGAGATGGTCTGATCAAATCCTGTTTTAGAGTTGCTATACTTAAAAAGCTTAATATGTACAATGCGATTTAGCTATTAACAATGTTTGTTCTGTTATATTGATCTATTTTACATTGTAAAAATACGATGTTATGTACTTTGTCCTGCATTGGTAGTTTATTTGAGATTGTCCAAATTCTTTCTAATTGATTTTGGGGAGTTGAGCAAAAGCATTACGAAAACTTTGGGGAAAAATTATTCAAAATGACC

mRNA sequence

AGAAAATTGAATCAGTGTTTTCAAATTTCCTACCAAACACGCGCTAAATATTTATCTAAAAAATATCAGGGTAAAACGTGTGAAACAAAACGTTAGTGTAAGTCTTTAGCTAGTGGTTTCCGTAAAAGCGGAAAAATAAAAAAGAAACAAAACAGGGTTCCGCGTTACTTGAAATAGCGACAACGCAGAAGAAGATTAGCAGAGAAAAATGGAAGCAAAAGTGAGCAAATTCTTCGGTTCGGTTTCCAATTTCTTCTCCGGCGGCGATCACATACCATGGTGCGATCGCGATGTCATTGCCGGTTGTGAAAGAGAGGCTGCTGATGCCGAAAAGGGCTCATCTGATGAGCTGTTGAAGGAAAGCATTCTGCGTTTATCTTGGGCACTTGTTCATTCAAAGCAGCCCGAAGATGTACAACGTGGGATCGCAATGCTTGAAGCTGCACTATCTGGTGATGATAACCCATTGAAGATGAGAGAGAAGCTTTATCTTCTTGCCGTTGGGTATTTCAGAAGTGGTGATTATTCTAGGAATGGTGTGATTGGCATCGGCATAGCAGCGACGGCAGCGACTGCTGTAGGACTGCTTGCTGGTGGTATTGCTGCTGCTGTTTCCAGGAAGAAGTGAGTTAATTACTTGCTTTGTATATAAGAGATGGTCTGATCAAATCCTGTTTTAGAGTTGCTATACTTAAAAAGCTTAATATGTACAATGCGATTTAGCTATTAACAATGTTTGTTCTGTTATATTGATCTATTTTACATTGTAAAAATACGATGTTATGTACTTTGTCCTGCATTGGTAGTTTATTTGAGATTGTCCAAATTCTTTCTAATTGATTTTGGGGAGTTGAGCAAAAGCATTACGAAAACTTTGGGGAAAAATTATTCAAAATGACC

Coding sequence (CDS)

ATGGAAGCAAAAGTGAGCAAATTCTTCGGTTCGGTTTCCAATTTCTTCTCCGGCGGCGATCACATACCATGGTGCGATCGCGATGTCATTGCCGGTTGTGAAAGAGAGGCTGCTGATGCCGAAAAGGGCTCATCTGATGAGCTGTTGAAGGAAAGCATTCTGCGTTTATCTTGGGCACTTGTTCATTCAAAGCAGCCCGAAGATGTACAACGTGGGATCGCAATGCTTGAAGCTGCACTATCTGGTGATGATAACCCATTGAAGATGAGAGAGAAGCTTTATCTTCTTGCCGTTGGGTATTTCAGAAGTGGTGATTATTCTAGGAATGGTGTGATTGGCATCGGCATAGCAGCGACGGCAGCGACTGCTGTAGGACTGCTTGCTGGTGGTATTGCTGCTGCTGTTTCCAGGAAGAAGTGA

Protein sequence

MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSRNGVIGIGIAATAATAVGLLAGGIAAAVSRKK
Homology
[Close]
BLAST of Lsi06G005690 vs. Swiss-Prot
Match: FIS1A_ARATH (Mitochondrial fission 1 protein A OS=Arabidopsis thaliana GN=FIS1A PE=1 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 4.8e-43
Identity = 96/170 (56.47%), Postives = 113/170 (66.47%), Query Frame = 1 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           M+AK+ +FF SV  FFSG D IPWCD DVIAGCERE  +A    +++L KE ++RLSWAL
Sbjct: 1   MDAKIGQFFDSVGTFFSGSDKIPWCDGDVIAGCEREVREATDSGTEDLKKECLMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+Q EDVQRGIAMLEA+L     PL+ REKLYLLAVGY+RSG+YSR            
Sbjct: 61  VHSRQTEDVQRGIAMLEASLESSAPPLEDREKLYLLAVGYYRSGNYSRSRQLVDRCIEMQ 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI ATA  AVGL+AGGI AA+SRKK
Sbjct: 121 ADWRQALVLKKTIEDKITKDGVIGIGITATAFGAVGLIAGGIVAAMSRKK 170

[Close]
BLAST of Lsi06G005690 vs. Swiss-Prot
Match: FIS1B_ARATH (Mitochondrial fission 1 protein B OS=Arabidopsis thaliana GN=FIS1B PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.2e-31
Identity = 83/173 (47.98%), Postives = 106/173 (61.27%), Query Frame = 1 

Query: 1   MEAKVSKFFGSVSNFFSGG-----DHIPWCDRDVIAGCEREAADAEKGSSDELLKESILR 60
           M+A + K F SVS+FFSG      D  P CD D+I+GCE+E A+A+    +   KE I+R
Sbjct: 1   MDAAIGKVFDSVSDFFSGAASASADEFPLCDSDIISGCEKELAEAQ---DEGRKKECIMR 60

Query: 61  LSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------- 120
           LSWALVHSK P D+QRGIAMLEA +  D + +K+REKLYLLA+GY+RSGD+SR       
Sbjct: 61  LSWALVHSKMPSDIQRGIAMLEALVVNDTSAMKLREKLYLLALGYYRSGDFSRSRDCIER 120

Query: 121 ------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSR 138
                                   +GVIG+GI   A TAVG++A GIAAA+ R
Sbjct: 121 CLEVEPESGQAQALKKAIEDRIVKDGVIGVGI---AVTAVGVVA-GIAAAILR 166

[Close]
BLAST of Lsi06G005690 vs. TrEMBL
Match: A0A0A0M2W6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G627410 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 3.1e-57
Identity = 126/170 (74.12%), Postives = 133/170 (78.24%), Query Frame = 1 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           MEAKVSKF GSVSNFFSGGDHIPWCD DV+AGCEREAA+AEK SSDELLKESI+RLSWAL
Sbjct: 1   MEAKVSKFLGSVSNFFSGGDHIPWCDCDVVAGCEREAAEAEKSSSDELLKESIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+QPEDVQRGIAMLEAA+SGDD+PLKMREKLYLLAVGYFRSGDYSR            
Sbjct: 61  VHSRQPEDVQRGIAMLEAAISGDDSPLKMREKLYLLAVGYFRSGDYSRSRELVEECLTIA 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI   AATAVGLLAGGIAAAVSRKK
Sbjct: 121 PDWRQAMTLKKSIEDRITKDGVIGIGI---AATAVGLLAGGIAAAVSRKK 167

[Close]
BLAST of Lsi06G005690 vs. TrEMBL
Match: A0A059D8Y1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03723 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 5.3e-49
Identity = 107/170 (62.94%), Postives = 128/170 (75.29%), Query Frame = 1 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           MEAK+S+FFGSVS+FF+G DHIPWCDRDVIAGCERE A+AEK SSDEL+ E I+RLSWAL
Sbjct: 1   MEAKMSQFFGSVSDFFTGADHIPWCDRDVIAGCEREIAEAEKASSDELISECIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDY-------------- 120
           VHS+QPEDVQRGIAMLEA++SG  +PL++RE+LYLLAVGY+RSGDY              
Sbjct: 61  VHSRQPEDVQRGIAMLEASVSGTTSPLQLREQLYLLAVGYYRSGDYTKSRDLVERCLRIA 120

Query: 121 -----------------SRNGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                            +++G+IGIGI   A TAVGLLAGG+AAA+SRKK
Sbjct: 121 PDWRQALTLKKTIEDRITKDGIIGIGI---AVTAVGLLAGGLAAALSRKK 167

[Close]
BLAST of Lsi06G005690 vs. TrEMBL
Match: A0A0V0HDG0_SOLCH (Putative mitochondrial fission 1 protein A-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.1e-49
Identity = 104/170 (61.18%), Postives = 123/170 (72.35%), Query Frame = 1 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           M+AK+  FF SV NFF+GGD IPWCD D++ GCERE A+A KGSSDEL  E I+RLSWAL
Sbjct: 1   MDAKIGNFFESVGNFFTGGDQIPWCDSDIVTGCEREVAEAGKGSSDELKNECIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS++PEDVQRGIAMLEA+L G ++PL+MREK+YLLAVGY+RSGDY+R            
Sbjct: 61  VHSRRPEDVQRGIAMLEASLGGSNSPLQMREKIYLLAVGYYRSGDYARSRQLVERCLEIE 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGIAATA TAVGLLAGG+ AA+SRKK
Sbjct: 121 PEWRQALTLRKTIEDKITKDGVIGIGIAATAVTAVGLLAGGLVAALSRKK 170

[Close]
BLAST of Lsi06G005690 vs. TrEMBL
Match: M1D380_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400031242 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.0e-48
Identity = 103/170 (60.59%), Postives = 122/170 (71.76%), Query Frame = 1 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           M+AK+  FF SV NFF+GGD IPWCD D++ GCERE A+  KGSSDEL KE I+RLSWAL
Sbjct: 1   MDAKIGNFFESVGNFFTGGDQIPWCDSDIVTGCEREVAEVGKGSSDELKKECIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS++PEDVQRGIAMLEA+L G ++PL+MREK+YLLAVGY+RSGDY+R            
Sbjct: 61  VHSRRPEDVQRGIAMLEASLGGSNSPLQMREKIYLLAVGYYRSGDYARSRQLVERCLEIE 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI ATA TAVGLLAGG+ AA+SRKK
Sbjct: 121 PEWRQALTLRKTIEDKITKDGVIGIGITATAVTAVGLLAGGLVAALSRKK 170

[Close]
BLAST of Lsi06G005690 vs. TrEMBL
Match: K4D9C3_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 6.5e-47
Identity = 102/170 (60.00%), Postives = 120/170 (70.59%), Query Frame = 1 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           M+AK+  FF SV NFF G D IPWCD D++ GCERE A+A KGSSDEL  E I+RLSWAL
Sbjct: 1   MDAKIGNFFESVGNFFIGVDQIPWCDSDIVTGCEREVAEAGKGSSDELKNECIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS++PEDVQRGIAMLE +L G ++PL+MREK+YLLAVGY+RSGDY+R            
Sbjct: 61  VHSRRPEDVQRGIAMLETSLGGSNSPLQMREKIYLLAVGYYRSGDYARSRQLVDRCLEIE 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGIAATA TAVGLLAGG+ AA+SRKK
Sbjct: 121 PEWRQALTLRKTVEDKIKKDGVIGIGIAATAVTAVGLLAGGLVAALSRKK 170

[Close]
BLAST of Lsi06G005690 vs. TAIR10
Match: AT3G57090.1 (AT3G57090.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 175.3 bits (443), Expect = 2.7e-44
Identity = 96/170 (56.47%), Postives = 113/170 (66.47%), Query Frame = 1 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           M+AK+ +FF SV  FFSG D IPWCD DVIAGCERE  +A    +++L KE ++RLSWAL
Sbjct: 1   MDAKIGQFFDSVGTFFSGSDKIPWCDGDVIAGCEREVREATDSGTEDLKKECLMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+Q EDVQRGIAMLEA+L     PL+ REKLYLLAVGY+RSG+YSR            
Sbjct: 61  VHSRQTEDVQRGIAMLEASLESSAPPLEDREKLYLLAVGYYRSGNYSRSRQLVDRCIEMQ 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI ATA  AVGL+AGGI AA+SRKK
Sbjct: 121 ADWRQALVLKKTIEDKITKDGVIGIGITATAFGAVGLIAGGIVAAMSRKK 170

[Close]
BLAST of Lsi06G005690 vs. TAIR10
Match: AT5G12390.1 (AT5G12390.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 135.6 bits (340), Expect = 2.4e-32
Identity = 83/173 (47.98%), Postives = 106/173 (61.27%), Query Frame = 1 

Query: 1   MEAKVSKFFGSVSNFFSGG-----DHIPWCDRDVIAGCEREAADAEKGSSDELLKESILR 60
           M+A + K F SVS+FFSG      D  P CD D+I+GCE+E A+A+    +   KE I+R
Sbjct: 1   MDAAIGKVFDSVSDFFSGAASASADEFPLCDSDIISGCEKELAEAQ---DEGRKKECIMR 60

Query: 61  LSWALVHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------- 120
           LSWALVHSK P D+QRGIAMLEA +  D + +K+REKLYLLA+GY+RSGD+SR       
Sbjct: 61  LSWALVHSKMPSDIQRGIAMLEALVVNDTSAMKLREKLYLLALGYYRSGDFSRSRDCIER 120

Query: 121 ------------------------NGVIGIGIAATAATAVGLLAGGIAAAVSR 138
                                   +GVIG+GI   A TAVG++A GIAAA+ R
Sbjct: 121 CLEVEPESGQAQALKKAIEDRIVKDGVIGVGI---AVTAVGVVA-GIAAAILR 166

[Close]
BLAST of Lsi06G005690 vs. NCBI nr
Match: gi|449442575|ref|XP_004139057.1| (PREDICTED: mitochondrial fission 1 protein A [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 4.5e-57
Identity = 126/170 (74.12%), Postives = 133/170 (78.24%), Query Frame = 1 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           MEAKVSKF GSVSNFFSGGDHIPWCD DV+AGCEREAA+AEK SSDELLKESI+RLSWAL
Sbjct: 1   MEAKVSKFLGSVSNFFSGGDHIPWCDCDVVAGCEREAAEAEKSSSDELLKESIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+QPEDVQRGIAMLEAA+SGDD+PLKMREKLYLLAVGYFRSGDYSR            
Sbjct: 61  VHSRQPEDVQRGIAMLEAAISGDDSPLKMREKLYLLAVGYFRSGDYSRSRELVEECLTIA 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI   AATAVGLLAGGIAAAVSRKK
Sbjct: 121 PDWRQAMTLKKSIEDRITKDGVIGIGI---AATAVGLLAGGIAAAVSRKK 167

[Close]
BLAST of Lsi06G005690 vs. NCBI nr
Match: gi|659098944|ref|XP_008450362.1| (PREDICTED: mitochondrial fission 1 protein A [Cucumis melo])

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-56
Identity = 125/170 (73.53%), Postives = 132/170 (77.65%), Query Frame = 1 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           MEAKVSKF GSVSNFFSGGDHIPWCDRDV+AGCEREAA+AEK SS ELLKESI+RLSWAL
Sbjct: 1   MEAKVSKFLGSVSNFFSGGDHIPWCDRDVVAGCEREAAEAEKSSSGELLKESIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHS+QPEDV RGIAMLEAA+SGDD+PLKMREKLYLLAVGYFRSGDYSR            
Sbjct: 61  VHSRQPEDVHRGIAMLEAAISGDDSPLKMREKLYLLAVGYFRSGDYSRSRELVEECLTIA 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGI   AATAVGLLAGGIAAAVSRKK
Sbjct: 121 PDWRQAMTLKKSIEDRITKDGVIGIGI---AATAVGLLAGGIAAAVSRKK 167

[Close]
BLAST of Lsi06G005690 vs. NCBI nr
Match: gi|698527011|ref|XP_009760350.1| (PREDICTED: mitochondrial fission 1 protein A-like [Nicotiana sylvestris])

HSP 1 Score: 207.2 bits (526), Expect = 1.8e-50
Identity = 108/170 (63.53%), Postives = 125/170 (73.53%), Query Frame = 1 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           MEAK+ KF  SV NFFSGGD IPWCD D++ GCERE A+AEKGSSDEL  E I+RLSWAL
Sbjct: 1   MEAKIGKFIESVGNFFSGGDQIPWCDSDIVTGCEREVAEAEKGSSDELKSECIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHSK+PEDVQRGIAMLEA+L G+++PL+MREK+YLLAVGY+RSGDY+R            
Sbjct: 61  VHSKRPEDVQRGIAMLEASLGGNNSPLQMREKIYLLAVGYYRSGDYARSRQLVERCLEIA 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGIAATA TAVG+LAGGI AA+SRKK
Sbjct: 121 PDWRQALTLKQTIEDKITKDGVIGIGIAATAVTAVGILAGGIVAALSRKK 170

[Close]
BLAST of Lsi06G005690 vs. NCBI nr
Match: gi|697151899|ref|XP_009630180.1| (PREDICTED: mitochondrial fission 1 protein A-like [Nicotiana tomentosiformis])

HSP 1 Score: 203.0 bits (515), Expect = 3.4e-49
Identity = 106/170 (62.35%), Postives = 123/170 (72.35%), Query Frame = 1 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           MEAK+ KF  SV NFFSGGD IPWCD +++ GCE E A+AEKGSSDEL  E I+RLSWAL
Sbjct: 1   MEAKIGKFMESVGNFFSGGDQIPWCDSNIVTGCEHEVAEAEKGSSDELKSECIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDYSR------------ 120
           VHSK+PEDVQRGIAMLEA+L G ++PL+MREK+YLLAVGY+RSGDY+R            
Sbjct: 61  VHSKRPEDVQRGIAMLEASLGGSNSPLQMREKIYLLAVGYYRSGDYARSRQLVERCLEIA 120

Query: 121 -------------------NGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                              +GVIGIGIAATA TAVG+LAGGI AA+SRKK
Sbjct: 121 PDWRQALTLKQTIEDKITKDGVIGIGIAATAVTAVGILAGGIVAALSRKK 170

[Close]
BLAST of Lsi06G005690 vs. NCBI nr
Match: gi|702279273|ref|XP_010045053.1| (PREDICTED: mitochondrial fission 1 protein A [Eucalyptus grandis])

HSP 1 Score: 201.8 bits (512), Expect = 7.7e-49
Identity = 107/170 (62.94%), Postives = 128/170 (75.29%), Query Frame = 1 

Query: 1   MEAKVSKFFGSVSNFFSGGDHIPWCDRDVIAGCEREAADAEKGSSDELLKESILRLSWAL 60
           MEAK+S+FFGSVS+FF+G DHIPWCDRDVIAGCERE A+AEK SSDEL+ E I+RLSWAL
Sbjct: 1   MEAKMSQFFGSVSDFFTGADHIPWCDRDVIAGCEREIAEAEKASSDELISECIMRLSWAL 60

Query: 61  VHSKQPEDVQRGIAMLEAALSGDDNPLKMREKLYLLAVGYFRSGDY-------------- 120
           VHS+QPEDVQRGIAMLEA++SG  +PL++RE+LYLLAVGY+RSGDY              
Sbjct: 61  VHSRQPEDVQRGIAMLEASVSGTTSPLQLREQLYLLAVGYYRSGDYTKSRDLVERCLRIA 120

Query: 121 -----------------SRNGVIGIGIAATAATAVGLLAGGIAAAVSRKK 140
                            +++G+IGIGI   A TAVGLLAGG+AAA+SRKK
Sbjct: 121 PDWRQALTLKKTIEDRITKDGIIGIGI---AVTAVGLLAGGLAAALSRKK 167

The following BLAST results are available for this feature:
BLAST of Lsi06G005690 vs. Swiss-Prot
Match NameE-valueIdentityDescription
FIS1A_ARATH4.8e-4356.47Mitochondrial fission 1 protein A OS=Arabidopsis thaliana GN=FIS1A PE=1 SV=1[more]
FIS1B_ARATH4.2e-3147.98Mitochondrial fission 1 protein B OS=Arabidopsis thaliana GN=FIS1B PE=1 SV=1[more]
BLAST of Lsi06G005690 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M2W6_CUCSA3.1e-5774.12Uncharacterized protein OS=Cucumis sativus GN=Csa_1G627410 PE=4 SV=1[more]
A0A059D8Y1_EUCGR5.3e-4962.94Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03723 PE=4 SV=1[more]
A0A0V0HDG0_SOLCH9.1e-4961.18Putative mitochondrial fission 1 protein A-like OS=Solanum chacoense PE=4 SV=1[more]
M1D380_SOLTU2.0e-4860.59Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400031242 PE=4 SV=1[more]
K4D9C3_SOLLC6.5e-4760.00Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of Lsi06G005690 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G57090.12.7e-4456.47 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT5G12390.12.4e-3247.98 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
BLAST of Lsi06G005690 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449442575|ref|XP_004139057.1|4.5e-5774.12PREDICTED: mitochondrial fission 1 protein A [Cucumis sativus][more]
gi|659098944|ref|XP_008450362.1|1.3e-5673.53PREDICTED: mitochondrial fission 1 protein A [Cucumis melo][more]
gi|698527011|ref|XP_009760350.1|1.8e-5063.53PREDICTED: mitochondrial fission 1 protein A-like [Nicotiana sylvestris][more]
gi|697151899|ref|XP_009630180.1|3.4e-4962.35PREDICTED: mitochondrial fission 1 protein A-like [Nicotiana tomentosiformis][more]
gi|702279273|ref|XP_010045053.1|7.7e-4962.94PREDICTED: mitochondrial fission 1 protein A [Eucalyptus grandis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000266mitochondrial fission
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR028058Fis1_TPR_N
IPR016543Fis1
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000266 mitochondrial fission
biological_process GO:0016559 peroxisome fission
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005777 peroxisome
cellular_component GO:0005741 mitochondrial outer membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G005690.1Lsi06G005690.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 17..107
score: 1.0
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 10..137
score: 6.57
IPR016543Mitochondria fission 1 proteinPANTHERPTHR13247TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11coord: 1..139
score: 4.2
IPR028058Fis1, N-terminal tetratricopeptide repeatPFAMPF14852Fis1_TPR_Ncoord: 55..79
score: 1.2
NoneNo IPR availablePANTHERPTHR13247:SF3SUBFAMILY NOT NAMEDcoord: 1..139
score: 4.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi06G005690Csa1G627410Cucumber (Chinese Long) v2culsiB058
Lsi06G005690CSPI01G30840Wild cucumber (PI 183967)cpilsiB059
Lsi06G005690Cucsa.138370Cucumber (Gy14) v1cgylsiB221
Lsi06G005690CmaCh10G008990Cucurbita maxima (Rimu)cmalsiB073
Lsi06G005690CmoCh10G009370Cucurbita moschata (Rifu)cmolsiB059
Lsi06G005690Cla007374Watermelon (97103) v1lsiwmB397
Lsi06G005690MELO3C015136Melon (DHL92) v3.5.1lsimeB396
Lsi06G005690ClCG03G012730Watermelon (Charleston Gray)lsiwcgB364
Lsi06G005690MELO3C015136.2Melon (DHL92) v3.6.1lsimedB418
Lsi06G005690Cla97C03G063000Watermelon (97103) v2lsiwmbB365
Lsi06G005690Bhi02G001261Wax gourdlsiwgoB520
Lsi06G005690Cp4.1LG18g01890Cucurbita pepo (Zucchini)cpelsiB299
Lsi06G005690CsGy1G030090Cucumber (Gy14) v2cgyblsiB055
Lsi06G005690Carg17864Silver-seed gourdcarlsiB886
Lsi06G005690CsaV3_1G043230Cucumber (Chinese Long) v3cuclsiB068
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi06G005690Silver-seed gourdcarlsiB385
Lsi06G005690Silver-seed gourdcarlsiB477
Lsi06G005690Watermelon (97103) v2lsiwmbB361
Lsi06G005690Wax gourdlsiwgoB487
Lsi06G005690Bottle gourd (USVL1VR-Ls)lsilsiB046
Lsi06G005690Cucurbita maxima (Rimu)cmalsiB128
Lsi06G005690Cucurbita maxima (Rimu)cmalsiB527
Lsi06G005690Cucurbita moschata (Rifu)cmolsiB118
Lsi06G005690Cucurbita moschata (Rifu)cmolsiB512
Lsi06G005690Cucurbita pepo (Zucchini)cpelsiB246
Lsi06G005690Cucurbita pepo (Zucchini)cpelsiB563
Lsi06G005690Wild cucumber (PI 183967)cpilsiB475
Lsi06G005690Cucumber (Chinese Long) v2culsiB467
Lsi06G005690Melon (DHL92) v3.5.1lsimeB415
Lsi06G005690Watermelon (Charleston Gray)lsiwcgB360
Lsi06G005690Watermelon (97103) v1lsiwmB410
Lsi06G005690Melon (DHL92) v3.6.1lsimedB439