Lsi06G004260 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAAAAAAAAAACTTCCATTAAATTAGAGCAGCCAAGATCAGTACGAACGAACGAGATCCCAAAAAAGCAAAAGAGAAAAATCGAAATTTGGAATTCCCAAAGTGATCAAAAGCGACAAGAATCAGTGGGTTCTCTCCACTTGCGTGCGTCTCATAATTTTTCCTTCCCTGATTCGGAAAAAACGTGTGTGACAAATCAGGAAAGTTTGAATCCAAAAATCATTTCAATTTTCAATCCCCATTTTCTTCCTTCCACTTGTCCTCTCAGATCTGATCTATTCATCTTCTCACTGCCACAGGTGCGTACTTCTAATCGCTTTCTTTCCAACTTCTTCTTCATTTTTCCTCTTCCTTTATGGGTGTTTCTTTTTTCATGTTATTGGGTTTCTTTTAAGAACCTCCCATCTTGTACTGCTGCAAAACAATCGGGTTTTTATGTTTATGTTTGTATTGATTTTTGATGTTTCTCGATGAATTGGGAAATCGAGAGGCAGCAATATTGATCGCGAGTATATCTGGCTTGCTTTTGTAGCGTTTGATGGTTCATTTTATATCGGGGGTGATATTGATATTGACTTTTTGTGTGAATTTCTGTTTGGTTTCAAGGAAATAGAAATCTTATTTTAATTATTGTGAATGGGCCTTCGTTTTTTACATGTTAAGACTGGAGGGTGGGTGTTTAATAAATTAGTTTTACTTTGAATTCTGAAATATATGCTGTTTATCTTTAGGACCTATGGGCTTGTGCTGCTGGTAGTAGAGGTTGCTGTTCAATGTTTGAGGAGGTGCTCTTGAATCCTCCTTTTCGTGACAAAGGAAGGTTCTTTGGTAGTCTTGTTGTTTTGCACTGTTACAGAGCATTTGGCTTGAGAGGAATAGTTTAGTTTTTTTCTTGCGGGTCAGAGCCCTATGGGGAGGATGTTTGGGATGTGATTAAGTTTAACTCATTCCTGTGGGTGTTTGTTAATATATATATATATGTTTTGTAATTATATGATTAATATTATTTGGGAGTGTTAGTGACTCGATGGGGAAGTTCCTCCTCTTTCCGCCTTTTAGGAGAAGGGCTGCTTTCTTTGGAAAGCTGGGGTGTGTGCCTTGTTATGGGTTTTATGGAGAGAGAGAAATAACATAGTGTTTAGAAGGTTGGAGAGGGACACTAGTGATGTGTGGGTCTTGGTGAAGTTTTATGTCTCCCTTTGGACTTCGATTTCAAAGATCTTTTGTAATTACTCTCAAGTAACATTTTAGTTAGTTGGACCCTGTTTCTTTGAGGGTTTTGTGGTTTGGTTTTTTTGTATGCCCCTGTATTCTTTCATTTTTTCTCAATGAAAGTTGTAATCTCTATCCAAAATAAATTATATATATATATATATATATATATATATATGTGGTTAATATGGTTATTTTGGATTGAAGCCACTATCTGTAATTGGGCGTGAGGATTGTTTTGTTCTTTGTTACGCTCTTGTATATCTTTTCATCAACCTCAATGAATGAATGGTTTCTTATTTTTAAAAAAAATAATTGCAAACTAAACCTGGTTGTTGATAAGAGATGGGTGTAATTATTATACGACTAAGAGTAAAAATTTGATTCTCATGATGATAGATCAAACCTCAAGGTTGGTTTTTGAAAGTGTTGTGGATGGGGATTCAGACGATGGGTTCTCAATTGAACGGCCAACAATCTCATTTACAACCTGCCCCATTGACAAGGCAAAACTCATGGTACGGTCTTACTCTTGATGAGGTTAAAAACCAGTTAGGTGAAATGGGAAAGCCATTAGGCAGCATGAACCTTGATGAGCTTCTTCATAATATCTGGACAGCTGAAGCCAACCAGTCCATGGGAATGGAGAATGAGAGTTTCTCTTCAGTATATTCTCTCCAACGTCAAGCCAGTTTCACATTGGCCAGAGCATTAAGTGGGAAGACTGTGGATGATGTGTGGAGGGAGATCCAACAAGGGCAGAAGAAAAAAAATCGACAAAATTTGAAAAGTGAGAATCGTGAGATTATACTTGGTGATATGACTTTAGAGGATTTCTTGGTACAAGCAGGGATTTATGCTGAGGCTTCTCCAAATCCCATTATGAGCTTGGATGCCATTGATACTATGGCATTGGCAGAGAAGAAGTTTTCACAGAAAATGGGCTTGTTATCATCATCCCCTTCACTAGGTACGCTGTCAGATACAATGACACCAAAACGGAGAAGGGATCCATCAGACACACTCGAGAAGACTATGGAGCGGAGGCTAAAGAGAAAGATCAAGAATAGGGAGTCTGCTGCTCGCTCTCGAGCGAGAAAACAGGTCATTTTTTCGGGAACTTTTCCTCTAAAGGACTATTTATTTATCATATTTCTCTGGTCTGTTAATCTTTATAGCTGATCCAGTGATTCAAATGTAGGCCTACCATAATGAATTGGTGAACAAAGTCTCACGCCTTGAAGAGGAGAATTTAAAGCTCAAGAAAGAGAAGGTGAATGATTTTTTCGCATGTGAATTGTTGTGTGATCATGCACCCATATGCCTGCTTGATTTAGTGACTTTTAAGTTTCAATGA AAAAAAAAAAAAAACTTCCATTAAATTAGAGCAGCCAAGATCAGTACGAACGAACGAGATCCCAAAAAAGCAAAAGAGAAAAATCGAAATTTGGAATTCCCAAAGTGATCAAAAGCGACAAGAATCAGTGGGTTCTCTCCACTTGCGTGCGTCTCATAATTTTTCCTTCCCTGATTCGGAAAAAACGTGTGTGACAAATCAGGAAAGTTTGAATCCAAAAATCATTTCAATTTTCAATCCCCATTTTCTTCCTTCCACTTGTCCTCTCAGATCTGATCTATTCATCTTCTCACTGCCACAGGACCTATGGGCTTGTGCTGCTGGTAGTAGAGGTTGCTGTTCAATGTTTGAGGAGGTGCTCTTGAATCCTCCTTTTCGTGACAAAGGAAGGTTCTTTGATCAAACCTCAAGGTTGGTTTTTGAAAGTGTTGTGGATGGGGATTCAGACGATGGGTTCTCAATTGAACGGCCAACAATCTCATTTACAACCTGCCCCATTGACAAGGCAAAACTCATGGTACGGTCTTACTCTTGATGAGGTTAAAAACCAGTTAGGTGAAATGGGAAAGCCATTAGGCAGCATGAACCTTGATGAGCTTCTTCATAATATCTGGACAGCTGAAGCCAACCAGTCCATGGGAATGGAGAATGAGAGTTTCTCTTCAGTATATTCTCTCCAACGTCAAGCCAGTTTCACATTGGCCAGAGCATTAAGTGGGAAGACTGTGGATGATGTGTGGAGGGAGATCCAACAAGGGCAGAAGAAAAAAAATCGACAAAATTTGAAAAGTGAGAATCGTGAGATTATACTTGGTGATATGACTTTAGAGGATTTCTTGGTACAAGCAGGGATTTATGCTGAGGCTTCTCCAAATCCCATTATGAGCTTGGATGCCATTGATACTATGGCATTGGCAGAGAAGAAGTTTTCACAGAAAATGGGCTTGTTATCATCATCCCCTTCACTAGGTACGCTGTCAGATACAATGACACCAAAACGGAGAAGGGATCCATCAGACACACTCGAGAAGACTATGGAGCGGAGGCTAAAGAGAAAGATCAAGAATAGGGAGTCTGCTGCTCGCTCTCGAGCGAGAAAACAGGCCTACCATAATGAATTGGTGAACAAAGTCTCACGCCTTGAAGAGGAGAATTTAAAGCTCAAGAAAGAGAAGGTGAATGATTTTTTCGCATGTGAATTGTTGTGTGATCATGCACCCATATGCCTGCTTGATTTAGTGACTTTTAAGTTTCAATGA ATGGGGATTCAGACGATGGGTTCTCAATTGAACGGCCAACAATCTCATTTACAACCTGCCCCATTGACAAGGCAAAACTCATGGTACGGTCTTACTCTTGATGAGGTTAAAAACCAGTTAGGTGAAATGGGAAAGCCATTAGGCAGCATGAACCTTGATGAGCTTCTTCATAATATCTGGACAGCTGAAGCCAACCAGTCCATGGGAATGGAGAATGAGAGTTTCTCTTCAGTATATTCTCTCCAACGTCAAGCCAGTTTCACATTGGCCAGAGCATTAAGTGGGAAGACTGTGGATGATGTGTGGAGGGAGATCCAACAAGGGCAGAAGAAAAAAAATCGACAAAATTTGAAAAGTGAGAATCGTGAGATTATACTTGGTGATATGACTTTAGAGGATTTCTTGGTACAAGCAGGGATTTATGCTGAGGCTTCTCCAAATCCCATTATGAGCTTGGATGCCATTGATACTATGGCATTGGCAGAGAAGAAGTTTTCACAGAAAATGGGCTTGTTATCATCATCCCCTTCACTAGGTACGCTGTCAGATACAATGACACCAAAACGGAGAAGGGATCCATCAGACACACTCGAGAAGACTATGGAGCGGAGGCTAAAGAGAAAGATCAAGAATAGGGAGTCTGCTGCTCGCTCTCGAGCGAGAAAACAGGCCTACCATAATGAATTGGTGAACAAAGTCTCACGCCTTGAAGAGGAGAATTTAAAGCTCAAGAAAGAGAAGGTGAATGATTTTTTCGCATGTGAATTGTTGTGTGATCATGCACCCATATGCCTGCTTGATTTAGTGACTTTTAAGTTTCAATGA MGIQTMGSQLNGQQSHLQPAPLTRQNSWYGLTLDEVKNQLGEMGKPLGSMNLDELLHNIWTAEANQSMGMENESFSSVYSLQRQASFTLARALSGKTVDDVWREIQQGQKKKNRQNLKSENREIILGDMTLEDFLVQAGIYAEASPNPIMSLDAIDTMALAEKKFSQKMGLLSSSPSLGTLSDTMTPKRRRDPSDTLEKTMERRLKRKIKNRESAARSRARKQAYHNELVNKVSRLEEENLKLKKEKVNDFFACELLCDHAPICLLDLVTFKFQ
BLAST of Lsi06G004260 vs. Swiss-Prot
Match: AI5L2_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 2 OS=Arabidopsis thaliana GN=DPBF3 PE=1 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 6.8e-41 Identity = 118/258 (45.74%), Postives = 150/258 (58.14%), Query Frame = 1
BLAST of Lsi06G004260 vs. Swiss-Prot
Match: AI5L3_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 3 OS=Arabidopsis thaliana GN=DPBF4 PE=1 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 1.6e-34 Identity = 106/236 (44.92%), Postives = 137/236 (58.05%), Query Frame = 1
BLAST of Lsi06G004260 vs. Swiss-Prot
Match: AI5L4_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 4 OS=Arabidopsis thaliana GN=ABF1 PE=1 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.4e-22 Identity = 65/153 (42.48%), Postives = 85/153 (55.56%), Query Frame = 1
BLAST of Lsi06G004260 vs. Swiss-Prot
Match: AI5L1_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Arabidopsis thaliana GN=DPBF2 PE=1 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.3e-20 Identity = 95/262 (36.26%), Postives = 129/262 (49.24%), Query Frame = 1
BLAST of Lsi06G004260 vs. Swiss-Prot
Match: AI5L7_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 7 OS=Arabidopsis thaliana GN=ABF4 PE=1 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 5.1e-20 Identity = 61/154 (39.61%), Postives = 86/154 (55.84%), Query Frame = 1
BLAST of Lsi06G004260 vs. TrEMBL
Match: A0A0A0LX90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600830 PE=4 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 4.1e-109 Identity = 216/250 (86.40%), Postives = 228/250 (91.20%), Query Frame = 1
BLAST of Lsi06G004260 vs. TrEMBL
Match: F1DQG0_CUCME (BZIP1 OS=Cucumis melo PE=2 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 1.9e-106 Identity = 213/250 (85.20%), Postives = 226/250 (90.40%), Query Frame = 1
BLAST of Lsi06G004260 vs. TrEMBL
Match: I1LWA6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 325.9 bits (834), Expect = 4.8e-86 Identity = 186/271 (68.63%), Postives = 219/271 (80.81%), Query Frame = 1
BLAST of Lsi06G004260 vs. TrEMBL
Match: M5WM13_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa022266mg PE=4 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 1.1e-85 Identity = 177/247 (71.66%), Postives = 205/247 (83.00%), Query Frame = 1
BLAST of Lsi06G004260 vs. TrEMBL
Match: A0A0S2MYK0_PRUPE (BZIP protein 5 OS=Prunus persica PE=2 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 1.1e-85 Identity = 177/247 (71.66%), Postives = 205/247 (83.00%), Query Frame = 1
BLAST of Lsi06G004260 vs. TAIR10
Match: AT3G56850.1 (AT3G56850.1 ABA-responsive element binding protein 3) HSP 1 Score: 169.1 bits (427), Expect = 3.8e-42 Identity = 118/258 (45.74%), Postives = 150/258 (58.14%), Query Frame = 1
BLAST of Lsi06G004260 vs. TAIR10
Match: AT2G41070.1 (AT2G41070.1 Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 147.9 bits (372), Expect = 9.1e-36 Identity = 106/236 (44.92%), Postives = 137/236 (58.05%), Query Frame = 1
BLAST of Lsi06G004260 vs. TAIR10
Match: AT1G49720.2 (AT1G49720.2 abscisic acid responsive element-binding factor 1) HSP 1 Score: 107.5 bits (267), Expect = 1.4e-23 Identity = 65/153 (42.48%), Postives = 85/153 (55.56%), Query Frame = 1
BLAST of Lsi06G004260 vs. TAIR10
Match: AT3G44460.1 (AT3G44460.1 Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 101.7 bits (252), Expect = 7.5e-22 Identity = 95/262 (36.26%), Postives = 129/262 (49.24%), Query Frame = 1
BLAST of Lsi06G004260 vs. TAIR10
Match: AT3G19290.3 (AT3G19290.3 ABRE binding factor 4) HSP 1 Score: 99.8 bits (247), Expect = 2.8e-21 Identity = 61/154 (39.61%), Postives = 86/154 (55.84%), Query Frame = 1
BLAST of Lsi06G004260 vs. NCBI nr
Match: gi|449452690|ref|XP_004144092.1| (PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Cucumis sativus]) HSP 1 Score: 402.5 bits (1033), Expect = 5.8e-109 Identity = 216/250 (86.40%), Postives = 228/250 (91.20%), Query Frame = 1
BLAST of Lsi06G004260 vs. NCBI nr
Match: gi|659100350|ref|XP_008451051.1| (PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 [Cucumis melo]) HSP 1 Score: 395.2 bits (1014), Expect = 9.3e-107 Identity = 214/251 (85.26%), Postives = 227/251 (90.44%), Query Frame = 1
BLAST of Lsi06G004260 vs. NCBI nr
Match: gi|662033850|ref|NP_001284432.1| (uncharacterized protein LOC103492454 [Cucumis melo]) HSP 1 Score: 393.7 bits (1010), Expect = 2.7e-106 Identity = 213/250 (85.20%), Postives = 226/250 (90.40%), Query Frame = 1
BLAST of Lsi06G004260 vs. NCBI nr
Match: gi|1009161105|ref|XP_015898717.1| (PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 [Ziziphus jujuba]) HSP 1 Score: 330.5 bits (846), Expect = 2.8e-87 Identity = 183/262 (69.85%), Postives = 212/262 (80.92%), Query Frame = 1
BLAST of Lsi06G004260 vs. NCBI nr
Match: gi|953704638|gb|ALO81024.1| (bZIP protein 5 [Prunus persica]) HSP 1 Score: 324.7 bits (831), Expect = 1.5e-85 Identity = 177/247 (71.66%), Postives = 205/247 (83.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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