Lsi06G004170 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G004170
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr06 : 4599425 .. 4603746 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTATATAAAATTACAAATTAAAAACAACCCAAAAATTATTAAATAATTAAACATTATTATGAAGCTTTATAACATAAATCTCAACCATGGAATAGATACGTCTTTTCAAAGGTTAAGATTTTTTGAAAGTATATTGAGGACTAAAATTGATACTTCAGACTAGAATTGAACAAATTTCAAATTACATGGACCAAGTGATATCTTAACTAATATATATATTAATGTCTTTGCGTTCCAAAGCTTAGCAAAGTTCAACCGTAATTGACATATAATATCTCTTTTGAAATTAAAGGTTTAAATTTTTATACTCTATTAAAGACATGTTTGGGAGTGATTCTAAAATGGCTAAAATCACTTTTGTATATGTTTTTAATCCTTAAAAACTACTTTTGATGATTGAAAATTATATTTAAAAGTGTAAAATTGAAAATTAAATTAATTTTTGAGTGATTAAAGTGTGTTTATTAGTGATTTTAAAAATGACAAAAGTAATTTTAACGATTTTAAAATTACTCCCAACATGTACTAATTGTACTAAAGATAATAATAGTAATTATAATCTCTTTGTGGTTTTAAAAAATTTACCGGTGATATTTCCACGTTCAAAACTAAAAAAACATAAATCCTAAATAATATATTTTTAAATATGCCACTTTTTAAAACAAATGAATGAAATATTAAGCCAACATGAGCAGCAATATCTACCCAATGGGGGTGTTTTCTCAAATTCAAATTTTTGTCACTTTGAATCTCTAAGCATGGGAGGCAAGAGCATGCGCTACAAAGTTGCACTTATAATTGGTAAAAAGAAACTCGTCAATTAGTCCACACATTTGATTGTCGTGCAAAACATCGACAAAAGATTGTGTTTCATTCATGATCGACCAGATGTGTATAGATGATTAAATTGTAATTTGATGTGGTCTCTTAGTGCAAGTATACATTGTCAGTAAGTAATAACTTGGAAGTATTTCAAGTATCATATCTCTCGAGACTAGATTTAATTTAGATTTTTCTAAAGCAATGTAAGCAATGAAACCAGTGGTAATCAATTAAAATGAGTGATGAATGGTTTGGGTGATGAATAAAAACAGTAAATAATAGTTGATAAACAGGGATTACAGTCTTGTTTCGAGGGTTATGCTTTAGACTATGAGGCCACATCAGGTCGACAGTAACTCAACATGGACAAAAAACTTCTCTTATTCGGGCTTGTCTCAATTTCTTTTAGGAGCCTAAGCAGCTAATTATATATCTCTATGACTAACTAGCTAAATCTTAGAGTATTTTCATACAATTTCTATGTCCTATGATGTACCTTATCTCTAAGTTTACATGACAATCTTATCTCTAGGCTTTTAGTCTCATATTCCTTTGTGAAATGACTTTTTATTTTAACATTCTCAGCACTAAAACTCTAGTAGCATGTTAAATTTTAAGTGACTAATTCAACTTAACAAGTTAACATTAAATTCAATAAAGGAAATGTAATAGTTAAGGCGACATGATGAGTTAGCATTTCCTCAAGCCATAAGATCTTAGGGTATCCACATGACTAAATCCCCTAGAAATTTAGCTCATAACTAAGAAAGAATGAATAGATTCTGTTTAAAATTTATGATTACAATATCAACTTTCAAAGAATAAAGAAATAAGAAATGAAAAGTGCAAAAGAAAACTAAATCAAATATTGTTGGAAAATACAGTAAAAGAACTCCTTGAGGCAAATTTTCGCTCTCTAGGACAAATTCATCTTTCTATACACGTTTTCATGGGGTAGAGATGACCTAGACCTAGGGTTCTTCAGAGAAACTCTCGTTCTTAAAGAGATTCTGAATGAAGCGGTGAGGTTTCTCCTTAGGATCAATGATTTTTTAAGAAAGAGGTTTCTAATCCTTTACATAGGCCTAAAGTAGTTGTAGGGAGGCCGAAAATGATACTCCGAGCGTTTACCAGCATTTCTGGTGCTGAATAACGATTATGGACCAATAAAATAGCAACCACGAATGACTGGCATGAATCTGAAAAATAGCAACCACGAATGACTGGCATGAATCTGAAAAATAGCAACCACGAATGACTGGCATGAATCTGAAAAATTAAGATTTTGATGTGAGCGCATCATAGTCAATTTCTACAAACCAGTCAAAATACTCGGTAAAAGCTCATAAAAATAATCAAAAATAGTAAAAACATACTTTAGACAGTTAAAAGACCTGTACTTGATCAATTTATCCAATTTAGGCCAATTAAAAGAGTAAATAATATGTAAAGTATGACTTTCACTAAGGAAAAGTTCCTAACATAAGTCAAAATCATGCATTTTGTAACATTTATCAATTCACATATCAATTCTTGTCCATCAAAATGGTTGAGAGGAGTAACGAATATACCTCTCATCTAATGGGCATAGACGAACTTCAATGGCCTTGAGGAGAACTTTGCCTGTGAACCCGACATTTCTTAAGCTCGCAACTTGAGTAAAACTCAGATTGGCGAAGAATACGGTCCATAGGTTTCCTTTATTGGAACTATGTTTCTATTTATTTTTGTTTCGAATTGATCAAGGGCGTTTTTACCTTAAAATCATACAGTTACCTCACGGAGAGTTAGCCGCACCTACAAATGATATAAATACTACTATTGCTTTAACTTTACTCACATCATTAGCATATTTCTATGCGGGTCTCGACATAAATCGGACAAAGGTTTTCGTCGCGAGCAATCAGCTTTGTTTTATTTGATTTATGTAAAACTGTGTGTAGCCTATAGAGTATATATATTATTTCTATGTATTCTTACATAGAAACAATATAGTATTTCTCGAAGGATTTTTTTTATATATAAATCAAATAAAACAAAGTTCAAGGGTGTTTTGTAAATTTGTTACAAATGAATTTGATCATAAAGTATCTAATTCATTATACAACCATGATTGATTCTATCATATCATATATTAATTCCAATCACTTTTATTGATTTTTTTAATAAATTAAATTTAAATAAGTTTTTATTGGATACAGCTTCCATTGCCCTTTTATCTTTTATTTTCTCGCAGAAAAAAATACTATAATAACAAACAATTATTTTAAAAGCTACACCAGATGTTGGTGTGTTTGAAAAAACAAGGGTCCAATTCTGCTCGGGTTTCGGGCAAATCGGACCGACAAATAATGTATTTGTTTAACATTTTATATTTGTATACATCTATCTAAAGTAGGAAAGAATGAACATCCTTTATCCCACCTAAAGAATATTTGTACCTTTATAGAAAGGTGACCAACACAAAGAAAAGAGGTTAAATCAATGATACTTCAAAAGGCAAAAAGAAGTCAGAAACAAGCCACTGTCATTTCAGCCCATCTGTGAGAATCTTAGATGCAATAAGTGAATATATGTATCATCACAAATGCCAAAATGTAAAGGAATATAAACACAATAAAATTTCTTGCTCCTTTTCAAATCTTTACCCATATAATATCATCTTCTTCTCATCATTGAAGCTCACAAATTAGAAAAAGCAAATGGCTTCAATTGATCCATGGAACATATAACTATAATTACATTTGATTTCAGCTCTAAGACCCCCCTTTTCCCAGTGCAAGTCATAGTAGCAGATATGTGATTCTATTTCATATTACTTTATACAAAAAAAGGAAAAAAGAAAAATAAAAAAGAAGGGGAAAAAAAAAACAGCTCTAGCTATTACAACTCTAGAGCTGATTCTTATTTCTTATTACCTCATTTGTTGTAGAACAGAGCTTTCACATATCATGCTCAAGTAGAGAAGAGTTATAGACTTAGTAATCGAAAGGTCATTCAGGGTAACCCATCTCGTTATCATGCTCTCGATCTGCAGATAAGCCATTTATATGAATACCGCTGCTGAAACGAGTGACTATTCGACGAGGAGCAAAAAAATCTGGGAATGGATGCCTCCTTCTCAGATTTTGTTGAGTACTCTCTCTCTCAGTTAGGCTTTCACCGTTGCTGCCACTGTTCCCTCCCCAACCGTGCCCACTATCCTGCAGAGGGAGCTCAAGTCGACAAACCGGGCAAGTATTATGTTGGACCAGCCAAGGAAGAATGCAATCAGTGTGATAAATATGATTGCACGGCAACTCTTTGGCTTCAGATCCCAGCTCAAATTTTTCTTTACAGACTGGACAATGAGAGTCGGTGCCAAGGTGCATTTGGTTAATCTTGATTGTAGGCATTGCTTGTATACAAGAGTGAGAAGCAGGAGTTGGAACTGGTTCCCTGTGTTCATTCAAGGAAAGCTGTGCGGCTAATTCTTCCAGTCCCGTACGCTGACTAG

mRNA sequence

ATGGGGCGTTTTTACCTTAAAATCATACAGTTACCTCACGGAGAGTTAGCCGCACCTACAAATGATATAAATACTACTATTGCTTTAACTTTACTCACATCATTAGCATATTTCTATGCGGGTCTCGACATAAATCGGACAAAGAACAGAGCTTTCACATATCATGCTCAAGTAGAGAAGAGTTATAGACTTAGTAATCGAAAGGCTTTCACCGTTGCTGCCACTGTTCCCTCCCCAACCGTGCCCACTATCCTGCAGAGGGAGCTCAAGTCGACAAACCGGGCAAGTATTATGTTGGACCAGCCAAGGAAGAATGCAATCAGTGTGATAAATATGATTGCACGGCAACTCTTTGGCTTCAGATCCCAGCTCAAATTTTTCTTTACAGACTGGACAATGAGAGTCGGTGCCAAGGCATTGCTTGTATACAAGAGTGAGAAGCAGGAGTTGGAACTGGTTCCCTGTGTTCATTCAAGGAAAGCTGTGCGGCTAATTCTTCCAGTCCCGTACGCTGACTAG

Coding sequence (CDS)

ATGGGGCGTTTTTACCTTAAAATCATACAGTTACCTCACGGAGAGTTAGCCGCACCTACAAATGATATAAATACTACTATTGCTTTAACTTTACTCACATCATTAGCATATTTCTATGCGGGTCTCGACATAAATCGGACAAAGAACAGAGCTTTCACATATCATGCTCAAGTAGAGAAGAGTTATAGACTTAGTAATCGAAAGGCTTTCACCGTTGCTGCCACTGTTCCCTCCCCAACCGTGCCCACTATCCTGCAGAGGGAGCTCAAGTCGACAAACCGGGCAAGTATTATGTTGGACCAGCCAAGGAAGAATGCAATCAGTGTGATAAATATGATTGCACGGCAACTCTTTGGCTTCAGATCCCAGCTCAAATTTTTCTTTACAGACTGGACAATGAGAGTCGGTGCCAAGGCATTGCTTGTATACAAGAGTGAGAAGCAGGAGTTGGAACTGGTTCCCTGTGTTCATTCAAGGAAAGCTGTGCGGCTAATTCTTCCAGTCCCGTACGCTGACTAG

Protein sequence

MGRFYLKIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGLDINRTKNRAFTYHAQVEKSYRLSNRKAFTVAATVPSPTVPTILQRELKSTNRASIMLDQPRKNAISVINMIARQLFGFRSQLKFFFTDWTMRVGAKALLVYKSEKQELELVPCVHSRKAVRLILPVPYAD
Homology
[Close]
BLAST of Lsi06G004170 vs. Swiss-Prot
Match: ATPI_IPOPU (ATP synthase subunit a, chloroplastic OS=Ipomoea purpurea GN=atpI PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 9.3e-12
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 1 

Query: 7   KIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGL 43
           KIIQLPHGELAAPTNDINTT+AL LLTSLAYFYAGL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSLAYFYAGL 153

[Close]
BLAST of Lsi06G004170 vs. Swiss-Prot
Match: ATPI_PHAVU (ATP synthase subunit a, chloroplastic OS=Phaseolus vulgaris GN=atpI PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11
Identity = 34/39 (87.18%), Postives = 36/39 (92.31%), Query Frame = 1 

Query: 4   FYLKIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGL 43
           F  KIIQLPHGELAAPTNDINTT+AL LLTS+AYFYAGL
Sbjct: 115 FPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGL 153

[Close]
BLAST of Lsi06G004170 vs. Swiss-Prot
Match: ATPI_MANES (ATP synthase subunit a, chloroplastic OS=Manihot esculenta GN=atpI PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11
Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 1 

Query: 7   KIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGL 43
           KIIQLPHGELAAPTNDINTT+AL LLTS+AYFYAGL
Sbjct: 120 KIIQLPHGELAAPTNDINTTVALALLTSIAYFYAGL 155

[Close]
BLAST of Lsi06G004170 vs. Swiss-Prot
Match: ATPI_SOYBN (ATP synthase subunit a, chloroplastic OS=Glycine max GN=atpI PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11
Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 1 

Query: 7   KIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGL 43
           KIIQLPHGELAAPTNDINTT+AL LLTS+AYFYAGL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSIAYFYAGL 153

[Close]
BLAST of Lsi06G004170 vs. Swiss-Prot
Match: ATPI_PSINU (ATP synthase subunit a, chloroplastic OS=Psilotum nudum GN=atpI PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.6e-11
Identity = 34/39 (87.18%), Postives = 36/39 (92.31%), Query Frame = 1 

Query: 4   FYLKIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGL 43
           F  KIIQLPHGELAAPTNDINTT+AL LLTS+AYFYAGL
Sbjct: 116 FPWKIIQLPHGELAAPTNDINTTVALALLTSVAYFYAGL 154

[Close]
BLAST of Lsi06G004170 vs. TrEMBL
Match: U3R5Y7_9ASTE (ATP synthase subunit a, chloroplastic OS=Ipomoea polpha GN=atpI PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-09
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 1 

Query: 7   KIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGL 43
           KIIQLPHGELAAPTNDINTT+AL LLTSLAYFYAGL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSLAYFYAGL 153

[Close]
BLAST of Lsi06G004170 vs. TrEMBL
Match: U3RC62_9ASTE (ATP synthase subunit a, chloroplastic OS=Ipomoea ternifolia GN=atpI PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-09
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 1 

Query: 7   KIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGL 43
           KIIQLPHGELAAPTNDINTT+AL LLTSLAYFYAGL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSLAYFYAGL 153

[Close]
BLAST of Lsi06G004170 vs. TrEMBL
Match: U3QZT6_IPOBA (ATP synthase subunit a, chloroplastic OS=Ipomoea batatas GN=atpI PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-09
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 1 

Query: 7   KIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGL 43
           KIIQLPHGELAAPTNDINTT+AL LLTSLAYFYAGL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSLAYFYAGL 153

[Close]
BLAST of Lsi06G004170 vs. TrEMBL
Match: U3R5F0_9ASTE (ATP synthase subunit a, chloroplastic OS=Ipomoea pedicellaris GN=atpI PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-09
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 1 

Query: 7   KIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGL 43
           KIIQLPHGELAAPTNDINTT+AL LLTSLAYFYAGL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSLAYFYAGL 153

[Close]
BLAST of Lsi06G004170 vs. TrEMBL
Match: U3RDV9_9ASTE (ATP synthase subunit a, chloroplastic OS=Merremia quinquefolia GN=atpI PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.0e-09
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 1 

Query: 7   KIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGL 43
           KIIQLPHGELAAPTNDINTT+AL LLTSLAYFYAGL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSLAYFYAGL 153

[Close]
BLAST of Lsi06G004170 vs. TAIR10
Match: ATCG00150.1 (ATCG00150.1 ATPase, F0 complex, subunit A protein)

HSP 1 Score: 67.4 bits (163), Expect = 9.8e-12
Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 1 

Query: 7   KIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGL 43
           KIIQLP GELAAPTNDINTT+AL LLTS+AYFYAGL
Sbjct: 120 KIIQLPQGELAAPTNDINTTVALALLTSVAYFYAGL 155

[Close]
BLAST of Lsi06G004170 vs. NCBI nr
Match: gi|937631672|gb|ALI89416.1| (AtpI, partial (chloroplast) [Natsiatum herpeticum])

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 1 

Query: 7   KIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGL 43
           KIIQLPHGELAAPTNDINTT+AL LLTSLAYFYAGL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSLAYFYAGL 153

[Close]
BLAST of Lsi06G004170 vs. NCBI nr
Match: gi|157325518|ref|YP_001468296.1| (ATP synthase CF0 A subunit [Ipomoea purpurea])

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 1 

Query: 7   KIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGL 43
           KIIQLPHGELAAPTNDINTT+AL LLTSLAYFYAGL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSLAYFYAGL 153

[Close]
BLAST of Lsi06G004170 vs. NCBI nr
Match: gi|546353277|gb|AGW97174.1| (ATP synthase CF0 subunit IV (chloroplast) [Ipomoea eriocarpa])

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 1 

Query: 7   KIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGL 43
           KIIQLPHGELAAPTNDINTT+AL LLTSLAYFYAGL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSLAYFYAGL 153

[Close]
BLAST of Lsi06G004170 vs. NCBI nr
Match: gi|948299644|ref|YP_009179044.1| (ATP synthase CF0 A subunit (chloroplast) [Ostrya rehderiana])

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 1 

Query: 7   KIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGL 43
           KIIQLPHGELAAPTNDINTT+AL LLTSLAYFYAGL
Sbjct: 119 KIIQLPHGELAAPTNDINTTVALALLTSLAYFYAGL 154

[Close]
BLAST of Lsi06G004170 vs. NCBI nr
Match: gi|546353965|gb|AGW97854.1| (ATP synthase CF0 subunit IV (chloroplast) [Ipomoea polpha])

HSP 1 Score: 71.6 bits (174), Expect = 1.5e-09
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 1 

Query: 7   KIIQLPHGELAAPTNDINTTIALTLLTSLAYFYAGL 43
           KIIQLPHGELAAPTNDINTT+AL LLTSLAYFYAGL
Sbjct: 118 KIIQLPHGELAAPTNDINTTVALALLTSLAYFYAGL 153

The following BLAST results are available for this feature:
BLAST of Lsi06G004170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATPI_IPOPU9.3e-1294.44ATP synthase subunit a, chloroplastic OS=Ipomoea purpurea GN=atpI PE=3 SV=1[more]
ATPI_PHAVU1.6e-1187.18ATP synthase subunit a, chloroplastic OS=Phaseolus vulgaris GN=atpI PE=3 SV=1[more]
ATPI_MANES1.6e-1191.67ATP synthase subunit a, chloroplastic OS=Manihot esculenta GN=atpI PE=3 SV=1[more]
ATPI_SOYBN1.6e-1191.67ATP synthase subunit a, chloroplastic OS=Glycine max GN=atpI PE=3 SV=1[more]
ATPI_PSINU1.6e-1187.18ATP synthase subunit a, chloroplastic OS=Psilotum nudum GN=atpI PE=3 SV=1[more]
BLAST of Lsi06G004170 vs. TrEMBL
Match NameE-valueIdentityDescription
U3R5Y7_9ASTE1.0e-0994.44ATP synthase subunit a, chloroplastic OS=Ipomoea polpha GN=atpI PE=3 SV=1[more]
U3RC62_9ASTE1.0e-0994.44ATP synthase subunit a, chloroplastic OS=Ipomoea ternifolia GN=atpI PE=3 SV=1[more]
U3QZT6_IPOBA1.0e-0994.44ATP synthase subunit a, chloroplastic OS=Ipomoea batatas GN=atpI PE=3 SV=1[more]
U3R5F0_9ASTE1.0e-0994.44ATP synthase subunit a, chloroplastic OS=Ipomoea pedicellaris GN=atpI PE=3 SV=1[more]
U3RDV9_9ASTE1.0e-0994.44ATP synthase subunit a, chloroplastic OS=Merremia quinquefolia GN=atpI PE=3 SV=1[more]
BLAST of Lsi06G004170 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00150.19.8e-1288.89ATCG00150.1 ATPase, F0 complex, subunit A protein[more]
BLAST of Lsi06G004170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|937631672|gb|ALI89416.1|1.5e-0994.44AtpI, partial (chloroplast) [Natsiatum herpeticum][more]
gi|157325518|ref|YP_001468296.1|1.5e-0994.44ATP synthase CF0 A subunit [Ipomoea purpurea][more]
gi|546353277|gb|AGW97174.1|1.5e-0994.44ATP synthase CF0 subunit IV (chloroplast) [Ipomoea eriocarpa][more]
gi|948299644|ref|YP_009179044.1|1.5e-0994.44ATP synthase CF0 A subunit (chloroplast) [Ostrya rehderiana][more]
gi|546353965|gb|AGW97854.1|1.5e-0994.44ATP synthase CF0 subunit IV (chloroplast) [Ipomoea polpha][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0005575 cellular_component
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G004170.1Lsi06G004170.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi06G004170Cucumber (Chinese Long) v3cuclsiB068
Lsi06G004170Watermelon (97103) v2lsiwmbB365
Lsi06G004170Wax gourdlsiwgoB517
Lsi06G004170Cucumber (Gy14) v1cgylsiB230
Lsi06G004170Cucurbita maxima (Rimu)cmalsiB073
Lsi06G004170Cucurbita maxima (Rimu)cmalsiB128
Lsi06G004170Cucurbita moschata (Rifu)cmolsiB059
Lsi06G004170Cucurbita moschata (Rifu)cmolsiB118
Lsi06G004170Cucurbita pepo (Zucchini)cpelsiB299
Lsi06G004170Cucurbita pepo (Zucchini)cpelsiB563
Lsi06G004170Wild cucumber (PI 183967)cpilsiB059
Lsi06G004170Cucumber (Chinese Long) v2culsiB058
Lsi06G004170Melon (DHL92) v3.5.1lsimeB396
Lsi06G004170Watermelon (Charleston Gray)lsiwcgB364
Lsi06G004170Watermelon (97103) v1lsiwmB396
Lsi06G004170Cucumber (Gy14) v2cgyblsiB055
Lsi06G004170Melon (DHL92) v3.6.1lsimedB418
Lsi06G004170Silver-seed gourdcarlsiB021
Lsi06G004170Silver-seed gourdcarlsiB155