Lsi06G003800 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G003800
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Uncharacterised conserved protein UCP022280
Location	chr06 : 4199568 .. 4205371 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTAATGCATTTCATAAGATTCATTTGGGGGAGAAAAATAAGCCAAGCAGGGAAGTGAACCCTTTCCATCGCACTTCATAAACTGGTCGGAATTTCTACGGCGGTGCCGGTAGAGGAGAGAGTTGAAGGCGAAACACCGTTCGCCGGAATCGGAGAAAAATGGGAGCCGGAGAGGAGCATCAACCGGAGCCATCGCTCGAGAATGTAAACGCAGCATCTTCCATATCGGCAATTGCAGAGGACCTGCAGCGCACGGTTGTTCAATCTAAGGATTCTGCAATTCGCTCTGCTCGTTCTCTCCAAGAAGCCTCTTCCTCCCATATCCGTTCCTTCCAGGTTGCGTCCCTAGTCGACTTTTTAATCCACTATCATTTCGCATACTGGCTTTTATTTCTGTTATACTCTCATTAGATATCTGTAGAGTTTATATTCTGCATTGCTTAAAGTTGTTGAATCGAAATCAATTCTGCTGTGAAATTCTCGTCATACTGAAACCTGTTATATATCGTAAGAAGACTTTATTTTAGCTGTTACTAATGGGAATTTGAGGAGAATGTCTCGTTTGATCATAATTCAGTGGAAATGTGGGATTTTTGAGAAAGGGACTAGAGAGAACTATCGATAACTACGTAGAATTGGATAAATGGTTGAAACAAAATTAAGATGGAACGGAGAAGCAAATTATTGTACTAATTGATTGGTTGGTTGTGTAAAGAAAGATGAAAAGCTTTGAGATTATACACTTCCAATCAAAGGGTCCTCTCTCAGTCTCTCCTCTTTCAATCCCTCTCATGGGAACCCTAACCACCGAATATCTCTGAATCAATGGCTGCCGTTTCCAAAGCTTCTCTCATGGCTCTCATTGCCATCATCTTTGCCGTGGCCTCAGTCACCGCTTAGGAGGCTTCGGCCCCCAGCCCGGCCTCCCCTGCCACCTCCATTGCTCCGTCGTTTGTCTCTGCTTGCCTAACTGCCTTCGTTGCTCTTGCCTTCGGATCTACTCTCAGGATCTGAGGTGTCGGCCTTCCGATATGGTGATTGATTTTGTCATGATTTCATATATTTGTGCTCTGTTTTTTTTTTCTTGAAGTAACCTTGGGGTGGAAGAATTTGTTTTAGACGATTTCGAAGGGATTTTAATTTCTACACGTTTGGTACAGAGGACCTCTTTTGATACACACTCTTATATATAGAATGCAGGCTGTGTTGGTTTGATCACGATGGTGCTATATCTTGTTGATTCTGATTAGTAAATAAATTGTTTCATTCTAAGGGAAAAAAAGGGGGAAAAAAAACCTTTTGATTTCAAAAAACAGTTTAGATTTTCTCCCTAATTCCTACACTTGACCCAAAACTTCCACAGTTCCACTTACTTTCTAACGGAATTTCTGGTAAGTGATAAGGGGATCATGAAAAACATTGAAGTGCTCTTTTTAATTATGGACTCTGGAGATACCTATTTATTTCCGAGGCTATTGTCAAATCAGAAGTTAAAGAATAAAAAAAGTGGAAAAGAAATTTCTGTTGTTTCATTTCTTCCTGACTTTCCTGTGCTTCCGATCCTGGTCTTAGTCCCACCCTTTTTGGTTCTGCTGAAATCTGACGAGAGTTGCATCAGTTCGCTGCTTTCTCTGTGATGCACGAGATATTTACCATACAACATAACCCCGTCACTTTTAACAAAGAAGTTTGGTCTACAATTGGAAGATCAAAAGTTTCTAGATTCGAGATGGTCAAATGAATTATTGTTTTTTTGACGACCAACCAGAATCGAGATGGTCAAGAAATTATATAACATTTACAGATTCAATTTGAGGAACGCGGTTGATGTCCTATCAGGATAAGAAATACAAAGGTTAATGAAGGAGTAACAAAAATCTAACAGTTCACCTATGGTGTTGGGTACTGATAACTGTTTGGTTTTTGTGTTTGATATCATATGTCCCATTAGCTGCTTGGGCAGTGATCCTGCTCTTTGTCATACTATTGATGGTTTGTGTATGGATGATCAATTTTTTGCTCAGTTATGTGTTTTGCAATTAACGTATTATTACTGATTGTGCGTATGTTAAATTTATATTTTTGGTATTTTTTTCTTTCCTTCTCATCTTGCAACTCCATTTTGAGATGAATGCAATAATCTTTCAGGATTTTGTACCCCGAGCAGCATCACAGTTCAAAACTCACGAAGATGCTTTTTTCAGCAAAGTTAAAGGTCTCTTTTTATGTTTCTTGTCCTCCGATTATCTTCATGCTTTAGAACTTCAGCAAAGTCAATATTGGCTTGACTGGAATATTGCCCTAGTCCTTCTTGTTGAAATTAGTTACGAAGTGAATTAGAACTGTCTATTGAAACAAGAGGAACTTTAGAGGAGTGAGTGATTTGTGAGTGAGGTGGTCTCTTATTAGATTTAATACCTTGTTTTGGGTTTCTGTTTACAAACGGAAATAAATGTAATTATCCCTGAGGTAGTTTGTTCCCTTTGGTAATTTTGGGGGATAAGGAAGCAAACTTTTTGTTAGTTTAGTTTAGGTCTACTGTCGATTATTTTGTAAACTTCCACTAAACTAATTAAAAGTTTGTTTCCTTTCCCCAAAAATTGCCCAAGGTAATTTTGTGGCAAGGATATCCCAAGAAGATAAATTTATTCTTATTCTTCCAGCGTTACAGTAGATTAACTCAGCTTGCAGCGGTTTTTCATTAGCTCCCAATGGAAAGGTTTATATATATATGTGTGTATGTATATATATATGATTATTATGATTATAATTATATTTGAATAGAAAAGTCATATCTTTTTCATACAAATTAAGAAGAGAAGTTTTTATTTTAATTTTGCATCTGTATTTAATAATGCAATCGTATTTATTTATGTTATGATATCACTGTGTAGATGAGTTTAAGATAGCGAGGGAACACCCAGCTGCTACTATTGGAGTTGCTGTTACAGCTGGCCTTCTCATTATGCGAGGTATGGAGTAAATATTTTCCTCAACGCCAAAGCTGGTGATTAGTTTATTTTAAATACAGATTTCAACGATCTCACTTCTGATCCTCCTGTTCTAATCTGTGTAATTCTAGTAGTTAGTATTAGGCCTTGGCCCTGTTGTGTTGTGGGATTTTCTATTCTTTGGAGATTGACCAAGCTTCTTCCACGTCAATTTCTTGTTATCTATCAAGGAAATGGTTTAGTCTCGTGTCATCTTTGTCATGTTGCAAATTGAGTCTATTATTCTATTCAGCATCACTTGGATGAACACGTTAGATAGGTTTGTTGAAATTAACTCATCAAAATGATTTTAGATTGAATTCATTTGTTTGCATAATCAGATGAGAGTTATGTAATATAGGCTTGAACAGGGAAAGAGAGTGATGAGAAAGAACCATGAGAACTTAGTCTAGTAGCCAAGCTTGTATCCCATATGGTTTGGGATTCAAGTTCTCAAGACCCTTGTGTCATGTGTGGCAACGTGATGAAGAGTTTCCTATTATCAAGACTCAGGGAGTCATTCAGGATGGTGTAGTGCTGTGTGTAATTTTAGTTCAGTTAGAAGCCCATGGTTCTTCATTGCTACCTAAATGCAGAATTTTTTGTCTCCTCTAAAGTCTCTCTCTCTCTCTCTCCTTTTTTATTTTTTTATTTTTATTTTAAGAAGAACCTCCAAAGTAGTTCATTCAATCGAAGTCAAATTTATTCTTGGTGAATGATCTATTCTCTTTTGGGAGGATGTGCGAGCTATTACTGTGAAGGGGTATTTCTCCCTTCCCTATTCTTTACACCTGTCTCTTAGTAAAATGACCACTGATGTAAGATTGGAATATTTAGAGTTCTTGGATCTTAATAGTGGAAGAAATTTAATGATAGTCTCCAAATGGTTTCACATCCATGTGTGAAGGTTGCTTCTCCCTTATATTTGAGAAGTCAGATCTTGGAAAGGGCCAGGGTTGTTCACTTAGAAACACATCTCTCTCTTGGAGATCACTGACTAGAACCAAACTGTTCAGAGGACTTCTTTTTAGGGCTTCACTATGGTGTTTTACTTGTCCAAACTTTTTCCTTTTAGTAATTTTCTATCTCTTCTTTTATTGCCAATTGAAATCAAATCAAACGCACATCAGCACCACTATTGTTGCCAATTGAAGAGCCTTCATATAACTTCCTTGGTTTTGTTTGAGAGCTAGCCGTTTTGTTCCCTTCTTTTTTTTTCATTATAACAATGTTTTTCTTTTTCTTTTTTTTTTTTTTAAATGAAAACAAATATTTCCCTAAAATAGTGAAAAGTTAGGGAGTGCAGAATTCCCTTTAGGAGTATCCAAGATCTCCCTTACGATCAATAAAATCGAGAATTATAAACAGTCCTTCAGAAAATACAAGAATCCCCACTTGGCAAAAAAGACTTTCACATGTATCTCATTCTCCACAAAAAATTTCAAGAAACCATCTAGAGATACATTTGATTATTTATTTATTTGATAAATATGAGGCATTTGAAATTCATTCTGCATAAATTTGGGCAATCTGATTTTTAGCAAACTACAAATGAGGACAACAGATTTTACAGAAAAAGCCATCAATGAATTTTGTTTCTAATTGAAGAGGAAGAAAATGCCAGCACGAGGGGGAAAATGGAAGAAAGAAAGTGTAATCAAGTTTTTTCTTTTTGGTTACATATGCGGTGTTAGTCACACTTTTTCCTTGTGTCAGCCTTGGGAAAAAAATTTCCAAGATATTATTGTCATTTTCCTGCATGGAATTGCCTTGATTATATTTGGGTTTGATCCTTTCCTTGTTTGTTTGTTTTTTTTTTTAAATTATTATTATTATTATTATTATTATAATTTCCCTTTATTTTTGTGTATGTAAAAATCCGCCTTAATTTTTAAGGATTGCTCTTCTCTGTAGGACCAAGAAGATTTCTGTTTCGTCATACGTTGGGTCGATTTCAATCTGAGGAGGTTCTTGCCTTATTTATTTACTTAACTATCCCATCTTGGATTATGAATGAATTGTTGATGTATCCATTCTCATTGTATGCATGCCAATTGGGATGGAATTTGGAATAATCTGAGTTTTGACAGCACTCTGGACTAGTTCATTATTTTCTTTCGCCCTGTACCGTATTTCTCTAGTTGATTATTGCTGATTGTTTTATTATTGTGTCCCTTTGAGCAGGCAAATTTTTTAAAGGCTGAGAAGCATGTAAAGGAGTTGAACCTTTCAGTAGACCTGATGAAGAAAGAGAGCAAAAAACTACTTGAGAGGGCTGCTCTAGCTGAGAAGGATATGAAATACGGCCACAACGAGCTGATGTAGAAGCATTGTAGTAGTCAAAACATATAAAAGTTTAGTACTACTAGATTCTCTGGATCTGACTATTTTAATATACAGGAATGCTGGAAGTCAAATTCAACATCTTTCAAGGTCAATTTACAAGGCTGAAGCCCAAGCTGCAGGTGTGTATATTGAGTTTACTCTAGTTCAATTTCTTCTTGTTAATTTGATAGTCCAACCGTCTTAAATTATAGACATAAGTCACATAACAGTGAATTGGATATTGAGATGCTTCCCTATCATTATAAATATCTTGACGGATTTGTGCAAAGGGGGCAATGGAAGTATAGATCTTTGAAGATAGTATTCTAGATCTCATAATGTTGCATCTTATTGATATATCTTTGGTATTGATTTTAGGAACTAAAATTCATCTTTCTTATATCTTCATCTATAGTATGAAAACCCGTGGCTCCTTTGCAGTAGTTGTACTATTCATGGGGTGGACTGCAACCACATCATTCACTCCT

mRNA sequence

GACTAATGCATTTCATAAGATTCATTTGGGGGAGAAAAATAAGCCAAGCAGGGAAGTGAACCCTTTCCATCGCACTTCATAAACTGGTCGGAATTTCTACGGCGGTGCCGGTAGAGGAGAGAGTTGAAGGCGAAACACCGTTCGCCGGAATCGGAGAAAAATGGGAGCCGGAGAGGAGCATCAACCGGAGCCATCGCTCGAGAATGTAAACGCAGCATCTTCCATATCGGCAATTGCAGAGGACCTGCAGCGCACGGTTGTTCAATCTAAGGATTCTGCAATTCGCTCTGCTCGTTCTCTCCAAGAAGCCTCTTCCTCCCATATCCGTTCCTTCCAGGATTTTGTACCCCGAGCAGCATCACAGTTCAAAACTCACGAAGATGCTTTTTTCAGCAAAGTTAAAGATGAGTTTAAGATAGCGAGGGAACACCCAGCTGCTACTATTGGAGTTGCTGTTACAGCTGGCCTTCTCATTATGCGAGGACCAAGAAGATTTCTGTTTCGTCATACGTTGGGTCGATTTCAATCTGAGGAGGCAAATTTTTTAAAGGCTGAGAAGCATGTAAAGGAGTTGAACCTTTCAGTAGACCTGATGAAGAAAGAGAGCAAAAAACTACTTGAGAGGGCTGCTCTAGCTGAGAAGGATATGAAATACGGCCACAACGAGCTGATGAATGCTGGAAGTCAAATTCAACATCTTTCAAGGTCAATTTACAAGGCTGAAGCCCAAGCTGCAGGAACTAAAATTCATCTTTCTTATATCTTCATCTATAGTATGAAAACCCGTGGCTCCTTTGCAGTAGTTGTACTATTCATGGGGTGGACTGCAACCACATCATTCACTCCT

Coding sequence (CDS)

ATGGGAGCCGGAGAGGAGCATCAACCGGAGCCATCGCTCGAGAATGTAAACGCAGCATCTTCCATATCGGCAATTGCAGAGGACCTGCAGCGCACGGTTGTTCAATCTAAGGATTCTGCAATTCGCTCTGCTCGTTCTCTCCAAGAAGCCTCTTCCTCCCATATCCGTTCCTTCCAGGATTTTGTACCCCGAGCAGCATCACAGTTCAAAACTCACGAAGATGCTTTTTTCAGCAAAGTTAAAGATGAGTTTAAGATAGCGAGGGAACACCCAGCTGCTACTATTGGAGTTGCTGTTACAGCTGGCCTTCTCATTATGCGAGGACCAAGAAGATTTCTGTTTCGTCATACGTTGGGTCGATTTCAATCTGAGGAGGCAAATTTTTTAAAGGCTGAGAAGCATGTAAAGGAGTTGAACCTTTCAGTAGACCTGATGAAGAAAGAGAGCAAAAAACTACTTGAGAGGGCTGCTCTAGCTGAGAAGGATATGAAATACGGCCACAACGAGCTGATGAATGCTGGAAGTCAAATTCAACATCTTTCAAGGTCAATTTACAAGGCTGAAGCCCAAGCTGCAGGAACTAAAATTCATCTTTCTTATATCTTCATCTATAGTATGAAAACCCGTGGCTCCTTTGCAGTAGTTGTACTATTCATGGGGTGGACTGCAACCACATCATTCACTCCT

Protein sequence

MGAGEEHQPEPSLENVNAASSISAIAEDLQRTVVQSKDSAIRSARSLQEASSSHIRSFQDFVPRAASQFKTHEDAFFSKVKDEFKIAREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGRFQSEEANFLKAEKHVKELNLSVDLMKKESKKLLERAALAEKDMKYGHNELMNAGSQIQHLSRSIYKAEAQAAGTKIHLSYIFIYSMKTRGSFAVVVLFMGWTATTSFTP

Homology

[Close]

BLAST of Lsi06G003800 vs. TrEMBL
Match: A0A0A0LZ64_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599380 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.1e-86
Identity = 174/192 (90.62%), Postives = 181/192 (94.27%), Query Frame = 1


Query: 1   MGAGEEHQPEPSLENVNAASSISAIAEDLQRTVVQSKDSAIRSARSLQEASSSHIRSFQD 60
           MGAGEEHQPEP+LENV A SSISAIAEDLQRTVVQSKDSAIRSARS Q+ASSSHIRS QD
Sbjct: 1   MGAGEEHQPEPTLENVTAPSSISAIAEDLQRTVVQSKDSAIRSARSFQQASSSHIRSLQD 60

Query: 61  FVPRAASQFKTHEDAFFSKVKDEFKIAREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGR 120
           FVP+A SQFKT+ED FF K+ DE KIAREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGR
Sbjct: 61  FVPQATSQFKTYEDTFFRKLTDELKIAREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGR 120

Query: 121 FQSEEANFLKAEKHVKELNLSVDLMKKESKKLLERAALAEKDMKYGHNELMNAGSQIQHL 180
           FQ+EEA+FLKAEKHVKELNLSVDLMK ESKKLLERAALAEKDMKYGHNELMNAGSQIQ L
Sbjct: 121 FQTEEASFLKAEKHVKELNLSVDLMKNESKKLLERAALAEKDMKYGHNELMNAGSQIQRL 180

Query: 181 SRSIYKAEAQAA 193
           SRSIYKAEAQAA
Sbjct: 181 SRSIYKAEAQAA 192

[Close]

BLAST of Lsi06G003800 vs. TrEMBL
Match: B9SBM3_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0342690 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.6e-61
Identity = 125/167 (74.85%), Postives = 145/167 (86.83%), Query Frame = 1


Query: 27  EDLQRTVVQSKDSAIRSARSLQEASSSHIRSFQDFVPRAASQFKTHEDAFFSKVKDEFKI 86
           EDLQRTV++SKDSAIRSARSL + SSS +RS QD VP+A S F+T+ED+FF+K+K+E  I
Sbjct: 51  EDLQRTVIESKDSAIRSARSLHQNSSSRLRSLQDHVPQALSLFRTYEDSFFNKIKEELMI 110

Query: 87  AREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGRFQSEEANFLKAEKHVKELNLSVDLMK 146
           AREHP   +GVAVTAG L+MRGPRRFLFRHT GRFQSEEA FLK EK+VKELNLSVDLMK
Sbjct: 111 AREHPVEVVGVAVTAGFLLMRGPRRFLFRHTFGRFQSEEARFLKTEKNVKELNLSVDLMK 170

Query: 147 KESKKLLERAALAEKDMKYGHNELMNAGSQIQHLSRSIYKAEAQAAG 194
            ES+KLLERA+LAEKDMK+GH ELM+AGSQIQ L++SIYK E Q AG
Sbjct: 171 NESRKLLERASLAEKDMKHGHTELMDAGSQIQRLAKSIYKVETQVAG 217

[Close]

BLAST of Lsi06G003800 vs. TrEMBL
Match: D7SLP2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g00100 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.0e-57
Identity = 119/169 (70.41%), Postives = 143/169 (84.62%), Query Frame = 1


Query: 24  AIAEDLQRTVVQSKDSAIRSARSLQEASSSHIRSFQDFVPRAASQFKTHEDAFFSKVKDE 83
           + AEDLQRTV +S DSAIRSA SLQ+ SSSH+RS Q+F+P+  SQ++T+EDAFF KVKDE
Sbjct: 29  SFAEDLQRTVSESADSAIRSALSLQQNSSSHLRSLQEFIPQMESQYRTYEDAFFKKVKDE 88

Query: 84  FKIAREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGRFQSEEANFLKAEKHVKELNLSVD 143
              A+EHP     VAVTAGL+ +RGPRRFLF HTLGRFQSEEA F++AEK+VKELNLSVD
Sbjct: 89  LTSAKEHPVVVGAVAVTAGLIFLRGPRRFLFHHTLGRFQSEEAQFVRAEKNVKELNLSVD 148

Query: 144 LMKKESKKLLERAALAEKDMKYGHNELMNAGSQIQHLSRSIYKAEAQAA 193
           LMK ES+KLLERAALAEKDMK GH ELMN GSQ++ L+++++K EAQAA
Sbjct: 149 LMKNESRKLLERAALAEKDMKCGHTELMNTGSQLKRLAKTVFKVEAQAA 197

[Close]

BLAST of Lsi06G003800 vs. TrEMBL
Match: A0A061GSY8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_039966 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.9e-57
Identity = 119/166 (71.69%), Postives = 143/166 (86.14%), Query Frame = 1


Query: 27  EDLQRTVVQSKDSAIRSARSLQEASSSHIRSFQDFVPRAASQFKTHEDAFFSKVKDEFKI 86
           E+LQR++  SK+SAI+SARSL   SS+H+RS QDFVP A S++K++EDAF +K+K+E   
Sbjct: 24  EELQRSLQDSKESAIQSARSLHHNSSTHLRSLQDFVPHAFSRYKSYEDAFVNKLKEELMS 83

Query: 87  AREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGRFQSEEANFLKAEKHVKELNLSVDLMK 146
           A+EHPAA IG+ VTA L +M GPRR LFR+TLGRFQSEEA FL+AEK+VKELNLSVD+MK
Sbjct: 84  AKEHPAAAIGITVTAALFLMPGPRRLLFRNTLGRFQSEEAQFLRAEKNVKELNLSVDMMK 143

Query: 147 KESKKLLERAALAEKDMKYGHNELMNAGSQIQHLSRSIYKAEAQAA 193
           KES KLLERAALAEKDMK GH ELMNAG QIQHL++S+YKAEAQAA
Sbjct: 144 KESSKLLERAALAEKDMKRGHKELMNAGGQIQHLAKSVYKAEAQAA 189

[Close]

BLAST of Lsi06G003800 vs. TrEMBL
Match: D7MF99_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_913923 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.4e-56
Identity = 115/166 (69.28%), Postives = 142/166 (85.54%), Query Frame = 1


Query: 27  EDLQRTVVQSKDSAIRSARSLQEASSSHIRSFQDFVPRAASQFKTHEDAFFSKVKDEFKI 86
           +D QRTV +S DSA+RSARSL+E S+S  RS QDF+P A +Q+KT+E+AFFSKV +E   
Sbjct: 49  DDFQRTVKESTDSAMRSARSLRENSTSQFRSIQDFIPHALTQYKTYENAFFSKVTEELIY 108

Query: 87  AREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGRFQSEEANFLKAEKHVKELNLSVDLMK 146
           A+EHPAAT+G+ V AGL++MRGPRRFLFRHTLGRFQSEEA FLKAEKHV+ELN+SVDLMK
Sbjct: 109 AKEHPAATVGIGVAAGLVLMRGPRRFLFRHTLGRFQSEEAQFLKAEKHVQELNMSVDLMK 168

Query: 147 KESKKLLERAALAEKDMKYGHNELMNAGSQIQHLSRSIYKAEAQAA 193
           KES+KLLER ALAEKDMK G +ELMN+G+ I  L++S++K E +AA
Sbjct: 169 KESRKLLERTALAEKDMKRGLSELMNSGNDIHRLAKSVHKVECEAA 214

[Close]

BLAST of Lsi06G003800 vs. TAIR10
Match: AT4G26410.1 (AT4G26410.1 Uncharacterised conserved protein UCP022280)

HSP 1 Score: 224.6 bits (571), Expect = 6.4e-59
Identity = 116/165 (70.30%), Postives = 142/165 (86.06%), Query Frame = 1


Query: 28  DLQRTVVQSKDSAIRSARSLQEASSSHIRSFQDFVPRAASQFKTHEDAFFSKVKDEFKIA 87
           DLQRTV +SKD+A+RSARSL+E S+S  RS QDF+P A +Q+KT+E+AFFSKV DE   A
Sbjct: 50  DLQRTVKESKDTAMRSARSLRENSTSQFRSIQDFIPHALTQYKTYENAFFSKVTDELIYA 109

Query: 88  REHPAATIGVAVTAGLLIMRGPRRFLFRHTLGRFQSEEANFLKAEKHVKELNLSVDLMKK 147
           +EHPAA IG+ V A L++MRGPRRFLFR+TLGRFQSEEA FLKAEKHV+ELN+SVDLMKK
Sbjct: 110 KEHPAAAIGIGVAASLVLMRGPRRFLFRNTLGRFQSEEAQFLKAEKHVQELNMSVDLMKK 169

Query: 148 ESKKLLERAALAEKDMKYGHNELMNAGSQIQHLSRSIYKAEAQAA 193
           ES+KLLER ALAEKDMK G +ELMN+G+ I  L++S++KAE +AA
Sbjct: 170 ESRKLLERTALAEKDMKRGLSELMNSGNDIHRLAKSVHKAECEAA 214

[Close]

BLAST of Lsi06G003800 vs. TAIR10
Match: AT2G45060.1 (AT2G45060.1 Uncharacterised conserved protein UCP022280)

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-19
Identity = 68/197 (34.52%), Postives = 109/197 (55.33%), Query Frame = 1


Query: 6   EHQPEPSLENVNAASSIS-AIAEDL--QRTVVQSKDSAIRSARS----LQEASSSHIRSF 65
           E+Q   +    NAAS I  A+ + L  Q+T+ ++ DS I ++++    +++ S +H    
Sbjct: 30  EYQKIATTTVENAASWIDDALRQALVYQKTITETVDSTIDASKARLSQIRDTSVAHTSQT 89

Query: 66  QDFVPRAASQFKTHEDAFFSKVKDEFKIAREHPAATIGVAVTAGLLIMRGPRRFLFRHTL 125
            D +   AS++  +E   F K+KD   +A  HP  +  +A   G+  ++  RRF++ +T+
Sbjct: 90  IDSLRDIASEYNVYEQMVFGKIKDGVNVAASHPLISGTLAFGVGIFALKKTRRFVYYNTV 149

Query: 126 GRFQSEEANFLKAEKHVKELNLSVDLMKKESKKLLERAALAEKDMKYGHNELMNAGSQIQ 185
             F SEEA   +A+  VKEL  S+D +K ES+KL   A +AE++   G  +L  AG QI+
Sbjct: 150 RMFVSEEALLSRADLKVKELRQSMDRLKAESEKLERVATVAEEEFIRGRMKLRQAGKQIR 209

Query: 186 HLSRSIYKAEAQAAGTK 196
               S YK E QAAG K
Sbjct: 210 GAISSAYKIEKQAAGLK 226

[Close]

BLAST of Lsi06G003800 vs. NCBI nr
Match: gi|659100233|ref|XP_008450994.1| (PREDICTED: uncharacterized protein LOC103492410 [Cucumis melo])

HSP 1 Score: 334.7 bits (857), Expect = 1.2e-88
Identity = 179/192 (93.23%), Postives = 184/192 (95.83%), Query Frame = 1


Query: 1   MGAGEEHQPEPSLENVNAASSISAIAEDLQRTVVQSKDSAIRSARSLQEASSSHIRSFQD 60
           MGAGEE QPEP+LENV  ASSISAIAEDLQRTVVQSKDSAIRSARSLQEASSSHIRSFQD
Sbjct: 1   MGAGEEQQPEPTLENVTTASSISAIAEDLQRTVVQSKDSAIRSARSLQEASSSHIRSFQD 60

Query: 61  FVPRAASQFKTHEDAFFSKVKDEFKIAREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGR 120
           FVPRA SQFKT+EDAFF K+ DE KIAREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGR
Sbjct: 61  FVPRATSQFKTYEDAFFRKLTDELKIAREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGR 120

Query: 121 FQSEEANFLKAEKHVKELNLSVDLMKKESKKLLERAALAEKDMKYGHNELMNAGSQIQHL 180
           FQ+EEA+FLKAEKHVKELNLSVDLMK ESKKLLERAALAEKDMKYGHNELMNAGSQIQHL
Sbjct: 121 FQTEEASFLKAEKHVKELNLSVDLMKNESKKLLERAALAEKDMKYGHNELMNAGSQIQHL 180

Query: 181 SRSIYKAEAQAA 193
           SRSIYKAEAQAA
Sbjct: 181 SRSIYKAEAQAA 192

[Close]

BLAST of Lsi06G003800 vs. NCBI nr
Match: gi|449452634|ref|XP_004144064.1| (PREDICTED: uncharacterized protein LOC101216418 [Cucumis sativus])

HSP 1 Score: 326.2 bits (835), Expect = 4.4e-86
Identity = 174/192 (90.62%), Postives = 181/192 (94.27%), Query Frame = 1


Query: 1   MGAGEEHQPEPSLENVNAASSISAIAEDLQRTVVQSKDSAIRSARSLQEASSSHIRSFQD 60
           MGAGEEHQPEP+LENV A SSISAIAEDLQRTVVQSKDSAIRSARS Q+ASSSHIRS QD
Sbjct: 1   MGAGEEHQPEPTLENVTAPSSISAIAEDLQRTVVQSKDSAIRSARSFQQASSSHIRSLQD 60

Query: 61  FVPRAASQFKTHEDAFFSKVKDEFKIAREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGR 120
           FVP+A SQFKT+ED FF K+ DE KIAREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGR
Sbjct: 61  FVPQATSQFKTYEDTFFRKLTDELKIAREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGR 120

Query: 121 FQSEEANFLKAEKHVKELNLSVDLMKKESKKLLERAALAEKDMKYGHNELMNAGSQIQHL 180
           FQ+EEA+FLKAEKHVKELNLSVDLMK ESKKLLERAALAEKDMKYGHNELMNAGSQIQ L
Sbjct: 121 FQTEEASFLKAEKHVKELNLSVDLMKNESKKLLERAALAEKDMKYGHNELMNAGSQIQRL 180

Query: 181 SRSIYKAEAQAA 193
           SRSIYKAEAQAA
Sbjct: 181 SRSIYKAEAQAA 192

[Close]

BLAST of Lsi06G003800 vs. NCBI nr
Match: gi|255564796|ref|XP_002523392.1| (PREDICTED: uncharacterized protein LOC8282150 [Ricinus communis])

HSP 1 Score: 243.4 bits (620), Expect = 3.8e-61
Identity = 125/167 (74.85%), Postives = 145/167 (86.83%), Query Frame = 1


Query: 27  EDLQRTVVQSKDSAIRSARSLQEASSSHIRSFQDFVPRAASQFKTHEDAFFSKVKDEFKI 86
           EDLQRTV++SKDSAIRSARSL + SSS +RS QD VP+A S F+T+ED+FF+K+K+E  I
Sbjct: 51  EDLQRTVIESKDSAIRSARSLHQNSSSRLRSLQDHVPQALSLFRTYEDSFFNKIKEELMI 110

Query: 87  AREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGRFQSEEANFLKAEKHVKELNLSVDLMK 146
           AREHP   +GVAVTAG L+MRGPRRFLFRHT GRFQSEEA FLK EK+VKELNLSVDLMK
Sbjct: 111 AREHPVEVVGVAVTAGFLLMRGPRRFLFRHTFGRFQSEEARFLKTEKNVKELNLSVDLMK 170

Query: 147 KESKKLLERAALAEKDMKYGHNELMNAGSQIQHLSRSIYKAEAQAAG 194
            ES+KLLERA+LAEKDMK+GH ELM+AGSQIQ L++SIYK E Q AG
Sbjct: 171 NESRKLLERASLAEKDMKHGHTELMDAGSQIQRLAKSIYKVETQVAG 217

[Close]

BLAST of Lsi06G003800 vs. NCBI nr
Match: gi|731393298|ref|XP_010651409.1| (PREDICTED: uncharacterized protein LOC100250144 isoform X1 [Vitis vinifera])

HSP 1 Score: 231.5 bits (589), Expect = 1.5e-57
Identity = 119/169 (70.41%), Postives = 143/169 (84.62%), Query Frame = 1


Query: 24  AIAEDLQRTVVQSKDSAIRSARSLQEASSSHIRSFQDFVPRAASQFKTHEDAFFSKVKDE 83
           + AEDLQRTV +S DSAIRSA SLQ+ SSSH+RS Q+F+P+  SQ++T+EDAFF KVKDE
Sbjct: 29  SFAEDLQRTVSESADSAIRSALSLQQNSSSHLRSLQEFIPQMESQYRTYEDAFFKKVKDE 88

Query: 84  FKIAREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGRFQSEEANFLKAEKHVKELNLSVD 143
              A+EHP     VAVTAGL+ +RGPRRFLF HTLGRFQSEEA F++AEK+VKELNLSVD
Sbjct: 89  LTSAKEHPVVVGAVAVTAGLIFLRGPRRFLFHHTLGRFQSEEAQFVRAEKNVKELNLSVD 148

Query: 144 LMKKESKKLLERAALAEKDMKYGHNELMNAGSQIQHLSRSIYKAEAQAA 193
           LMK ES+KLLERAALAEKDMK GH ELMN GSQ++ L+++++K EAQAA
Sbjct: 149 LMKNESRKLLERAALAEKDMKCGHTELMNTGSQLKRLAKTVFKVEAQAA 197

[Close]

BLAST of Lsi06G003800 vs. NCBI nr
Match: gi|225435822|ref|XP_002285769.1| (PREDICTED: uncharacterized protein LOC100250144 isoform X2 [Vitis vinifera])

HSP 1 Score: 231.5 bits (589), Expect = 1.5e-57
Identity = 119/169 (70.41%), Postives = 143/169 (84.62%), Query Frame = 1


Query: 24  AIAEDLQRTVVQSKDSAIRSARSLQEASSSHIRSFQDFVPRAASQFKTHEDAFFSKVKDE 83
           + AEDLQRTV +S DSAIRSA SLQ+ SSSH+RS Q+F+P+  SQ++T+EDAFF KVKDE
Sbjct: 29  SFAEDLQRTVSESADSAIRSALSLQQNSSSHLRSLQEFIPQMESQYRTYEDAFFKKVKDE 88

Query: 84  FKIAREHPAATIGVAVTAGLLIMRGPRRFLFRHTLGRFQSEEANFLKAEKHVKELNLSVD 143
              A+EHP     VAVTAGL+ +RGPRRFLF HTLGRFQSEEA F++AEK+VKELNLSVD
Sbjct: 89  LTSAKEHPVVVGAVAVTAGLIFLRGPRRFLFHHTLGRFQSEEAQFVRAEKNVKELNLSVD 148

Query: 144 LMKKESKKLLERAALAEKDMKYGHNELMNAGSQIQHLSRSIYKAEAQAA 193
           LMK ES+KLLERAALAEKDMK GH ELMN GSQ++ L+++++K EAQAA
Sbjct: 149 LMKNESRKLLERAALAEKDMKCGHTELMNTGSQLKRLAKTVFKVEAQAA 197

The following BLAST results are available for this feature:

BLAST of Lsi06G003800 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi06G003800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZ64_CUCSA	3.1e-86	90.63	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599380 PE=4 SV=1	[more]
B9SBM3_RICCO	2.6e-61	74.85	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0342690 PE=4 SV=1	[more]
D7SLP2_VITVI	1.0e-57	70.41	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0004g00100 PE=4 SV=...	[more]
A0A061GSY8_THECC	3.9e-57	71.69	Uncharacterized protein OS=Theobroma cacao GN=TCM_039966 PE=4 SV=1	[more]
D7MF99_ARALL	4.4e-56	69.28	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]

BLAST of Lsi06G003800 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G26410.1	6.4e-59	70.30	Uncharacterised conserved protein UCP022280	[more]
AT2G45060.1	1.7e-19	34.52	Uncharacterised conserved protein UCP022280	[more]

BLAST of Lsi06G003800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659100233\|ref\|XP_008450994.1\|	1.2e-88	93.23	PREDICTED: uncharacterized protein LOC103492410 [Cucumis melo]	[more]
gi\|449452634\|ref\|XP_004144064.1\|	4.4e-86	90.63	PREDICTED: uncharacterized protein LOC101216418 [Cucumis sativus]	[more]
gi\|255564796\|ref\|XP_002523392.1\|	3.8e-61	74.85	PREDICTED: uncharacterized protein LOC8282150 [Ricinus communis]	[more]
gi\|731393298\|ref\|XP_010651409.1\|	1.5e-57	70.41	PREDICTED: uncharacterized protein LOC100250144 isoform X1 [Vitis vinifera]	[more]
gi\|225435822\|ref\|XP_002285769.1\|	1.5e-57	70.41	PREDICTED: uncharacterized protein LOC100250144 isoform X2 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0071333	cellular response to glucose stimulus
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G003800.1	Lsi06G003800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 135..162 scor
None	No IPR available	PANTHER	PTHR34554	FAMILY NOT NAMED	coord: 25..193 score: 1.4
None	No IPR available	PANTHER	PTHR34554:SF2	SUBFAMILY NOT NAMED	coord: 25..193 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi06G003800	Csa1G599380	Cucumber (Chinese Long) v2	culsiB058
Lsi06G003800	CSPI01G29130	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G003800	Cucsa.142170	Cucumber (Gy14) v1	cgylsiB230
Lsi06G003800	CmaCh10G008040	Cucurbita maxima (Rimu)	cmalsiB063
Lsi06G003800	CmoCh10G008310	Cucurbita moschata (Rifu)	cmolsiB050
Lsi06G003800	Cla011120	Watermelon (97103) v1	lsiwmB396
Lsi06G003800	MELO3C015562	Melon (DHL92) v3.5.1	lsimeB396
Lsi06G003800	ClCG03G014660	Watermelon (Charleston Gray)	lsiwcgB364
Lsi06G003800	MELO3C015562.2	Melon (DHL92) v3.6.1	lsimedB418
Lsi06G003800	Cla97C03G064890	Watermelon (97103) v2	lsiwmbB365
Lsi06G003800	Bhi02G001466	Wax gourd	lsiwgoB517
Lsi06G003800	Cp4.1LG18g02830	Cucurbita pepo (Zucchini)	cpelsiB305
Lsi06G003800	CsGy1G028350	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G003800	Carg12921	Silver-seed gourd	carlsiB086
Lsi06G003800	CsaV3_1G041510	Cucumber (Chinese Long) v3	cuclsiB068

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G003800	Silver-seed gourd	carlsiB452
Lsi06G003800	Cucurbita maxima (Rimu)	cmalsiB128
Lsi06G003800	Cucurbita moschata (Rifu)	cmolsiB118
Lsi06G003800	Cucurbita pepo (Zucchini)	cpelsiB563