Lsi06G003670 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi06G003670
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Pectinesterase
Location	chr06 : 4037403 .. 4041812 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGCCCAAAAAATACGACACACAAGGAGATTTTTGGGAGAATGTCTCGGCCGACCGTTGCTTCATCTTTTCCGGCGACGGTGGCGGTCGCATTGGCGGTGGTCCAACTCATCATCCTAATACTTCCGTCCGCCGTCGTCGAAGCTCGCACGAAGACGATTCCGGCAGATTCATCGAAGCTCGATGAATGGATCGCACACAATATGAGAGAATACAACGATCGTAAGGCGAACGAGACAGGTCTCAAGGCGCTGGACCGACGGCTGGCAAAGGCGGAGGACCACGTTCGACTAATCACCGTTAGAAAAGACGGACGAGGAAATTTCACGACGATCACAGAAGCGATCGAGAGCATTCCGTCTGGAAATCGGCGGCGAGTTGTGGTGTGGATCGGCGGCGGAGTTTACAGAGAGAAGATCACGATCGAAGCTTCGAAGCCGTTCGTGACGTTGTATGGTCAGAAAGGAAAACGGCCGGTGATAACGTTCGACGGTACGGCATCGGAATTTGGTACCGTTAAGAGCGCGACGGTGGCGGTGGAATCGGATTATTTCGTTGCCGTCAATCTTGCGTTTGTGGTGCGTTTCTTCTTCTTCTTCTTTTCATTTTTGTGGGGTAAGTTTTGTAAATAGTAATAATTATGGGGCTATAAGTTTTGGCAACGTATGATGTGCATGAGTTTTATTGTTTTTTATTTTTATGAAAAAAAGAAAAAAAAATTCATGCATTCACTCGTCATATACTCATGCCATTCCTCATGTGTACAAAACATGATTTTTCACGTTGAAATCTTGACTTTTTCATGCACGATTGGTTAGTACTTTTTCTTTTTTCTTATACATATGAAAAAAATTAGTTTGAAACTATTTACAAATATAGAAAAATTTTACAATCTAACAGTAATAAATCGTGATAGAATTCTACCACTTGAGCGCGATAGAATTCTATCACTGTCTATCGTTGATAGACAATAAAATTTTTCTATATTTGTAAATAATTTGGCTATTTTTCTATATTGGAAAACCCAAAAAATCATTTAACGAATATTAGATGATATATAATTAAATTTACCTTTACCCATTAACTTAAGCTTTTGAATCAATCAGTAATTTAAGACCTTATAATATGTTTAGTGTGAATTAAAAAATTTGTATATCTCAAATAACTACGAGATATAAAGTGATGAGTTGGTAAGGAATTTTATACATATTATTGTGCCAGATCTTTATTCTCGTTTAGTAATAATTTTGTTGTTATTTATTTTTTGAAATTTATAATTGTTTTCTTCCAGTTTTTAACTAAAATTTTCACATTTCTTAAAGAAACACTTTTATAGTCAGATACTATAAATAAATTCTATTGTTTGAAAACTATTTTTTTTTAATTCGAATTTTGGCTAGAAAGGATAGCAAAACATAGAAACTTTTAGGTAAAAATAGTATTTTTAAGTTTAATTTTGGTTAAATTACAAATTTGGTTAATTCCAATGGTTTGGAAAAAGTTTAGAATTTAGTCCTTATAGTTTTAAAAGTTAAAGTTTAATTAGTCCATATATGTTGATAAAACCTCATAATTAAGTAGTCCCCTGGTTTGATAAAATCCTCCTAAATTCCTATGAGAATTTTATCAAATCATAGAGATTAAATTCTAATTATAAAGTATCGGGATTAAATTTTAACTTTCTTTCACCAAACCATAAAAAACCATTTTTTTTAAAAAAAAATACAATAGGGGATAGCAATCCTAACATGTTTACTTGTGATGACCTCTTAAACAAAGAAGAGAAAGGAATTGAAATTAAAGTTGGCTTCATTCCATTTAAAAGCAGGCAATGAGTTTGGTGTAACATTTTTAGTATATGGTAAAGTACTTCATTTCTTAGAATTGGAAAAAGTTGATATGTATAAAAGAGGCAAACTAAAGGAATTTATATATTGACAAATAACACCATGAGAGAAGTAACTCGTGTATCTTATAAATGTCTTGTTAAGATATTGTCTCTTTAGAGCTCACCATTCTTGAGTTGCATCCTCCTTTTTTTAGGTCAAAAACCCGTTTGGACTTCTTGGACTTTAATACCATATTAGATAAACACGAGGTTCCATCTTAAAAGCATCTGACAATAGGAAAAGTAATCTATATATATCTTATAAAAATTTGAGATCTCTTCAACATTTTAATGTGGAATTCTCAACCATGATTACTCATTAATAAATTAGTTTATATTTGATTAAGAAGTGAAGTTTGGTTGTTAAATTTGTTGTGCAGAATTCAGCTCCAATGCCTGACTTAGGAGGAACAGGAGGGCAAGCAGTGGCAATGAGGATATCTGGGGATAAAGCAGCATTCCACGAGTGTCATTTCATAGGCTTTCAAGATACTTTATGCGATGACAGAGGCAGACATTTTTTCAAGGACTGTTACATCCAAGGCACTGTGGATTTCATCTTTGGAAATGGCAAATCTCTCTATTTGGTATGATACATCCTTTATACTTTAAAATGTTCGTAAACTTACCTAACATGATACTTAGCGATCAGCTAATAGAAATTCAGATCAGCAATTAAGTCAATTTTAGGAGAAGAAAATATCCAAATTGGTAGGAATGGTGCGTTTCACGATAATTTAGTCGATAGTTTCCATCGTTGGATGTATGGAAAAGAAGTACTTCAAAGTTATATCCAATAGTTATTAAGAGATATGTATGTTTTTGAATCTACGTCTAACGATTGTGTGACAGTCTCATTGAATAATTTCTACTCCTTGATGAGTCATGAGGTGACAAGTTTCATCCTACGAAAAATGATATGATGATGTCTAAATATTAAAGACTAAAACGTATATGACGACAGGTTCAATTGGACATATAAGAAAGAAGTACCTTGGATTTACATCTAATAGTTATTAATGGGTATGCATGTTTCTGAATCTACGTCTAACGATTGTGTAGCGTCACATCCACATTGATTAATTCCTCCTTCTTGATAAGTCAGGAGGGCGACAAGTTTTGTCGTACGAAAAATGATATGACGATATCTAAACATTAAAGACTAAAACATATATTTAGTATATCTATTTCTGTCTCTCTTTCAAAGAGAAAGGTAATAGGCAATGATCATTTCATCTATACAGAAAACCACAATAAAATCAGTTGCAGAAGGGACAGGTGTGATAACAGCTCAAGCAAGGGAAGAAGCCACAGATGACAGTGGTTTCACATTTGCATATTGCAACATCACAGGAACAGGAAACACTTATTTGGGAAGAGCTTGGAAAGAGAGAACTCGTGTAGTTTTTGCTTACACATATATGGGAACTCTCATTAACACAGAAGGATGGTCTGACAAAATGCACGGAAGCCAACCTAGAAAGTAAGCAAAAAAATCACACCTGATATCTTTATACAATTAAGATATGTATTCTAACGAGTCGACTAATTATCATCTTAATTTTCGAATGTATGTGAACACAGGAGTATGTACTACGGCGAGTACAAATGCATGGGACCTGGGGCAACCCCTTCGGGTCGAGTGAAGTATGCTAGAATACTCTCGGACGAAGAAGCGAAAGCGTTTTTGAGTATGACTTATATCCATGGAAACAAATGGCTTCTACCACCCCCAGATCTTTCCCTCTCCCATTCTCAACCCAATTTCTTCCATTAAAATTGAATGAAATGCTGCATTTTATGCTTTATCAAAAAGGAAGTTAATACTATATATCCCAGAATGTGGCCATAAAACCATGAAAGTAACTAATAGCGATAATTAGAAAAAGCAGGGCCTAGAACTTTATCCCATATATTTCCCCATTTAAATGTCTGTCACATAGAAATAATCCCATTTTTTTTGGTCCAAAGTTTTAGTTGATTGTTGTACCAAACTGATCAACTTTTTTTATTTTTATTTTTATTTTTTATTTTTATTTTTTTGCTGACTCTCATAATCTCTCCTATGTTATGGTCGTTTTTGCAAGGGAAAAGTACATGATCATGCAATGTTGTTGTTTATGAGATTGTGTAGCTATTTTTCTTCCAACACTAATAATTGTGTATGGTGAAATTTTGAGATACAAAACCTACTCTAAATGTGTTTGGTATCAAAGCTTTACTAGAAATGGTCTCTTTTAAAAGCTTCTATTATCTTTTCTTTATCATTTGAACAATCCCTATTCTTTGCCACATCTGGCTGGAGTGGAACAATCGAACCTTCAACAACTACAGGAATTGTTCTATTGATAGTACTTGCTTGAACGTTCGTCCTTTCTGCGACTACTTGGCCTACAAAATTTTTTCTTTTTGTTAATTATCCTTATTCTTGTATTGCCTTAAACTGGCACATGTTCAATGTAACTCCTCTTGTTTCGTATGTACTTTATACATACAGGCTCCTTTGTAAAGTATCTTCTTTT

mRNA sequence

CAAGCCCAAAAAATACGACACACAAGGAGATTTTTGGGAGAATGTCTCGGCCGACCGTTGCTTCATCTTTTCCGGCGACGGTGGCGGTCGCATTGGCGGTGGTCCAACTCATCATCCTAATACTTCCGTCCGCCGTCGTCGAAGCTCGCACGAAGACGATTCCGGCAGATTCATCGAAGCTCGATGAATGGATCGCACACAATATGAGAGAATACAACGATCGTAAGGCGAACGAGACAGGTCTCAAGGCGCTGGACCGACGGCTGGCAAAGGCGGAGGACCACGTTCGACTAATCACCGTTAGAAAAGACGGACGAGGAAATTTCACGACGATCACAGAAGCGATCGAGAGCATTCCGTCTGGAAATCGGCGGCGAGTTGTGGTGTGGATCGGCGGCGGAGTTTACAGAGAGAAGATCACGATCGAAGCTTCGAAGCCGTTCGTGACGTTGTATGGTCAGAAAGGAAAACGGCCGGTGATAACGTTCGACGGTACGGCATCGGAATTTGGTACCGTTAAGAGCGCGACGGTGGCGGTGGAATCGGATTATTTCGTTGCCGTCAATCTTGCGTTTGTGAATTCAGCTCCAATGCCTGACTTAGGAGGAACAGGAGGGCAAGCAGTGGCAATGAGGATATCTGGGGATAAAGCAGCATTCCACGAGTGTCATTTCATAGGCTTTCAAGATACTTTATGCGATGACAGAGGCAGACATTTTTTCAAGGACTGTTACATCCAAGGCACTGTGGATTTCATCTTTGGAAATGGCAAATCTCTCTATTTGAAAACCACAATAAAATCAGTTGCAGAAGGGACAGGTGTGATAACAGCTCAAGCAAGGGAAGAAGCCACAGATGACAGTGGTTTCACATTTGCATATTGCAACATCACAGGAACAGGAAACACTTATTTGGGAAGAGCTTGGAAAGAGAGAACTCGTGTAGTTTTTGCTTACACATATATGGGAACTCTCATTAACACAGAAGGATGGTCTGACAAAATGCACGGAAGCCAACCTAGAAAGAGTATGTACTACGGCGAGTACAAATGCATGGGACCTGGGGCAACCCCTTCGGGTCGAGTGAAGTATGCTAGAATACTCTCGGACGAAGAAGCGAAAGCGTTTTTGAGTATGACTTATATCCATGGAAACAAATGGCTTCTACCACCCCCAGATCTTTCCCTCTCCCATTCTCAACCCAATTTCTTCCATTAAAATTGAATGAAATGCTGCATTTTATGCTTTATCAAAAAGGAAGTTAATACTATATATCCCAGAATGTGGCCATAAAACCATGAAAGTAACTAATAGCGATAATTAGAAAAAGCAGGGCCTAGAACTTTATCCCATATATTTCCCCATTTAAATGTCTGTCACATAGAAATAATCCCATTTTTTTTGGTCCAAAGTTTTAGTTGATTGTTGTACCAAACTGATCAACTTTTTTTATTTTTATTTTTATTTTTTATTTTTATTTTTTTGCTGACTCTCATAATCTCTCCTATGTTATGGTCGTTTTTGCAAGGGAAAAGTACATGATCATGCAATGTTGTTGTTTATGAGATTGTGTAGCTATTTTTCTTCCAACACTAATAATTGTGTATGGTGAAATTTTGAGATACAAAACCTACTCTAAATGTGTTTGGTATCAAAGCTTTACTAGAAATGGTCTCTTTTAAAAGCTTCTATTATCTTTTCTTTATCATTTGAACAATCCCTATTCTTTGCCACATCTGGCTGGAGTGGAACAATCGAACCTTCAACAACTACAGGAATTGTTCTATTGATAGTACTTGCTTGAACGTTCGTCCTTTCTGCGACTACTTGGCCTACAAAATTTTTTCTTTTTGTTAATTATCCTTATTCTTGTATTGCCTTAAACTGGCACATGTTCAATGTAACTCCTCTTGTTTCGTATGTACTTTATACATACAGGCTCCTTTGTAAAGTATCTTCTTTT

Coding sequence (CDS)

ATGTCTCGGCCGACCGTTGCTTCATCTTTTCCGGCGACGGTGGCGGTCGCATTGGCGGTGGTCCAACTCATCATCCTAATACTTCCGTCCGCCGTCGTCGAAGCTCGCACGAAGACGATTCCGGCAGATTCATCGAAGCTCGATGAATGGATCGCACACAATATGAGAGAATACAACGATCGTAAGGCGAACGAGACAGGTCTCAAGGCGCTGGACCGACGGCTGGCAAAGGCGGAGGACCACGTTCGACTAATCACCGTTAGAAAAGACGGACGAGGAAATTTCACGACGATCACAGAAGCGATCGAGAGCATTCCGTCTGGAAATCGGCGGCGAGTTGTGGTGTGGATCGGCGGCGGAGTTTACAGAGAGAAGATCACGATCGAAGCTTCGAAGCCGTTCGTGACGTTGTATGGTCAGAAAGGAAAACGGCCGGTGATAACGTTCGACGGTACGGCATCGGAATTTGGTACCGTTAAGAGCGCGACGGTGGCGGTGGAATCGGATTATTTCGTTGCCGTCAATCTTGCGTTTGTGAATTCAGCTCCAATGCCTGACTTAGGAGGAACAGGAGGGCAAGCAGTGGCAATGAGGATATCTGGGGATAAAGCAGCATTCCACGAGTGTCATTTCATAGGCTTTCAAGATACTTTATGCGATGACAGAGGCAGACATTTTTTCAAGGACTGTTACATCCAAGGCACTGTGGATTTCATCTTTGGAAATGGCAAATCTCTCTATTTGAAAACCACAATAAAATCAGTTGCAGAAGGGACAGGTGTGATAACAGCTCAAGCAAGGGAAGAAGCCACAGATGACAGTGGTTTCACATTTGCATATTGCAACATCACAGGAACAGGAAACACTTATTTGGGAAGAGCTTGGAAAGAGAGAACTCGTGTAGTTTTTGCTTACACATATATGGGAACTCTCATTAACACAGAAGGATGGTCTGACAAAATGCACGGAAGCCAACCTAGAAAGAGTATGTACTACGGCGAGTACAAATGCATGGGACCTGGGGCAACCCCTTCGGGTCGAGTGAAGTATGCTAGAATACTCTCGGACGAAGAAGCGAAAGCGTTTTTGAGTATGACTTATATCCATGGAAACAAATGGCTTCTACCACCCCCAGATCTTTCCCTCTCCCATTCTCAACCCAATTTCTTCCATTAA

Protein sequence

MSRPTVASSFPATVAVALAVVQLIILILPSAVVEARTKTIPADSSKLDEWIAHNMREYNDRKANETGLKALDRRLAKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEASKPFVTLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGTGGQAVAMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKTTIKSVAEGTGVITAQAREEATDDSGFTFAYCNITGTGNTYLGRAWKERTRVVFAYTYMGTLINTEGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHGNKWLLPPPDLSLSHSQPNFFH

Homology

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BLAST of Lsi06G003670 vs. Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2)

HSP 1 Score: 353.2 bits (905), Expect = 3.6e-96
Identity = 164/293 (55.97%), Postives = 217/293 (74.06%), Query Frame = 1


Query: 87  VRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEASKPFVTLYGQKGKRPV 146
           V+++GRG+F TITEAI S+ +GN RRV++ IG GVY+EK+TI+ SKPF+TLYG     PV
Sbjct: 45  VKQNGRGHFKTITEAINSVRAGNTRRVIIKIGPGVYKEKVTIDRSKPFITLYGHPNAMPV 104

Query: 147 ITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGTGGQAVAMRISGDKAAF 206
           +TFDGTA+++GTV SAT+ V SDYF+AVN+   NSAPMPD    G QA++MRISG+KAAF
Sbjct: 105 LTFDGTAAQYGTVDSATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAF 164

Query: 207 HECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKTTIKSVAEGTGVITAQA 266
           + C F G+QDT+CDD G HFFKDCYI+GT DFIFG+G+SLYL T +  V +G  VITA A
Sbjct: 165 YNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNVVGDGIRVITAHA 224

Query: 267 REEATDDSGFTFAYCNITGTG-NTYLGRAWKERTRVVFAYTYMGTLINTEGWSDKMHGSQ 326
            + A + SG++F +C +TGTG   YLGR+W    +VV+AYT M +++N  GW +     +
Sbjct: 225 GKSAAEKSGYSFVHCKVTGTGTGIYLGRSWMSHPKVVYAYTDMSSVVNPSGWQENREAGR 284

Query: 327 PRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHGNKWLLPPP 379
             K+++YGEYKC G G+    RVKY + + D EAK F+S+ YI G+ WLLPPP
Sbjct: 285 D-KTVFYGEYKCTGTGSHKEKRVKYTQDIDDIEAKYFISLGYIQGSSWLLPPP 336

[Close]

BLAST of Lsi06G003670 vs. Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 4.7e-96
Identity = 170/364 (46.70%), Postives = 246/364 (67.58%), Query Frame = 1


Query: 16  VALAVVQLIILILPSAVVEARTKTIPADSSKLDEWIAHNMREYNDRKANETGLKALDRRL 75
           ++++VV  +++     V+   T  IP + +++ +W   N++ Y+ RK        LD  L
Sbjct: 4   ISMSVVAFLVVFASPVVLATDTDPIPENRAQIPQWFKTNVKPYSQRKGT------LDPAL 63

Query: 76  AKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEASKPFV 135
             AE   ++ITV + G  NF T+ EAI+SIP+GN+ RV++ +  GVY EK+TI+ ++PF+
Sbjct: 64  EAAEAARQIITVNQKGGANFKTLNEAIKSIPTGNKNRVIIKLAPGVYNEKVTIDIARPFI 123

Query: 136 TLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGTGGQAV 195
           TL GQ G   V+T+ GTA+++GTV+SAT+ V ++YF A +L   N+APMP   G+ GQA+
Sbjct: 124 TLLGQPGAETVLTYHGTAAQYGTVESATLIVWAEYFQAAHLTIKNTAPMPK-PGSQGQAL 183

Query: 196 AMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKTTIKSV 255
           AMRI+ DKAAF+ C F GFQDTLCDD+G HFFKDCYI+GT DFIFG G SLYL T + +V
Sbjct: 184 AMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHAV 243

Query: 256 AEGTGVITAQAREEATDDSGFTFAYCNITGTG-NTYLGRAWKERTRVVFAYTYMGTLINT 315
            +G  VITAQ R+ AT+ +G+TF +C +TGTG   YLGR+W    +VV+A+T M +++N 
Sbjct: 244 GDGLRVITAQGRQSATEQNGYTFVHCKVTGTGTGIYLGRSWMSHPKVVYAFTEMTSVVNP 303

Query: 316 EGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHGNKWL 375
            GW + ++     K+++YGEYKC GPG+    RV Y + +   E   FL++ YI G+ WL
Sbjct: 304 SGWRENLNRGYD-KTVFYGEYKCFGPGSHLEKRVPYTQDIDKNEVTPFLTLGYIKGSTWL 359

Query: 376 LPPP 379
           LPPP
Sbjct: 364 LPPP 359

[Close]

BLAST of Lsi06G003670 vs. Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2)

HSP 1 Score: 337.0 bits (863), Expect = 2.7e-91
Identity = 170/366 (46.45%), Postives = 240/366 (65.57%), Query Frame = 1


Query: 16  VALAVVQLIILILPSAVVEARTKTIPADSSKLDEWIAHNMREYNDRKANETGLKALDRRL 75
           V++ +  L+I + P    +  T  IP    ++ +W   ++     RK        LD  L
Sbjct: 6   VSILLGMLVIFVSPMVFADDLTP-IPEGKPQVVQWFNTHVGPLAQRKG-------LDPAL 65

Query: 76  AKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEASKPFV 135
             AE   R+I V   G G F T+T+AI+S+P+GN +RV++ +  G YREK+TI+ +KPF+
Sbjct: 66  VAAEAAPRIINVNPKG-GEFKTLTDAIKSVPAGNTKRVIIKMAHGEYREKVTIDRNKPFI 125

Query: 136 TLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGTGGQAV 195
           TL GQ    PVIT+DGTA+++GTV SA++ + SDYF+AVN+   N+AP PD    G QA+
Sbjct: 126 TLMGQPNAMPVITYDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQAL 185

Query: 196 AMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKTTIKSV 255
           +MRISG+ AAF+ C F GFQDT+CDD G HFFKDCY++GT DFIFG+G S+YL T +  V
Sbjct: 186 SMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVV 245

Query: 256 AEGTGVITAQAREEATDDSGFTFAYCNITGT-GNTYLGRAWKERTRVVFAYTYMGTLINT 315
            +G  VI A A + A + SG++F +C +TGT G  YLGRAW    +VV+AYT M +++N 
Sbjct: 246 GDGIRVIAAHAGKSAEEKSGYSFVHCKVTGTGGGIYLGRAWMSHPKVVYAYTEMTSVVNP 305

Query: 316 EGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHGNKWL 375
            GW +    +   K+++YGEYKC GPG+  + RV + + + D+EA  FLS+ YI G+KWL
Sbjct: 306 TGWQENKTPAHD-KTVFYGEYKCSGPGSHKAKRVPFTQDIDDKEANCFLSLGYIQGSKWL 361

Query: 376 LPPPDL 381
           LPPP L
Sbjct: 366 LPPPAL 361

[Close]

BLAST of Lsi06G003670 vs. Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 2.7e-91
Identity = 163/364 (44.78%), Postives = 242/364 (66.48%), Query Frame = 1


Query: 16  VALAVVQLIILILPSAVVEARTKTIPADSSKLDEWIAHNMREYNDRKANETGLKALDRRL 75
           ++LA+V L++      V+      IPAD +++ +W   N++ ++ R+        LD  L
Sbjct: 4   ISLALVALLVFFASPVVLADDITPIPADRAQIPQWFMANVKPFSQRRGT------LDPEL 63

Query: 76  AKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEASKPFV 135
             AE   R+I V ++G G+F TI  AI+SIP  N+ RV++ +  G+Y EK+T++  +P+V
Sbjct: 64  EAAEASRRVIIVNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPGIYHEKVTVDVGRPYV 123

Query: 136 TLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGTGGQAV 195
           TL G+ G    +T+ GTA+++GTV+SAT+ V +  F+A NL  +N++PMP   GT GQA+
Sbjct: 124 TLLGKPGAETNLTYAGTAAKYGTVESATLIVWATNFLAANLNIINTSPMPK-PGTQGQAL 183

Query: 196 AMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKTTIKSV 255
           AMRI+GDKAAF+ C F GFQDTLCDDRG HFFK+CYI+GT DFIFG G SLYL T + +V
Sbjct: 184 AMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQLHAV 243

Query: 256 AEGTGVITAQAREEATDDSGFTFAYCNITGTG-NTYLGRAWKERTRVVFAYTYMGTLINT 315
            +G  VI A  R+  T+ +G++F +C +TG G   YLGRAW    +VV++YT M +++N 
Sbjct: 244 GDGLRVIAAHNRQSTTEQNGYSFVHCKVTGVGTGIYLGRAWMSHPKVVYSYTEMSSVVNP 303

Query: 316 EGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHGNKWL 375
            GW +    +   K+++YGEY C GPG+  + RV + + + ++EA  FL++ YI G+KWL
Sbjct: 304 SGWQENRVRAHD-KTVFYGEYMCTGPGSHKAKRVAHTQDIDNKEASQFLTLGYIKGSKWL 359

Query: 376 LPPP 379
           LPPP
Sbjct: 364 LPPP 359

[Close]

BLAST of Lsi06G003670 vs. Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 6.0e-91
Identity = 169/366 (46.17%), Postives = 240/366 (65.57%), Query Frame = 1


Query: 16  VALAVVQLIILILPSAVVEARTKTIPADSSKLDEWIAHNMREYNDRKANETGLKALDRRL 75
           V++ +  L++ + P    +  T  IP    ++ +W   N+     RK        LD  L
Sbjct: 6   VSILLGLLMVFVTPMVFADDVTP-IPEGKPQVAQWFNANVGPLAQRKG-------LDPAL 65

Query: 76  AKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEASKPFV 135
             AE   R+I V   G G F T+T+AI+S+P+GN +RV++ +  G Y+EK+TI+ +KPF+
Sbjct: 66  VAAEAAPRIINVNPKG-GEFKTLTDAIKSVPAGNTKRVIIKMAPGEYKEKVTIDRNKPFI 125

Query: 136 TLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGTGGQAV 195
           TL GQ    PVIT+DGTA+++GTV SA++ + SDYF+AVN+   N+AP PD    G QA+
Sbjct: 126 TLMGQPNAMPVITYDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQAL 185

Query: 196 AMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKTTIKSV 255
           +MRISG+ AAF+ C F GFQDT+CDD G HFFKDCY++GT DFIFG+G S+YL T +  V
Sbjct: 186 SMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVV 245

Query: 256 AEGTGVITAQAREEATDDSGFTFAYCNITGT-GNTYLGRAWKERTRVVFAYTYMGTLINT 315
            +G  VI A A + A + SG++F +C +TGT G  YLGRAW    +VV+AYT M +++N 
Sbjct: 246 GDGIRVIAAHAGKSAEEKSGYSFVHCKVTGTGGGIYLGRAWMSHPKVVYAYTEMTSVVNP 305

Query: 316 EGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHGNKWL 375
            GW +    +   K+++YGEYKC GPG+  + RV + + + D+EA  FLS+ YI G+KWL
Sbjct: 306 TGWQENKTPAHD-KTVFYGEYKCSGPGSHKAKRVPFTQDIDDKEANRFLSLGYIQGSKWL 361

Query: 376 LPPPDL 381
           LPPP L
Sbjct: 366 LPPPAL 361

[Close]

BLAST of Lsi06G003670 vs. TrEMBL
Match: A0A0A0M299_CUCSA (Pectinesterase OS=Cucumis sativus GN=Csa_1G597780 PE=4 SV=1)

HSP 1 Score: 719.5 bits (1856), Expect = 2.1e-204
Identity = 359/394 (91.12%), Postives = 376/394 (95.43%), Query Frame = 1


Query: 1   MSRPTVASSFPATVAVALAVV-QLIILIL-PSA-VVEARTKTIPADSSKLDEWIAHNMRE 60
           M RPTVASSFPATVA A+ V+ QLIILI+ PS  VVEA TKTIPADSSKLDEWI HNM+E
Sbjct: 1   MFRPTVASSFPATVAFAMGVMLQLIILIIIPSTVVVEAHTKTIPADSSKLDEWIGHNMKE 60

Query: 61  YNDRKANETGLKALDRRLAKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWI 120
           YNDRK NETG+KALDRRLA+AED V+LITVRKDGRGNF+TITEAI+SIPSGNRRRVVVWI
Sbjct: 61  YNDRKTNETGIKALDRRLAEAEDCVQLITVRKDGRGNFSTITEAIDSIPSGNRRRVVVWI 120

Query: 121 GGGVYREKITIEASKPFVTLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLA 180
           GGGVYREKITI+ASKPFVTLYGQKGKRP+ITFDGTASEFGTVKSATVAVESDYFVAVNL 
Sbjct: 121 GGGVYREKITIDASKPFVTLYGQKGKRPMITFDGTASEFGTVKSATVAVESDYFVAVNLT 180

Query: 181 FVNSAPMPDLGGTGGQAVAMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVD 240
           FVNSAPMP+LGGTGGQAVAMRISGDKAAFH CHFIGFQDTLCDDRGRHFFKDCY+QGTVD
Sbjct: 181 FVNSAPMPELGGTGGQAVAMRISGDKAAFHGCHFIGFQDTLCDDRGRHFFKDCYVQGTVD 240

Query: 241 FIFGNGKSLYLKTTIKSVAEGTGVITAQAREEATDDSGFTFAYCNITGTGNTYLGRAWKE 300
           FIFGNGKSLYLKTTI SVAEGTGVITAQARE+ATD+SGFTFAYCNITGTG+TYLGRAWKE
Sbjct: 241 FIFGNGKSLYLKTTINSVAEGTGVITAQAREDATDESGFTFAYCNITGTGDTYLGRAWKE 300

Query: 301 RTRVVFAYTYMGTLINTEGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDE 360
           RTRVVFAYTYMGTLINTEGWSDKMHGSQPRKSMYYGEYKC GPGATPSGRVKYARILSD 
Sbjct: 301 RTRVVFAYTYMGTLINTEGWSDKMHGSQPRKSMYYGEYKCKGPGATPSGRVKYARILSDV 360

Query: 361 EAKAFLSMTYIHGNKWLLPPPDLSLSHSQPNFFH 392
           EAKAFLSMTYIHGNKWLLPPPDLSLS S+PN FH
Sbjct: 361 EAKAFLSMTYIHGNKWLLPPPDLSLSPSKPNIFH 394

[Close]

BLAST of Lsi06G003670 vs. TrEMBL
Match: A0A067G2F2_CITSI (Pectinesterase OS=Citrus sinensis GN=CISIN_1g047018mg PE=4 SV=1)

HSP 1 Score: 499.2 bits (1284), Expect = 4.5e-138
Identity = 254/370 (68.65%), Postives = 292/370 (78.92%), Query Frame = 1


Query: 14  VAVALAVVQLIILILPSAVVEARTKTIPADSSKLDEWIAHNMREYNDRKANETGLK---A 73
           +A A   + LI   L    V A  K IP D+SKL+ WI  NMRE+ +RKA     K    
Sbjct: 1   MASAYFTMLLICFRLSITTVLAHPKQIPLDASKLEAWIGENMREFTERKAQLAQGKNDTV 60

Query: 74  LDRRLAKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEA 133
           +D  LA AED  R+ITVRKDGRG+F T+T+A++SIPSGN RRVVV IGGG Y EKIT+E 
Sbjct: 61  VDHVLAAAEDGFRVITVRKDGRGDFKTVTDAVKSIPSGNTRRVVVKIGGGEYWEKITVER 120

Query: 134 SKPFVTLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGT 193
           SK FVT +G     P I F+GTA  FGTV SATVAVESDYFVA N+AFVNSAPMPD    
Sbjct: 121 SKDFVTFFGDPFDMPKIVFNGTALHFGTVNSATVAVESDYFVAANVAFVNSAPMPDGKRL 180

Query: 194 GGQAVAMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKT 253
           G QAVAMRISGDKAAFH C FIG+QDTLCDD+GRHFFKDCYIQGTVDFIFGNGKSLYL+T
Sbjct: 181 GAQAVAMRISGDKAAFHNCKFIGYQDTLCDDKGRHFFKDCYIQGTVDFIFGNGKSLYLRT 240

Query: 254 TIKSVAEGTGVITAQAREEATDDSGFTFAYCNITGTGNTYLGRAWKERTRVVFAYTYMGT 313
           TI SVA G GVITAQARE+  DDSGFTF +CNITG+G+TYLGRAWKER RV+FAYTYMGT
Sbjct: 241 TIVSVANGLGVITAQAREQVNDDSGFTFVHCNITGSGDTYLGRAWKERPRVLFAYTYMGT 300

Query: 314 LINTEGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHG 373
           LIN++GW+   H SQ  K++YYGEYKCMGPGA+ SGRVK+A++LS+ EAK FLSMTY++G
Sbjct: 301 LINSQGWAAGEH-SQSHKTVYYGEYKCMGPGASSSGRVKFAKLLSEAEAKPFLSMTYLNG 360

Query: 374 NKWLLPPPDL 381
           NKWLLP P+L
Sbjct: 361 NKWLLPLPNL 369

[Close]

BLAST of Lsi06G003670 vs. TrEMBL
Match: V4UU17_9ROSI (Pectinesterase OS=Citrus clementina GN=CICLE_v10010655mg PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 1.0e-137
Identity = 254/370 (68.65%), Postives = 291/370 (78.65%), Query Frame = 1


Query: 14  VAVALAVVQLIILILPSAVVEARTKTIPADSSKLDEWIAHNMREYNDRKANETGLK---A 73
           +A A   + LI   L    V    K IP D+SKL+ WI  NMRE+ +RKA     K    
Sbjct: 1   MASAYFTMLLICFRLSITTVLGHPKQIPLDASKLEAWIGENMREFTERKAQLAQGKNDTV 60

Query: 74  LDRRLAKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEA 133
           +D  LA AED  R+ITVRKDGRG+F TIT+A++SIPSGN RRVVV IGGG Y EKIT+E 
Sbjct: 61  VDHVLAAAEDGFRVITVRKDGRGDFKTITDAVKSIPSGNTRRVVVKIGGGEYWEKITVER 120

Query: 134 SKPFVTLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGT 193
           SK FVT +G     P I F+GTA  FGTV SATVAVESDYFVA N+AFVNSAPMPD    
Sbjct: 121 SKDFVTFFGDPFDMPKIVFNGTALHFGTVNSATVAVESDYFVAANVAFVNSAPMPDGKRL 180

Query: 194 GGQAVAMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKT 253
           G QAVAMRISGDKAAFH C FIG+QDTLCDD+GRHFFKDCYIQGTVDFIFGNGKSLYL+T
Sbjct: 181 GAQAVAMRISGDKAAFHNCKFIGYQDTLCDDKGRHFFKDCYIQGTVDFIFGNGKSLYLRT 240

Query: 254 TIKSVAEGTGVITAQAREEATDDSGFTFAYCNITGTGNTYLGRAWKERTRVVFAYTYMGT 313
           TI SVA G GVITAQARE+  DDSGFTF +CNITG+G+TYLGRAWKER RV+FAYTYMGT
Sbjct: 241 TIVSVANGLGVITAQAREQVNDDSGFTFVHCNITGSGDTYLGRAWKERPRVLFAYTYMGT 300

Query: 314 LINTEGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHG 373
           LIN++GW+   H SQ  K++YYGEYKCMGPGA+ SGRVK+A++LS+ EAK FLSMTY++G
Sbjct: 301 LINSQGWAAGEH-SQSHKTVYYGEYKCMGPGASSSGRVKFAKLLSEAEAKPFLSMTYLNG 360

Query: 374 NKWLLPPPDL 381
           NKWLLP P+L
Sbjct: 361 NKWLLPLPNL 369

[Close]

BLAST of Lsi06G003670 vs. TrEMBL
Match: F6HGM2_VITVI (Pectinesterase OS=Vitis vinifera GN=VIT_11s0016g00510 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 1.1e-136
Identity = 251/368 (68.21%), Postives = 290/368 (78.80%), Query Frame = 1


Query: 14  VAVALAVVQLIILILPSAVVEARTKTIPADSSKLDEWIAHNMREYNDRK-ANETGL-KAL 73
           V   L   Q +I I   AVV  +TK IP+D+SKLD WIA N+REY  R   ++ GL  +L
Sbjct: 6   VTTLLLASQFMIFI--PAVVSDKTKHIPSDTSKLDAWIATNIREYRQRIWESKKGLHSSL 65

Query: 74  DRRLAKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEAS 133
           D  L  AE  V +I VRKDG G+F TIT+A+ SIP GN +R V+WIGGG Y EKITI+ S
Sbjct: 66  DPILVAAEAEVNVIKVRKDGTGDFKTITDALNSIPKGNLKRTVIWIGGGEYWEKITIDRS 125

Query: 134 KPFVTLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGTG 193
           KPF+TLYG     P IT+DGTA ++GTV SATVAVESDYF+AVN+AFVNSAPMPD    G
Sbjct: 126 KPFITLYGSTADMPSITYDGTAFKYGTVDSATVAVESDYFMAVNIAFVNSAPMPDGKRVG 185

Query: 194 GQAVAMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKTT 253
            QAVAMRISGDKAAFH C FIGFQDTLCDDRGRHFFKDC IQGTVDFIFG+GKSLYL T 
Sbjct: 186 AQAVAMRISGDKAAFHNCMFIGFQDTLCDDRGRHFFKDCQIQGTVDFIFGDGKSLYLNTM 245

Query: 254 IKSVAEGTGVITAQAREEATDDSGFTFAYCNITGTGNTYLGRAWKERTRVVFAYTYMGTL 313
           I+SVA+G GVITAQARE   D SGF F +CNI+G+G+TYLGRAW+ R RVVFAYTYMGTL
Sbjct: 246 IQSVAKGVGVITAQARENVADTSGFAFVHCNISGSGDTYLGRAWRLRPRVVFAYTYMGTL 305

Query: 314 INTEGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHGN 373
           IN EGWSD +H  +  K++YYGEY C GPGATPSGRVK+A++L+ EEAK FLSMTYI+GN
Sbjct: 306 INGEGWSDNLHADRD-KTVYYGEYMCEGPGATPSGRVKFAKLLTGEEAKPFLSMTYINGN 365

Query: 374 KWLLPPPD 380
           KWLLPPP+
Sbjct: 366 KWLLPPPN 370

[Close]

BLAST of Lsi06G003670 vs. TrEMBL
Match: M5VPT6_PRUPE (Pectinesterase OS=Prunus persica GN=PRUPE_ppa005976mg PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 7.3e-136
Identity = 238/363 (65.56%), Postives = 287/363 (79.06%), Query Frame = 1


Query: 18  LAVVQLIILILPSAVVEARTKTIPADSSKLDEWIAHNMREYNDRKANETGLKALDRRLAK 77
           + ++ + I+     +V      IP   S+LD WI HNMR+Y +RKA +  L+  D +L  
Sbjct: 74  ITIIMITIITTSPQLVLTHPNLIPPHLSQLDTWIVHNMRDYANRKATQVTLR-FDSKLLS 133

Query: 78  AEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEASKPFVTL 137
           AE   ++ITV+KDG G+F T+T+A+ SIPS N+RRVVV+I GG YREKI ++ S+PFVT 
Sbjct: 134 AEYAFKIITVKKDGTGDFKTVTDAVNSIPSWNKRRVVVFIDGGEYREKILVDVSRPFVTF 193

Query: 138 YGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGTGGQAVAM 197
           YG K   P ITFDGTA ++GT  SATVA+E+DYFVAVN+AFVNSAPMPD    G QAVAM
Sbjct: 194 YGDKNDVPSITFDGTALKYGTWDSATVAIEADYFVAVNIAFVNSAPMPDGKRPGAQAVAM 253

Query: 198 RISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKTTIKSVAE 257
           RISGDKAAFH C FIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYL   I SVA 
Sbjct: 254 RISGDKAAFHSCRFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLNNRIHSVAN 313

Query: 258 GTGVITAQAREEATDDSGFTFAYCNITGTGNTYLGRAWKERTRVVFAYTYMGTLINTEGW 317
           G GVITA ARE+A DDSGF F +CNITGTG+T+LGRAW++R RVVFAYTYMG+LI+++GW
Sbjct: 314 GMGVITAHAREDAADDSGFAFVHCNITGTGDTFLGRAWRDRARVVFAYTYMGSLIDSQGW 373

Query: 318 SDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHGNKWLLPP 377
           SD  H S+  K++YYGEYKCMGPG++ +GRVKYA++LSDEEAK FLSMT+I G KW+LPP
Sbjct: 374 SDAKH-SERDKTVYYGEYKCMGPGSSSTGRVKYAKMLSDEEAKPFLSMTFIRGTKWVLPP 433

Query: 378 PDL 381
           P L
Sbjct: 434 PKL 434

[Close]

BLAST of Lsi06G003670 vs. TAIR10
Match: AT5G61680.1 (AT5G61680.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 353.2 bits (905), Expect = 2.0e-97
Identity = 164/293 (55.97%), Postives = 217/293 (74.06%), Query Frame = 1


Query: 87  VRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEASKPFVTLYGQKGKRPV 146
           V+++GRG+F TITEAI S+ +GN RRV++ IG GVY+EK+TI+ SKPF+TLYG     PV
Sbjct: 45  VKQNGRGHFKTITEAINSVRAGNTRRVIIKIGPGVYKEKVTIDRSKPFITLYGHPNAMPV 104

Query: 147 ITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGTGGQAVAMRISGDKAAF 206
           +TFDGTA+++GTV SAT+ V SDYF+AVN+   NSAPMPD    G QA++MRISG+KAAF
Sbjct: 105 LTFDGTAAQYGTVDSATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAF 164

Query: 207 HECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKTTIKSVAEGTGVITAQA 266
           + C F G+QDT+CDD G HFFKDCYI+GT DFIFG+G+SLYL T +  V +G  VITA A
Sbjct: 165 YNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGSGRSLYLGTQLNVVGDGIRVITAHA 224

Query: 267 REEATDDSGFTFAYCNITGTG-NTYLGRAWKERTRVVFAYTYMGTLINTEGWSDKMHGSQ 326
            + A + SG++F +C +TGTG   YLGR+W    +VV+AYT M +++N  GW +     +
Sbjct: 225 GKSAAEKSGYSFVHCKVTGTGTGIYLGRSWMSHPKVVYAYTDMSSVVNPSGWQENREAGR 284

Query: 327 PRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHGNKWLLPPP 379
             K+++YGEYKC G G+    RVKY + + D EAK F+S+ YI G+ WLLPPP
Sbjct: 285 D-KTVFYGEYKCTGTGSHKEKRVKYTQDIDDIEAKYFISLGYIQGSSWLLPPP 336

[Close]

BLAST of Lsi06G003670 vs. TAIR10
Match: AT5G07430.1 (AT5G07430.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 352.8 bits (904), Expect = 2.7e-97
Identity = 170/364 (46.70%), Postives = 246/364 (67.58%), Query Frame = 1


Query: 16  VALAVVQLIILILPSAVVEARTKTIPADSSKLDEWIAHNMREYNDRKANETGLKALDRRL 75
           ++++VV  +++     V+   T  IP + +++ +W   N++ Y+ RK        LD  L
Sbjct: 4   ISMSVVAFLVVFASPVVLATDTDPIPENRAQIPQWFKTNVKPYSQRKGT------LDPAL 63

Query: 76  AKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEASKPFV 135
             AE   ++ITV + G  NF T+ EAI+SIP+GN+ RV++ +  GVY EK+TI+ ++PF+
Sbjct: 64  EAAEAARQIITVNQKGGANFKTLNEAIKSIPTGNKNRVIIKLAPGVYNEKVTIDIARPFI 123

Query: 136 TLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGTGGQAV 195
           TL GQ G   V+T+ GTA+++GTV+SAT+ V ++YF A +L   N+APMP   G+ GQA+
Sbjct: 124 TLLGQPGAETVLTYHGTAAQYGTVESATLIVWAEYFQAAHLTIKNTAPMPK-PGSQGQAL 183

Query: 196 AMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKTTIKSV 255
           AMRI+ DKAAF+ C F GFQDTLCDD+G HFFKDCYI+GT DFIFG G SLYL T + +V
Sbjct: 184 AMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQLHAV 243

Query: 256 AEGTGVITAQAREEATDDSGFTFAYCNITGTG-NTYLGRAWKERTRVVFAYTYMGTLINT 315
            +G  VITAQ R+ AT+ +G+TF +C +TGTG   YLGR+W    +VV+A+T M +++N 
Sbjct: 244 GDGLRVITAQGRQSATEQNGYTFVHCKVTGTGTGIYLGRSWMSHPKVVYAFTEMTSVVNP 303

Query: 316 EGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHGNKWL 375
            GW + ++     K+++YGEYKC GPG+    RV Y + +   E   FL++ YI G+ WL
Sbjct: 304 SGWRENLNRGYD-KTVFYGEYKCFGPGSHLEKRVPYTQDIDKNEVTPFLTLGYIKGSTWL 359

Query: 376 LPPP 379
           LPPP
Sbjct: 364 LPPP 359

[Close]

BLAST of Lsi06G003670 vs. TAIR10
Match: AT5G07410.1 (AT5G07410.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 337.0 bits (863), Expect = 1.5e-92
Identity = 170/366 (46.45%), Postives = 240/366 (65.57%), Query Frame = 1


Query: 16  VALAVVQLIILILPSAVVEARTKTIPADSSKLDEWIAHNMREYNDRKANETGLKALDRRL 75
           V++ +  L+I + P    +  T  IP    ++ +W   ++     RK        LD  L
Sbjct: 6   VSILLGMLVIFVSPMVFADDLTP-IPEGKPQVVQWFNTHVGPLAQRKG-------LDPAL 65

Query: 76  AKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEASKPFV 135
             AE   R+I V   G G F T+T+AI+S+P+GN +RV++ +  G YREK+TI+ +KPF+
Sbjct: 66  VAAEAAPRIINVNPKG-GEFKTLTDAIKSVPAGNTKRVIIKMAHGEYREKVTIDRNKPFI 125

Query: 136 TLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGTGGQAV 195
           TL GQ    PVIT+DGTA+++GTV SA++ + SDYF+AVN+   N+AP PD    G QA+
Sbjct: 126 TLMGQPNAMPVITYDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQAL 185

Query: 196 AMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKTTIKSV 255
           +MRISG+ AAF+ C F GFQDT+CDD G HFFKDCY++GT DFIFG+G S+YL T +  V
Sbjct: 186 SMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVV 245

Query: 256 AEGTGVITAQAREEATDDSGFTFAYCNITGT-GNTYLGRAWKERTRVVFAYTYMGTLINT 315
            +G  VI A A + A + SG++F +C +TGT G  YLGRAW    +VV+AYT M +++N 
Sbjct: 246 GDGIRVIAAHAGKSAEEKSGYSFVHCKVTGTGGGIYLGRAWMSHPKVVYAYTEMTSVVNP 305

Query: 316 EGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHGNKWL 375
            GW +    +   K+++YGEYKC GPG+  + RV + + + D+EA  FLS+ YI G+KWL
Sbjct: 306 TGWQENKTPAHD-KTVFYGEYKCSGPGSHKAKRVPFTQDIDDKEANCFLSLGYIQGSKWL 361

Query: 376 LPPPDL 381
           LPPP L
Sbjct: 366 LPPPAL 361

[Close]

BLAST of Lsi06G003670 vs. TAIR10
Match: AT5G07420.1 (AT5G07420.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 337.0 bits (863), Expect = 1.5e-92
Identity = 163/364 (44.78%), Postives = 242/364 (66.48%), Query Frame = 1


Query: 16  VALAVVQLIILILPSAVVEARTKTIPADSSKLDEWIAHNMREYNDRKANETGLKALDRRL 75
           ++LA+V L++      V+      IPAD +++ +W   N++ ++ R+        LD  L
Sbjct: 4   ISLALVALLVFFASPVVLADDITPIPADRAQIPQWFMANVKPFSQRRGT------LDPEL 63

Query: 76  AKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEASKPFV 135
             AE   R+I V ++G G+F TI  AI+SIP  N+ RV++ +  G+Y EK+T++  +P+V
Sbjct: 64  EAAEASRRVIIVNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPGIYHEKVTVDVGRPYV 123

Query: 136 TLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGTGGQAV 195
           TL G+ G    +T+ GTA+++GTV+SAT+ V +  F+A NL  +N++PMP   GT GQA+
Sbjct: 124 TLLGKPGAETNLTYAGTAAKYGTVESATLIVWATNFLAANLNIINTSPMPK-PGTQGQAL 183

Query: 196 AMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKTTIKSV 255
           AMRI+GDKAAF+ C F GFQDTLCDDRG HFFK+CYI+GT DFIFG G SLYL T + +V
Sbjct: 184 AMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGASLYLTTQLHAV 243

Query: 256 AEGTGVITAQAREEATDDSGFTFAYCNITGTG-NTYLGRAWKERTRVVFAYTYMGTLINT 315
            +G  VI A  R+  T+ +G++F +C +TG G   YLGRAW    +VV++YT M +++N 
Sbjct: 244 GDGLRVIAAHNRQSTTEQNGYSFVHCKVTGVGTGIYLGRAWMSHPKVVYSYTEMSSVVNP 303

Query: 316 EGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHGNKWL 375
            GW +    +   K+++YGEY C GPG+  + RV + + + ++EA  FL++ YI G+KWL
Sbjct: 304 SGWQENRVRAHD-KTVFYGEYMCTGPGSHKAKRVAHTQDIDNKEASQFLTLGYIKGSKWL 359

Query: 376 LPPP 379
           LPPP
Sbjct: 364 LPPP 359

[Close]

BLAST of Lsi06G003670 vs. TAIR10
Match: AT1G69940.1 (AT1G69940.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 335.9 bits (860), Expect = 3.4e-92
Identity = 169/366 (46.17%), Postives = 240/366 (65.57%), Query Frame = 1


Query: 16  VALAVVQLIILILPSAVVEARTKTIPADSSKLDEWIAHNMREYNDRKANETGLKALDRRL 75
           V++ +  L++ + P    +  T  IP    ++ +W   N+     RK        LD  L
Sbjct: 6   VSILLGLLMVFVTPMVFADDVTP-IPEGKPQVAQWFNANVGPLAQRKG-------LDPAL 65

Query: 76  AKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEASKPFV 135
             AE   R+I V   G G F T+T+AI+S+P+GN +RV++ +  G Y+EK+TI+ +KPF+
Sbjct: 66  VAAEAAPRIINVNPKG-GEFKTLTDAIKSVPAGNTKRVIIKMAPGEYKEKVTIDRNKPFI 125

Query: 136 TLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGTGGQAV 195
           TL GQ    PVIT+DGTA+++GTV SA++ + SDYF+AVN+   N+AP PD    G QA+
Sbjct: 126 TLMGQPNAMPVITYDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQAL 185

Query: 196 AMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKTTIKSV 255
           +MRISG+ AAF+ C F GFQDT+CDD G HFFKDCY++GT DFIFG+G S+YL T +  V
Sbjct: 186 SMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTSMYLGTQLHVV 245

Query: 256 AEGTGVITAQAREEATDDSGFTFAYCNITGT-GNTYLGRAWKERTRVVFAYTYMGTLINT 315
            +G  VI A A + A + SG++F +C +TGT G  YLGRAW    +VV+AYT M +++N 
Sbjct: 246 GDGIRVIAAHAGKSAEEKSGYSFVHCKVTGTGGGIYLGRAWMSHPKVVYAYTEMTSVVNP 305

Query: 316 EGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHGNKWL 375
            GW +    +   K+++YGEYKC GPG+  + RV + + + D+EA  FLS+ YI G+KWL
Sbjct: 306 TGWQENKTPAHD-KTVFYGEYKCSGPGSHKAKRVPFTQDIDDKEANRFLSLGYIQGSKWL 361

Query: 376 LPPPDL 381
           LPPP L
Sbjct: 366 LPPPAL 361

[Close]

BLAST of Lsi06G003670 vs. NCBI nr
Match: gi|659100175|ref|XP_008450966.1| (PREDICTED: putative pectinesterase 63 [Cucumis melo])

HSP 1 Score: 724.5 bits (1869), Expect = 9.6e-206
Identity = 365/394 (92.64%), Postives = 377/394 (95.69%), Query Frame = 1


Query: 1   MSRPTVASSFPATVAVALAVV-QLIILI-LPSAV-VEARTKTIPADSSKLDEWIAHNMRE 60
           M RPTVASSF ATVA+ALAV+ QLIILI +PS V VEARTKTIPADSSKLDEWIAHNMRE
Sbjct: 1   MFRPTVASSFSATVALALAVMFQLIILITIPSTVLVEARTKTIPADSSKLDEWIAHNMRE 60

Query: 61  YNDRKANETGLKALDRRLAKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWI 120
           YNDRK NETG+KALDRRLA+AED VRLITVRKDGRGNF+TITEAIESIPSGNRRRVVVWI
Sbjct: 61  YNDRKMNETGIKALDRRLAEAEDCVRLITVRKDGRGNFSTITEAIESIPSGNRRRVVVWI 120

Query: 121 GGGVYREKITIEASKPFVTLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLA 180
           GGGVYREKITI+ASKPFVTLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNL 
Sbjct: 121 GGGVYREKITIDASKPFVTLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLT 180

Query: 181 FVNSAPMPDLGGTGGQAVAMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVD 240
           FVNSAPMP+LGGTGGQAVAMRISGDKAAFHECHFIGFQDTLCDDRGRHFF+DCYIQGTVD
Sbjct: 181 FVNSAPMPELGGTGGQAVAMRISGDKAAFHECHFIGFQDTLCDDRGRHFFRDCYIQGTVD 240

Query: 241 FIFGNGKSLYLKTTIKSVAEGTGVITAQAREEATDDSGFTFAYCNITGTGNTYLGRAWKE 300
           FIFGNGKSLYLKTTI SVAEG GVITAQARE+ATD+SGFTFAYCNITGTGNTYLGRAWKE
Sbjct: 241 FIFGNGKSLYLKTTINSVAEGIGVITAQAREDATDESGFTFAYCNITGTGNTYLGRAWKE 300

Query: 301 RTRVVFAYTYMGTLINTEGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDE 360
           RTRVVFAYTYMGTLINTEGWSDKMHGSQPRKSMYYGEYKC GPGAT SGRVKYARILSD 
Sbjct: 301 RTRVVFAYTYMGTLINTEGWSDKMHGSQPRKSMYYGEYKCKGPGATSSGRVKYARILSDV 360

Query: 361 EAKAFLSMTYIHGNKWLLPPPDLSLSHSQPNFFH 392
           EAKAFLSMTYIHGNKWLLPPPDLS S S+PN FH
Sbjct: 361 EAKAFLSMTYIHGNKWLLPPPDLSFSPSKPNIFH 394

[Close]

BLAST of Lsi06G003670 vs. NCBI nr
Match: gi|449452614|ref|XP_004144054.1| (PREDICTED: putative pectinesterase 63 [Cucumis sativus])

HSP 1 Score: 719.5 bits (1856), Expect = 3.1e-204
Identity = 359/394 (91.12%), Postives = 376/394 (95.43%), Query Frame = 1


Query: 1   MSRPTVASSFPATVAVALAVV-QLIILIL-PSA-VVEARTKTIPADSSKLDEWIAHNMRE 60
           M RPTVASSFPATVA A+ V+ QLIILI+ PS  VVEA TKTIPADSSKLDEWI HNM+E
Sbjct: 1   MFRPTVASSFPATVAFAMGVMLQLIILIIIPSTVVVEAHTKTIPADSSKLDEWIGHNMKE 60

Query: 61  YNDRKANETGLKALDRRLAKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWI 120
           YNDRK NETG+KALDRRLA+AED V+LITVRKDGRGNF+TITEAI+SIPSGNRRRVVVWI
Sbjct: 61  YNDRKTNETGIKALDRRLAEAEDCVQLITVRKDGRGNFSTITEAIDSIPSGNRRRVVVWI 120

Query: 121 GGGVYREKITIEASKPFVTLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLA 180
           GGGVYREKITI+ASKPFVTLYGQKGKRP+ITFDGTASEFGTVKSATVAVESDYFVAVNL 
Sbjct: 121 GGGVYREKITIDASKPFVTLYGQKGKRPMITFDGTASEFGTVKSATVAVESDYFVAVNLT 180

Query: 181 FVNSAPMPDLGGTGGQAVAMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVD 240
           FVNSAPMP+LGGTGGQAVAMRISGDKAAFH CHFIGFQDTLCDDRGRHFFKDCY+QGTVD
Sbjct: 181 FVNSAPMPELGGTGGQAVAMRISGDKAAFHGCHFIGFQDTLCDDRGRHFFKDCYVQGTVD 240

Query: 241 FIFGNGKSLYLKTTIKSVAEGTGVITAQAREEATDDSGFTFAYCNITGTGNTYLGRAWKE 300
           FIFGNGKSLYLKTTI SVAEGTGVITAQARE+ATD+SGFTFAYCNITGTG+TYLGRAWKE
Sbjct: 241 FIFGNGKSLYLKTTINSVAEGTGVITAQAREDATDESGFTFAYCNITGTGDTYLGRAWKE 300

Query: 301 RTRVVFAYTYMGTLINTEGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDE 360
           RTRVVFAYTYMGTLINTEGWSDKMHGSQPRKSMYYGEYKC GPGATPSGRVKYARILSD 
Sbjct: 301 RTRVVFAYTYMGTLINTEGWSDKMHGSQPRKSMYYGEYKCKGPGATPSGRVKYARILSDV 360

Query: 361 EAKAFLSMTYIHGNKWLLPPPDLSLSHSQPNFFH 392
           EAKAFLSMTYIHGNKWLLPPPDLSLS S+PN FH
Sbjct: 361 EAKAFLSMTYIHGNKWLLPPPDLSLSPSKPNIFH 394

[Close]

BLAST of Lsi06G003670 vs. NCBI nr
Match: gi|1009173178|ref|XP_015867676.1| (PREDICTED: putative pectinesterase 63 [Ziziphus jujuba])

HSP 1 Score: 513.8 bits (1322), Expect = 2.6e-142
Identity = 245/369 (66.40%), Postives = 302/369 (81.84%), Query Frame = 1


Query: 12  ATVAVALAVVQLIILILPSAVVEARTKTIPADSSKLDEWIAHNMREYNDRKANETGLKAL 71
           +T+ +A AV  ++++I   +V   + + IP+D +KLDEWIA NM++Y +RKA + G  +L
Sbjct: 5   STMLLAGAVALVVVVIQIPSVYCGKARLIPSDRTKLDEWIAVNMKDYVERKAKQ-GNSSL 64

Query: 72  DRRLAKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEAS 131
           D +LAKAED V+++ VRKDG G+F T+T+A++SIP GN +RVVVWIGGG Y EKIT++ S
Sbjct: 65  DIKLAKAEDSVKIVKVRKDGTGDFNTVTDAVKSIPKGNTQRVVVWIGGGEYVEKITVDVS 124

Query: 132 KPFVTLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGTG 191
           KPF+T YG K   P I F+GTA ++GT+ SATV +ESDYFVA N+AFVNSAPMPD    G
Sbjct: 125 KPFLTFYGDKDDMPTIVFNGTAFQYGTLNSATVEIESDYFVAANIAFVNSAPMPDGKRVG 184

Query: 192 GQAVAMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKTT 251
            QAVAMRISGDKAAFH C FIGFQDTLCDD+GRHFF+DC+IQGTVDFIFGNGKSLYL T+
Sbjct: 185 AQAVAMRISGDKAAFHNCRFIGFQDTLCDDKGRHFFRDCHIQGTVDFIFGNGKSLYLNTS 244

Query: 252 IKSVAEGTGVITAQAREEATDDSGFTFAYCNITGTGNTYLGRAWKERTRVVFAYTYMGTL 311
           I SVA+G GVITAQARE+ +DDSGFTF +CNITGTG+TYLGRAWKE  RVVFAYT+MGTL
Sbjct: 245 IISVAKGMGVITAQAREDVSDDSGFTFVHCNITGTGDTYLGRAWKECPRVVFAYTFMGTL 304

Query: 312 INTEGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHGN 371
           IN++GWS+ MH  +   ++YYGEYKC GPGA+  GRV YA+ LSDEEA+ FLSMTY+HGN
Sbjct: 305 INSQGWSNNMHKDRNETTVYYGEYKCKGPGASTKGRVNYAKTLSDEEAQPFLSMTYLHGN 364

Query: 372 KWLLPPPDL 381
           KW+LPPP L
Sbjct: 365 KWILPPPKL 372

[Close]

BLAST of Lsi06G003670 vs. NCBI nr
Match: gi|641855005|gb|KDO73799.1| (hypothetical protein CISIN_1g047018mg [Citrus sinensis])

HSP 1 Score: 499.2 bits (1284), Expect = 6.5e-138
Identity = 254/370 (68.65%), Postives = 292/370 (78.92%), Query Frame = 1


Query: 14  VAVALAVVQLIILILPSAVVEARTKTIPADSSKLDEWIAHNMREYNDRKANETGLK---A 73
           +A A   + LI   L    V A  K IP D+SKL+ WI  NMRE+ +RKA     K    
Sbjct: 1   MASAYFTMLLICFRLSITTVLAHPKQIPLDASKLEAWIGENMREFTERKAQLAQGKNDTV 60

Query: 74  LDRRLAKAEDHVRLITVRKDGRGNFTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEA 133
           +D  LA AED  R+ITVRKDGRG+F T+T+A++SIPSGN RRVVV IGGG Y EKIT+E 
Sbjct: 61  VDHVLAAAEDGFRVITVRKDGRGDFKTVTDAVKSIPSGNTRRVVVKIGGGEYWEKITVER 120

Query: 134 SKPFVTLYGQKGKRPVITFDGTASEFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGT 193
           SK FVT +G     P I F+GTA  FGTV SATVAVESDYFVA N+AFVNSAPMPD    
Sbjct: 121 SKDFVTFFGDPFDMPKIVFNGTALHFGTVNSATVAVESDYFVAANVAFVNSAPMPDGKRL 180

Query: 194 GGQAVAMRISGDKAAFHECHFIGFQDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKT 253
           G QAVAMRISGDKAAFH C FIG+QDTLCDD+GRHFFKDCYIQGTVDFIFGNGKSLYL+T
Sbjct: 181 GAQAVAMRISGDKAAFHNCKFIGYQDTLCDDKGRHFFKDCYIQGTVDFIFGNGKSLYLRT 240

Query: 254 TIKSVAEGTGVITAQAREEATDDSGFTFAYCNITGTGNTYLGRAWKERTRVVFAYTYMGT 313
           TI SVA G GVITAQARE+  DDSGFTF +CNITG+G+TYLGRAWKER RV+FAYTYMGT
Sbjct: 241 TIVSVANGLGVITAQAREQVNDDSGFTFVHCNITGSGDTYLGRAWKERPRVLFAYTYMGT 300

Query: 314 LINTEGWSDKMHGSQPRKSMYYGEYKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHG 373
           LIN++GW+   H SQ  K++YYGEYKCMGPGA+ SGRVK+A++LS+ EAK FLSMTY++G
Sbjct: 301 LINSQGWAAGEH-SQSHKTVYYGEYKCMGPGASSSGRVKFAKLLSEAEAKPFLSMTYLNG 360

Query: 374 NKWLLPPPDL 381
           NKWLLP P+L
Sbjct: 361 NKWLLPLPNL 369

[Close]

BLAST of Lsi06G003670 vs. NCBI nr
Match: gi|694431969|ref|XP_009343360.1| (PREDICTED: putative pectinesterase 63 [Pyrus x bretschneideri])

HSP 1 Score: 498.8 bits (1283), Expect = 8.5e-138
Identity = 244/346 (70.52%), Postives = 282/346 (81.50%), Query Frame = 1


Query: 35  ARTKTIPADSSKLDEWIAHNMREYNDRKANETGLKALDRRLAKAEDHVRLITVRKDGRGN 94
           +R   IP + S+LD WIAHNMR Y +RKA +  L+  D +L  AE+ VR+ITVRKDG G 
Sbjct: 23  SRPNLIPPNFSQLDSWIAHNMRGYTNRKATQATLR-FDAQLLSAEEIVRIITVRKDGTGQ 82

Query: 95  FTTITEAIESIPSGNRRRVVVWIGGGVYREKITIEASKPFVTLYGQKGKRPVITFDGTAS 154
           F T+T+A+ SIPSGN RRVVV+IGGGVY EKI ++ASKPFVT YG +   P ITFDGTA 
Sbjct: 83  FRTVTDAVNSIPSGNTRRVVVFIGGGVYTEKILVDASKPFVTFYGDQNDVPSITFDGTAL 142

Query: 155 EFGTVKSATVAVESDYFVAVNLAFVNSAPMPDLGGTGGQAVAMRISGDKAAFHECHFIGF 214
           ++GT  S+TVAVESDYFVAVN+AFVNSAPMPD    G QAVAMRISGDKAAFH C FIGF
Sbjct: 143 KYGTWNSSTVAVESDYFVAVNIAFVNSAPMPDGIRPGAQAVAMRISGDKAAFHNCRFIGF 202

Query: 215 QDTLCDDRGRHFFKDCYIQGTVDFIFGNGKSLYLKTTIKSVAEGTGVITAQAREEATDDS 274
           QDTL DDRGRHFFKDC+IQGTVDFIFGNGKSLYL  TI SVA G GVITA AR    DDS
Sbjct: 203 QDTLLDDRGRHFFKDCHIQGTVDFIFGNGKSLYLNNTIHSVANGMGVITAHARANVEDDS 262

Query: 275 GFTFAYCNITGTGNTYLGRAWKERTRVVFAYTYMGTLINTEGWSDKMHGSQPRKSMYYGE 334
           GF F +CNITGTG+T+LGRAW+ER RVVFAYTYMG+LI+ +GWSD MH ++  K++YYGE
Sbjct: 263 GFAFVHCNITGTGDTFLGRAWRERPRVVFAYTYMGSLIDKQGWSDYMH-TERDKTVYYGE 322

Query: 335 YKCMGPGATPSGRVKYARILSDEEAKAFLSMTYIHGNKWLLPPPDL 381
           YKCMGPG++ SGRVKYAR+LSDEEAK FLS+T+I G KW+LPPP L
Sbjct: 323 YKCMGPGSSSSGRVKYARMLSDEEAKPFLSLTFIKGTKWVLPPPKL 366

The following BLAST results are available for this feature:

BLAST of Lsi06G003670 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PME63_ARATH	3.6e-96	55.97	Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2	[more]
PME50_ARATH	4.7e-96	46.70	Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1	[more]
PME48_ARATH	2.7e-91	46.45	Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2	[more]
PME49_ARATH	2.7e-91	44.78	Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1	[more]
PPME1_ARATH	6.0e-91	46.17	Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1	[more]

BLAST of Lsi06G003670 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M299_CUCSA	2.1e-204	91.12	Pectinesterase OS=Cucumis sativus GN=Csa_1G597780 PE=4 SV=1	[more]
A0A067G2F2_CITSI	4.5e-138	68.65	Pectinesterase OS=Citrus sinensis GN=CISIN_1g047018mg PE=4 SV=1	[more]
V4UU17_9ROSI	1.0e-137	68.65	Pectinesterase OS=Citrus clementina GN=CICLE_v10010655mg PE=4 SV=1	[more]
F6HGM2_VITVI	1.1e-136	68.21	Pectinesterase OS=Vitis vinifera GN=VIT_11s0016g00510 PE=4 SV=1	[more]
M5VPT6_PRUPE	7.3e-136	65.56	Pectinesterase OS=Prunus persica GN=PRUPE_ppa005976mg PE=4 SV=1	[more]

BLAST of Lsi06G003670 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G61680.1	2.0e-97	55.97	Pectin lyase-like superfamily protein	[more]
AT5G07430.1	2.7e-97	46.70	Pectin lyase-like superfamily protein	[more]
AT5G07410.1	1.5e-92	46.45	Pectin lyase-like superfamily protein	[more]
AT5G07420.1	1.5e-92	44.78	Pectin lyase-like superfamily protein	[more]
AT1G69940.1	3.4e-92	46.17	Pectin lyase-like superfamily protein	[more]

BLAST of Lsi06G003670 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659100175\|ref\|XP_008450966.1\|	9.6e-206	92.64	PREDICTED: putative pectinesterase 63 [Cucumis melo]	[more]
gi\|449452614\|ref\|XP_004144054.1\|	3.1e-204	91.12	PREDICTED: putative pectinesterase 63 [Cucumis sativus]	[more]
gi\|1009173178\|ref\|XP_015867676.1\|	2.6e-142	66.40	PREDICTED: putative pectinesterase 63 [Ziziphus jujuba]	[more]
gi\|641855005\|gb\|KDO73799.1\|	6.5e-138	68.65	hypothetical protein CISIN_1g047018mg [Citrus sinensis]	[more]
gi\|694431969\|ref\|XP_009343360.1\|	8.5e-138	70.52	PREDICTED: putative pectinesterase 63 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0042545	cell wall modification

Vocabulary: **Molecular Function**
Term	Definition
GO:0030599	pectinesterase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0005618	cell wall

Vocabulary: **INTERPRO**
Term	Definition
IPR012334	Pectin_lyas_fold
IPR011050	Pectin_lyase_fold/virulence
IPR000070	Pectinesterase_cat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0045490	pectin catabolic process
biological_process	GO:0005982	starch metabolic process
biological_process	GO:0005985	sucrose metabolic process
cellular_component	GO:0005618	cell wall
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0030599	pectinesterase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G003670.1	Lsi06G003670.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 85..371 score: 2.0
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 84..375 score: 2.09
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 85..375 score: 5.8E
None	No IPR available	PANTHER	PTHR31321	FAMILY NOT NAMED	coord: 1..380 score: 3.5E
None	No IPR available	PANTHER	PTHR31321:SF30	SUBFAMILY NOT NAMED	coord: 1..380 score: 3.5E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi06G003670	Cucumber (Gy14) v1	cgylsiB230
Lsi06G003670	Cucurbita maxima (Rimu)	cmalsiB063
Lsi06G003670	Cucurbita maxima (Rimu)	cmalsiB128
Lsi06G003670	Cucurbita moschata (Rifu)	cmolsiB050
Lsi06G003670	Cucurbita moschata (Rifu)	cmolsiB118
Lsi06G003670	Cucurbita pepo (Zucchini)	cpelsiB305
Lsi06G003670	Cucurbita pepo (Zucchini)	cpelsiB563
Lsi06G003670	Wild cucumber (PI 183967)	cpilsiB059
Lsi06G003670	Cucumber (Chinese Long) v2	culsiB058
Lsi06G003670	Melon (DHL92) v3.5.1	lsimeB396
Lsi06G003670	Watermelon (Charleston Gray)	lsiwcgB364
Lsi06G003670	Watermelon (97103) v1	lsiwmB396
Lsi06G003670	Cucumber (Gy14) v2	cgyblsiB055
Lsi06G003670	Melon (DHL92) v3.6.1	lsimedB418
Lsi06G003670	Silver-seed gourd	carlsiB086
Lsi06G003670	Silver-seed gourd	carlsiB452
Lsi06G003670	Cucumber (Chinese Long) v3	cuclsiB068
Lsi06G003670	Watermelon (97103) v2	lsiwmbB365
Lsi06G003670	Wax gourd	lsiwgoB517