Lsi06G003010 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi06G003010
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr06 : 3459730 .. 3460267 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAGGGACATGCGCACACCAGGAGTTCGAATTTTGTTGAACCCCATACCAGAACTTTGAGCATTCCTTACCATAAATGCATTATTCTTTCCTTGAATGATCACTTCCATGGAAAATTAATGTCAGATTCTGGCGTGGAGGATCTGAATTCAAAGGAGGAAGACAGGCTAGCAGCAGACAACTGGTGGCTCTCCATCATGAAGCTGAGGTGCCGTGGACGTTGGACAATTCTTACGAGTGCAATATGGATGCAGCAATCATCTGTCAGAAACTCTCATGCAGGAAGACGATGTCGGAGCGTTTTATAACTTCAAATGGTGGTGTTGTGCTTAAGGTCAGTCTCCACCCGATTTGGGGTGGCGGATTCTTTGATTCTTTAGAAATTGCTTTCAGTAAAGAATCAGTTTTCAACGTGCTACAACCTATCGTTGATGTCCTGCTAGATAAACAACGAAGTGGGATGATAGAAGGTTTCCTCACAAATCAAAGATGCAACCAAACTGCTCATAATCTGGCAAGCCATGTTAGACCATGA

mRNA sequence

ATGTCAAGGGACATGCGCACACCAGGAGTTCGAATTTTATTCTGGCGTGGAGGATCTGAATTCAAAGGAGGAAGACAGGCTAGCAGCAGACAACTGGTGGCTCTCCATCATGAAGCTGAGGTGCCGTGGACGTTGGACAATTCTTACGAGTGCAATATGGATGCAGCAATCATCTGTCAGAAACTCTCATGCAGGAAGACGATGTCGGAGCGTTTTATAACTTCAAATGGTGGTGTTGTGCTTAAGGTCAGTCTCCACCCGATTTGGGGTGGCGGATTCTTTGATTCTTTAGAAATTGCTTTCAGTAAAGAATCAGTTTTCAACGTGCTACAACCTATCGTTGATGTCCTGCTAGATAAACAACGAAGTGGGATGATAGAAGGTTTCCTCACAAATCAAAGATGCAACCAAACTGCTCATAATCTGGCAAGCCATGTTAGACCATGA

Coding sequence (CDS)

ATGTCAAGGGACATGCGCACACCAGGAGTTCGAATTTTATTCTGGCGTGGAGGATCTGAATTCAAAGGAGGAAGACAGGCTAGCAGCAGACAACTGGTGGCTCTCCATCATGAAGCTGAGGTGCCGTGGACGTTGGACAATTCTTACGAGTGCAATATGGATGCAGCAATCATCTGTCAGAAACTCTCATGCAGGAAGACGATGTCGGAGCGTTTTATAACTTCAAATGGTGGTGTTGTGCTTAAGGTCAGTCTCCACCCGATTTGGGGTGGCGGATTCTTTGATTCTTTAGAAATTGCTTTCAGTAAAGAATCAGTTTTCAACGTGCTACAACCTATCGTTGATGTCCTGCTAGATAAACAACGAAGTGGGATGATAGAAGGTTTCCTCACAAATCAAAGATGCAACCAAACTGCTCATAATCTGGCAAGCCATGTTAGACCATGA

Protein sequence

MSRDMRTPGVRILFWRGGSEFKGGRQASSRQLVALHHEAEVPWTLDNSYECNMDAAIICQKLSCRKTMSERFITSNGGVVLKVSLHPIWGGGFFDSLEIAFSKESVFNVLQPIVDVLLDKQRSGMIEGFLTNQRCNQTAHNLASHVRP
Homology
The following BLAST results are available for this feature:
BLAST of Lsi06G003010 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi06G003010 vs. TrEMBL
Match NameE-valueIdentityDescription
BLAST of Lsi06G003010 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Lsi06G003010 vs. NCBI nr
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G003010.1Lsi06G003010.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi06G003010Bottle gourd (USVL1VR-Ls)lsilsiB059
Lsi06G003010Bottle gourd (USVL1VR-Ls)lsilsiB114
Lsi06G003010Bottle gourd (USVL1VR-Ls)lsilsiB141
Lsi06G003010Cucumber (Gy14) v1cgylsiB164
Lsi06G003010Cucumber (Gy14) v1cgylsiB247
Lsi06G003010Cucumber (Gy14) v1cgylsiB579
Lsi06G003010Cucurbita maxima (Rimu)cmalsiB063
Lsi06G003010Cucurbita maxima (Rimu)cmalsiB128
Lsi06G003010Cucurbita maxima (Rimu)cmalsiB179
Lsi06G003010Cucurbita maxima (Rimu)cmalsiB358
Lsi06G003010Cucurbita maxima (Rimu)cmalsiB444
Lsi06G003010Cucurbita maxima (Rimu)cmalsiB445
Lsi06G003010Cucurbita maxima (Rimu)cmalsiB732
Lsi06G003010Cucurbita maxima (Rimu)cmalsiB843
Lsi06G003010Cucurbita moschata (Rifu)cmolsiB050
Lsi06G003010Cucurbita moschata (Rifu)cmolsiB118
Lsi06G003010Cucurbita moschata (Rifu)cmolsiB169
Lsi06G003010Cucurbita moschata (Rifu)cmolsiB347
Lsi06G003010Cucurbita moschata (Rifu)cmolsiB828
Lsi06G003010Cucurbita pepo (Zucchini)cpelsiB093
Lsi06G003010Cucurbita pepo (Zucchini)cpelsiB125
Lsi06G003010Cucurbita pepo (Zucchini)cpelsiB305
Lsi06G003010Cucurbita pepo (Zucchini)cpelsiB563
Lsi06G003010Wild cucumber (PI 183967)cpilsiB059
Lsi06G003010Wild cucumber (PI 183967)cpilsiB133
Lsi06G003010Wild cucumber (PI 183967)cpilsiB299
Lsi06G003010Wild cucumber (PI 183967)cpilsiB543
Lsi06G003010Cucumber (Chinese Long) v2culsiB058
Lsi06G003010Cucumber (Chinese Long) v2culsiB134
Lsi06G003010Cucumber (Chinese Long) v2culsiB299
Lsi06G003010Cucumber (Chinese Long) v2culsiB528
Lsi06G003010Melon (DHL92) v3.5.1lsimeB393
Lsi06G003010Melon (DHL92) v3.5.1lsimeB396
Lsi06G003010Melon (DHL92) v3.5.1lsimeB414
Lsi06G003010Melon (DHL92) v3.5.1lsimeB423
Lsi06G003010Watermelon (Charleston Gray)lsiwcgB355
Lsi06G003010Watermelon (Charleston Gray)lsiwcgB364
Lsi06G003010Watermelon (Charleston Gray)lsiwcgB381
Lsi06G003010Watermelon (97103) v1lsiwmB386
Lsi06G003010Watermelon (97103) v1lsiwmB396
Lsi06G003010Watermelon (97103) v1lsiwmB411
Lsi06G003010Cucumber (Gy14) v2cgyblsiB055
Lsi06G003010Cucumber (Gy14) v2cgyblsiB123
Lsi06G003010Cucumber (Gy14) v2cgyblsiB276
Lsi06G003010Cucumber (Gy14) v2cgyblsiB501
Lsi06G003010Melon (DHL92) v3.6.1lsimedB415
Lsi06G003010Melon (DHL92) v3.6.1lsimedB418
Lsi06G003010Melon (DHL92) v3.6.1lsimedB437
Lsi06G003010Melon (DHL92) v3.6.1lsimedB445
Lsi06G003010Silver-seed gourdcarlsiB086
Lsi06G003010Silver-seed gourdcarlsiB519
Lsi06G003010Silver-seed gourdcarlsiB547
Lsi06G003010Silver-seed gourdcarlsiB806
Lsi06G003010Silver-seed gourdcarlsiB817
Lsi06G003010Silver-seed gourdcarlsiB938
Lsi06G003010Cucumber (Chinese Long) v3cuclsiB068
Lsi06G003010Cucumber (Chinese Long) v3cuclsiB145
Lsi06G003010Cucumber (Chinese Long) v3cuclsiB319
Lsi06G003010Cucumber (Chinese Long) v3cuclsiB564
Lsi06G003010Watermelon (97103) v2lsiwmbB359
Lsi06G003010Watermelon (97103) v2lsiwmbB365
Lsi06G003010Watermelon (97103) v2lsiwmbB386
Lsi06G003010Wax gourdlsiwgoB478
Lsi06G003010Wax gourdlsiwgoB496
Lsi06G003010Wax gourdlsiwgoB499
Lsi06G003010Wax gourdlsiwgoB517